Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0011704

Physical Location & Seq

Genomic Coordinates Forward (+)

34695212 .. 34697868

Gene Structure 2657 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1260000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGCGCCTCCGAAGAAATCAAGGAAAAGCAAGAAAGACAGGAAATTGAGGAAAAGCAAGAGCGTGGTGGTTCCGGTTGAGGCAAAAGCCGTGGATTCGGATTGGTGGGATAGTTTCTGGCACAAGAATTCTTCAACCCAAGCAGGTTCTTCAGTATCCAATGATGAGGAGGAAGGATTTAAGTTTTTCTTTAGGGTCTCGAAAAAGACTTTCGATTACATTTGTTCACTTGTAAGAGAAGACCTGGTGTCGAGGCCGCCATCAGGGCTCATCAACATAGAAGGAAGGCTTCTCAGTGTTGAGAAACAGGTTGCAATTGCCATGAGAAGGTTGGCATCCGGGGAGTCTCAAGTCTCAGTGGGGGCTGCATTTGGGGTCGGCCAGTCCACAGTTTCTCAGGTGACTTGGAGATTCATTGAAGCATTGGAAGAGCGCGCAAAGCACCACCTCAAGTGGCCTGATTCGAATAGAATGGAAGAGATTAAGTCTGAATTTGAAGCATCCTTTGGATTGCCGAATTGCTGTGGAGCCATAGATGGTACTCACATCATTATGACCCTACCTACGGTTCAAACATCAGATGATTGGTGTGACTCAGAGGAGAACTACAGCATGCTCTTGCAGGGAATTGTTGACCATGAGATGAGATTTCTTGATATTGTGACTGGTTGGCCTGGGGGCATGACTGCTTCTAGACTGTTGAAGTGTTCGGGGTTTTACAAGCTCTGTGAAGGCGGACAGCGTTTGAATGGAGATGTTAGAAGTTTATCTGGAGGAGTAGAGATTAGAGAGTACTTAGTTGGTGGGGCTGGCTATCCTCTGCTTCCTTGGCTGATAACTCCTTTTGAAGGCAATGGCCTTCCGCCTTCCGTTTCTCCTTTTAACGCCATTCATGAGGCTGCAAGGTCGCTGGCTGTAAGAGCATTCTTGCAGTTGAAGGGCACTTGGAGAATCCTCAGCAAGGTTATGTGGAGACCTGACAAACGTAAACTTCCAAGCATTATCTTGGTATGTTGTTTGCTTCACAATATAATCATCGACAGTGGAGATATATTGGACCCGGATGTTGCTTTATCCGGCCATCATGATTCAGGATATGGAGAACAGTGCTGTAAGCAAGTTGATCCACTGGGGAGGACATTGAGGGATAACTTGATCAAACACCGGGAGCACGGCAAGCAGACTGCTACACCAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010639 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031519 GO:0031935 GO:0031936 GO:0031974 GO:0031981 GO:0032991 GO:0033043 GO:0033044 GO:0034708 GO:0035097 GO:0035098 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045815 GO:0045893 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0080090 GO:1902275 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1990234 GO:2000112 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDE_Tnp_4

Protein Analysis

400

Amino Acids

44.45

Weight (kDa)

8.26

Isoelectric Point (pI)

