Rw1G012150

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000074
Physical Location & Seq
Reverse (-)
27162471 .. 27165309
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G012150.1

Sequence Viewer

Length: 1188 bp
ATGGCCAGATTAGTTCGTTCCATGGAGGAGCCTGGGATGTGGAATATGGAGTCCAGTGCTGATGTTTATGTGGAAAGTGATGAAGTCCAGTCCATAGAAGAAGAACAATTTGAGTCAGACACGGATGGCACTAATGTATCGATCCAGGGTGATAGGGCCAGTTGCTTACATTTCAAGGGGAAGCCATATGAAGATCTTGAGGCTGCAGACATGATAGGTGTGGAGTTTGGATCTGTTAATGAAGTGGACTCATTCTATTCATTTTATTCTCTTGCCATGGGTTTTAGCTTCAGAAAGCAAAAGTTGGACAAAGAGGCTGGTACTGTAGTACGAAGGCAGCTGGTTTGTAGTAAGGAAGGGATTAGAAAAAAAAAAAAAAAGTCGTTTGGAAGAGCAGATTTCGGCTTCCTGTCTCCCTACTTCACGGAAGAGAGCCTCGAAAGCATCATTTATGCAGTCAGTTGGCATAGAATTACAAGAAGACATTGCTCTGCCCGTTTAACTGTTCGTTTATGCAAGAAAACCGGTAAATTCCGAGTTGTTGAATTTATAACACAACATAATCATGCCCTTGCTCCAACGGAACTGAAATCCTTCCTCAGATCTCATCGAAACGTTTCAGACCATGCTGTGGCTCAAGTTACTTCTCTTAGGAAGGGGGCTCAAAAGAGGACACCTAACATTCCTAATGATGTGGAAGAGCCCTCTGCTAGGGGATGTGGATTTTGTAGTAGACCTGGTCACAACATCCGGACATGCCCTCTCAGAAAAGAAGCTGATGTCAACTGTGATGCACATAATGCTACGAATCATGCTGCTAATTCGAATGTTGCTGAACATGAAAGGGGAGGTCATAGTTCGGTTTATGCCTCCCTAGGCCCCATTGGATCAGTTGGTGTAGGCCACTCTGCATCTGCTCTCCGAAGTAATGGATCTGCCTTCGCACCGAGCTTCCAAAATGATGACGAGTCAGCCTTCCTTCCTCCATCAAGCATCCAGCACATGATCCATCATGTTGAAGAGGCAAGGACATTTGATTTCTTTTCCGGCCATGACAACATATTGTCTTCTGTGTTAGGTGGAAATGGAAACCTTCGTATGGAAGATCAATCTATCTCTTCTAACCAACCAGGTCCATCACACAATACTGGGGGTCCAAACCCTTTTGTTCATCAATGGTTTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

395

Amino Acids

43.78

Weight (kDa)

6.58

Isoelectric Point (pI)

