Rh6AG173600

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000074
Physical Location & Seq
Reverse (-)
28100434 .. 28114185
13752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG173600.1

Sequence Viewer

Length: 1833 bp
ATGTATTCCTTGACGGTGAAGCCCTCTTTTCTTCTTGTACCAAAATCTTCTTCTTCTTCATCATCTGCTCATTCTTGGGTTGGGTCTTCTTCTTCTACGGTTAGTTTCCCAATAAAGACCAAAAGCAGGGGCAGCAGAATCAGTTTGAGAATTGCGGCTTACGATTCTTCCAAGAACAACGATGGGCTCAACTCCGGTGATTCCAAACCTCCCAACGGCACTGTGCCAAAGAGCAGGAGGGATATACTATTGGAGTATGTAAAAAATGTGCAGCCTGAATTTATGGAGCTGTTTGTAAAGAGAGCACCCCAGCAGGTGGTTGATGCAATGCGCCAAACTGTGACAAACATGATTGGAACACTACCCCCACAATTTTTTACAGTCAGTGTCCACAGTTGCCGAAAATCTTGCACAACTTATTACAGGTTGGAACTGCAGCAAAGTTTAGAGCCAGTTGCTCTTCCTGAAGGGCAAGAGAAAAAGGATGCACCAGAGTATGCACCTGGTACACAGAAGTCGAATGTGTCAGGGGAAGTTATTAGGTGGAATAATGTTTCTGGCCCTGAGAAAATAGATGCTAAGAAGTACATAGAGTTACTTGAAGCAGAGATTGAGGAATTGAATAATGAAGTTGGTAGGAAATCTGCAAATGGACAAAATGAATTGTTGGAGTATCTCAAGTCTCTCGAGCCCCAAAATTTAAAGGAATTGACTAGTACTGCTGGAGACGATGTTGTGGTTGCAATGGATACATTCATCAAGCGGCTTTTGGCTGTTTCAGATCCTAGCCAAATGAAGTATGACAAACTAGAACGTCGTTGGTGCGTTGAATATCGAGGCAACAATGGTAATCCCGAGTGGTTATGCTCGTGCAAGATGTATGAATCCGATGGCATTCCTTGTGCTCATCTGTTCAGTGTTATGAAAGCGGAGTTGGTTACAGAATTTCCAAACTGTCTGATTATGAAGCGATGGACACGTTCAATTGCCGAAACTACTATAGCCCCTTCGCTTTCCCATATGTCAAATGATCAGTCTGCCCAATGTGCACGGTATGCTGCCCTCCTAGGTGAAGCTGCAGAAGCCTGTTTAAATTACTCCAACTCCAGTGAAAGCTTCAATGCTGCAATGATCGAACTTCAAACCTTCAAATCTAAATCTATGCAATACCATGAAGTTGGGGAAAAAAACTTTCCTAACCGTACAGAGACTCCAAGTGTTGTGAAGGACCCGTTGATGTCAAGAACGAAGGGAATGCCGTGCAATACACAAGGACGCACCGATAGTCAAATCAAGAAAAGTGTCATTACATGCGGACAATGTCATCAGATTGGTCACAACAGGCGGACATGCAAAGTACATGAAGATCGATTTGAGATAATTGGTACAGGGGACGGACAATCTCCAGTCATTGATACTGCTGCAGCCGTTCGTCAAGAATGGGAACCATCAATTCCAGAATTTTCTCCTGCAGGGAGTGATCACATTTCAACTCCTTCCAGCCCATGTTTACCTACAAACATGTCGCAGGGTGTCCTTGTGCAACCAAAACCGTCCATATCATTCAGGTTATATGAGAAAAGTGTATCAATTTATGTCTACTCCAACAATGATGTTTTACTGAATCTTCAGTCTCAAACTGAGAAAAGGGTGTTGATAATTTCATCAAAGGTGCCTGACGTTTGCGTGGCTCGTACTCAAATGGAAAATATGGTTTTTGAAATTGTCAGCCTTGATGTTGTTGATGATACTATTCAGCATGATGATAAAAGTGGCCAATTACATATAGCTACAATAATGGGCGGTTCATCATCCATGGAGGAATCCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

610

Amino Acids

67.71

Weight (kDa)

6.08

Isoelectric Point (pI)

