Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011704

Physical Location & Seq

Genomic Coordinates Forward (+)

53373560 .. 53376997

Gene Structure 3438 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26042

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGTACCAATCTCTCTCCACTACTGCTAAATCAAAAAGAGTGAAAGATATACACATAATTGTATACACTCGATCGGTCATAGAAAATAATAATCACCACATAGGCAATGAGTACTGTTCGCTTTTCAGAACCTATTGGGCCTGTAACCATGGGGGTTATGCAGGTGAGATTTGCTGGTGCAACATCTATTGGGCCAAGTTTATTGCTCCAAGTAGTGTCAAGTGTCAACCTTCTCCAAGTTTATTTAATTGTCCATCACTCTCCTTCATTCTCTTCCCAAACCAAAACATTTCTGACACAACTCTCCAGCTTCACCTTTCCCTGGCTGTTAAGAATCTCACTTCCCTTCAAGTTCAAAGCCAACCAGAAGTTGTGGGCTTTCCTGAACTGAGCTTGATGGCGCCTCCCAAGAAATCAAAGAAAAATAAGAAAGATGGTAAATTGAAGAAATGCAAAAGCTCAAGTGTGGCTCCAGTCGAGCCTAAAGCTCCTGACTCTGAGTGGTGGGATAGTTTCTGGCACAAGAATGCTTCAAACCCAGGCTCTTCACTATCGAAAGATGAGGAAGAAGGATTTAAGTATTTCTTTAGGGTCTCTAGAAAGACTTTTGATTACATCTGTTCTATTGTAAGAGAAGACCTTGTGTCGAGGCCACCGTCAGGGCTCATCAACATTGAAGGGAGGCTTCTTAGTGTTGAGAAACAGGTTGCAATTGCCATGAGAAGGTTGGCATCTGGTGAGTCTCAGGTCTCAGTGGGAGCTGCCTTTGGGGTCGGCCAGTCCACAGTTTCTCAGGTGACTTGGAGATTCATTGAAGCATTGGAAGAACGTGCCAAGCACCATCTCAAGTGGCCTGATTCCAATAGGATGGAGGAAATTAAGTCTAAACTTGAAGCATCTTTTGGATTGCCTAATTGCTGTGGAGCCATAGACGGCACACACATCATAATGACACTTCCTACTGTTCAAGCATCAGACGATTGGTGTGACACTGAGAAAAATTACAGCATGCTCTTGCAGGGAACTGTCGATCATGAGTTAAGATTCCTTGATATTGTGACCGGTTGGCCTGGGGGAATGACAGTGTCTAGACTATTAAAGTGTTCAGGGCTTTTCAAGCTGTGCGAAAGTGGACAGCGTTTAAATGGGAATGTTAGAACTTTATCTGAAGGAGGAGAGATCAGAGAATATGTGGTTGGTGGGGTTGGCTATCCTCTCCTTCCCTGGCTCATAACTCCTTATGAAGGCAGTGGCCTTCCAGCTTCTGTTGTTTCTGCTTTTAATGCCGCGCATGAGGCTGCAAGGTCTCTTGCAGTAAGGGCATTCTCGCAGTTAAAGGGCACTTGGAGAATCCTCAGCAAGGTTATGTGGAGACCAGATAAACGGAAACTTCCAAGCATTATCTTGGTATGTTGTTTACTCCACAATATAATAATCGACTGTGGAGATATATTAAACCCAGATGTTGCTTTATCTGGTCATCACGACTCGGGATATGGAGAGCAATGCTGTAAGCAAGTTGATCCATTGGGAAGGTCTATGAGCGAGAACTTAGTTAGACACTGGCAGCATAGCAAGCAAACAGCTGCATCAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010639 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031519 GO:0031935 GO:0031936 GO:0031974 GO:0031981 GO:0032991 GO:0033043 GO:0033044 GO:0034708 GO:0035097 GO:0035098 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045815 GO:0045893 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0080090 GO:1902275 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1990234 GO:2000112 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDE_Tnp_4

