Rh1CG156300

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000074
Physical Location & Seq
Forward (+)
34653376 .. 34656105
2730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG156300.1

Sequence Viewer

Length: 1551 bp
ATGGATGGGAGCGGCATGCGATTCAGTGAACCGAATTACCATGGTTGGTCTGTAGATGAGGATGACTTTTCAGATGAGTACGAAGAGTTATTCTCGGATGAGGAAGCTTCGCAGAGTGCAAATATGGATGAGAATCTGGATTGTCTACACTTCAATGGCAAGAAGTATGAAGATCTTAGATCCTCTGATATGATTGGTGTTGAGTTTAGCAGCGTCAAGGCAGTGGACACATTCTATGCTTACTATTCACTTGCCATGGGCTTCAGTTTCCGAAAGGAAAAGTTGTGTCGAAATGCAGCACAAGTGGTGGTGAGAAGACAGTTAGTGTGTTCAAAGGAGGGTGAGAGAAAAAAAAGGGGCAAGTCTGATCCTAGTTTTGCATCAGAAATCATTTCATGCGCCAAAAATCTTAGTCCACCTCATGGGACAAAACCGGTCTGCAAGAGGAAGACAGTTAACCAGAAACCAATCGTGGAAGATGCTGATACAAGAAGTATGAAACGTTCTGGGAAGCAGTTTGGTGATGGTGAACATGAAAAAAAAAGGCAGCGCCCTCCACAAAGAAATATTACCAGAGGTAATTGTCAAGCCCGTATCACAGCACGCCGATGCAAGGAAAATGGTGTCTTCCGTGTGGTCCAATTCATCACCGAACATAACCACGACCTTGCTACAACAGAGTTTGTTCCCTTCCTCCGATCCCACCGCAAGGTTCGGGACCATGACGTTGCTCAGGTAACAGCACTTAAGAAAGTCTCTGTTGGTACTTGCCGGGCTTATGAGTTGTTGGTCCACCAAGCCGGTGGCCATGAATTTGTTGGTTTCCTCATAAAAGATTTGTATAACAAGATGGACTCTGAAAGGAAGGAACTCATGGTTGATGGTGACGCCCAGTCCACAATCAGTTTCATGAATTTGAAAGCATCTAAAGAGGCGGAGTTTTTCTGTTTGTTCAGTGTTGATGCCGAAGCTTCATTCTCAGATGAGGCATATGAAGAAATCACTAACTGTCTTAGTCGACTAATGGTTAGGTCCAAAACATTCAAGAGATGCAAAGATAGTCAGCCACCAGAAACTGTTGATGGTCTACACCCTAATGTGATTAGGGATCCGAACGTGTGCAAAACCAAGGGCACTCATTCCAGGCATTCCACCAGTGTTGAGGTTGAGAGGGATCAGCCAGGAGGGAGGGGTTGTGGATTTTGCAGCCGGCCAGGTCATAATGTACGCACTTGTGCACTGCTAGCTGCACAAAATGGGGGGGAAAAGGATGAACCTCGTCTCCAAAGAGCACGAAACAGCTCCATTGATGCTAGCTTGCAGTCTACTCCGGGTTCCAATAGATACAAGGGTCCAGCTGGTTTCACAAACATTGGTCAGATTGATGAGGATGATGCTTTCCTCAATCAAACTAGCAGTCAACATATGTTGCATCATGTTGAAGAATCTAGGACGTTTGACTTTTTTACCGGTCACGACACCTTTTTGGCTTCCTTGAGTGCTCCATCTGCAAATCTAAATGGTGGGAACACATTCGTGCAGCCTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

516

Amino Acids

57.97

Weight (kDa)

7.0

Isoelectric Point (pI)

43.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 77 - 122 7.7e-07 FAR1 DNA-binding domain
FAR1 PF03101 172 - 224 1.3e-07 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000074)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21861 FvH4_2g06391 FvH4_2g06392 FvH4_2g14572 FvH4_2g27932 FvH4_3g22671 FvH4_3g22671 FvH4_4g04121 FvH4_4g09442 FvH4_4g15981 FvH4_4g16251 FvH4_6g17111 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g03431 FvH4_7g05771 FvH4_7g07132 FvH4_7g08581 FvH4_7g10252
