Rw0G002760

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00087
OG0000074
Physical Location & Seq
Forward (+)
28734 .. 31132
2399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G002760.1

Sequence Viewer

Length: 1491 bp
ATGGAGATGAATGGATGTAGTCAGTTCAAGAAAGTAGTTCCAGATTTAGCGGCAAAATTTGGAAATGTGGAATTGAATGGGAGAAATTTCAAAGATATCACATATGAGGACGTTAAACATTTATGGTTTCGAACCATAGATGAAGCAGAGAAGTTCTATAAGTATTACTCCAATGTGGTCGGCTTCAGCACAAGGAAAGCTAAAAAGGACCTATACAAAACCAAAAAAACAGTACATCGAAGGCAGTGGGTGCGTTCTAAAGTTGGACGACATGTCCCGGTACAAAAGACCACAGAGTTTGGAAGTGCTGGAATCAATGAAGCCCCCAATGGTGTTAAGAAAAAGCTGTCGAGGAACAGATTGCTTTGGGGAAGAAGGATAACTAGATGTGGCTGCCCTGCCCAATTGATGATTATTCTGCAAAATTTGTACTATGTTTCAAAGTTTATTACGCAGCACAATCATGATCTTGTTATCGGGCTTGAAGTTCATTTCCTTAGGTCCCACTGTAATGTTGAGGGACACGACATTGCACAGGTTGAATCCCTTCTTCAAGCACAGGTCTCCATTAGCCGAGCGTATGAATTTCTTGCCTACCAAGCGGGTGGATATCATAACATGCGATTCCTGTTGAAGGATCTTTACAACAAGCTTCATCCAAAGATATTGAAAAATGGTGACGAGGGTGATGCAGAAACGGCTTATGACAGAGTAGAACGTCATTGGTGCGTTGAGTATCGAGGCAACAATGGGAATCCTGAGTGGTTCTGCTCGTGCAAGATATATGAATCCGACGGCATTCCTTGTACTCATTTGTTCAGTGTTATGAAATCGGAGTTGGTTTCAGAATTCCCAAAGTGTCTCATTTTGAAGCGATGGACACATTTAGTTGCCAAAACTACTTTGGCCCCTTCGCTTTCCCAAATGTCCAATGATAAGTCTGCCCAACATGCAAGGTATGCTGCCCTCCTAATTGAAGCTGCACAAGCCTGTTTAAATTACTCCAACTCCACTGAAAGCTTCAATGCTGCAATGATCGAACTTCAAACCTTCAAATCTAAATCTCTGCAATACCATGAAGTTGGGAAAATAAACGTTGCTAACCCTACAGACAGTCCCATTATTGTGAGGGACCCGTTGATGTCAAGAACAAAGGGAATGTCGTGCAATACACAAGGGCGCACTGAAAGTCAAGTGAAGAAAAGTATTGGTCACAATAGGTGCACATGCAATTCACATGAAGATCGGTTCGAGATAATTGGTTCCGGAGATGAACAATCTCCTGCCATTAATATTGTTGCGGCTGTTGGTCACGAATGGGAACCATCAGTTCCAGACTTTTCTCCTGCGGGGAGTGATCACATTTCAACTCCTTCCAGCACATGTTTACCTACAAAGGTCTCGCAGCCAGGCCTTGTGCAACCAAAACCATCCATATCAATTCGGCTGAATGATAGCATGTTGCCTGATATGGAGTTCCCCTTGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

496

Amino Acids

56.11

Weight (kDa)

8.95

Isoelectric Point (pI)