Protein Analysis

532

Amino Acids

59.23

Weight (kDa)

8.75

Isoelectric Point (pI)

48.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Plant_tran	PF04827	289 - 480	4.3e-07	Plant transposon protein
DDE_Tnp_4	PF13359	310 - 476	5.8e-19	DDE superfamily endonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011704)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63270
fragaria_vesca	FvH4_2g23101
malus_domestica	MD03G1260000.v1.1 MD11G1280300.v1.1
prunus_persica	Prupe.3G034000_v2.0.a1 Prupe.8G236200_v2.0.a1
pyrus_communis	pycom03g20770
rosa_chinensis	RchiOBHm_Chr6g0290271
rosa_laevigata	RLG00000012229
rosa_multiflora	Rmu_sc0034661.1_g000001 Rmu_ssc0000208.1_g000001
rosa_roxburghii	Rroxscaffold_7G00177190
rosa_rugosa	Rorug06G0211400
rosa_samantha	Rh6AG321700 Rh6BG329000 Rh6CG334900 Rh6DG322000
rosa_wichuraiana	Rw6G027790 Rw6G027890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	152
Acc36I	ACCTGC	1 cut(s)	152
AccB1I	GGYRCC	1 cut(s)	400
AccI	GTMKAC	1 cut(s)	63
AccII	CGCG	1 cut(s)	1289
AciI	CCGC	1 cut(s)	1287
AclWI	GGATC	1 cut(s)	1517
AcoI	YGGCCR	1 cut(s)	775
AcuI	CTGAAG	1 cut(s)	1188
AcyI	GRCGYC	1 cut(s)	401
AfaI	GTAC	2 cut(s)	5, 113
AfiI	CCNNNNNNNGG	5 cut(s)	322, 659, 723, 1244, 1360
AgeI	ACCGGT	1 cut(s)	1061
AgsI	TTSAA	9 cut(s)	350, 356, 445, 534, 677, 815, 893, 968, 1117
AhdI	GACNNNNNGTC	1 cut(s)	643
AjnI	CCWGG	4 cut(s)	321, 538, 1069, 1223
AjuI	GAANNNNNNNTTGG	4 cut(s)	885, 917, 1179, 1211
AluBI	AGCT	8 cut(s)	310, 393, 459, 488, 761, 1120, 1262, 1586
AluI	AGCT	8 cut(s)	310, 393, 459, 488, 761, 1120, 1262, 1586
Alw26I	GTCTC	5 cut(s)	598, 747, 754, 1311, 1366
AlwI	GGATC	1 cut(s)	1517
AlwNI	CAGNNNCTG	1 cut(s)	1265
Ama87I	CYCGRG	1 cut(s)	1489
AoxI	GGCC	7 cut(s)	138, 192, 650, 775, 851, 1067, 1252
ApeKI	GCWGC	4 cut(s)	761, 1298, 1567, 1586
AsiGI	ACCGGT	1 cut(s)	1061
AspLEI	GCGC	2 cut(s)	403, 1291
AspS9I	GGNCC	2 cut(s)	138, 192
AsuHPI	GGTGA	5 cut(s)	86, 176, 305, 749, 808
AvaI	CYCGRG	1 cut(s)	1489
BaeGI	GKGCMC	1 cut(s)	1343
BanI	GGYRCC	1 cut(s)	400
BanII	GRGCYC	1 cut(s)	666