49.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 84 - 192 3.3e-15 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 551
AccB7I CCANNNNNTGG 1 cut(s) 631
AccI GTMKAC 1 cut(s) 733
AccIII TCCGGA 1 cut(s) 750
AclI AACGTT 1 cut(s) 615
AclWI GGATC 5 cut(s) 136, 238, 895, 940, 1000
AcoI YGGCCR 2 cut(s) 3, 1048
AcsI RAATTY 2 cut(s) 530, 545
AcuI CTGAAG 1 cut(s) 274
AfaI GTAC 2 cut(s) 322, 330
AfiI CCNNNNNNNGG 3 cut(s) 631, 711, 1099
AgeI ACCGGT 1 cut(s) 524
AgsI TTSAA 3 cut(s) 175, 545, 1019
AjnI CCWGG 4 cut(s) 31, 144, 736, 1129
AluBI AGCT 4 cut(s) 288, 340, 776, 951
AluI AGCT 4 cut(s) 288, 340, 776, 951
Alw26I GTCTC 1 cut(s) 417
AlwI GGATC 5 cut(s) 136, 238, 895, 940, 1000
Aor13HI TCCGGA 1 cut(s) 750
AoxI GGCC 5 cut(s) 3, 156, 877, 901, 1048
ApeKI GCWGC 3 cut(s) 203, 337, 815
ApoI RAATTY 2 cut(s) 530, 545
AsiGI ACCGGT 1 cut(s) 524
Asp700I GAANNNNTTC 2 cut(s) 593, 616
AspA2I CCTAGG 1 cut(s) 874
AspS9I GGNCC 4 cut(s) 156, 878, 1133, 1154
AsuHPI GGTGA 1 cut(s) 161
AsuII TTCGAA 1 cut(s) 824
AvaII GGWCC 2 cut(s) 1133, 1154
AvrII CCTAGG 1 cut(s) 874
BaeI ACNNNNGTAYC 4 cut(s) 120, 153, 312, 345
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 2 cut(s) 664, 705
BbsI GAAGAC 2 cut(s) 487, 1059
BbvI GCAGC 3 cut(s) 190, 349, 802
BccI CCATC 4 cut(s) 119, 994, 1017, 1144
BciT130I CCWGG 4 cut(s) 33, 146, 738, 1131
BcoDI GTCTC 1 cut(s) 417
BfaI CTAG 2 cut(s) 711, 875
BfmI CTRYAG 2 cut(s) 204, 324
BglII AGATCT 2 cut(s) 193, 602
BisI GCNGC 3 cut(s) 204, 338, 816
BlnI CCTAGG 1 cut(s) 874
BlsI GCNGC 3 cut(s) 205, 339, 817
Bme1390I CCNGG 4 cut(s) 33, 146, 738, 1131
Bme18I GGWCC 2 cut(s) 1133, 1154
BmgT120I GGNCC 4 cut(s) 156, 878, 1133, 1154
BmiI GGNNCC 3 cut(s) 30, 880, 1155
BmrFI CCNGG 4 cut(s) 33, 146, 738, 1131
BmrI ACTGGG 1 cut(s) 1158
BmsI GCATC 4 cut(s) 453, 781, 920, 1002
BmuI ACTGGG 1 cut(s) 1158
BpiI GAAGAC 2 cut(s) 487, 1059
Bpu14I TTCGAA 1 cut(s) 824
BpuEI CTTGAG 2 cut(s) 218, 621
Bsa29I ATCGAT 1 cut(s) 140
BsaJI CCNNGG 5 cut(s) 21, 32, 145, 276, 874
BsaWI WCCGGW 2 cut(s) 524, 750
Bsc4I CCNNNNNNNGG 3 cut(s) 631, 711, 1099
Bse118I RCCGGY 1 cut(s) 524
Bse1I ACTGG 4 cut(s) 54, 88, 159, 1153
Bse3DI GCAATG 1 cut(s) 484
BseAI TCCGGA 1 cut(s) 750
BseBI CCWGG 4 cut(s) 33, 146, 738, 1131
BseCI ATCGAT 1 cut(s) 140
BseDI CCNNGG 5 cut(s) 21, 32, 145, 276, 874
BseGI GGATG 5 cut(s) 42, 130, 722, 747, 993
BseLI CCNNNNNNNGG 3 cut(s) 631, 711, 1099
BseMI GCAATG 1 cut(s) 484
BseMII CTCAG 2 cut(s) 613, 778
BseNI ACTGG 4 cut(s) 54, 88, 159, 1153
