Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0011704

Physical Location & Seq

Genomic Coordinates Forward (+)

56251505 .. 56253837

Gene Structure 2333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG329000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGAGTAGTGTTCGCTTTTCAGAACCTATTGGGCCCGTAACCATGGGGGTTATGCAGGTGAGACTTGTTGGTTCAACATCTATTGGGCCAAGTTTATTGCTCCAAGTAGTGTCAACCTTCTCCAAGTTTATTTCATTTTCCATCATTCTCTTCCCAAACCAAAACATTTCTGACACAACTCTCCAGCTTCACCTTTCCCTGGCTGTTAAGAATCTCACTTCCCTTCAAGTTCAAAGCCAATCAGAAGTTGTGGGCTTTCCTGAACTGAGCTTGATGGCGCCTCCCAAGAAATCAAAGAAAAATAAGAAAGATGGCAAATTGAAGAAATGCAAAAGCTCAAGTGTGGCTCCAGTCGAGCCTACAGCTCCTGACTCTGAGTGGTGGGATAGTTTCTGGCACAAGAATGCTTCAAACCCAGGCTCTTCACTATCGAAAGATGAGGAAGAAGGATTTAAGTATTTCTTTAGGGTCTCTAGAAAGACTTTTGATTACATCTGTTCTATTGTAAGAGAAGACCTTGTGTCGAGGCCACCATCAGGGCTCATCAACATTGAAGGGAGGCTTCTTAGTGTTGAGAAACAGGTTGCAATTGCCATGAGAAGGTTGGCATCTGGTGAGTCTCAGGTCTCAGTGGGAGCCGCCTTTGGGGTCGGCCAGTCCACAGTTTCTCAGGTGACTTGGAGATTCATTGAAGCATTGGAAGAACGTGCCAAGCACCATCTCAAGTGGCCTGATTCCAATAGGATGGAGGAAATTAAGTCTAAACTTGAAGCATCTTTTGGATTGCCCAATTGCTGTGGAGCCATAGATGGCACACACATCATAATGACACTTCCTACTGTTCAAGCATCGGACGATTGGTGTGACCCAGAGAAAAATTACAGCATGCTCTTGCAGGGAACTGTCGACCATGAGTTAAGATTTCTTGATATTGTGACTGGTTGGCCTGGGGGAATGACAGTGTCTAGACTATTAAAGTGTTCGGGACTTTTCAAGCTTTGTGAAAGTGGACAGCGTTTAAATGGGAGTGTTCGAACTTTATCTGAAGGAGGAGAGATCAGAGAATATGTGGTTGGTGGGGTTGGTTATCCTCTCCTTCCCTGGCTCATAACTCCTTATGAAAGCAGTGGCCTTCCGGCTTCTGTTGTTTCTGCTTTTAATGCCACGCATGAGGCTGCAAGGTCTCTTGCAGTAAGGGCATTCTCGCAGTTAAAGGGCACTTGGAGAATCCTCAGCAAGGTTATGTGGAGACCAGATAAACGGAAACTTCCAAGCATTATCTTGGTATGTTGTTTACTCCACAATATAATAATCGACTGTGGAGATATATTAAACCCAGATGTTGCTTTATCTGGTCATCACGACTCGGGATATGGAGAGCAATGCTGTAAGCAAGTTGATCCATTGGGAAGGTCTATGAGGGAGAACTTAGTTAGACACTGGCAGCATAGCAAGCAAACAGCTGCATCAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010639 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031519 GO:0031935 GO:0031936 GO:0031974 GO:0031981 GO:0032991 GO:0033043 GO:0033044 GO:0034708 GO:0035097 GO:0035098 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045815 GO:0045893 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0080090 GO:1902275 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1990234 GO:2000112 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDE_Tnp_4

Protein Analysis

491

Amino Acids

54.21

Weight (kDa)

8.81

Isoelectric Point (pI)