BbsI	GAAGAC	1 cut(s)	642
BbvCI	CCTCAGC	1 cut(s)	1355
BbvI	GCAGC	4 cut(s)	748, 1285, 1573, 1579
BccI	CCATC	5 cut(s)	262, 391, 428, 849, 862
BceAI	ACGGC	1 cut(s)	949
BciT130I	CCWGG	4 cut(s)	323, 540, 1071, 1225
BcoDI	GTCTC	5 cut(s)	598, 747, 754, 1311, 1366
BfaI	CTAG	2 cut(s)	597, 1089
BfoI	RGCGCY	1 cut(s)	404
BfuAI	ACCTGC	1 cut(s)	152
BisI	GCNGC	5 cut(s)	762, 1287, 1299, 1568, 1587
BlsI	GCNGC	5 cut(s)	763, 1288, 1300, 1569, 1588
BmcAI	AGTACT	1 cut(s)	113
Bme1390I	CCNGG	4 cut(s)	323, 540, 1071, 1225
BmeRI	GACNNNNNGTC	1 cut(s)	643
BmeT110I	CYCGRG	1 cut(s)	1489
BmgT120I	GGNCC	2 cut(s)	138, 192
BmiI	GGNNCC	3 cut(s)	402, 471, 925
BmrFI	CCNGG	4 cut(s)	323, 540, 1071, 1225
BmsI	GCATC	3 cut(s)	740, 905, 980
BpiI	GAAGAC	1 cut(s)	642
BpmI	CTGGAG	2 cut(s)	290, 456
Bpu10I	CCTNAGC	1 cut(s)	1355
BpuEI	CTTGAG	2 cut(s)	445, 830
BsaHI	GRCGYC	1 cut(s)	401
BsaI	GGTCTC	4 cut(s)	598, 754, 1311, 1366
BsaJI	CCNNGG	5 cut(s)	148, 321, 538, 1070, 1223
BsaWI	WCCGGW	1 cut(s)	1061
Bsc4I	CCNNNNNNNGG	5 cut(s)	322, 659, 723, 1244, 1360
Bse118I	RCCGGY	1 cut(s)	1061
Bse1I	ACTGG	3 cut(s)	473, 778, 1568
Bse3DI	GCAATG	2 cut(s)	112, 1511
BseBI	CCWGG	4 cut(s)	323, 540, 1071, 1225
BseDI	CCNNGG	5 cut(s)	148, 321, 538, 1070, 1223
BseGI	GGATG	1 cut(s)	873
BseLI	CCNNNNNNNGG	5 cut(s)	322, 659, 723, 1244, 1360
BseMI	GCAATG	2 cut(s)	112, 1511
BseMII	CTCAG	7 cut(s)	380, 489, 758, 765, 806, 984, 1369
BseNI	ACTGG	3 cut(s)	473, 778, 1568
BseRI	GAGGAG	1 cut(s)	1188
BseSI	GKGCMC	1 cut(s)	1343
BseXI	GCAGC	4 cut(s)	748, 1285, 1573, 1579
Bsh1236I	CGCG	1 cut(s)	1289
Bsh1285I	CGRYCG	1 cut(s)	74
BshFI	GGCC	7 cut(s)	140, 194, 652, 777, 853, 1069, 1254
BshNI	GGYRCC	1 cut(s)	400
BshTI	ACCGGT	1 cut(s)	1061
BsiEI	CGRYCG	1 cut(s)	74
BsiHKCI	CYCGRG	1 cut(s)	1489
BsiSI	CCGG	1 cut(s)	1062
BslI	CCNNNNNNNGG	5 cut(s)	322, 659, 723, 1244, 1360
BsmAI	GTCTC	5 cut(s)	598, 747, 754, 1311, 1366
BsmI	GAATGC	2 cut(s)	532, 1322
BsnI	GGCC	7 cut(s)	140, 194, 652, 777, 853, 1069, 1254
Bso31I	GGTCTC	4 cut(s)	598, 754, 1311, 1366
BsoBI	CYCGRG	1 cut(s)	1489
Bsp1286I	GDGCHC	2 cut(s)	666, 1343