prunus_persica Prupe.2G034100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0343281 RchiOBHm_Chr1g0347821 RchiOBHm_Chr2g0100541 RchiOBHm_Chr3g0491041 RchiOBHm_Chr4g0423001 RchiOBHm_Chr4g0432011 RchiOBHm_Chr4g0434601 RchiOBHm_Chr5g0039441 RchiOBHm_Chr5g0042361 RchiOBHm_Chr5g0043531 RchiOBHm_Chr5g0058531 RchiOBHm_Chr5g0079421 RchiOBHm_Chr6g0246161 RchiOBHm_Chr6g0268121 RchiOBHm_Chr7g0189611 RchiOBHm_Chr7g0227541
rosa_laevigata RLG00000002090 RLG00000006173 RLG00000007766 RLG00000008219 RLG00000010624 RLG00000011272 RLG00000012843 RLG00000012844 RLG00000013648 RLG00000013801 RLG00000013802 RLG00000017300 RLG00000018444 RLG00000018720 RLG00000020793 RLG00000022697 RLG00000022804 RLG00000022805 RLG00000033143 RLG00000033144 RLG00000033915 RLG00000033917 RLG00000033919 RLG00000034190 RLG00000034403
rosa_multiflora Rmu_co7984152.1_g000001 Rmu_co8352885.1_g000001 Rmu_co8410147.1_g000001 Rmu_co8473903.1_g000001 Rmu_co8473903.1_g000002 Rmu_sc0000077.1_g000044 Rmu_sc0000279.1_g000050 Rmu_sc0000670.1_g000017 Rmu_sc0000837.1_g000064 Rmu_sc0000837.1_g000065 Rmu_sc0000894.1_g000068 Rmu_sc0000931.1_g000006 Rmu_sc0001103.1_g000027 Rmu_sc0001103.1_g000028 Rmu_sc0001955.1_g000017 Rmu_sc0002791.1_g000004 Rmu_sc0003047.1_g000009 Rmu_sc0003047.1_g000010 Rmu_sc0003063.1_g000011 Rmu_sc0003179.1_g000016 Rmu_sc0003179.1_g000017 Rmu_sc0003226.1_g000022 Rmu_sc0004051.1_g000001 Rmu_sc0004482.1_g000011 Rmu_sc0005394.1_g000008 Rmu_sc0005394.1_g000009 Rmu_sc0005712.1_g000027 Rmu_sc0006514.1_g000025 Rmu_sc0006514.1_g000026 Rmu_sc0006675.1_g000007 Rmu_sc0007180.1_g000003 Rmu_sc0007180.1_g000004 Rmu_sc0007877.1_g000020 Rmu_sc0011079.1_g000009 Rmu_sc0031869.1_g000001 Rmu_sc0031870.1_g000002 Rmu_ssc0000158.1_g000017 Rmu_ssc0000161.1_g000025 Rmu_ssc0000161.1_g000026 Rmu_ssc0000171.1_g000002 Rmu_ssc0000171.1_g000008 Rmu_ssc0000387.1_g000014 Rmu_ssc0000400.1_g000101
rosa_roxburghii Rroxscaffold_1G00000400 Rroxscaffold_1G00004080 Rroxscaffold_1G00009710 Rroxscaffold_1G00009720 Rroxscaffold_1G00024410 Rroxscaffold_1G00031840 Rroxscaffold_1G00040580 Rroxscaffold_1G00041710 Rroxscaffold_1G00041760 Rroxscaffold_2G00118130 Rroxscaffold_2G00118140 Rroxscaffold_2G00118640 Rroxscaffold_2G00140930 Rroxscaffold_3G00226560 Rroxscaffold_4G00313790 Rroxscaffold_4G00321730 Rroxscaffold_5G00348100 Rroxscaffold_5G00349980 Rroxscaffold_5G00350840 Rroxscaffold_7G00164330 Rroxscaffold_7G00196700