55.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 83 - 134 1.5e-07 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 304
Acc36I ACCTGC 1 cut(s) 304
AccB1I GGYRCC 1 cut(s) 1672
AccB7I CCANNNNNTGG 1 cut(s) 316
AccI GTMKAC 1 cut(s) 1599
AciI CCGC 6 cut(s) 155, 763, 929, 1314, 1345, 1803
AclWI GGATC 1 cut(s) 776
AcoI YGGCCR 1 cut(s) 1774
AcsI RAATTY 4 cut(s) 278, 697, 944, 1460
AcuI CTGAAG 2 cut(s) 486, 1613
AfaI GTAC 8 cut(s) 39, 508, 587, 718, 1204, 1359, 1387, 1696
AfiI CCNNNNNNNGG 3 cut(s) 126, 215, 316
AflIII ACRYGT 2 cut(s) 977, 1521
AgsI TTSAA 9 cut(s) 602, 622, 830, 984, 1120, 1142, 1150, 1491, 1721
AhlI ACTAGT 1 cut(s) 713
AjnI CCWGG 1 cut(s) 502
AjuI GAANNNNNNNTTGG 4 cut(s) 34, 66, 917, 949
AluBI AGCT 4 cut(s) 289, 1076, 1116, 1790
AluI AGCT 4 cut(s) 289, 1076, 1116, 1790
Alw21I GWGCWC 3 cut(s) 307, 907, 1051
Alw26I GTCTC 4 cut(s) 687, 720, 1202, 1638
Alw44I GTGCAC 1 cut(s) 1047
AlwI GGATC 1 cut(s) 776
Ama87I CYCGRG 2 cut(s) 686, 854
AoxI GGCC 2 cut(s) 559, 1774
ApaLI GTGCAC 1 cut(s) 1047
ApeKI GCWGC 8 cut(s) 132, 271, 436, 1058, 1076, 1124, 1421, 1424
ApoI RAATTY 4 cut(s) 278, 697, 944, 1460
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
AspA2I CCTAGG 1 cut(s) 1066
AspLEI GCGC 1 cut(s) 333
AspS9I GGNCC 2 cut(s) 560, 1228
AsuHPI GGTGA 3 cut(s) 28, 209, 1082
AvaI CYCGRG 2 cut(s) 686, 854
AvaII GGWCC 1 cut(s) 1228
AvrII CCTAGG 1 cut(s) 1066
BaeGI GKGCMC 1 cut(s) 1051
BalI TGGCCA 1 cut(s) 1776
BanI GGYRCC 1 cut(s) 1672
BanII GRGCYC 2 cut(s) 189, 693
BauI CACGAG 1 cut(s) 868
BbsI GAAGAC 1 cut(s) 78
Bbv12I GWGCWC 3 cut(s) 307, 907, 1051
BbvI GCAGC 8 cut(s) 144, 283, 448, 1045, 1063, 1111, 1408, 1436
BccI CCATC 4 cut(s) 176, 884, 966, 1456
BceAI ACGGC 3 cut(s) 232, 1243, 1412
BcgI CGANNNNNNTGC 4 cut(s) 390, 424, 1237, 1271
BciT130I CCWGG 1 cut(s) 504
BciVI GTATCC 1 cut(s) 742
BclI TGATCA 2 cut(s) 1030, 1480
BcoDI GTCTC 4 cut(s) 687, 720, 1202, 1638
BcuI ACTAGT 1 cut(s) 713
BfaI CTAG 4 cut(s) 714, 786, 809, 1067
BfmI CTRYAG 5 cut(s) 434, 999, 1077, 1422, 1470
BfuAI ACCTGC 1 cut(s) 304
BfuI GTATCC 1 cut(s) 742
BlnI CCTAGG 1 cut(s) 1066
BmcAI AGTACT 1 cut(s) 718
Bme1390I CCNGG 1 cut(s) 504
Bme18I GGWCC 1 cut(s) 1228
BmeT110I CYCGRG 2 cut(s) 686, 854
BmgT120I GGNCC 2 cut(s) 560, 1228
BmiI GGNNCC 3 cut(s) 1230, 1446, 1674
BmrFI CCNGG 1 cut(s) 504
