Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0011704

Physical Location & Seq

Genomic Coordinates Reverse (-)

16709487 .. 16712197

Gene Structure 2711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00177190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGAGTACCGTTCGCTTTTCAGAACGTATTGGGCCTGTAACCATGGGGGTTGTGCAGCTTCACCTTTCCCTGGCTGTTAAGAATCTCACTTCCCTTCAAGTTCAAAGCCAACCAGAAGTTGTGGGCTTTCCTGAACTGAGCTTGATGGCGCCTCCCAAGAAATCAAAGAAAAATAAGAAAGATGGTAAGTTGAAGAAATGCAAAAGCTCAAGTGTGGCTCCAGTCGAGCCTACAGCTCCTGACTCTGAGTGGTGGGATAGTTTCTGGCACAAGAATGCTTCAAACCCAGGCTCTTCACTATCGAAAAATGAGGAAGAAGGATTTAAGTATTTCTTTAGGGTCTCTAGAAAGACTTTTGATTACATCTGTTCTATTGTAAGAGAAGACCTTGTGTCGAGGCCACCATCAGGGCTCATCAACATTGAAGGGAGGCTTCTTAGTGTTGAGAAACAGGTTGCAATTGCCATGAGAAGGTTGGCATCTGGTGAGTCTCAGGTCTCAGTGGGAGCCGCCTTTGGGGTTGGCCAGTCCACAGTTTCTCAGGTGACTTGGAGATTCATTGAAGCATTGGAAGAACGTGCCAAGCACCATCTCAAGTGGCCTGATTCCAATAGGATGGAGGAAATTAAGTCTAAACTTGAAGCATCTTTTGGATTGCCTAATTGCTGTGGAGCCATAGATGGCACACACATCATAATGACACTTCCTACTGTTCAAGCATCAGACGATTGGTGTGACACTGAGAAAAATTACAGCATGCTCTTGCAGGGAACTGTTGATCATGAGTTAAGATTCCTTGATATTGTGACCGGTTGGCCTGGGGGAATGACAGTGTCTAGACTATTAAAGTGTTCAGGACTTTTCAAGCTGTGCGAAAGTGGACAGCGTTTAAATGGGAATGTTAGAACTTTATCTGAAGGAGGAGAGATCAGAGAATATGTGGTTGGTGGGGTTGGCTATCCTCTCCTTCCCTGGCTCATAACTCCTTATGAAAGCAGTGGCCTTCCAGCTTCTGTTGTTTCCGCTTTTAATGCCGCGCATGAGGCTGCAAGGTCTCTTGCAGTAAGGGCATTCTCGCAGTTAAAGGGCACTTGGAGAATCCTCAGCAAGGTTATGTGGAGACCAGATAAACGGAAACTTCCAAGCATTATCTTGGTATGCTGTTTACTCCACAATATAATAATTGACTGTGGAGATATATTAAACCCAGATGTTGCTTTATCTGGTCATCACGACTCGGGATATGGAGAGCAATGCTGTAAGCAAGTTGATCCATTGGGAAGGTCTATGAGGGAGAACTTAGTTAGACACTGGCAGCATAGCAAGCAAACAGCTGCATCAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010639 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031519 GO:0031935 GO:0031936 GO:0031974 GO:0031981 GO:0032991 GO:0033043 GO:0033044 GO:0034708 GO:0035097 GO:0035098 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045815 GO:0045893 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0080090 GO:1902275 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1990234 GO:2000112 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDE_Tnp_4

Protein Analysis

448

Amino Acids

49.61

Weight (kDa)