rosa_rugosa Rorug01G0094800 Rorug01G0106400 Rorug01G0106400 Rorug02G0362800 Rorug02G0564700 Rorug02G0564700 Rorug02G0570400 Rorug03G0287500 Rorug03G0329600 Rorug03G0332900 Rorug03G0333000 Rorug03G0343100 Rorug04G0031600 Rorug04G0031700 Rorug04G0031800 Rorug04G0055600 Rorug04G0065700 Rorug04G0189800 Rorug05G0103100 Rorug05G0103200 Rorug05G0106800 Rorug05G0179100 Rorug05G0179600 Rorug06G0008300 Rorug06G0184200 Rorug06G0184300 Rorug07G0181900 Rorug07G0187700 Rorug07G0283400
rosa_samantha Rh1AG090200 Rh1AG168900 Rh1CG039900 Rh1CG040000 Rh1CG055300 Rh1CG156300 Rh1DG029400 Rh1DG029500 Rh1DG029600 Rh1DG059200 Rh1DG065400 Rh1DG177000 Rh2AG354800 Rh2AG641900 Rh2AG642000 Rh2AG647200 Rh2AG647300 Rh2BG141800 Rh2BG260500 Rh2BG305300 Rh2BG336200 Rh2BG336300 Rh2BG336400 Rh2BG593800 Rh2BG593900 Rh2CG144100 Rh2CG299600 Rh2CG299700 Rh2DG143500 Rh2DG336800 Rh2DG571700 Rh2DG581400 Rh3AG246400 Rh3AG295600 Rh3BG122800 Rh3BG264600 Rh3BG310900 Rh3BG348800 Rh3CG308000 Rh3DG285900 Rh3DG304600 Rh4AG134700 Rh4AG164700 Rh4AG164800 Rh4AG164900 Rh4AG249400 Rh4AG249500 Rh4AG249600 Rh4AG249700 Rh4AG336400 Rh4AG368500 Rh4BG111500 Rh4BG130000 Rh4BG130100 Rh4BG130200 Rh4BG254800 Rh4BG254900 Rh4BG255000 Rh4BG388500 Rh4CG155300 Rh4CG155400 Rh4DG058400 Rh4DG058500 Rh4DG058600 Rh4DG059300 Rh4DG120300 Rh4DG120400 Rh4DG338900 Rh4DG374800 Rh4DG374900 Rh4DG375000 Rh5AG195100 Rh5AG266000 Rh5AG266400 Rh5AG305300 Rh5AG365400 Rh5AG375400 Rh5BG270600 Rh5CG062000 Rh5CG213600 Rh5CG229700 Rh5CG248000 Rh5CG248200 Rh5CG497300 Rh5CG497400 Rh5CG559300 Rh5DG179800 Rh5DG179900 Rh5DG239100 Rh5DG239200 Rh5DG278500 Rh5DG300000 Rh5DG300100 Rh5DG307900 Rh6AG173600 Rh6AG197900 Rh6AG315200 Rh6BG067100 Rh6BG076700 Rh6BG076800 Rh6BG101100 Rh6BG101200 Rh6BG200000 Rh6BG231600 Rh6BG324600 Rh6CG172800 Rh6CG200900 Rh6CG201000 Rh6CG235000 Rh6CG276000 Rh6CG420300 Rh6CG420400 Rh6DG498900 Rh7AG178800 Rh7AG275200 Rh7AG328700 Rh7AG328800 Rh7AG328900 Rh7AG353700 Rh7AG353800 Rh7AG367500 Rh7AG367600 Rh7AG394900 Rh7BG178500 Rh7BG321900 Rh7CG048800 Rh7CG346100 Rh7CG346200 Rh7CG346300 Rh7CG371300 Rh7CG385900 Rh7CG425400 Rh7DG106500 Rh7DG106600 Rh7DG352900 Rh7DG353000 Rh7DG361500 Rh7DG361600 Rh7DG362400 Rh7DG362500 Rh7DG363300
rosa_wichuraiana Rw0G002270 Rw0G002760 Rw0G019200 Rw1G000250 Rw1G008950 Rw1G010390 Rw1G012150 Rw1G039080 Rw2G001980 Rw2G003180 Rw2G003190 Rw4G008560 Rw4G010220 Rw4G012150 Rw5G005520 Rw5G009100 Rw5G024930 Rw5G035130 Rw5G047260 Rw5G048530 Rw6G007560 Rw6G016630 Rw6G041510 Rw7G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 422