BmsI GCATC 3 cut(s) 313, 475, 565
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 3 cut(s) 744, 1090, 1389
BpuEI CTTGAG 1 cut(s) 662
Bsa29I ATCGAT 1 cut(s) 1369
BsaJI CCNNGG 2 cut(s) 1066, 1815
BsaWI WCCGGW 1 cut(s) 194
BsaXI ACNNNNNCTCC 6 cut(s) 717, 747, 1088, 1118, 1195, 1225
Bsc4I CCNNNNNNNGG 3 cut(s) 126, 215, 316
Bse1I ACTGG 3 cut(s) 452, 1107, 1406
Bse3DI GCAATG 3 cut(s) 333, 750, 1134
BseBI CCWGG 1 cut(s) 504
BseCI ATCGAT 1 cut(s) 1369
BseDI CCNNGG 2 cut(s) 1066, 1815
BseGI GGATG 2 cut(s) 490, 1811
BseLI CCNNNNNNNGG 3 cut(s) 126, 215, 316
BseMI GCAATG 3 cut(s) 333, 750, 1134
BseMII CTCAG 2 cut(s) 555, 1632
BseNI ACTGG 3 cut(s) 452, 1107, 1406
BseSI GKGCMC 1 cut(s) 1051
BseXI GCAGC 8 cut(s) 144, 283, 448, 1045, 1063, 1111, 1408, 1436
BseYI CCCAGC 1 cut(s) 309
BsgI GTGCAG 1 cut(s) 290
BshFI GGCC 2 cut(s) 561, 1776
BshNI GGYRCC 1 cut(s) 1672
BshVI ATCGAT 1 cut(s) 1369
BsiHKAI GWGCWC 3 cut(s) 307, 907, 1051
BsiHKCI CYCGRG 2 cut(s) 686, 854
BsiSI CCGG 1 cut(s) 195
BslFI GGGAC 1 cut(s) 1406
BslI CCNNNNNNNGG 3 cut(s) 126, 215, 316
BsmAI GTCTC 4 cut(s) 687, 720, 1202, 1638
BsmBI CGTCTC 1 cut(s) 720
BsmFI GGGAC 1 cut(s) 1406
BsmI GAATGC 2 cut(s) 894, 1260
BsnI GGCC 2 cut(s) 561, 1776
BsoBI CYCGRG 2 cut(s) 686, 854
Bsp1286I GDGCHC 5 cut(s) 189, 307, 693, 907, 1051
Bsp143I GATC 5 cut(s) 781, 1030, 1131, 1366, 1480
Bsp19I CCATGG 1 cut(s) 1815
BspACI CCGC 6 cut(s) 155, 763, 929, 1314, 1345, 1803
BspANI GGCC 2 cut(s) 561, 1776
BspCNI CTCAG 2 cut(s) 556, 1633
BspDI ATCGAT 1 cut(s) 1369
BspLI GGNNCC 3 cut(s) 1230, 1446, 1674
BspMAI CTGCAG 4 cut(s) 438, 1081, 1426, 1474
BspMI ACCTGC 1 cut(s) 304
BspPI GGATC 1 cut(s) 776
BspQI GCTCTTC 1 cut(s) 465
BspT107I GGYRCC 1 cut(s) 1672
BsrDI GCAATG 3 cut(s) 333, 750, 1134
BsrI ACTGG 3 cut(s) 452, 1107, 1406
BssECI CCNNGG 2 cut(s) 1066, 1815
BssMI GATC 5 cut(s) 781, 1030, 1131, 1366, 1480
BssSI CACGAG 1 cut(s) 868
BssT1I CCWWGG 2 cut(s) 1066, 1815
Bst2BI CACGAG 1 cut(s) 868
Bst2UI CCWGG 1 cut(s) 504
Bst6I CTCTTC 1 cut(s) 465
BstAPI GCANNNNNTGC 1 cut(s) 1055
BstDEI CTNAG 3 cut(s) 564, 579, 1641
BstDSI CCRYGG 1 cut(s) 1815
BstF5I GGATG 2 cut(s) 490, 1811
BstHHI GCGC 1 cut(s) 333
BstKTI GATC 5 cut(s) 784, 1033, 1134, 1369, 1483
BstMAI GTCTC 4 cut(s) 687, 720, 1202, 1638