46.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 51 - 158 5e-12 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 1265
AciI CCGC 4 cut(s) 50, 602, 1301, 1349
AclI AACGTT 1 cut(s) 1095
AclWI GGATC 1 cut(s) 645
AcsI RAATTY 5 cut(s) 56, 85, 424, 584, 848
AcuI CTGAAG 1 cut(s) 169
AfaI GTAC 4 cut(s) 234, 282, 431, 808
AfiI CCNNNNNNNGG 1 cut(s) 634
AflIII ACRYGT 2 cut(s) 271, 1382
AhdI GACNNNNNGTC 1 cut(s) 272
AjnI CCWGG 1 cut(s) 1408
AjuI GAANNNNNNNTTGG 2 cut(s) 821, 853
AluBI AGCT 5 cut(s) 200, 346, 652, 980, 1020
AluI AGCT 5 cut(s) 200, 346, 652, 980, 1020
Alw21I GWGCWC 1 cut(s) 1226
Alw26I GTCTC 3 cut(s) 568, 866, 1405
Alw44I GTGCAC 1 cut(s) 1222
AlwI GGATC 1 cut(s) 645
Aor13HI TCCGGA 1 cut(s) 1265
AoxI GGCC 2 cut(s) 906, 1411
ApaLI GTGCAC 1 cut(s) 1222
ApeKI GCWGC 6 cut(s) 393, 454, 962, 980, 1028, 1405
ApoI RAATTY 5 cut(s) 56, 85, 424, 584, 848
ArsI GACNNNNNNTTYG 2 cut(s) 1145, 1177
AseI ATTAAT 1 cut(s) 1290
Asp700I GAANNNNTTC 1 cut(s) 546
AspLEI GCGC 1 cut(s) 1182
AspS9I GGNCC 4 cut(s) 208, 501, 907, 1132
AsuC2I CCSGG 1 cut(s) 278
AsuHPI GGTGA 2 cut(s) 689, 698
AsuII TTCGAA 1 cut(s) 130
AvaII GGWCC 3 cut(s) 208, 501, 1132
AxyI CCTNAGG 1 cut(s) 497
BaeGI GKGCMC 1 cut(s) 1226
BarI GAAGNNNNNNTAC 2 cut(s) 626, 658
BauI CACGAG 1 cut(s) 772
Bbv12I GWGCWC 1 cut(s) 1226
BbvI GCAGC 6 cut(s) 380, 466, 949, 967, 1015, 1417
BccI CCATC 3 cut(s) 870, 1333, 1438
BceAI ACGGC 2 cut(s) 714, 811
BcgI CGANNNNNNTGC 2 cut(s) 671, 705
BciT130I CCWGG 1 cut(s) 1410
BclI TGATCA 1 cut(s) 1357
BcnI CCSGG 1 cut(s) 278
BcoDI GTCTC 3 cut(s) 568, 866, 1405
BfaI CTAG 1 cut(s) 384
BfmI CTRYAG 1 cut(s) 1107
BisI GCNGC 8 cut(s) 51, 394, 455, 963, 981, 1029, 1302, 1406
BlsI GCNGC 8 cut(s) 52, 395, 456, 964, 982, 1030, 1303, 1407
Bme1390I CCNGG 2 cut(s) 278, 1410
Bme18I GGWCC 3 cut(s) 208, 501, 1132
BmeRI GACNNNNNGTC 1 cut(s) 272
BmgT120I GGNCC 4 cut(s) 208, 501, 907, 1132
BmiI GGNNCC 6 cut(s) 503, 909, 1133, 1134, 1264, 1323
BmrFI CCNGG 2 cut(s) 278, 1410
BmsI GCATC 1 cut(s) 679
Bpu14I TTCGAA 1 cut(s) 130
BpuMI CCSGG 1 cut(s) 278
BsaI GGTCTC 2 cut(s) 568, 1405
BsaJI CCNNGG 1 cut(s) 1482
BsaWI WCCGGW 1 cut(s) 1265
BsaXI ACNNNNNCTCC 2 cut(s) 992, 1022
Bsc4I CCNNNNNNNGG 1 cut(s) 634
Bse21I CCTNAGG 1 cut(s) 497
Bse3DI GCAATG 2 cut(s) 528, 1038
BseAI TCCGGA 1 cut(s) 1265
BseBI CCWGG 1 cut(s) 1410
BseDI CCNNGG 1 cut(s) 1482
BseGI GGATG 3 cut(s) 20, 655, 1430
BseLI CCNNNNNNNGG 1 cut(s) 634
BseMI GCAATG 2 cut(s) 528, 1038
BseMII CTCAG 1 cut(s) 750
BseSI GKGCMC 1 cut(s) 1226
BseXI GCAGC 6 cut(s) 380, 466, 949, 967, 1015, 1417
BsgI GTGCAG 1 cut(s) 966
BshFI GGCC 2 cut(s) 908, 1413