44.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DDE_Tnp_4	PF13359	178 - 343	6e-20	DDE superfamily endonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011704)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63270
fragaria_vesca	FvH4_2g23101
malus_domestica	MD03G1260000.v1.1 MD11G1280300.v1.1
prunus_persica	Prupe.3G034000_v2.0.a1 Prupe.8G236200_v2.0.a1
pyrus_communis	pycom03g20770
rosa_chinensis	RchiOBHm_Chr6g0290271
rosa_laevigata	RLG00000012229
rosa_multiflora	Rmu_sc0034661.1_g000001 Rmu_ssc0000208.1_g000001
rosa_roxburghii	Rroxscaffold_7G00177190
rosa_rugosa	Rorug06G0211400
rosa_samantha	Rh6AG321700 Rh6BG329000 Rh6CG334900 Rh6DG322000
rosa_wichuraiana	Rw6G027790 Rw6G027890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	134
AccB1I	GGYRCC	1 cut(s)	4
AccII	CGCG	1 cut(s)	435
AciI	CCGC	3 cut(s)	257, 735, 863
AclWI	GGATC	1 cut(s)	1118
AcoI	YGGCCR	2 cut(s)	379, 1078
AcsI	RAATTY	2 cut(s)	127, 491
AcuI	CTGAAG	1 cut(s)	135
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	2 cut(s)	541, 794
AfiI	CCNNNNNNNGG	5 cut(s)	263, 327, 565, 848, 961
AgsI	TTSAA	8 cut(s)	135, 419, 497, 572, 703, 748, 848, 937
AhdI	GACNNNNNGTC	1 cut(s)	247
AjnI	CCWGG	2 cut(s)	243, 673
AjuI	GAANNNNNNNTTGG	2 cut(s)	489, 521
AleI	CACNNNNGTG	1 cut(s)	1195
AluBI	AGCT	1 cut(s)	724
AluI	AGCT	1 cut(s)	724
Alw21I	GWGCWC	1 cut(s)	1173
Alw26I	GTCTC	4 cut(s)	202, 351, 358, 967
AlwI	GGATC	1 cut(s)	1118
AoxI	GGCC	6 cut(s)	254, 379, 455, 671, 856, 1078
ApeKI	GCWGC	2 cut(s)	365, 899
ApoI	RAATTY	2 cut(s)	127, 491
AspLEI	GCGC	3 cut(s)	7, 435, 437
AspS9I	GGNCC	1 cut(s)	1057
AsuC2I	CCSGG	3 cut(s)	340, 1061, 1166
AsuHPI	GGTGA	1 cut(s)	412
AsuII	TTCGAA	1 cut(s)	464
AvaII	GGWCC	1 cut(s)	1057
BaeGI	GKGCMC	1 cut(s)	944
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	270
BbsI	GAAGAC	1 cut(s)	246
Bbv12I	GWGCWC	1 cut(s)	1173
BbvCI	CCTCAGC	1 cut(s)	956
BbvI	GCAGC	2 cut(s)	352, 886
BccI	CCATC	3 cut(s)	268, 530, 1089
BceAI	ACGGC	2 cut(s)	74, 1189
BciT130I	CCWGG	2 cut(s)	245, 675
BciVI	GTATCC	1 cut(s)	166
BclI	TGATCA	1 cut(s)	1155
BcnI	CCSGG	3 cut(s)	340, 1061, 1166
BcoDI	GTCTC	4 cut(s)	202, 351, 358, 967
BfaI	CTAG	1 cut(s)	693
BfmI	CTRYAG	1 cut(s)	607
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	134
BfuI	GTATCC	1 cut(s)	166
BglI	GCCNNNNNGGC	1 cut(s)	265
BisI	GCNGC	3 cut(s)	257, 366, 900
BlsI	GCNGC	3 cut(s)	258, 367, 901