44.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Plant_tran	PF04827	248 - 439	3.1e-07	Plant transposon protein
DDE_Tnp_4	PF13359	269 - 435	5.9e-18	DDE superfamily endonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011704)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63270
fragaria_vesca	FvH4_2g23101
malus_domestica	MD03G1260000.v1.1 MD11G1280300.v1.1
prunus_persica	Prupe.3G034000_v2.0.a1 Prupe.8G236200_v2.0.a1
pyrus_communis	pycom03g20770
rosa_chinensis	RchiOBHm_Chr6g0290271
rosa_laevigata	RLG00000012229
rosa_multiflora	Rmu_sc0034661.1_g000001 Rmu_ssc0000208.1_g000001
rosa_roxburghii	Rroxscaffold_7G00177190
rosa_rugosa	Rorug06G0211400
rosa_samantha	Rh6AG321700 Rh6BG329000 Rh6CG334900 Rh6DG322000
rosa_wichuraiana	Rw6G027790 Rw6G027890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	46
Acc36I	ACCTGC	1 cut(s)	46
AccB1I	GGYRCC	1 cut(s)	277
AccI	GTMKAC	1 cut(s)	906
AciI	CCGC	1 cut(s)	639
AclWI	GGATC	1 cut(s)	1394
AcoI	YGGCCR	1 cut(s)	652
AcuI	CTGAAG	1 cut(s)	1065
AcyI	GRCGYC	1 cut(s)	278
AfiI	CCNNNNNNNGG	5 cut(s)	199, 536, 600, 645, 1237
AhdI	GACNNNNNGTC	1 cut(s)	520
AjnI	CCWGG	4 cut(s)	198, 415, 946, 1100
AjuI	GAANNNNNNNTTGG	4 cut(s)	762, 794, 1056, 1088
AluBI	AGCT	6 cut(s)	187, 270, 336, 365, 997, 1463
AluI	AGCT	6 cut(s)	187, 270, 336, 365, 997, 1463
Alw26I	GTCTC	6 cut(s)	55, 475, 624, 631, 1188, 1243
AlwI	GGATC	1 cut(s)	1394
AlwNI	CAGNNNCTG	1 cut(s)	368
Ama87I	CYCGRG	1 cut(s)	1366
AoxI	GGCC	7 cut(s)	32, 86, 527, 652, 728, 944, 1129
ApaI	GGGCCC	1 cut(s)	36
ApeKI	GCWGC	3 cut(s)	1175, 1444, 1463
AspLEI	GCGC	1 cut(s)	280
AspS9I	GGNCC	3 cut(s)	32, 33, 86
AsuHPI	GGTGA	4 cut(s)	70, 182, 626, 685
AsuII	TTCGAA	1 cut(s)	1033
AvaI	CYCGRG	1 cut(s)	1366
BaeGI	GKGCMC	2 cut(s)	36, 1220
BanI	GGYRCC	1 cut(s)	277
BanII	GRGCYC	2 cut(s)	36, 543
BbsI	GAAGAC	1 cut(s)	519
BbvCI	CCTCAGC	1 cut(s)	1232
BbvI	GCAGC	3 cut(s)	1162, 1450, 1456
BccI	CCATC	7 cut(s)	149, 268, 305, 541, 726, 739, 803
BciT130I	CCWGG	4 cut(s)	200, 417, 948, 1102
BcoDI	GTCTC	6 cut(s)	55, 475, 624, 631, 1188, 1243
BfaI	CTAG	2 cut(s)	474, 966
BfmI	CTRYAG	1 cut(s)	360
BfoI	RGCGCY	1 cut(s)	281
BfuAI	ACCTGC	1 cut(s)	46
BisI	GCNGC	4 cut(s)	639, 1176, 1445, 1464
BlsI	GCNGC	4 cut(s)	640, 1177, 1446, 1465
Bme1390I	CCNGG	4 cut(s)	200, 417, 948, 1102
BmeRI	GACNNNNNGTC	1 cut(s)	520