BseRI GAGGAG 1 cut(s) 41
BseXI GCAGC 3 cut(s) 190, 349, 802
BshFI GGCC 5 cut(s) 5, 158, 879, 903, 1050
BshTI ACCGGT 1 cut(s) 524
BshVI ATCGAT 1 cut(s) 140
BsiSI CCGG 3 cut(s) 525, 751, 1047
BslI CCNNNNNNNGG 3 cut(s) 631, 711, 1099
BsmAI GTCTC 1 cut(s) 417
BsnI GGCC 5 cut(s) 5, 158, 879, 903, 1050
Bsp119I TTCGAA 1 cut(s) 824
Bsp1286I GDGCHC 2 cut(s) 664, 705
Bsp13I TCCGGA 1 cut(s) 750
Bsp143I GATC 8 cut(s) 141, 193, 230, 602, 887, 932, 1005, 1105
Bsp19I CCATGG 2 cut(s) 21, 276
BspANI GGCC 5 cut(s) 5, 158, 879, 903, 1050
BspCNI CTCAG 2 cut(s) 612, 777
BspDI ATCGAT 1 cut(s) 140
BspEI TCCGGA 1 cut(s) 750
BspLI GGNNCC 3 cut(s) 30, 880, 1155
BspMAI CTGCAG 1 cut(s) 208
BspPI GGATC 5 cut(s) 136, 238, 895, 940, 1000
BspQI GCTCTTC 2 cut(s) 385, 693
BspT104I TTCGAA 1 cut(s) 824
BsrDI GCAATG 1 cut(s) 484
BsrFI RCCGGY 1 cut(s) 524
BsrI ACTGG 4 cut(s) 54, 88, 159, 1153
BssAI RCCGGY 1 cut(s) 524
BssECI CCNNGG 5 cut(s) 21, 32, 145, 276, 874
BssMI GATC 8 cut(s) 141, 193, 230, 602, 887, 932, 1005, 1105
BssT1I CCWWGG 3 cut(s) 21, 276, 874
Bst2UI CCWGG 4 cut(s) 33, 146, 738, 1131
Bst4CI ACNGT 3 cut(s) 325, 505, 788
Bst6I CTCTTC 5 cut(s) 385, 423, 693, 1014, 1123
BstAPI GCANNNNNTGC 1 cut(s) 800
BstBI TTCGAA 1 cut(s) 824
BstDEI CTNAG 3 cut(s) 599, 650, 764
BstDSI CCRYGG 2 cut(s) 21, 276
BstENI CCTNNNNNAGG 1 cut(s) 709
BstF5I GGATG 5 cut(s) 42, 130, 722, 747, 993
BstKTI GATC 8 cut(s) 144, 196, 233, 605, 890, 935, 1008, 1108
BstMAI GTCTC 1 cut(s) 417
BstMBI GATC 8 cut(s) 141, 193, 230, 602, 887, 932, 1005, 1105
BstMWI GCNNNNNNNGC 2 cut(s) 441, 800
BstNI CCWGG 4 cut(s) 33, 146, 738, 1131
BstNSI RCATGY 1 cut(s) 759
BstSCI CCNGG 4 cut(s) 31, 144, 736, 1129
BstSFI CTRYAG 2 cut(s) 204, 324
BstV1I GCAGC 3 cut(s) 190, 349, 802
BstV2I GAAGAC 2 cut(s) 487, 1059
BstX2I RGATCY 4 cut(s) 193, 230, 602, 932
BstYI RGATCY 4 cut(s) 193, 230, 602, 932
Bsu15I ATCGAT 1 cut(s) 140
BsuRI GGCC 5 cut(s) 5, 158, 879, 903, 1050
BsuTUI ATCGAT 1 cut(s) 140
BtgI CCRYGG 2 cut(s) 21, 276
BtsCI GGATG 5 cut(s) 42, 130, 722, 747, 993
BtsIMutI CAGTG 1 cut(s) 61
Cfr10I RCCGGY 1 cut(s) 524
Cfr13I GGNCC 4 cut(s) 156, 878, 1133, 1154
ClaI ATCGAT 1 cut(s) 140
CsiI ACCWGGT 2 cut(s) 736, 1129
Csp6I GTAC 2 cut(s) 321, 329
CspAI ACCGGT 1 cut(s) 524
CviQI GTAC 2 cut(s) 321, 329
DdeI CTNAG 3 cut(s) 599, 650, 764
DpnI GATC 8 cut(s) 143, 195, 232, 604, 889, 934, 1007, 1107
DpnII GATC 8 cut(s) 141, 193, 230, 602, 887, 932, 1005, 1105
EaeI YGGCCR 2 cut(s) 3, 1048