AccBSI CCGCTC 1 cut(s) 12
AccI GTMKAC 4 cut(s) 145, 1018, 1087, 1325
AciI CCGC 3 cut(s) 12, 706, 935
AclI AACGTT 1 cut(s) 502
AclWI GGATC 6 cut(s) 174, 362, 693, 1103, 1116, 1182
AcoI YGGCCR 2 cut(s) 805, 1211
AcsI RAATTY 2 cut(s) 812, 913
AcuI CTGAAG 1 cut(s) 247
AcyI GRCGYC 1 cut(s) 888
AfaI GTAC 3 cut(s) 80, 766, 1227
AfiI CCNNNNNNNGG 3 cut(s) 422, 613, 709
AflII CTTAAG 1 cut(s) 746
AflIII ACRYGT 1 cut(s) 1116
AgeI ACCGGT 2 cut(s) 433, 1469
AgsI TTSAA 5 cut(s) 154, 333, 919, 1045, 1442
AhdI GACNNNNNGTC 1 cut(s) 892
AjnI CCWGG 3 cut(s) 1142, 1180, 1213
AleI CACNNNNGTG 1 cut(s) 1535
AloI GAACNNNNNNTCC 2 cut(s) 1266, 1298
AluBI AGCT 6 cut(s) 107, 971, 1247, 1302, 1317, 1358
AluI AGCT 6 cut(s) 107, 971, 1247, 1302, 1317, 1358
Alw21I GWGCWC 3 cut(s) 1240, 1294, 1504
Alw26I GTCTC 2 cut(s) 760, 1286
Alw44I GTGCAC 1 cut(s) 1236
AlwI GGATC 6 cut(s) 174, 362, 693, 1103, 1116, 1182
AlwNI CAGNNNCTG 1 cut(s) 1076
AoxI GGCC 2 cut(s) 805, 1211
ApaLI GTGCAC 1 cut(s) 1236
ApeKI GCWGC 6 cut(s) 210, 296, 547, 1206, 1247, 1540
ApoI RAATTY 2 cut(s) 812, 913
ArsI GACNNNNNNTTYG 2 cut(s) 1402, 1434
AsiGI ACCGGT 2 cut(s) 433, 1469
Asp700I GAANNNNTTC 1 cut(s) 1532
AspLEI GCGC 2 cut(s) 401, 552
AspS9I GGNCC 5 cut(s) 637, 718, 790, 1032, 1352
AsuC2I CCSGG 2 cut(s) 773, 1332
AsuHPI GGTGA 6 cut(s) 322, 353, 533, 539, 640, 896
AsuNHI GCTAGC 2 cut(s) 1243, 1313
AvaII GGWCC 5 cut(s) 637, 718, 790, 1032, 1352
BaeGI GKGCMC 2 cut(s) 1136, 1240
BaeI ACNNNNGTAYC 2 cut(s) 1336, 1369
BalI TGGCCA 1 cut(s) 807
BamHI GGATCC 1 cut(s) 1108
BbsI GAAGAC 3 cut(s) 322, 455, 619
Bbv12I GWGCWC 3 cut(s) 1240, 1294, 1504
BbvI GCAGC 5 cut(s) 222, 308, 559, 1218, 1234
BccI CCATC 5 cut(s) 518, 844, 875, 1076, 1513
BciT130I CCWGG 3 cut(s) 1144, 1182, 1215
BcnI CCSGG 2 cut(s) 773, 1332
BcoDI GTCTC 2 cut(s) 760, 1286
BfaI CTAG 5 cut(s) 372, 1244, 1314, 1413, 1449
BfmI CTRYAG 1 cut(s) 51
BfoI RGCGCY 1 cut(s) 553
BfrI CTTAAG 1 cut(s) 746
BglII AGATCT 1 cut(s) 172
BisI GCNGC 7 cut(s) 13, 211, 297, 548, 1207, 1248, 1541
BlsI GCNGC 7 cut(s) 14, 212, 298, 549, 1208, 1249, 1542
Bme1390I CCNGG 5 cut(s) 773, 1144, 1182, 1215, 1332
Bme18I GGWCC 5 cut(s) 637, 718, 790, 1032, 1352
BmeRI GACNNNNNGTC 1 cut(s) 892
BmgT120I GGNCC 5 cut(s) 637, 718, 790, 1032, 1352
BmiI GGNNCC 4 cut(s) 719, 1110, 1336, 1353
BmrFI CCNGG 5 cut(s) 773, 1144, 1182, 1215, 1332