BmeT110I	CYCGRG	1 cut(s)	1366
BmgT120I	GGNCC	3 cut(s)	32, 33, 86
BmiI	GGNNCC	5 cut(s)	34, 279, 348, 637, 802
BmrFI	CCNGG	4 cut(s)	200, 417, 948, 1102
BmsI	GCATC	3 cut(s)	617, 782, 857
BpiI	GAAGAC	1 cut(s)	519
BpmI	CTGGAG	2 cut(s)	167, 333
Bpu10I	CCTNAGC	1 cut(s)	1232
Bpu14I	TTCGAA	1 cut(s)	1033
BpuEI	CTTGAG	2 cut(s)	322, 707
BsaHI	GRCGYC	1 cut(s)	278
BsaI	GGTCTC	4 cut(s)	475, 631, 1188, 1243
BsaJI	CCNNGG	5 cut(s)	42, 198, 415, 947, 1100
Bsc4I	CCNNNNNNNGG	5 cut(s)	199, 536, 600, 645, 1237
Bse1I	ACTGG	4 cut(s)	350, 655, 943, 1445
Bse3DI	GCAATG	1 cut(s)	1388
BseBI	CCWGG	4 cut(s)	200, 417, 948, 1102
BseDI	CCNNGG	5 cut(s)	42, 198, 415, 947, 1100
BseGI	GGATG	1 cut(s)	750
BseLI	CCNNNNNNNGG	5 cut(s)	199, 536, 600, 645, 1237
BseMI	GCAATG	1 cut(s)	1388
BseMII	CTCAG	6 cut(s)	257, 366, 635, 642, 683, 1246
BseNI	ACTGG	4 cut(s)	350, 655, 943, 1445
BseRI	GAGGAG	1 cut(s)	1065
BseSI	GKGCMC	2 cut(s)	36, 1220
BseXI	GCAGC	3 cut(s)	1162, 1450, 1456
BshFI	GGCC	7 cut(s)	34, 88, 529, 654, 730, 946, 1131
BshNI	GGYRCC	1 cut(s)	277
BsiHKCI	CYCGRG	1 cut(s)	1366
BsiSI	CCGG	1 cut(s)	1136
BslFI	GGGAC	1 cut(s)	999
BslI	CCNNNNNNNGG	5 cut(s)	199, 536, 600, 645, 1237
BsmAI	GTCTC	6 cut(s)	55, 475, 624, 631, 1188, 1243
BsmFI	GGGAC	1 cut(s)	999
BsmI	GAATGC	2 cut(s)	409, 1199
BsnI	GGCC	7 cut(s)	34, 88, 529, 654, 730, 946, 1131
Bso31I	GGTCTC	4 cut(s)	475, 631, 1188, 1243
BsoBI	CYCGRG	1 cut(s)	1366
Bsp119I	TTCGAA	1 cut(s)	1033
Bsp120I	GGGCCC	1 cut(s)	32
Bsp1286I	GDGCHC	3 cut(s)	36, 543, 1220
Bsp143I	GATC	2 cut(s)	1056, 1399
Bsp19I	CCATGG	1 cut(s)	42
BspACI	CCGC	1 cut(s)	639
BspANI	GGCC	7 cut(s)	34, 88, 529, 654, 730, 946, 1131
BspCNI	CTCAG	6 cut(s)	258, 367, 634, 641, 682, 1245
BspLI	GGNNCC	5 cut(s)	34, 279, 348, 637, 802
BspMI	ACCTGC	1 cut(s)	46
BspPI	GGATC	1 cut(s)	1394
BspQI	GCTCTTC	1 cut(s)	427
BspT104I	TTCGAA	1 cut(s)	1033
BspT107I	GGYRCC	1 cut(s)	277
BspTNI	GGTCTC	4 cut(s)	475, 631, 1188, 1243
BsrDI	GCAATG	1 cut(s)	1388
BsrI	ACTGG	4 cut(s)	350, 655, 943, 1445
BssECI	CCNNGG	5 cut(s)	42, 198, 415, 947, 1100
BssMI	GATC	2 cut(s)	1056, 1399
BssNI	GRCGYC	1 cut(s)	278
BssT1I	CCWWGG	1 cut(s)	42
Bst2UI	CCWGG	4 cut(s)	200, 417, 948, 1102
Bst4CI	ACNGT	5 cut(s)	664, 841, 904, 961, 1319
Bst6I	CTCTTC	2 cut(s)	155, 427
BstACI	GRCGYC	1 cut(s)	278
BstBI	TTCGAA	1 cut(s)	1033