Bsp143I	GATC	4 cut(s)	71, 1030, 1179, 1522
Bsp19I	CCATGG	1 cut(s)	148
BspACI	CCGC	1 cut(s)	1287
BspANI	GGCC	7 cut(s)	140, 194, 652, 777, 853, 1069, 1254
BspCNI	CTCAG	7 cut(s)	381, 490, 757, 764, 805, 985, 1368
BspFNI	CGCG	1 cut(s)	1289
BspHI	TCATGA	1 cut(s)	1033
BspLI	GGNNCC	3 cut(s)	402, 471, 925
BspMI	ACCTGC	1 cut(s)	152
BspPI	GGATC	1 cut(s)	1517
BspQI	GCTCTTC	1 cut(s)	550
BspT107I	GGYRCC	1 cut(s)	400
BspTNI	GGTCTC	4 cut(s)	598, 754, 1311, 1366
BsrDI	GCAATG	2 cut(s)	112, 1511
BsrFI	RCCGGY	1 cut(s)	1061
BsrI	ACTGG	3 cut(s)	473, 778, 1568
BssAI	RCCGGY	1 cut(s)	1061
BssECI	CCNNGG	5 cut(s)	148, 321, 538, 1070, 1223
BssMI	GATC	4 cut(s)	71, 1030, 1179, 1522
BssNAI	GTATAC	1 cut(s)	64
BssNI	GRCGYC	1 cut(s)	401
BssT1I	CCWWGG	1 cut(s)	148
Bst1107I	GTATAC	1 cut(s)	64
Bst2UI	CCWGG	4 cut(s)	323, 540, 1071, 1225
Bst4CI	ACNGT	7 cut(s)	116, 657, 787, 964, 1027, 1084, 1442
Bst6I	CTCTTC	2 cut(s)	278, 550
BstACI	GRCGYC	1 cut(s)	401
BstC8I	GCNNGC	2 cut(s)	1010, 1577
BstDEI	CTNAG	9 cut(s)	389, 498, 689, 744, 751, 792, 993, 1355, 1552
BstDSI	CCRYGG	1 cut(s)	148
BstENI	CCTNNNNNAGG	2 cut(s)	1242, 1358
BstF5I	GGATG	1 cut(s)	873
BstFNI	CGCG	1 cut(s)	1289
BstH2I	RGCGCY	1 cut(s)	404
BstHHI	GCGC	2 cut(s)	403, 1291
BstKTI	GATC	4 cut(s)	74, 1033, 1182, 1525
BstMAI	GTCTC	5 cut(s)	598, 747, 754, 1311, 1366
BstMBI	GATC	4 cut(s)	71, 1030, 1179, 1522
BstMCI	CGRYCG	1 cut(s)	74
BstMWI	GCNNNNNNNGC	5 cut(s)	1117, 1283, 1295, 1319, 1576
BstNI	CCWGG	4 cut(s)	323, 540, 1071, 1225
BstNSI	RCATGY	1 cut(s)	1012
BstSCI	CCNGG	4 cut(s)	321, 538, 1069, 1223
BstSLI	GKGCMC	1 cut(s)	1343
BstUI	CGCG	1 cut(s)	1289
BstV1I	GCAGC	4 cut(s)	748, 1285, 1573, 1579
BstV2I	GAAGAC	1 cut(s)	642
BstXI	CCANNNNNNTGG	1 cut(s)	868
BstZ17I	GTATAC	1 cut(s)	64
BsuRI	GGCC	7 cut(s)	140, 194, 652, 777, 853, 1069, 1254
BtgI	CCRYGG	1 cut(s)	148
BtsCI	GGATG	1 cut(s)	873
BtsI	GCAGTG	1 cut(s)	1255
BtsIMutI	CAGTG	5 cut(s)	759, 990, 1089, 1255, 1561
BveI	ACCTGC	1 cut(s)	152
Cac8I	GCNNGC	2 cut(s)	1010, 1577
CaiI	CAGNNNCTG	1 cut(s)	1265
CciI	TCATGA	1 cut(s)	1033