BmrI ACTGGG 1 cut(s) 886
BmsI GCATC 9 cut(s) 389, 469, 599, 932, 952, 1040, 1300, 1384, 1441
BmtI GCTAGC 2 cut(s) 1247, 1317
BmuI ACTGGG 1 cut(s) 886
BpiI GAAGAC 3 cut(s) 322, 455, 619
BplI GAGNNNNNCTC 2 cut(s) 77, 109
Bpu10I CCTNAGC 1 cut(s) 732
BpuEI CTTGAG 1 cut(s) 1516
BpuMI CCSGG 2 cut(s) 773, 1332
BsaBI GATNNNNATC 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 888
BsaJI CCNNGG 3 cut(s) 40, 255, 1128
BsaWI WCCGGW 2 cut(s) 433, 1469
BsaXI ACNNNNNCTCC 4 cut(s) 1180, 1210, 1266, 1296
Bsc4I CCNNNNNNNGG 3 cut(s) 422, 613, 709
Bse118I RCCGGY 4 cut(s) 433, 800, 1209, 1469
Bse1I ACTGG 2 cut(s) 892, 1155
Bse8I GATNNNNATC 1 cut(s) 132
BseBI CCWGG 3 cut(s) 1144, 1182, 1215
BseDI CCNNGG 3 cut(s) 40, 255, 1128
BseGI GGATG 6 cut(s) 10, 67, 103, 133, 1276, 1396
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 3 cut(s) 422, 613, 709
BseMII CTCAG 2 cut(s) 746, 993
BseNI ACTGG 2 cut(s) 892, 1155
BseSI GKGCMC 2 cut(s) 1136, 1240
BseXI GCAGC 5 cut(s) 222, 308, 559, 1218, 1234
BsgI GTGCAG 1 cut(s) 1233
BshFI GGCC 2 cut(s) 807, 1213
BshTI ACCGGT 2 cut(s) 433, 1469
BsiHKAI GWGCWC 3 cut(s) 1240, 1294, 1504
BsiSI CCGG 6 cut(s) 434, 772, 801, 1210, 1331, 1470
BslFI GGGAC 2 cut(s) 439, 731
BslI CCNNNNNNNGG 3 cut(s) 422, 613, 709
BsmAI GTCTC 2 cut(s) 760, 1286
BsmBI CGTCTC 1 cut(s) 1286
BsmFI GGGAC 2 cut(s) 439, 731
BsmI GAATGC 1 cut(s) 1147
BsnI GGCC 2 cut(s) 807, 1213
Bsp1286I GDGCHC 4 cut(s) 1136, 1240, 1294, 1504
Bsp143I GATC 6 cut(s) 172, 179, 367, 698, 1108, 1174
Bsp19I CCATGG 2 cut(s) 40, 255
BspACI CCGC 3 cut(s) 12, 706, 935
BspANI GGCC 2 cut(s) 807, 1213
BspCNI CTCAG 2 cut(s) 745, 992
BspHI TCATGA 1 cut(s) 909
BspLI GGNNCC 4 cut(s) 719, 1110, 1336, 1353
BspOI GCTAGC 2 cut(s) 1247, 1317
BspPI GGATC 6 cut(s) 174, 362, 693, 1103, 1116, 1182
BspTI CTTAAG 1 cut(s) 746
BsrBI CCGCTC 1 cut(s) 12
BsrFI RCCGGY 4 cut(s) 433, 800, 1209, 1469
BsrI ACTGG 2 cut(s) 892, 1155
BssAI RCCGGY 4 cut(s) 433, 800, 1209, 1469
BssECI CCNNGG 3 cut(s) 40, 255, 1128
BssMI GATC 6 cut(s) 172, 179, 367, 698, 1108, 1174
BssNI GRCGYC 1 cut(s) 888
BssT1I CCWWGG 3 cut(s) 40, 255, 1128
Bst2UI CCWGG 3 cut(s) 1144, 1182, 1215
Bst4CI ACNGT 4 cut(s) 321, 454, 1010, 1078
Bst6I CTCTTC 1 cut(s) 78
BstACI GRCGYC 1 cut(s) 888
BstAFI CTTAAG 1 cut(s) 746
BstC8I GCNNGC 6 cut(s) 17, 604, 1211, 1245, 1315, 1319
BstDEI CTNAG 5 cut(s) 176, 410, 732, 979, 1013
BstDSI CCRYGG 2 cut(s) 40, 255