BstC8I	GCNNGC	2 cut(s)	887, 1454
BstDEI	CTNAG	8 cut(s)	266, 375, 566, 621, 628, 669, 1232, 1429
BstDSI	CCRYGG	1 cut(s)	42
BstENI	CCTNNNNNAGG	1 cut(s)	1235
BstF5I	GGATG	1 cut(s)	750
BstH2I	RGCGCY	1 cut(s)	281
BstHHI	GCGC	1 cut(s)	280
BstKTI	GATC	2 cut(s)	1059, 1402
BstMAI	GTCTC	6 cut(s)	55, 475, 624, 631, 1188, 1243
BstMBI	GATC	2 cut(s)	1056, 1399
BstMWI	GCNNNNNNNGC	3 cut(s)	1160, 1196, 1453
BstNI	CCWGG	4 cut(s)	200, 417, 948, 1102
BstNSI	RCATGY	1 cut(s)	889
BstSCI	CCNGG	4 cut(s)	198, 415, 946, 1100
BstSFI	CTRYAG	1 cut(s)	360
BstSLI	GKGCMC	2 cut(s)	36, 1220
BstV1I	GCAGC	3 cut(s)	1162, 1450, 1456
BstV2I	GAAGAC	1 cut(s)	519
BstXI	CCANNNNNNTGG	1 cut(s)	745
BsuRI	GGCC	7 cut(s)	34, 88, 529, 654, 730, 946, 1131
BtgI	CCRYGG	1 cut(s)	42
BtsCI	GGATG	1 cut(s)	750
BtsI	GCAGTG	1 cut(s)	1132
BtsIMutI	CAGTG	4 cut(s)	636, 966, 1132, 1438
BveI	ACCTGC	1 cut(s)	46
Cac8I	GCNNGC	2 cut(s)	887, 1454
CaiI	CAGNNNCTG	1 cut(s)	368
CfoI	GCGC	1 cut(s)	280
Cfr13I	GGNCC	3 cut(s)	32, 33, 86
CspCI	CAANNNNNGTGG	2 cut(s)	778, 813
CviAII	CATG	5 cut(s)	43, 595, 886, 911, 1169
DdeI	CTNAG	8 cut(s)	266, 375, 566, 621, 628, 669, 1232, 1429
DinI	GGCGCC	1 cut(s)	279
DpnI	GATC	2 cut(s)	1058, 1401
DpnII	GATC	2 cut(s)	1056, 1399
DraI	TTTAAA	1 cut(s)	1020
DriI	GACNNNNNGTC	1 cut(s)	520
EaeI	YGGCCR	1 cut(s)	652
Eam1104I	CTCTTC	2 cut(s)	155, 427
Eam1105I	GACNNNNNGTC	1 cut(s)	520
EarI	CTCTTC	2 cut(s)	155, 427
Eco130I	CCWWGG	1 cut(s)	42
Eco24I	GRGCYC	2 cut(s)	36, 543
Eco31I	GGTCTC	4 cut(s)	475, 631, 1188, 1243
Eco57I	CTGAAG	1 cut(s)	1065
Eco88I	CYCGRG	1 cut(s)	1366
EcoNI	CCTNNNNNAGG	1 cut(s)	1235
EcoRII	CCWGG	4 cut(s)	198, 415, 946, 1100
EcoT14I	CCWWGG	1 cut(s)	42
EcoT38I	GRGCYC	2 cut(s)	36, 543
EgeI	GGCGCC	1 cut(s)	279
EheI	GGCGCC	1 cut(s)	279
ErhI	CCWWGG	1 cut(s)	42
FaeI	CATG	5 cut(s)	46, 598, 889, 914, 1172
FalI	AAGNNNNNCTT	4 cut(s)	446, 478, 546, 578
FaqI	GGGAC	1 cut(s)	999
FatI	CATG	5 cut(s)	42, 594, 885, 910, 1168
FblI	GTMKAC	1 cut(s)	906
Fnu4HI	GCNGC	4 cut(s)	639, 1176, 1445, 1464
FokI	GGATG	1 cut(s)	757
FriOI	GRGCYC	2 cut(s)	36, 543
Fsp4HI	GCNGC	4 cut(s)	639, 1176, 1445, 1464
FspBI	CTAG	2 cut(s)	474, 966
GlaI	GCGC	1 cut(s)	279
GluI	GCNGC	4 cut(s)	639, 1176, 1445, 1464
GsuI	CTGGAG	2 cut(s)	167, 333
HaeII	RGCGCY	1 cut(s)	281
HaeIII	GGCC	7 cut(s)	34, 88, 529, 654, 730, 946, 1131