BmcAI	AGTACT	1 cut(s)	794
Bme1390I	CCNGG	5 cut(s)	245, 340, 675, 1061, 1166
Bme18I	GGWCC	1 cut(s)	1057
BmeRI	GACNNNNNGTC	1 cut(s)	247
BmgT120I	GGNCC	1 cut(s)	1057
BmiI	GGNNCC	4 cut(s)	6, 72, 529, 1059
BmrFI	CCNGG	5 cut(s)	245, 340, 675, 1061, 1166
BmrI	ACTGGG	1 cut(s)	1139
BmsI	GCATC	2 cut(s)	344, 509
BmuI	ACTGGG	1 cut(s)	1139
BpiI	GAAGAC	1 cut(s)	246
BpmI	CTGGAG	1 cut(s)	792
Bpu10I	CCTNAGC	1 cut(s)	956
Bpu14I	TTCGAA	1 cut(s)	464
BpuEI	CTTGAG	2 cut(s)	333, 434
BpuMI	CCSGG	3 cut(s)	340, 1061, 1166
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	202, 967
BsaJI	CCNNGG	4 cut(s)	90, 339, 674, 827
BsaWI	WCCGGW	1 cut(s)	73
Bsc4I	CCNNNNNNNGG	5 cut(s)	263, 327, 565, 848, 961
Bse1I	ACTGG	3 cut(s)	382, 670, 1134
Bse3DI	GCAATG	1 cut(s)	859
BseBI	CCWGG	2 cut(s)	245, 675
BseDI	CCNNGG	4 cut(s)	90, 339, 674, 827
BseGI	GGATG	3 cut(s)	335, 500, 1069
BseLI	CCNNNNNNNGG	5 cut(s)	263, 327, 565, 848, 961
BseMI	GCAATG	1 cut(s)	859
BseMII	CTCAG	5 cut(s)	307, 369, 410, 609, 970
BseNI	ACTGG	3 cut(s)	382, 670, 1134
BsePI	GCGCGC	1 cut(s)	433
BseRI	GAGGAG	3 cut(s)	182, 614, 789
BseSI	GKGCMC	1 cut(s)	944
BseXI	GCAGC	2 cut(s)	352, 886
Bsh1236I	CGCG	1 cut(s)	435
BshFI	GGCC	6 cut(s)	256, 381, 457, 673, 858, 1080
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	1 cut(s)	1173
BsiSI	CCGG	5 cut(s)	74, 339, 1061, 1077, 1165
BslI	CCNNNNNNNGG	5 cut(s)	263, 327, 565, 848, 961
BsmAI	GTCTC	4 cut(s)	202, 351, 358, 967
BsmI	GAATGC	1 cut(s)	923
BsnI	GGCC	6 cut(s)	256, 381, 457, 673, 858, 1080
Bso31I	GGTCTC	2 cut(s)	202, 967
Bsp119I	TTCGAA	1 cut(s)	464
Bsp1286I	GDGCHC	3 cut(s)	270, 944, 1173
Bsp143I	GATC	2 cut(s)	1123, 1155
BspACI	CCGC	3 cut(s)	257, 735, 863
BspANI	GGCC	6 cut(s)	256, 381, 457, 673, 858, 1080
BspCNI	CTCAG	5 cut(s)	306, 368, 409, 608, 969
BspFNI	CGCG	1 cut(s)	435
BspHI	TCATGA	2 cut(s)	892, 1084
BspLI	GGNNCC	4 cut(s)	6, 72, 529, 1059
BspMI	ACCTGC	1 cut(s)	134
BspPI	GGATC	1 cut(s)	1118
BspQI	GCTCTTC	1 cut(s)	423
BspT104I	TTCGAA	1 cut(s)	464
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	2 cut(s)	202, 967
BsrDI	GCAATG	1 cut(s)	859
BsrI	ACTGG	3 cut(s)	382, 670, 1134
BssECI	CCNNGG	4 cut(s)	90, 339, 674, 827
BssHII	GCGCGC	1 cut(s)	433
BssMI	GATC	2 cut(s)	1123, 1155
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	827
Bst2UI	CCWGG	2 cut(s)	245, 675
Bst4CI	ACNGT	5 cut(s)	391, 568, 699, 1043, 1107