BstF5I GGATG 6 cut(s) 10, 67, 103, 133, 1276, 1396
BstH2I RGCGCY 1 cut(s) 553
BstHHI GCGC 2 cut(s) 401, 552
BstKTI GATC 6 cut(s) 175, 182, 370, 701, 1111, 1177
BstMAI GTCTC 2 cut(s) 760, 1286
BstMBI GATC 6 cut(s) 172, 179, 367, 698, 1108, 1174
BstMWI GCNNNNNNNGC 2 cut(s) 1244, 1508
BstNI CCWGG 3 cut(s) 1144, 1182, 1215
BstNSI RCATGY 1 cut(s) 19
BstSCI CCNGG 5 cut(s) 771, 1142, 1180, 1213, 1330
BstSFI CTRYAG 1 cut(s) 51
BstSLI GKGCMC 2 cut(s) 1136, 1240
BstV1I GCAGC 5 cut(s) 222, 308, 559, 1218, 1234
BstV2I GAAGAC 3 cut(s) 322, 455, 619
BstX2I RGATCY 3 cut(s) 172, 179, 1108
BstXI CCANNNNNNTGG 1 cut(s) 803
BstYI RGATCY 3 cut(s) 172, 179, 1108
BsuRI GGCC 2 cut(s) 807, 1213
BtgI CCRYGG 2 cut(s) 40, 255
BtsCI GGATG 6 cut(s) 10, 67, 103, 133, 1276, 1396
BtsI GCAGTG 2 cut(s) 228, 1238
BtsIMutI CAGTG 5 cut(s) 31, 228, 961, 1162, 1238
Cac8I GCNNGC 6 cut(s) 17, 604, 1211, 1245, 1315, 1319
CaiI CAGNNNCTG 1 cut(s) 1076
CciI TCATGA 1 cut(s) 909
CfoI GCGC 2 cut(s) 401, 552
Cfr10I RCCGGY 4 cut(s) 433, 800, 1209, 1469
Cfr13I GGNCC 5 cut(s) 637, 718, 790, 1032, 1352
CseI GACGC 2 cut(s) 202, 896
Csp6I GTAC 3 cut(s) 79, 765, 1226
CspAI ACCGGT 2 cut(s) 433, 1469
CspCI CAANNNNNGTGG 2 cut(s) 1141, 1176
CviQI GTAC 3 cut(s) 79, 765, 1226
DdeI CTNAG 5 cut(s) 176, 410, 732, 979, 1013
DpnI GATC 6 cut(s) 174, 181, 369, 700, 1110, 1176
DpnII GATC 6 cut(s) 172, 179, 367, 698, 1108, 1174
DriI GACNNNNNGTC 1 cut(s) 892
EaeI YGGCCR 2 cut(s) 805, 1211
Eam1104I CTCTTC 1 cut(s) 78
Eam1105I GACNNNNNGTC 1 cut(s) 892
EarI CTCTTC 1 cut(s) 78
EciI GGCGGA 1 cut(s) 950
Eco130I CCWWGG 3 cut(s) 40, 255, 1128
Eco47I GGWCC 5 cut(s) 637, 718, 790, 1032, 1352
Eco57I CTGAAG 1 cut(s) 247
EcoRII CCWGG 3 cut(s) 1142, 1180, 1213
EcoT14I CCWWGG 3 cut(s) 40, 255, 1128
ErhI CCWWGG 3 cut(s) 40, 255, 1128
Esp3I CGTCTC 1 cut(s) 1286
FaqI GGGAC 2 cut(s) 439, 731
FauNDI CATATG 2 cut(s) 991, 1425
FblI GTMKAC 4 cut(s) 145, 1018, 1087, 1325
Fnu4HI GCNGC 7 cut(s) 13, 211, 297, 548, 1207, 1248, 1541
FokI GGATG 6 cut(s) 17, 74, 110, 140, 1283, 1403
Fsp4HI GCNGC 7 cut(s) 13, 211, 297, 548, 1207, 1248, 1541
FspBI CTAG 5 cut(s) 372, 1244, 1314, 1413, 1449
GlaI GCGC 2 cut(s) 400, 551
GluI GCNGC 7 cut(s) 13, 211, 297, 548, 1207, 1248, 1541
HaeII RGCGCY 1 cut(s) 553
HaeIII GGCC 2 cut(s) 807, 1213
HapII CCGG 6 cut(s) 434, 772, 801, 1210, 1331, 1470
HgaI GACGC 2 cut(s) 202, 896
HhaI GCGC 2 cut(s) 401, 552
Hin1I GRCGYC 1 cut(s) 888