Eam1104I CTCTTC 5 cut(s) 385, 423, 693, 1014, 1123
EarI CTCTTC 5 cut(s) 385, 423, 693, 1014, 1123
Eco130I CCWWGG 3 cut(s) 21, 276, 874
Eco24I GRGCYC 2 cut(s) 664, 705
Eco47I GGWCC 2 cut(s) 1133, 1154
Eco57I CTGAAG 1 cut(s) 274
EcoNI CCTNNNNNAGG 1 cut(s) 709
EcoO109I RGGNCCY 1 cut(s) 878
EcoRII CCWGG 4 cut(s) 31, 144, 736, 1129
EcoT14I CCWWGG 3 cut(s) 21, 276, 874
EcoT38I GRGCYC 2 cut(s) 664, 705
ErhI CCWWGG 3 cut(s) 21, 276, 874
FauNDI CATATG 1 cut(s) 187
FblI GTMKAC 1 cut(s) 733
Fnu4HI GCNGC 3 cut(s) 204, 338, 816
FokI GGATG 5 cut(s) 49, 137, 729, 734, 980
FriOI GRGCYC 2 cut(s) 664, 705
Fsp4HI GCNGC 3 cut(s) 204, 338, 816
FspBI CTAG 2 cut(s) 711, 875
GluI GCNGC 3 cut(s) 204, 338, 816
HaeIII GGCC 5 cut(s) 5, 158, 879, 903, 1050
HapII CCGG 3 cut(s) 525, 751, 1047
HincII GTYRAC 1 cut(s) 784
HindII GTYRAC 1 cut(s) 784
HinfI GANTC 5 cut(s) 50, 113, 248, 808, 968
HpaII CCGG 3 cut(s) 525, 751, 1047
HphI GGTGA 1 cut(s) 161
Hpy166II GTNNAC 3 cut(s) 247, 734, 784
Hpy188I TCNGA 7 cut(s) 118, 293, 536, 602, 622, 767, 923
Hpy188III TCNNGA 2 cut(s) 197, 751
Hpy8I GTNNAC 3 cut(s) 247, 734, 784
HpyAV CCTTC 8 cut(s) 327, 350, 604, 649, 949, 985, 989, 1103
HpyCH4III ACNGT 3 cut(s) 325, 505, 788
HpyCH4IV ACGT 1 cut(s) 615
HpyCH4V TGCA 5 cut(s) 206, 455, 516, 794, 911
HpyF10VI GCNNNNNNNGC 2 cut(s) 441, 800
HpyF3I CTNAG 3 cut(s) 599, 650, 764
HpySE526I ACGT 1 cut(s) 615
Kpn2I TCCGGA 1 cut(s) 750
Kzo9I GATC 8 cut(s) 141, 193, 230, 602, 887, 932, 1005, 1105
LguI GCTCTTC 2 cut(s) 385, 693
LmnI GCTCC 2 cut(s) 28, 580
Lsp1109I GCAGC 3 cut(s) 190, 349, 802
LweI GCATC 4 cut(s) 453, 781, 920, 1002
MabI ACCWGGT 2 cut(s) 736, 1129
MaeI CTAG 2 cut(s) 711, 875
MaeII ACGT 1 cut(s) 615
MaeIII GTNAC 2 cut(s) 640, 740
MalI GATC 8 cut(s) 143, 195, 232, 604, 889, 934, 1007, 1107
MboI GATC 8 cut(s) 141, 193, 230, 602, 887, 932, 1005, 1105
MflI RGATCY 4 cut(s) 193, 230, 602, 932
MhlI GDGCHC 2 cut(s) 664, 705
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 107, 471, 530, 545, 820
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 59, 122, 242, 977
MmeI TCCRAC 2 cut(s) 285, 602
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 1 cut(s) 750
MroXI GAANNNNTTC 2 cut(s) 593, 616
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 237, 500
MslI CAYNNNNRTG 1 cut(s) 564
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 340
MspI CCGG 3 cut(s) 525, 751, 1047
MspR9I CCNGG 4 cut(s) 33, 146, 738, 1131
MvaI CCWGG 4 cut(s) 33, 146, 738, 1131