Bst6I	CTCTTC	2 cut(s)	423, 471
BstACI	GRCGYC	1 cut(s)	5
BstBI	TTCGAA	1 cut(s)	464
BstC8I	GCNNGC	5 cut(s)	435, 614, 811, 912, 1178
BstDEI	CTNAG	6 cut(s)	293, 355, 396, 595, 796, 956
BstDSI	CCRYGG	1 cut(s)	90
BstENI	CCTNNNNNAGG	2 cut(s)	846, 959
BstF5I	GGATG	3 cut(s)	335, 500, 1069
BstFNI	CGCG	1 cut(s)	435
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 435, 437
BstKTI	GATC	2 cut(s)	1126, 1158
BstMAI	GTCTC	4 cut(s)	202, 351, 358, 967
BstMBI	GATC	2 cut(s)	1123, 1155
BstMWI	GCNNNNNNNGC	5 cut(s)	265, 439, 829, 920, 1177
BstNI	CCWGG	2 cut(s)	245, 675
BstNSI	RCATGY	1 cut(s)	616
BstSCI	CCNGG	5 cut(s)	243, 338, 673, 1059, 1164
BstSFI	CTRYAG	1 cut(s)	607
BstSLI	GKGCMC	1 cut(s)	944
BstUI	CGCG	1 cut(s)	435
BstV1I	GCAGC	2 cut(s)	352, 886
BstV2I	GAAGAC	1 cut(s)	246
BsuI	GTATCC	1 cut(s)	166
BsuRI	GGCC	6 cut(s)	256, 381, 457, 673, 858, 1080
BtgI	CCRYGG	1 cut(s)	90
BtsCI	GGATG	3 cut(s)	335, 500, 1069
BtsIMutI	CAGTG	5 cut(s)	301, 363, 1048, 1112, 1127
BveI	ACCTGC	1 cut(s)	134
Cac8I	GCNNGC	5 cut(s)	435, 614, 811, 912, 1178
CciI	TCATGA	2 cut(s)	892, 1084
CfoI	GCGC	3 cut(s)	7, 435, 437
Cfr13I	GGNCC	1 cut(s)	1057
CsiI	ACCWGGT	1 cut(s)	243
Csp6I	GTAC	2 cut(s)	540, 793
CspCI	CAANNNNNGTGG	2 cut(s)	72, 107
CviAII	CATG	6 cut(s)	322, 613, 638, 682, 893, 1085
CviQI	GTAC	2 cut(s)	540, 793
DdeI	CTNAG	6 cut(s)	293, 355, 396, 595, 796, 956
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	2 cut(s)	1125, 1157
DpnII	GATC	2 cut(s)	1123, 1155
DriI	GACNNNNNGTC	1 cut(s)	247
EaeI	YGGCCR	2 cut(s)	379, 1078
Eam1104I	CTCTTC	2 cut(s)	423, 471
Eam1105I	GACNNNNNGTC	1 cut(s)	247
EarI	CTCTTC	2 cut(s)	423, 471
EciI	GGCGGA	2 cut(s)	750, 852
Eco130I	CCWWGG	1 cut(s)	827
Eco24I	GRGCYC	1 cut(s)	270
Eco31I	GGTCTC	2 cut(s)	202, 967
Eco47I	GGWCC	1 cut(s)	1057
Eco57I	CTGAAG	1 cut(s)	135
EcoNI	CCTNNNNNAGG	2 cut(s)	846, 959
EcoRI	GAATTC	1 cut(s)	127
EcoRII	CCWGG	2 cut(s)	243, 673
EcoT14I	CCWWGG	1 cut(s)	827
EcoT38I	GRGCYC	1 cut(s)	270
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	827
FaeI	CATG	6 cut(s)	325, 616, 641, 685, 896, 1088
FalI	AAGNNNNNCTT	4 cut(s)	173, 205, 273, 305
FatI	CATG	6 cut(s)	321, 612, 637, 681, 892, 1084
FbaI	TGATCA	1 cut(s)	1155
Fnu4HI	GCNGC	3 cut(s)	257, 366, 900
FokI	GGATG	3 cut(s)	322, 487, 1076
FriOI	GRGCYC	1 cut(s)	270
Fsp4HI	GCNGC	3 cut(s)	257, 366, 900
FspBI	CTAG	1 cut(s)	693
GlaI	GCGC	3 cut(s)	6, 434, 436