Hin6I GCGC 2 cut(s) 399, 550
HinP1I GCGC 2 cut(s) 399, 550
HincII GTYRAC 3 cut(s) 457, 1019, 1421
HindII GTYRAC 3 cut(s) 457, 1019, 1421
HindIII AAGCTT 2 cut(s) 105, 969
HinfI GANTC 4 cut(s) 21, 133, 854, 1445
HpaI GTTAAC 1 cut(s) 457
HpaII CCGG 6 cut(s) 434, 772, 801, 1210, 1331, 1470
HphI GGTGA 6 cut(s) 322, 353, 533, 539, 640, 896
Hpy188III TCNNGA 5 cut(s) 137, 716, 910, 1045, 1475
HpyAV CCTTC 2 cut(s) 700, 859
HpyCH4III ACNGT 4 cut(s) 321, 454, 1010, 1078
HpyCH4IV ACGT 4 cut(s) 502, 726, 1116, 1454
HpyF10VI GCNNNNNNNGC 2 cut(s) 1244, 1508
HpyF3I CTNAG 5 cut(s) 176, 410, 732, 979, 1013
HpySE526I ACGT 4 cut(s) 502, 726, 1116, 1454
Hsp92I GRCGYC 1 cut(s) 888
HspAI GCGC 2 cut(s) 399, 550
KroI GCCGGC 1 cut(s) 1209
KroNI GCCGGC 1 cut(s) 1211
KspAI GTTAAC 1 cut(s) 457
Kzo9I GATC 6 cut(s) 172, 179, 367, 698, 1108, 1174
LmnI GCTCC 3 cut(s) 9, 1307, 1507
Lsp1109I GCAGC 5 cut(s) 222, 308, 559, 1218, 1234
LweI GCATC 9 cut(s) 389, 469, 599, 932, 952, 1040, 1300, 1384, 1441
MaeI CTAG 5 cut(s) 372, 1244, 1314, 1413, 1449
MaeII ACGT 4 cut(s) 502, 726, 1116, 1454
MaeIII GTNAC 3 cut(s) 736, 884, 1472
MalI GATC 6 cut(s) 174, 181, 369, 700, 1110, 1176
MbiI CCGCTC 1 cut(s) 12
MboI GATC 6 cut(s) 172, 179, 367, 698, 1108, 1174
MboII GAAGA 8 cut(s) 95, 182, 327, 460, 488, 619, 1007, 1454
MflI RGATCY 3 cut(s) 172, 179, 1108
MhlI GDGCHC 4 cut(s) 1136, 1240, 1294, 1504
MlsI TGGCCA 1 cut(s) 807
MluCI AATT 5 cut(s) 34, 580, 641, 812, 913
MluNI TGGCCA 1 cut(s) 807
MlyI GAGTC 1 cut(s) 848
Mox20I TGGCCA 1 cut(s) 807
MroNI GCCGGC 1 cut(s) 1209
MroXI GAANNNNTTC 1 cut(s) 1532
MscI TGGCCA 1 cut(s) 807
MseI TTAA 2 cut(s) 456, 747
MslI CAYNNNNRTG 4 cut(s) 153, 607, 1095, 1535
Msp20I TGGCCA 1 cut(s) 807
MspA1I CMGCKG 1 cut(s) 1358
MspCI CTTAAG 1 cut(s) 746
MspI CCGG 6 cut(s) 434, 772, 801, 1210, 1331, 1470
MspR9I CCNGG 5 cut(s) 773, 1144, 1182, 1215, 1332
Mva1269I GAATGC 1 cut(s) 1147
MvaI CCWGG 3 cut(s) 1144, 1182, 1215
MwoI GCNNNNNNNGC 2 cut(s) 1244, 1508
NaeI GCCGGC 1 cut(s) 1211
NciI CCSGG 2 cut(s) 773, 1332
NcoI CCATGG 2 cut(s) 40, 255
NdeI CATATG 2 cut(s) 991, 1425
NdeII GATC 6 cut(s) 172, 179, 367, 698, 1108, 1174
NgoMIV GCCGGC 1 cut(s) 1209
NheI GCTAGC 2 cut(s) 1243, 1313
NlaIV GGNNCC 4 cut(s) 719, 1110, 1336, 1353
NmuCI GTSAC 2 cut(s) 884, 1472
NspI RCATGY 1 cut(s) 19
OliI CACNNNNGTG 1 cut(s) 1535
PaeI GCATGC 1 cut(s) 19
PagI TCATGA 1 cut(s) 909
PctI GAATGC 1 cut(s) 1147
PdiI GCCGGC 1 cut(s) 1211