BstMBI GATC 5 cut(s) 781, 1030, 1131, 1366, 1480
BstMWI GCNNNNNNNGC 4 cut(s) 132, 1046, 1055, 1082
BstNI CCWGG 1 cut(s) 504
BstNSI RCATGY 3 cut(s) 1314, 1353, 1525
BstSCI CCNGG 1 cut(s) 502
BstSFI CTRYAG 5 cut(s) 434, 999, 1077, 1422, 1470
BstSLI GKGCMC 1 cut(s) 1051
BstV1I GCAGC 8 cut(s) 144, 283, 448, 1045, 1063, 1111, 1408, 1436
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 1 cut(s) 781
BstXI CCANNNNNNTGG 1 cut(s) 1178
BstYI RGATCY 1 cut(s) 781
Bsu15I ATCGAT 1 cut(s) 1369
BsuI GTATCC 1 cut(s) 742
BsuRI GGCC 2 cut(s) 561, 1776
BsuTUI ATCGAT 1 cut(s) 1369
BtgI CCRYGG 1 cut(s) 1815
BtgZI GCGATG 1 cut(s) 985
BtsCI GGATG 2 cut(s) 490, 1811
BtsIMutI CAGTG 4 cut(s) 219, 391, 922, 1114
BveI ACCTGC 1 cut(s) 304
CfoI GCGC 1 cut(s) 333
Cfr13I GGNCC 2 cut(s) 560, 1228
ClaI ATCGAT 1 cut(s) 1369
CseI GACGC 1 cut(s) 1284
CsiI ACCWGGT 1 cut(s) 502
Csp6I GTAC 8 cut(s) 38, 507, 586, 717, 1203, 1358, 1386, 1695
CviAII CATG 9 cut(s) 349, 1172, 1311, 1350, 1361, 1506, 1522, 1760, 1816
CviQI GTAC 8 cut(s) 38, 507, 586, 717, 1203, 1358, 1386, 1695
DdeI CTNAG 3 cut(s) 564, 579, 1641
DpnI GATC 5 cut(s) 783, 1032, 1133, 1368, 1482
DpnII GATC 5 cut(s) 781, 1030, 1131, 1366, 1480
DraI TTTAAA 2 cut(s) 702, 1092
EaeI YGGCCR 1 cut(s) 1774
Eam1104I CTCTTC 1 cut(s) 465
EarI CTCTTC 1 cut(s) 465
EciI GGCGGA 1 cut(s) 1360
Eco130I CCWWGG 2 cut(s) 1066, 1815
Eco24I GRGCYC 2 cut(s) 189, 693
Eco47I GGWCC 1 cut(s) 1228
Eco57I CTGAAG 2 cut(s) 486, 1613
Eco88I CYCGRG 2 cut(s) 686, 854
EcoO109I RGGNCCY 1 cut(s) 1228
EcoRII CCWGG 1 cut(s) 502
EcoT14I CCWWGG 2 cut(s) 1066, 1815
EcoT38I GRGCYC 2 cut(s) 189, 693
ErhI CCWWGG 2 cut(s) 1066, 1815
Esp3I CGTCTC 1 cut(s) 720
FaeI CATG 9 cut(s) 352, 1175, 1314, 1353, 1364, 1509, 1525, 1763, 1819
FaqI GGGAC 1 cut(s) 1406
FatI CATG 9 cut(s) 348, 1171, 1310, 1349, 1360, 1505, 1521, 1759, 1815
FauNDI CATATG 1 cut(s) 1020
FbaI TGATCA 2 cut(s) 1030, 1480
FblI GTMKAC 1 cut(s) 1599
FokI GGATG 2 cut(s) 497, 1798
FriOI GRGCYC 2 cut(s) 189, 693
FspBI CTAG 4 cut(s) 714, 786, 809, 1067
GlaI GCGC 1 cut(s) 332
GsaI CCCAGC 1 cut(s) 313
GsuI CTGGAG 3 cut(s) 744, 1090, 1389
HaeIII GGCC 2 cut(s) 561, 1776
HapII CCGG 1 cut(s) 195
HgaI GACGC 1 cut(s) 1284
HhaI GCGC 1 cut(s) 333
Hin1II CATG 9 cut(s) 352, 1175, 1314, 1353, 1364, 1509, 1525, 1763, 1819