CfoI	GCGC	2 cut(s)	403, 1291
Cfr10I	RCCGGY	1 cut(s)	1061
Cfr13I	GGNCC	2 cut(s)	138, 192
Csp6I	GTAC	2 cut(s)	4, 112
CspAI	ACCGGT	1 cut(s)	1061
CviAII	CATG	5 cut(s)	149, 718, 1009, 1034, 1292
CviQI	GTAC	2 cut(s)	4, 112
DdeI	CTNAG	9 cut(s)	389, 498, 689, 744, 751, 792, 993, 1355, 1552
DinI	GGCGCC	1 cut(s)	402
DpnI	GATC	4 cut(s)	73, 1032, 1181, 1524
DpnII	GATC	4 cut(s)	71, 1030, 1179, 1522
DraI	TTTAAA	1 cut(s)	1143
DriI	GACNNNNNGTC	1 cut(s)	643
EaeI	YGGCCR	1 cut(s)	775
Eam1104I	CTCTTC	2 cut(s)	278, 550
Eam1105I	GACNNNNNGTC	1 cut(s)	643
EarI	CTCTTC	2 cut(s)	278, 550
Eco130I	CCWWGG	1 cut(s)	148
Eco24I	GRGCYC	1 cut(s)	666
Eco31I	GGTCTC	4 cut(s)	598, 754, 1311, 1366
Eco57I	CTGAAG	1 cut(s)	1188
Eco88I	CYCGRG	1 cut(s)	1489
EcoNI	CCTNNNNNAGG	2 cut(s)	1242, 1358
EcoRII	CCWGG	4 cut(s)	321, 538, 1069, 1223
EcoT14I	CCWWGG	1 cut(s)	148
EcoT38I	GRGCYC	1 cut(s)	666
EgeI	GGCGCC	1 cut(s)	402
EheI	GGCGCC	1 cut(s)	402
ErhI	CCWWGG	1 cut(s)	148
FaeI	CATG	5 cut(s)	152, 721, 1012, 1037, 1295
FalI	AAGNNNNNCTT	4 cut(s)	569, 601, 669, 701
FatI	CATG	5 cut(s)	148, 717, 1008, 1033, 1291
FblI	GTMKAC	1 cut(s)	63
Fnu4HI	GCNGC	5 cut(s)	762, 1287, 1299, 1568, 1587
FokI	GGATG	1 cut(s)	880
FriOI	GRGCYC	1 cut(s)	666
Fsp4HI	GCNGC	5 cut(s)	762, 1287, 1299, 1568, 1587
FspBI	CTAG	2 cut(s)	597, 1089
GlaI	GCGC	2 cut(s)	402, 1290
GluI	GCNGC	5 cut(s)	762, 1287, 1299, 1568, 1587
GsuI	CTGGAG	2 cut(s)	290, 456
HaeII	RGCGCY	1 cut(s)	404
HaeIII	GGCC	7 cut(s)	140, 194, 652, 777, 853, 1069, 1254
HapII	CCGG	1 cut(s)	1062
HhaI	GCGC	2 cut(s)	403, 1291
Hin1I	GRCGYC	1 cut(s)	401
Hin1II	CATG	5 cut(s)	152, 721, 1012, 1037, 1295
Hin6I	GCGC	2 cut(s)	401, 1289
HinP1I	GCGC	2 cut(s)	401, 1289
HincII	GTYRAC	1 cut(s)	227
HindII	GTYRAC	1 cut(s)	227
HinfI	GANTC	8 cut(s)	334, 494, 740, 807, 857, 1044, 1350, 1487
HpaII	CCGG	1 cut(s)	1062
HphI	GGTGA	5 cut(s)	86, 176, 305, 749, 808
Hpy166II	GTNNAC	5 cut(s)	64, 227, 783, 1133, 1418
Hpy188I	TCNGA	6 cut(s)	128, 295, 499, 976, 1168, 1184
Hpy188III	TCNNGA	7 cut(s)	383, 491, 597, 1034, 1089, 1484, 1491