BsiHKAI GWGCWC 1 cut(s) 1226
BsiSI CCGG 2 cut(s) 278, 1266
BslFI GGGAC 5 cut(s) 260, 487, 534, 1101, 1145
BslI CCNNNNNNNGG 1 cut(s) 634
BsmAI GTCTC 3 cut(s) 568, 866, 1405
BsmFI GGGAC 5 cut(s) 260, 487, 534, 1101, 1145
BsmI GAATGC 1 cut(s) 798
BsnI GGCC 2 cut(s) 908, 1413
Bso31I GGTCTC 2 cut(s) 568, 1405
Bsp119I TTCGAA 1 cut(s) 130
Bsp1286I GDGCHC 1 cut(s) 1226
Bsp13I TCCGGA 1 cut(s) 1265
Bsp143I GATC 5 cut(s) 466, 637, 1035, 1243, 1357
BspACI CCGC 4 cut(s) 50, 602, 1301, 1349
BspANI GGCC 2 cut(s) 908, 1413
BspCNI CTCAG 1 cut(s) 751
BspEI TCCGGA 1 cut(s) 1265
BspHI TCATGA 1 cut(s) 463
BspLI GGNNCC 6 cut(s) 503, 909, 1133, 1134, 1264, 1323
BspPI GGATC 1 cut(s) 645
BspT104I TTCGAA 1 cut(s) 130
BspTNI GGTCTC 2 cut(s) 568, 1405
BsrDI GCAATG 2 cut(s) 528, 1038
BssECI CCNNGG 1 cut(s) 1482
BssMI GATC 5 cut(s) 466, 637, 1035, 1243, 1357
BssSI CACGAG 1 cut(s) 772
BssT1I CCWWGG 1 cut(s) 1482
Bst2BI CACGAG 1 cut(s) 772
Bst2UI CCWGG 1 cut(s) 1410
Bst4CI ACNGT 3 cut(s) 232, 509, 1115
BstAPI GCANNNNNTGC 2 cut(s) 250, 959
BstBI TTCGAA 1 cut(s) 130
BstDEI CTNAG 2 cut(s) 497, 759
BstENI CCTNNNNNAGG 1 cut(s) 632
BstF5I GGATG 3 cut(s) 20, 655, 1430
BstHHI GCGC 1 cut(s) 1182
BstKTI GATC 5 cut(s) 469, 640, 1038, 1246, 1360
BstMAI GTCTC 3 cut(s) 568, 866, 1405
BstMBI GATC 5 cut(s) 466, 637, 1035, 1243, 1357
BstMWI GCNNNNNNNGC 6 cut(s) 250, 599, 698, 950, 959, 986
BstNI CCWGG 1 cut(s) 1410
BstNSI RCATGY 6 cut(s) 275, 622, 953, 1230, 1386, 1462
BstSCI CCNGG 2 cut(s) 276, 1408
BstSFI CTRYAG 1 cut(s) 1107
BstSLI GKGCMC 1 cut(s) 1226
BstV1I GCAGC 6 cut(s) 380, 466, 949, 967, 1015, 1417
BstX2I RGATCY 1 cut(s) 637
BstXI CCANNNNNNTGG 2 cut(s) 605, 1082
BstYI RGATCY 1 cut(s) 637
Bsu36I CCTNAGG 1 cut(s) 497
BsuRI GGCC 2 cut(s) 908, 1413
BtgZI GCGATG 1 cut(s) 889
BtsCI GGATG 3 cut(s) 20, 655, 1430
BtsI GCAGTG 1 cut(s) 251
BtsIMutI CAGTG 5 cut(s) 251, 505, 826, 1011, 1182
CciI TCATGA 1 cut(s) 463
CfoI GCGC 1 cut(s) 1182
Cfr13I GGNCC 4 cut(s) 208, 501, 907, 1132
Csp6I GTAC 4 cut(s) 233, 281, 430, 807
CspCI CAANNNNNGTGG 2 cut(s) 280, 315
CviAII CATG 9 cut(s) 272, 464, 619, 950, 1076, 1227, 1238, 1383, 1459
CviQI GTAC 4 cut(s) 233, 281, 430, 807
DdeI CTNAG 2 cut(s) 497, 759
DpnI GATC 5 cut(s) 468, 639, 1037, 1245, 1359
DpnII GATC 5 cut(s) 466, 637, 1035, 1243, 1357
DraI TTTAAA 1 cut(s) 996
DriI GACNNNNNGTC 1 cut(s) 272
Eam1105I GACNNNNNGTC 1 cut(s) 272
Eco130I CCWWGG 1 cut(s) 1482
Eco147I AGGCCT 1 cut(s) 1413
Eco31I GGTCTC 2 cut(s) 568, 1405
Eco32I GATATC 2 cut(s) 97, 611
Eco47I GGWCC 3 cut(s) 208, 501, 1132
Eco57I CTGAAG 1 cut(s) 169
Eco81I CCTNAGG 1 cut(s) 497