MwoI GCNNNNNNNGC 2 cut(s) 441, 800
NcoI CCATGG 2 cut(s) 21, 276
NdeI CATATG 1 cut(s) 187
NdeII GATC 8 cut(s) 141, 193, 230, 602, 887, 932, 1005, 1105
NlaIV GGNNCC 3 cut(s) 30, 880, 1155
NmuCI GTSAC 1 cut(s) 740
NspI RCATGY 1 cut(s) 759
NspV TTCGAA 1 cut(s) 824
PciSI GCTCTTC 2 cut(s) 385, 693
PdmI GAANNNNTTC 2 cut(s) 593, 616
PfeI GAWTC 1 cut(s) 808
PflFI GACNNNGTC 1 cut(s) 738
PflMI CCANNNNNTGG 1 cut(s) 631
PinAI ACCGGT 1 cut(s) 524
PkrI GCNGC 3 cut(s) 205, 339, 817
PleI GAGTC 4 cut(s) 58, 121, 242, 976
PpsI GAGTC 4 cut(s) 58, 121, 242, 976
PsiI TTATAA 1 cut(s) 551
Psp1406I AACGTT 1 cut(s) 615
Psp6I CCWGG 4 cut(s) 31, 144, 736, 1129
PspGI CCWGG 4 cut(s) 31, 144, 736, 1129
PspN4I GGNNCC 3 cut(s) 30, 880, 1155
PspPI GGNCC 4 cut(s) 156, 878, 1133, 1154
PstI CTGCAG 1 cut(s) 208
PsuI RGATCY 4 cut(s) 193, 230, 602, 932
PsyI GACNNNGTC 1 cut(s) 738
PvuII CAGCTG 1 cut(s) 340
RsaI GTAC 2 cut(s) 322, 330
RsaNI GTAC 2 cut(s) 321, 329
RseI CAYNNNNRTG 1 cut(s) 564
SapI GCTCTTC 2 cut(s) 385, 693
SaqAI TTAA 2 cut(s) 237, 500
SatI GCNGC 3 cut(s) 204, 338, 816
Sau3AI GATC 8 cut(s) 141, 193, 230, 602, 887, 932, 1005, 1105
Sau96I GGNCC 4 cut(s) 156, 878, 1133, 1154
SchI GAGTC 4 cut(s) 59, 122, 242, 977
ScrFI CCNGG 4 cut(s) 33, 146, 738, 1131
SduI GDGCHC 2 cut(s) 664, 705
SexAI ACCWGGT 2 cut(s) 736, 1129
SfaNI GCATC 4 cut(s) 453, 781, 920, 1002
SfcI CTRYAG 2 cut(s) 204, 324
SfuI TTCGAA 1 cut(s) 824
SinI GGWCC 2 cut(s) 1133, 1154
SmiMI CAYNNNNRTG 1 cut(s) 564
SmlI CTYRAG 2 cut(s) 197, 636
SmoI CTYRAG 2 cut(s) 197, 636
Sse9I AATT 5 cut(s) 107, 471, 530, 545, 820
SspMI CTAG 2 cut(s) 711, 875
StyD4I CCNGG 4 cut(s) 31, 144, 736, 1129
StyI CCWWGG 3 cut(s) 21, 276, 874
TaaI ACNGT 3 cut(s) 325, 505, 788
TaiI ACGT 1 cut(s) 618
TaqI TCGA 4 cut(s) 140, 438, 610, 824
TasI AATT 5 cut(s) 107, 471, 530, 545, 820
TfiI GAWTC 1 cut(s) 808
Tru1I TTAA 2 cut(s) 237, 500
Tru9I TTAA 2 cut(s) 237, 500
TscAI CASTG 1 cut(s) 61
TseFI GTSAC 1 cut(s) 740
TseI GCWGC 3 cut(s) 203, 337, 815
Tsp45I GTSAC 1 cut(s) 740
TspDTI ATGAA 7 cut(s) 96, 204, 249, 255, 855, 1160, 1172
TspGWI ACGGA 3 cut(s) 137, 440, 596
TspRI CASTG 1 cut(s) 61
Tth111I GACNNNGTC 1 cut(s) 738
Van91I CCANNNNNTGG 1 cut(s) 631
VpaK11BI GGWCC 2 cut(s) 1133, 1154
XagI CCTNNNNNAGG 1 cut(s) 709
XapI RAATTY 2 cut(s) 530, 545
XceI RCATGY 1 cut(s) 759
XmaJI CCTAGG 1 cut(s) 874
XmiI GTMKAC 1 cut(s) 733
XmnI GAANNNNTTC 2 cut(s) 593, 616
XspI CTAG 2 cut(s) 711, 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.