Hpy8I	GTNNAC	5 cut(s)	64, 227, 783, 1133, 1418
HpyCH4III	ACNGT	7 cut(s)	116, 657, 787, 964, 1027, 1084, 1442
HpyCH4IV	ACGT	1 cut(s)	829
HpyCH4V	TGCA	8 cut(s)	161, 180, 453, 710, 1018, 1301, 1313, 1589
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1117, 1283, 1295, 1319, 1576
HpyF3I	CTNAG	9 cut(s)	389, 498, 689, 744, 751, 792, 993, 1355, 1552
HpySE526I	ACGT	1 cut(s)	829
Hsp92I	GRCGYC	1 cut(s)	401
Hsp92II	CATG	5 cut(s)	152, 721, 1012, 1037, 1295
HspAI	GCGC	2 cut(s)	401, 1289
KasI	GGCGCC	1 cut(s)	400
Kzo9I	GATC	4 cut(s)	71, 1030, 1179, 1522
LguI	GCTCTTC	1 cut(s)	550
LmnI	GCTCC	5 cut(s)	211, 475, 493, 758, 923
Lsp1109I	GCAGC	4 cut(s)	748, 1285, 1573, 1579
LweI	GCATC	3 cut(s)	740, 905, 980
MaeI	CTAG	2 cut(s)	597, 1089
MaeII	ACGT	1 cut(s)	829
MaeIII	GTNAC	4 cut(s)	143, 796, 986, 1057
MalI	GATC	4 cut(s)	73, 1032, 1181, 1524
MboI	GATC	4 cut(s)	71, 1030, 1179, 1522
MboII	GAAGA	6 cut(s)	265, 457, 537, 578, 647, 836
MfeI	CAATTG	1 cut(s)	711
MhlI	GDGCHC	2 cut(s)	666, 1343
MluCI	AATT	7 cut(s)	57, 247, 440, 711, 876, 913, 1000
Mly113I	GGCGCC	1 cut(s)	401
MlyI	GAGTC	3 cut(s)	488, 749, 1481
MnlI	CCTC	9 cut(s)	414, 556, 642, 675, 865, 1166, 1224, 1288, 1364
MslI	CAYNNNNRTG	3 cut(s)	525, 947, 1594
MspA1I	CMGCKG	1 cut(s)	1586
MspI	CCGG	1 cut(s)	1062
MspR9I	CCNGG	4 cut(s)	323, 540, 1071, 1225
MunI	CAATTG	1 cut(s)	711
Mva1269I	GAATGC	2 cut(s)	532, 1322
MvaI	CCWGG	4 cut(s)	323, 540, 1071, 1225
MvnI	CGCG	1 cut(s)	1289
MwoI	GCNNNNNNNGC	5 cut(s)	1117, 1283, 1295, 1319, 1576
NarI	GGCGCC	1 cut(s)	401
NcoI	CCATGG	1 cut(s)	148
NdeII	GATC	4 cut(s)	71, 1030, 1179, 1522
NlaIII	CATG	5 cut(s)	152, 721, 1012, 1037, 1295
NlaIV	GGNNCC	3 cut(s)	402, 471, 925
NmuCI	GTSAC	3 cut(s)	796, 986, 1057
NspI	RCATGY	1 cut(s)	1012
PaeI	GCATGC	1 cut(s)	1012
PagI	TCATGA	1 cut(s)	1033
PaqCI	CACCTGC	1 cut(s)	152
PciSI	GCTCTTC	1 cut(s)	550
PcsI	WCGNNNNNNNCGW	1 cut(s)	653
PctI	GAATGC	2 cut(s)	532, 1322
PfeI	GAWTC	5 cut(s)	334, 807, 857, 1044, 1350
PflFI	GACNNNGTC	1 cut(s)	1084
PinAI	ACCGGT	1 cut(s)	1061
PkrI	GCNGC	5 cut(s)	763, 1288, 1300, 1569, 1588