GluI	GCNGC	3 cut(s)	257, 366, 900
GsuI	CTGGAG	1 cut(s)	792
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	6 cut(s)	256, 381, 457, 673, 858, 1080
HapII	CCGG	5 cut(s)	74, 339, 1061, 1077, 1165
HhaI	GCGC	3 cut(s)	7, 435, 437
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	6 cut(s)	325, 616, 641, 685, 896, 1088
Hin6I	GCGC	3 cut(s)	5, 433, 435
HinP1I	GCGC	3 cut(s)	5, 433, 435
HincII	GTYRAC	1 cut(s)	634
HindII	GTYRAC	1 cut(s)	634
HinfI	GANTC	7 cut(s)	95, 344, 411, 461, 593, 951, 1088
HpaII	CCGG	5 cut(s)	74, 339, 1061, 1077, 1165
HphI	GGTGA	1 cut(s)	412
Hpy166II	GTNNAC	4 cut(s)	227, 387, 634, 989
Hpy188I	TCNGA	5 cut(s)	12, 100, 490, 580, 598
Hpy188III	TCNNGA	7 cut(s)	199, 653, 693, 771, 893, 1085, 1092
Hpy8I	GTNNAC	4 cut(s)	227, 387, 634, 989
HpyAV	CCTTC	9 cut(s)	167, 275, 279, 321, 725, 842, 869, 876, 931
HpyCH4III	ACNGT	5 cut(s)	391, 568, 699, 1043, 1107
HpyCH4IV	ACGT	1 cut(s)	985
HpyCH4V	TGCA	5 cut(s)	314, 368, 622, 902, 931
HpyF10VI	GCNNNNNNNGC	5 cut(s)	265, 439, 829, 920, 1177
HpyF3I	CTNAG	6 cut(s)	293, 355, 396, 595, 796, 956
HpySE526I	ACGT	1 cut(s)	985
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	6 cut(s)	325, 616, 641, 685, 896, 1088
HspAI	GCGC	3 cut(s)	5, 433, 435
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	1155
Kzo9I	GATC	2 cut(s)	1123, 1155
LguI	GCTCTTC	1 cut(s)	423
LmnI	GCTCC	2 cut(s)	527, 1168
Lsp1109I	GCAGC	2 cut(s)	352, 886
LweI	GCATC	2 cut(s)	344, 509
MabI	ACCWGGT	1 cut(s)	243
MaeI	CTAG	1 cut(s)	693
MaeII	ACGT	1 cut(s)	985
MaeIII	GTNAC	3 cut(s)	400, 590, 661
MalI	GATC	2 cut(s)	1125, 1157
MboI	GATC	2 cut(s)	1123, 1155
MboII	GAAGA	6 cut(s)	25, 123, 141, 251, 440, 488
MfeI	CAATTG	1 cut(s)	315
MhlI	GDGCHC	3 cut(s)	270, 944, 1173
MluCI	AATT	6 cut(s)	44, 127, 315, 491, 517, 627
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	353, 587
MseI	TTAA	3 cut(s)	180, 483, 882
MslI	CAYNNNNRTG	2 cut(s)	551, 1195
MspI	CCGG	5 cut(s)	74, 339, 1061, 1077, 1165
MspR9I	CCNGG	5 cut(s)	245, 340, 675, 1061, 1166
MunI	CAATTG	1 cut(s)	315
Mva1269I	GAATGC	1 cut(s)	923
MvaI	CCWGG	2 cut(s)	245, 675
MvnI	CGCG	1 cut(s)	435
MwoI	GCNNNNNNNGC	5 cut(s)	265, 439, 829, 920, 1177
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	3 cut(s)	340, 1061, 1166
NdeII	GATC	2 cut(s)	1123, 1155
NlaIII	CATG	6 cut(s)	325, 616, 641, 685, 896, 1088
NlaIV	GGNNCC	4 cut(s)	6, 72, 529, 1059