EcoNI CCTNNNNNAGG 1 cut(s) 632
EcoO109I RGGNCCY 3 cut(s) 208, 501, 1132
EcoRI GAATTC 1 cut(s) 848
EcoRII CCWGG 1 cut(s) 1408
EcoRV GATATC 2 cut(s) 97, 611
EcoT14I CCWWGG 1 cut(s) 1482
ErhI CCWWGG 1 cut(s) 1482
FaeI CATG 9 cut(s) 275, 467, 622, 953, 1079, 1230, 1241, 1386, 1462
FaqI GGGAC 5 cut(s) 260, 487, 534, 1101, 1145
FatI CATG 9 cut(s) 271, 463, 618, 949, 1075, 1226, 1237, 1382, 1458
FauI CCCGC 2 cut(s) 595, 1342
FauNDI CATATG 1 cut(s) 103
FbaI TGATCA 1 cut(s) 1357
Fnu4HI GCNGC 8 cut(s) 51, 394, 455, 963, 981, 1029, 1302, 1406
FokI GGATG 3 cut(s) 27, 642, 1417
Fsp4HI GCNGC 8 cut(s) 51, 394, 455, 963, 981, 1029, 1302, 1406
FspBI CTAG 1 cut(s) 384
GlaI GCGC 1 cut(s) 1181
GluI GCNGC 8 cut(s) 51, 394, 455, 963, 981, 1029, 1302, 1406
HaeIII GGCC 2 cut(s) 908, 1413
HapII CCGG 2 cut(s) 278, 1266
HhaI GCGC 1 cut(s) 1182
Hin1II CATG 9 cut(s) 275, 467, 622, 953, 1079, 1230, 1241, 1386, 1462
Hin6I GCGC 1 cut(s) 1180
HinP1I GCGC 1 cut(s) 1180
HindIII AAGCTT 2 cut(s) 650, 1018
HinfI GANTC 5 cut(s) 312, 542, 624, 754, 788
HpaII CCGG 2 cut(s) 278, 1266
HphI GGTGA 2 cut(s) 689, 698
Hpy166II GTNNAC 2 cut(s) 1224, 1388
Hpy188I TCNGA 4 cut(s) 793, 835, 847, 1490
Hpy188III TCNNGA 9 cut(s) 28, 41, 464, 758, 1146, 1252, 1266, 1313, 1334
Hpy8I GTNNAC 2 cut(s) 1224, 1388
Hpy99I CGWCG 1 cut(s) 797
HpyAV CCTTC 7 cut(s) 234, 369, 557, 628, 921, 1060, 1383
HpyCH4III ACNGT 3 cut(s) 232, 509, 1115
HpyCH4IV ACGT 3 cut(s) 111, 718, 1095
HpyF10VI GCNNNNNNNGC 6 cut(s) 250, 599, 698, 950, 959, 986
HpyF3I CTNAG 2 cut(s) 497, 759
HpySE526I ACGT 3 cut(s) 111, 718, 1095
Hsp92II CATG 9 cut(s) 275, 467, 622, 953, 1079, 1230, 1241, 1386, 1462
HspAI GCGC 1 cut(s) 1180
KflI GGGWCCC 1 cut(s) 1132
Kpn2I TCCGGA 1 cut(s) 1265
Ksp22I TGATCA 1 cut(s) 1357
Kzo9I GATC 5 cut(s) 466, 637, 1035, 1243, 1357
Lsp1109I GCAGC 6 cut(s) 380, 466, 949, 967, 1015, 1417
LweI GCATC 1 cut(s) 679
MaeI CTAG 1 cut(s) 384
MaeII ACGT 3 cut(s) 111, 718, 1095
MaeIII GTNAC 3 cut(s) 677, 1211, 1310
MalI GATC 5 cut(s) 468, 639, 1037, 1245, 1359
MboI GATC 5 cut(s) 466, 637, 1035, 1243, 1357
MboII GAAGA 4 cut(s) 384, 542, 1210, 1253
MfeI CAATTG 1 cut(s) 404
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 1 cut(s) 1226
MmeI TCCRAC 3 cut(s) 244, 816, 1029
MnlI CCTC 7 cut(s) 100, 345, 511, 676, 734, 977, 1122
MroI TCCGGA 1 cut(s) 1265
MroXI GAANNNNTTC 1 cut(s) 546
MseI TTAA 4 cut(s) 114, 336, 995, 1290
MslI CAYNNNNRTG 3 cut(s) 462, 510, 1124
MspI CCGG 2 cut(s) 278, 1266
MspR9I CCNGG 2 cut(s) 278, 1410
MunI CAATTG 1 cut(s) 404
Mva1269I GAATGC 1 cut(s) 798
MvaI CCWGG 1 cut(s) 1410
MwoI GCNNNNNNNGC 6 cut(s) 250, 599, 698, 950, 959, 986