Ple19I	CGATCG	1 cut(s)	74
PleI	GAGTC	3 cut(s)	488, 748, 1481
PluTI	GGCGCC	1 cut(s)	404
PpsI	GAGTC	3 cut(s)	488, 748, 1481
Psp6I	CCWGG	4 cut(s)	321, 538, 1069, 1223
PspGI	CCWGG	4 cut(s)	321, 538, 1069, 1223
PspN4I	GGNNCC	3 cut(s)	402, 471, 925
PspPI	GGNCC	2 cut(s)	138, 192
PstNI	CAGNNNCTG	1 cut(s)	1265
PsyI	GACNNNGTC	1 cut(s)	1084
PvuI	CGATCG	1 cut(s)	74
PvuII	CAGCTG	1 cut(s)	1586
RsaI	GTAC	2 cut(s)	5, 113
RsaNI	GTAC	2 cut(s)	4, 112
RseI	CAYNNNNRTG	3 cut(s)	525, 947, 1594
SapI	GCTCTTC	1 cut(s)	550
SatI	GCNGC	5 cut(s)	762, 1287, 1299, 1568, 1587
Sau3AI	GATC	4 cut(s)	71, 1030, 1179, 1522
Sau96I	GGNCC	2 cut(s)	138, 192
ScaI	AGTACT	1 cut(s)	113
SchI	GAGTC	3 cut(s)	488, 749, 1481
ScrFI	CCNGG	4 cut(s)	323, 540, 1071, 1225
SduI	GDGCHC	2 cut(s)	666, 1343
SfaNI	GCATC	3 cut(s)	740, 905, 980
SfoI	GGCGCC	1 cut(s)	402
SmiMI	CAYNNNNRTG	3 cut(s)	525, 947, 1594
SmlI	CTYRAG	2 cut(s)	460, 845
SmoI	CTYRAG	2 cut(s)	460, 845
SphI	GCATGC	1 cut(s)	1012
Sse9I	AATT	7 cut(s)	57, 247, 440, 711, 876, 913, 1000
SsiI	CCGC	1 cut(s)	1287
SspDI	GGCGCC	1 cut(s)	400
SspMI	CTAG	2 cut(s)	597, 1089
StyD4I	CCNGG	4 cut(s)	321, 538, 1069, 1223
StyI	CCWWGG	1 cut(s)	148
TaaI	ACNGT	7 cut(s)	116, 657, 787, 964, 1027, 1084, 1442
TaiI	ACGT	1 cut(s)	832
TaqI	TCGA	6 cut(s)	70, 477, 554, 647, 1029, 1437
TaqII	GACCGA	1 cut(s)	64
TasI	AATT	7 cut(s)	57, 247, 440, 711, 876, 913, 1000
TatI	WGTACW	1 cut(s)	111
TauI	GCSGC	1 cut(s)	1289
TfiI	GAWTC	5 cut(s)	334, 807, 857, 1044, 1350
TscAI	CASTG	5 cut(s)	759, 997, 1089, 1255, 1568
TseFI	GTSAC	3 cut(s)	796, 986, 1057
TseI	GCWGC	4 cut(s)	761, 1298, 1567, 1586
Tsp45I	GTSAC	3 cut(s)	796, 986, 1057
TspDTI	ATGAA	3 cut(s)	256, 799, 1257
TspGWI	ACGGA	1 cut(s)	1399
TspRI	CASTG	5 cut(s)	759, 997, 1089, 1255, 1568
Tth111I	GACNNNGTC	1 cut(s)	1084
XagI	CCTNNNNNAGG	2 cut(s)	1242, 1358
XbaI	TCTAGA	2 cut(s)	596, 1088
XceI	RCATGY	1 cut(s)	1012
XcmI	CCANNNNNNNNNTGG	1 cut(s)	724
XmiI	GTMKAC	1 cut(s)	63
XspI	CTAG	2 cut(s)	597, 1089
ZrmI	AGTACT	1 cut(s)	113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.