NmuCI	GTSAC	3 cut(s)	400, 590, 661
NspI	RCATGY	1 cut(s)	616
NspV	TTCGAA	1 cut(s)	464
OliI	CACNNNNGTG	1 cut(s)	1195
PaeI	GCATGC	1 cut(s)	616
PagI	TCATGA	2 cut(s)	892, 1084
PauI	GCGCGC	1 cut(s)	433
PciSI	GCTCTTC	1 cut(s)	423
PctI	GAATGC	1 cut(s)	923
PfeI	GAWTC	5 cut(s)	95, 411, 461, 951, 1088
PkrI	GCNGC	3 cut(s)	258, 367, 901
PleI	GAGTC	2 cut(s)	352, 587
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	352, 587
Psp6I	CCWGG	2 cut(s)	243, 673
PspGI	CCWGG	2 cut(s)	243, 673
PspN4I	GGNNCC	4 cut(s)	6, 72, 529, 1059
PspPI	GGNCC	1 cut(s)	1057
PteI	GCGCGC	1 cut(s)	433
RsaI	GTAC	2 cut(s)	541, 794
RsaNI	GTAC	2 cut(s)	540, 793
RseI	CAYNNNNRTG	2 cut(s)	551, 1195
SapI	GCTCTTC	1 cut(s)	423
SaqAI	TTAA	3 cut(s)	180, 483, 882
SatI	GCNGC	3 cut(s)	257, 366, 900
Sau3AI	GATC	2 cut(s)	1123, 1155
Sau96I	GGNCC	1 cut(s)	1057
ScaI	AGTACT	1 cut(s)	794
SchI	GAGTC	2 cut(s)	353, 587
ScrFI	CCNGG	5 cut(s)	245, 340, 675, 1061, 1166
SduI	GDGCHC	3 cut(s)	270, 944, 1173
SexAI	ACCWGGT	1 cut(s)	243
SfaNI	GCATC	2 cut(s)	344, 509
SfcI	CTRYAG	1 cut(s)	607
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	1 cut(s)	464
SinI	GGWCC	1 cut(s)	1057
SmiMI	CAYNNNNRTG	2 cut(s)	551, 1195
SmlI	CTYRAG	2 cut(s)	348, 449
SmoI	CTYRAG	2 cut(s)	348, 449
SphI	GCATGC	1 cut(s)	616
Sse9I	AATT	6 cut(s)	44, 127, 315, 491, 517, 627
SsiI	CCGC	3 cut(s)	257, 735, 863
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	1 cut(s)	693
StyD4I	CCNGG	5 cut(s)	243, 338, 673, 1059, 1164
StyI	CCWWGG	1 cut(s)	827
TaaI	ACNGT	5 cut(s)	391, 568, 699, 1043, 1107
TaiI	ACGT	1 cut(s)	988
TaqI	TCGA	5 cut(s)	200, 213, 251, 464, 1038
TasI	AATT	6 cut(s)	44, 127, 315, 491, 517, 627
TatI	WGTACW	1 cut(s)	792
TauI	GCSGC	1 cut(s)	259
TfiI	GAWTC	5 cut(s)	95, 411, 461, 951, 1088
Tru1I	TTAA	3 cut(s)	180, 483, 882
Tru9I	TTAA	3 cut(s)	180, 483, 882
TscAI	CASTG	5 cut(s)	301, 363, 1048, 1112, 1134
TseFI	GTSAC	3 cut(s)	400, 590, 661
TseI	GCWGC	2 cut(s)	365, 899
Tsp45I	GTSAC	3 cut(s)	400, 590, 661
TspDTI	ATGAA	2 cut(s)	403, 881
TspGWI	ACGGA	1 cut(s)	859
TspRI	CASTG	5 cut(s)	301, 363, 1048, 1112, 1134
VpaK11BI	GGWCC	1 cut(s)	1057
XagI	CCTNNNNNAGG	2 cut(s)	846, 959
XapI	RAATTY	2 cut(s)	127, 491
XbaI	TCTAGA	1 cut(s)	692
XceI	RCATGY	1 cut(s)	616
XcmI	CCANNNNNNNNNTGG	1 cut(s)	328
XspI	CTAG	1 cut(s)	693
ZrmI	AGTACT	1 cut(s)	794

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.