PdmI GAANNNNTTC 1 cut(s) 1532
PfeI GAWTC 3 cut(s) 21, 133, 1445
PflMI CCANNNNNTGG 1 cut(s) 422
PinAI ACCGGT 2 cut(s) 433, 1469
PkrI GCNGC 7 cut(s) 14, 212, 298, 549, 1208, 1249, 1542
PleI GAGTC 1 cut(s) 848
PpsI GAGTC 1 cut(s) 848
Psp1406I AACGTT 1 cut(s) 502
Psp6I CCWGG 3 cut(s) 1142, 1180, 1213
PspGI CCWGG 3 cut(s) 1142, 1180, 1213
PspN4I GGNNCC 4 cut(s) 719, 1110, 1336, 1353
PspPI GGNCC 5 cut(s) 637, 718, 790, 1032, 1352
PsrI GAACNNNNNNTAC 2 cut(s) 487, 519
PstNI CAGNNNCTG 1 cut(s) 1076
PsuI RGATCY 3 cut(s) 172, 179, 1108
PvuII CAGCTG 1 cut(s) 1358
RsaI GTAC 3 cut(s) 80, 766, 1227
RsaNI GTAC 3 cut(s) 79, 765, 1226
RseI CAYNNNNRTG 4 cut(s) 153, 607, 1095, 1535
SalI GTCGAC 1 cut(s) 1017
SaqAI TTAA 2 cut(s) 456, 747
SatI GCNGC 7 cut(s) 13, 211, 297, 548, 1207, 1248, 1541
Sau3AI GATC 6 cut(s) 172, 179, 367, 698, 1108, 1174
Sau96I GGNCC 5 cut(s) 637, 718, 790, 1032, 1352
SchI GAGTC 1 cut(s) 848
ScrFI CCNGG 5 cut(s) 773, 1144, 1182, 1215, 1332
SduI GDGCHC 4 cut(s) 1136, 1240, 1294, 1504
SfaNI GCATC 9 cut(s) 389, 469, 599, 932, 952, 1040, 1300, 1384, 1441
SfcI CTRYAG 1 cut(s) 51
SinI GGWCC 5 cut(s) 637, 718, 790, 1032, 1352
SmiMI CAYNNNNRTG 4 cut(s) 153, 607, 1095, 1535
SmlI CTYRAG 2 cut(s) 746, 1495
SmoI CTYRAG 2 cut(s) 746, 1495
SphI GCATGC 1 cut(s) 19
Sse9I AATT 5 cut(s) 34, 580, 641, 812, 913
SsiI CCGC 3 cut(s) 12, 706, 935
SspI AATATT 1 cut(s) 568
SspMI CTAG 5 cut(s) 372, 1244, 1314, 1413, 1449
StyD4I CCNGG 5 cut(s) 771, 1142, 1180, 1213, 1330
StyI CCWWGG 3 cut(s) 40, 255, 1128
TaaI ACNGT 4 cut(s) 321, 454, 1010, 1078
TaiI ACGT 4 cut(s) 505, 729, 1119, 1457
TaqI TCGA 2 cut(s) 289, 1018
TasI AATT 5 cut(s) 34, 580, 641, 812, 913
TauI GCSGC 1 cut(s) 15
TfiI GAWTC 3 cut(s) 21, 133, 1445
Tru1I TTAA 2 cut(s) 456, 747
Tru9I TTAA 2 cut(s) 456, 747
TscAI CASTG 5 cut(s) 31, 228, 961, 1162, 1245
TseFI GTSAC 2 cut(s) 884, 1472
TseI GCWGC 6 cut(s) 210, 296, 547, 1206, 1247, 1540
Tsp45I GTSAC 2 cut(s) 884, 1472
TspGWI ACGGA 1 cut(s) 620
TspRI CASTG 5 cut(s) 31, 228, 961, 1162, 1245
Van91I CCANNNNNTGG 1 cut(s) 422
Vha464I CTTAAG 1 cut(s) 746
VneI GTGCAC 1 cut(s) 1236
VpaK11BI GGWCC 5 cut(s) 637, 718, 790, 1032, 1352
XapI RAATTY 2 cut(s) 812, 913
XceI RCATGY 1 cut(s) 19
XcmI CCANNNNNNNNNTGG 2 cut(s) 800, 815
XmiI GTMKAC 4 cut(s) 145, 1018, 1087, 1325
XmnI GAANNNNTTC 1 cut(s) 1532
XspI CTAG 5 cut(s) 372, 1244, 1314, 1413, 1449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.