HapII	CCGG	1 cut(s)	1136
HhaI	GCGC	1 cut(s)	280
Hin1I	GRCGYC	1 cut(s)	278
Hin1II	CATG	5 cut(s)	46, 598, 889, 914, 1172
Hin6I	GCGC	1 cut(s)	278
HinP1I	GCGC	1 cut(s)	278
HincII	GTYRAC	2 cut(s)	114, 907
HindII	GTYRAC	2 cut(s)	114, 907
HindIII	AAGCTT	1 cut(s)	995
HinfI	GANTC	7 cut(s)	211, 371, 617, 684, 734, 1227, 1364
HpaII	CCGG	1 cut(s)	1136
HphI	GGTGA	4 cut(s)	70, 182, 626, 685
Hpy166II	GTNNAC	5 cut(s)	114, 660, 907, 1010, 1295
Hpy188I	TCNGA	7 cut(s)	22, 172, 244, 376, 853, 1045, 1061
Hpy188III	TCNNGA	8 cut(s)	260, 368, 474, 926, 966, 984, 1361, 1368
Hpy8I	GTNNAC	5 cut(s)	114, 660, 907, 1010, 1295
HpyAV	CCTTC	9 cut(s)	127, 233, 440, 548, 594, 1040, 1106, 1142, 1404
HpyCH4III	ACNGT	5 cut(s)	664, 841, 904, 961, 1319
HpyCH4IV	ACGT	1 cut(s)	706
HpyCH4V	TGCA	7 cut(s)	55, 330, 587, 895, 1178, 1190, 1466
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1160, 1196, 1453
HpyF3I	CTNAG	8 cut(s)	266, 375, 566, 621, 628, 669, 1232, 1429
HpySE526I	ACGT	1 cut(s)	706
Hsp92I	GRCGYC	1 cut(s)	278
Hsp92II	CATG	5 cut(s)	46, 598, 889, 914, 1172
HspAI	GCGC	1 cut(s)	278
KasI	GGCGCC	1 cut(s)	277
Kzo9I	GATC	2 cut(s)	1056, 1399
LguI	GCTCTTC	1 cut(s)	427
LmnI	GCTCC	5 cut(s)	105, 352, 370, 635, 800
Lsp1109I	GCAGC	3 cut(s)	1162, 1450, 1456
LweI	GCATC	3 cut(s)	617, 782, 857
MaeI	CTAG	2 cut(s)	474, 966
MaeII	ACGT	1 cut(s)	706
MaeIII	GTNAC	4 cut(s)	37, 673, 863, 934
MalI	GATC	2 cut(s)	1058, 1401
MboI	GATC	2 cut(s)	1056, 1399
MboII	GAAGA	6 cut(s)	142, 334, 414, 455, 524, 713
MfeI	CAATTG	2 cut(s)	588, 790
MhlI	GDGCHC	3 cut(s)	36, 543, 1220
MluCI	AATT	5 cut(s)	317, 588, 753, 790, 877
Mly113I	GGCGCC	1 cut(s)	278
MlyI	GAGTC	3 cut(s)	365, 626, 1358
MseI	TTAA	9 cut(s)	207, 453, 756, 917, 974, 1019, 1158, 1211, 1331
MslI	CAYNNNNRTG	3 cut(s)	402, 824, 1471
MspA1I	CMGCKG	1 cut(s)	1463
MspI	CCGG	1 cut(s)	1136
MspR9I	CCNGG	4 cut(s)	200, 417, 948, 1102
MunI	CAATTG	2 cut(s)	588, 790
Mva1269I	GAATGC	2 cut(s)	409, 1199
MvaI	CCWGG	4 cut(s)	200, 417, 948, 1102
MwoI	GCNNNNNNNGC	3 cut(s)	1160, 1196, 1453
NarI	GGCGCC	1 cut(s)	278
NcoI	CCATGG	1 cut(s)	42
NdeII	GATC	2 cut(s)	1056, 1399
NlaIII	CATG	5 cut(s)	46, 598, 889, 914, 1172
NlaIV	GGNNCC	5 cut(s)	34, 279, 348, 637, 802
NmuCI	GTSAC	3 cut(s)	673, 863, 934
NspI	RCATGY	1 cut(s)	889
NspV	TTCGAA	1 cut(s)	1033
PaeI	GCATGC	1 cut(s)	889