Hin6I GCGC 1 cut(s) 331
HinP1I GCGC 1 cut(s) 331
HindIII AAGCTT 1 cut(s) 1114
HinfI GANTC 7 cut(s) 138, 164, 200, 884, 1210, 1624, 1823
HpaII CCGG 1 cut(s) 195
HphI GGTGA 3 cut(s) 28, 209, 1082
Hpy166II GTNNAC 5 cut(s) 391, 509, 1049, 1511, 1600
Hpy188I TCNGA 4 cut(s) 781, 889, 960, 1329
Hpy188III TCNNGA 7 cut(s) 464, 686, 854, 1242, 1294, 1436, 1457
Hpy8I GTNNAC 5 cut(s) 391, 509, 1049, 1511, 1600
Hpy99I CGWCG 1 cut(s) 819
HpyAV CCTTC 6 cut(s) 461, 1017, 1156, 1219, 1243, 1506
HpyCH4IV ACGT 3 cut(s) 814, 979, 1680
HpyF10VI GCNNNNNNNGC 4 cut(s) 132, 1046, 1055, 1082
HpyF3I CTNAG 3 cut(s) 564, 579, 1641
HpySE526I ACGT 3 cut(s) 814, 979, 1680
Hsp92II CATG 9 cut(s) 352, 1175, 1314, 1353, 1364, 1509, 1525, 1763, 1819
HspAI GCGC 1 cut(s) 331
Ksp22I TGATCA 2 cut(s) 1030, 1480
Kzo9I GATC 5 cut(s) 781, 1030, 1131, 1366, 1480
LguI GCTCTTC 1 cut(s) 465
LmnI GCTCC 1 cut(s) 286
Lsp1109I GCAGC 8 cut(s) 144, 283, 448, 1045, 1063, 1111, 1408, 1436
LweI GCATC 3 cut(s) 313, 475, 565
MabI ACCWGGT 1 cut(s) 502
MaeI CTAG 4 cut(s) 714, 786, 809, 1067
MaeII ACGT 3 cut(s) 814, 979, 1680
MaeIII GTNAC 4 cut(s) 340, 594, 937, 1334
MalI GATC 5 cut(s) 783, 1032, 1133, 1368, 1482
MboI GATC 5 cut(s) 781, 1030, 1131, 1366, 1480
MfeI CAATTG 1 cut(s) 984
MflI RGATCY 1 cut(s) 781
MhlI GDGCHC 5 cut(s) 189, 307, 693, 907, 1051
MlsI TGGCCA 1 cut(s) 1776
MluNI TGGCCA 1 cut(s) 1776
MlyI GAGTC 1 cut(s) 1204
MmeI TCCRAC 4 cut(s) 408, 648, 1125, 1629
MnlI CCTC 7 cut(s) 34, 219, 231, 607, 830, 1073, 1813
Mox20I TGGCCA 1 cut(s) 1776
MscI TGGCCA 1 cut(s) 1776
MseI TTAA 2 cut(s) 701, 1091
Msp20I TGGCCA 1 cut(s) 1776
MspI CCGG 1 cut(s) 195
MspR9I CCNGG 1 cut(s) 504
MunI CAATTG 1 cut(s) 984
Mva1269I GAATGC 2 cut(s) 894, 1260
MvaI CCWGG 1 cut(s) 504
MwoI GCNNNNNNNGC 4 cut(s) 132, 1046, 1055, 1082
NcoI CCATGG 1 cut(s) 1815
NdeI CATATG 1 cut(s) 1020
NdeII GATC 5 cut(s) 781, 1030, 1131, 1366, 1480
NlaIII CATG 9 cut(s) 352, 1175, 1314, 1353, 1364, 1509, 1525, 1763, 1819
NlaIV GGNNCC 3 cut(s) 1230, 1446, 1674
NmuCI GTSAC 2 cut(s) 340, 1334
NspI RCATGY 3 cut(s) 1314, 1353, 1525
PaeR7I CTCGAG 1 cut(s) 686
PaqCI CACCTGC 1 cut(s) 304
PciI ACATGT 1 cut(s) 1521
PciSI GCTCTTC 1 cut(s) 465
PctI GAATGC 2 cut(s) 894, 1260
PfeI GAWTC 6 cut(s) 138, 164, 200, 884, 1624, 1823