NciI CCSGG 1 cut(s) 278
NdeI CATATG 1 cut(s) 103
NdeII GATC 5 cut(s) 466, 637, 1035, 1243, 1357
NlaIII CATG 9 cut(s) 275, 467, 622, 953, 1079, 1230, 1241, 1386, 1462
NlaIV GGNNCC 6 cut(s) 503, 909, 1133, 1134, 1264, 1323
NmeAIII GCCGAG 1 cut(s) 599
NmuCI GTSAC 3 cut(s) 677, 1211, 1310
NspI RCATGY 6 cut(s) 275, 622, 953, 1230, 1386, 1462
NspV TTCGAA 1 cut(s) 130
PagI TCATGA 1 cut(s) 463
PceI AGGCCT 1 cut(s) 1413
PciI ACATGT 2 cut(s) 271, 1382
PctI GAATGC 1 cut(s) 798
PdmI GAANNNNTTC 1 cut(s) 546
PfeI GAWTC 5 cut(s) 312, 542, 624, 754, 788
PkrI GCNGC 8 cut(s) 52, 395, 456, 964, 982, 1030, 1303, 1407
PpuMI RGGWCCY 3 cut(s) 208, 501, 1132
PscI ACATGT 2 cut(s) 271, 1382
PshBI ATTAAT 1 cut(s) 1290
Psp1406I AACGTT 1 cut(s) 1095
Psp5II RGGWCCY 3 cut(s) 208, 501, 1132
Psp6I CCWGG 1 cut(s) 1408
PspGI CCWGG 1 cut(s) 1408
PspN4I GGNNCC 6 cut(s) 503, 909, 1133, 1134, 1264, 1323
PspPI GGNCC 4 cut(s) 208, 501, 907, 1132
PspPPI RGGWCCY 3 cut(s) 208, 501, 1132
PsuI RGATCY 1 cut(s) 637
RsaI GTAC 4 cut(s) 234, 282, 431, 808
RsaNI GTAC 4 cut(s) 233, 281, 430, 807
RseI CAYNNNNRTG 3 cut(s) 462, 510, 1124
SaqAI TTAA 4 cut(s) 114, 336, 995, 1290
SatI GCNGC 8 cut(s) 51, 394, 455, 963, 981, 1029, 1302, 1406
Sau3AI GATC 5 cut(s) 466, 637, 1035, 1243, 1357
Sau96I GGNCC 4 cut(s) 208, 501, 907, 1132
ScrFI CCNGG 2 cut(s) 278, 1410
SduI GDGCHC 1 cut(s) 1226
SfaNI GCATC 1 cut(s) 679
SfcI CTRYAG 1 cut(s) 1107
SfuI TTCGAA 1 cut(s) 130
SinI GGWCC 3 cut(s) 208, 501, 1132
SmiMI CAYNNNNRTG 3 cut(s) 462, 510, 1124
SseBI AGGCCT 1 cut(s) 1413
SsiI CCGC 4 cut(s) 50, 602, 1301, 1349
SspI AATATT 1 cut(s) 1294
SspMI CTAG 1 cut(s) 384
StuI AGGCCT 1 cut(s) 1413
StyD4I CCNGG 2 cut(s) 276, 1408
StyI CCWWGG 1 cut(s) 1482
TaaI ACNGT 3 cut(s) 232, 509, 1115
TaiI ACGT 3 cut(s) 114, 721, 1098
TaqI TCGA 6 cut(s) 130, 238, 350, 739, 1038, 1251
TatI WGTACW 3 cut(s) 232, 429, 806
TauI GCSGC 2 cut(s) 53, 1304
TfiI GAWTC 5 cut(s) 312, 542, 624, 754, 788
Tru1I TTAA 4 cut(s) 114, 336, 995, 1290
Tru9I TTAA 4 cut(s) 114, 336, 995, 1290
TscAI CASTG 5 cut(s) 251, 512, 826, 1018, 1189
TseFI GTSAC 3 cut(s) 677, 1211, 1310
TseI GCWGC 6 cut(s) 393, 454, 962, 980, 1028, 1405
Tsp45I GTSAC 3 cut(s) 677, 1211, 1310
TspRI CASTG 5 cut(s) 251, 512, 826, 1018, 1189
VneI GTGCAC 1 cut(s) 1222
VpaK11BI GGWCC 3 cut(s) 208, 501, 1132
VspI ATTAAT 1 cut(s) 1290
XagI CCTNNNNNAGG 1 cut(s) 632
XapI RAATTY 5 cut(s) 56, 85, 424, 584, 848
XceI RCATGY 6 cut(s) 275, 622, 953, 1230, 1386, 1462
XcmI CCANNNNNNNNNTGG 1 cut(s) 901
XmnI GAANNNNTTC 1 cut(s) 546
XspI CTAG 1 cut(s) 384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.