PaqCI	CACCTGC	1 cut(s)	46
PciSI	GCTCTTC	1 cut(s)	427
PctI	GAATGC	2 cut(s)	409, 1199
PfeI	GAWTC	4 cut(s)	211, 684, 734, 1227
PflFI	GACNNNGTC	1 cut(s)	961
PkrI	GCNGC	4 cut(s)	640, 1177, 1446, 1465
PleI	GAGTC	3 cut(s)	365, 625, 1358
PluTI	GGCGCC	1 cut(s)	281
PpsI	GAGTC	3 cut(s)	365, 625, 1358
Psp6I	CCWGG	4 cut(s)	198, 415, 946, 1100
PspGI	CCWGG	4 cut(s)	198, 415, 946, 1100
PspN4I	GGNNCC	5 cut(s)	34, 279, 348, 637, 802
PspOMI	GGGCCC	1 cut(s)	32
PspPI	GGNCC	3 cut(s)	32, 33, 86
PstNI	CAGNNNCTG	1 cut(s)	368
PsyI	GACNNNGTC	1 cut(s)	961
PvuII	CAGCTG	1 cut(s)	1463
RseI	CAYNNNNRTG	3 cut(s)	402, 824, 1471
SalI	GTCGAC	1 cut(s)	905
SapI	GCTCTTC	1 cut(s)	427
SaqAI	TTAA	9 cut(s)	207, 453, 756, 917, 974, 1019, 1158, 1211, 1331
SatI	GCNGC	4 cut(s)	639, 1176, 1445, 1464
Sau3AI	GATC	2 cut(s)	1056, 1399
Sau96I	GGNCC	3 cut(s)	32, 33, 86
SchI	GAGTC	3 cut(s)	365, 626, 1358
ScrFI	CCNGG	4 cut(s)	200, 417, 948, 1102
SduI	GDGCHC	3 cut(s)	36, 543, 1220
SfaNI	GCATC	3 cut(s)	617, 782, 857
SfcI	CTRYAG	1 cut(s)	360
SfoI	GGCGCC	1 cut(s)	279
SfuI	TTCGAA	1 cut(s)	1033
SmiMI	CAYNNNNRTG	3 cut(s)	402, 824, 1471
SmlI	CTYRAG	2 cut(s)	337, 722
SmoI	CTYRAG	2 cut(s)	337, 722
SphI	GCATGC	1 cut(s)	889
Sse9I	AATT	5 cut(s)	317, 588, 753, 790, 877
SsiI	CCGC	1 cut(s)	639
SspDI	GGCGCC	1 cut(s)	277
SspMI	CTAG	2 cut(s)	474, 966
StyD4I	CCNGG	4 cut(s)	198, 415, 946, 1100
StyI	CCWWGG	1 cut(s)	42
TaaI	ACNGT	5 cut(s)	664, 841, 904, 961, 1319
TaiI	ACGT	1 cut(s)	709
TaqI	TCGA	6 cut(s)	354, 431, 524, 906, 1033, 1314
TasI	AATT	5 cut(s)	317, 588, 753, 790, 877
TauI	GCSGC	1 cut(s)	641
TfiI	GAWTC	4 cut(s)	211, 684, 734, 1227
Tru1I	TTAA	9 cut(s)	207, 453, 756, 917, 974, 1019, 1158, 1211, 1331
Tru9I	TTAA	9 cut(s)	207, 453, 756, 917, 974, 1019, 1158, 1211, 1331
TscAI	CASTG	4 cut(s)	636, 966, 1132, 1445
TseFI	GTSAC	3 cut(s)	673, 863, 934
TseI	GCWGC	3 cut(s)	1175, 1444, 1463
Tsp45I	GTSAC	3 cut(s)	673, 863, 934
TspDTI	ATGAA	3 cut(s)	123, 676, 1134
TspGWI	ACGGA	1 cut(s)	1276
TspRI	CASTG	4 cut(s)	636, 966, 1132, 1445
Tth111I	GACNNNGTC	1 cut(s)	961
XagI	CCTNNNNNAGG	1 cut(s)	1235
XbaI	TCTAGA	2 cut(s)	473, 965
XceI	RCATGY	1 cut(s)	889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	601
XmiI	GTMKAC	1 cut(s)	906
XspI	CTAG	2 cut(s)	474, 966

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.