PflFI GACNNNGTC 1 cut(s) 1320
PflMI CCANNNNNTGG 1 cut(s) 316
PleI GAGTC 1 cut(s) 1204
PpsI GAGTC 1 cut(s) 1204
PpuMI RGGWCCY 1 cut(s) 1228
PscI ACATGT 1 cut(s) 1521
Psp5II RGGWCCY 1 cut(s) 1228
Psp6I CCWGG 1 cut(s) 502
PspFI CCCAGC 1 cut(s) 309
PspGI CCWGG 1 cut(s) 502
PspN4I GGNNCC 3 cut(s) 1230, 1446, 1674
PspPI GGNCC 2 cut(s) 560, 1228
PspPPI RGGWCCY 1 cut(s) 1228
PstI CTGCAG 4 cut(s) 438, 1081, 1426, 1474
PsuI RGATCY 1 cut(s) 781
PsyI GACNNNGTC 1 cut(s) 1320
RsaI GTAC 8 cut(s) 39, 508, 587, 718, 1204, 1359, 1387, 1696
RsaNI GTAC 8 cut(s) 38, 507, 586, 717, 1203, 1358, 1386, 1695
SapI GCTCTTC 1 cut(s) 465
SaqAI TTAA 2 cut(s) 701, 1091
Sau3AI GATC 5 cut(s) 781, 1030, 1131, 1366, 1480
Sau96I GGNCC 2 cut(s) 560, 1228
SbfI CCTGCAGG 1 cut(s) 1474
ScaI AGTACT 1 cut(s) 718
SchI GAGTC 1 cut(s) 1204
ScrFI CCNGG 1 cut(s) 504
SdaI CCTGCAGG 1 cut(s) 1474
SduI GDGCHC 5 cut(s) 189, 307, 693, 907, 1051
SexAI ACCWGGT 1 cut(s) 502
SfaNI GCATC 3 cut(s) 313, 475, 565
SfcI CTRYAG 5 cut(s) 434, 999, 1077, 1422, 1470
Sfr274I CTCGAG 1 cut(s) 686
SinI GGWCC 1 cut(s) 1228
SlaI CTCGAG 1 cut(s) 686
SmlI CTYRAG 2 cut(s) 677, 686
SmoI CTYRAG 2 cut(s) 677, 686
SpeI ACTAGT 1 cut(s) 713
Sse8387I CCTGCAGG 1 cut(s) 1474
SsiI CCGC 6 cut(s) 155, 763, 929, 1314, 1345, 1803
SspMI CTAG 4 cut(s) 714, 786, 809, 1067
StyD4I CCNGG 1 cut(s) 502
StyI CCWWGG 2 cut(s) 1066, 1815
TaiI ACGT 3 cut(s) 817, 982, 1683
TaqI TCGA 5 cut(s) 518, 687, 835, 1134, 1369
TatI WGTACW 3 cut(s) 585, 716, 1357
TauI GCSGC 2 cut(s) 158, 766
TfiI GAWTC 6 cut(s) 138, 164, 200, 884, 1624, 1823
Tru1I TTAA 2 cut(s) 701, 1091
Tru9I TTAA 2 cut(s) 701, 1091
TscAI CASTG 4 cut(s) 226, 391, 922, 1114
TseFI GTSAC 2 cut(s) 340, 1334
TseI GCWGC 8 cut(s) 132, 271, 436, 1058, 1076, 1124, 1421, 1424
Tsp45I GTSAC 2 cut(s) 340, 1334
TspGWI ACGGA 1 cut(s) 1410
TspRI CASTG 4 cut(s) 226, 391, 922, 1114
Tth111I GACNNNGTC 1 cut(s) 1320
Van91I CCANNNNNTGG 1 cut(s) 316
VneI GTGCAC 1 cut(s) 1047
VpaK11BI GGWCC 1 cut(s) 1228
XapI RAATTY 4 cut(s) 278, 697, 944, 1460
XceI RCATGY 3 cut(s) 1314, 1353, 1525
XhoI CTCGAG 1 cut(s) 686
XmaJI CCTAGG 1 cut(s) 1066
XmiI GTMKAC 1 cut(s) 1599
XspI CTAG 4 cut(s) 714, 786, 809, 1067
ZrmI AGTACT 1 cut(s) 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.