8.9

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Plant_tran	PF04827	205 - 396	1.1e-07	Plant transposon protein
DDE_Tnp_4	PF13359	226 - 392	1e-18	DDE superfamily endonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011704)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63270
fragaria_vesca	FvH4_2g23101
malus_domestica	MD03G1260000.v1.1 MD11G1280300.v1.1
prunus_persica	Prupe.3G034000_v2.0.a1 Prupe.8G236200_v2.0.a1
pyrus_communis	pycom03g20770
rosa_chinensis	RchiOBHm_Chr6g0290271
rosa_laevigata	RLG00000012229
rosa_multiflora	Rmu_sc0034661.1_g000001 Rmu_ssc0000208.1_g000001
rosa_roxburghii	Rroxscaffold_7G00177190
rosa_rugosa	Rorug06G0211400
rosa_samantha	Rh6AG321700 Rh6BG329000 Rh6CG334900 Rh6DG322000
rosa_wichuraiana	Rw6G027790 Rw6G027890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	148
AccII	CGCG	1 cut(s)	1037
AciI	CCGC	3 cut(s)	510, 1023, 1035
AclWI	GGATC	1 cut(s)	1265
AcoI	YGGCCR	1 cut(s)	523
AcuI	CTGAAG	1 cut(s)	936
AcyI	GRCGYC	1 cut(s)	149
AfaI	GTAC	1 cut(s)	7
AfiI	CCNNNNNNNGG	5 cut(s)	70, 407, 471, 516, 1108
AgeI	ACCGGT	1 cut(s)	809
AgsI	TTSAA	9 cut(s)	98, 104, 193, 282, 425, 563, 641, 716, 865
AhdI	GACNNNNNGTC	1 cut(s)	391
AjnI	CCWGG	4 cut(s)	69, 286, 817, 971
AjuI	GAANNNNNNNTTGG	4 cut(s)	633, 665, 927, 959
AluBI	AGCT	7 cut(s)	58, 141, 207, 236, 868, 1010, 1334
AluI	AGCT	7 cut(s)	58, 141, 207, 236, 868, 1010, 1334
Alw26I	GTCTC	5 cut(s)	346, 495, 502, 1059, 1114
AlwI	GGATC	1 cut(s)	1265
AlwNI	CAGNNNCTG	2 cut(s)	239, 1013
Ama87I	CYCGRG	1 cut(s)	1237
AoxI	GGCC	6 cut(s)	32, 398, 523, 599, 815, 1000
ApeKI	GCWGC	4 cut(s)	55, 1046, 1315, 1334
AsiGI	ACCGGT	1 cut(s)	809
AspLEI	GCGC	2 cut(s)	151, 1039
AspS9I	GGNCC	1 cut(s)	32
AsuHPI	GGTGA	3 cut(s)	53, 497, 556
AvaI	CYCGRG	1 cut(s)	1237
BaeGI	GKGCMC	1 cut(s)	1091
BalI	TGGCCA	1 cut(s)	525
BanI	GGYRCC	1 cut(s)	148
BanII	GRGCYC	1 cut(s)	414
BbsI	GAAGAC	1 cut(s)	390
BbvCI	CCTCAGC	1 cut(s)	1103
BbvI	GCAGC	4 cut(s)	67, 1033, 1321, 1327
BccI	CCATC	6 cut(s)	139, 176, 412, 597, 610, 674
BciT130I	CCWGG	4 cut(s)	71, 288, 819, 973
BclI	TGATCA	1 cut(s)	778
BcoDI	GTCTC	5 cut(s)	346, 495, 502, 1059, 1114
BfaI	CTAG	2 cut(s)	345, 837
BfmI	CTRYAG	1 cut(s)	231
BfoI	RGCGCY	1 cut(s)	152
BisI	GCNGC	6 cut(s)	56, 510, 1035, 1047, 1316, 1335
BlsI	GCNGC	6 cut(s)	57, 511, 1036, 1048, 1317, 1336
Bme1390I	CCNGG	4 cut(s)	71, 288, 819, 973
BmeRI	GACNNNNNGTC	1 cut(s)	391
BmeT110I	CYCGRG	1 cut(s)	1237
BmgT120I	GGNCC	1 cut(s)	32
BmiI	GGNNCC	4 cut(s)	150, 219, 508, 673
BmrFI	CCNGG	4 cut(s)	71, 288, 819, 973
BmsI	GCATC	3 cut(s)	488, 653, 728
BpiI	GAAGAC	1 cut(s)	390
BpmI	CTGGAG	1 cut(s)	204
Bpu10I	CCTNAGC	1 cut(s)	1103
BpuEI	CTTGAG	2 cut(s)	193, 578
BsaHI	GRCGYC	1 cut(s)	149
BsaI	GGTCTC	4 cut(s)	346, 502, 1059, 1114
BsaJI	CCNNGG	5 cut(s)	42, 69, 286, 818, 971
BsaWI	WCCGGW	1 cut(s)	809
Bsc4I	CCNNNNNNNGG	5 cut(s)	70, 407, 471, 516, 1108
Bse118I	RCCGGY	1 cut(s)	809
Bse1I	ACTGG	3 cut(s)	221, 526, 1316
Bse3DI	GCAATG	1 cut(s)	1259
BseBI	CCWGG	4 cut(s)	71, 288, 819, 973
BseDI	CCNNGG	5 cut(s)	42, 69, 286, 818, 971
BseGI	GGATG	1 cut(s)	621
BseLI	CCNNNNNNNGG	5 cut(s)	70, 407, 471, 516, 1108
BseMI	GCAATG	1 cut(s)	1259
BseMII	CTCAG	7 cut(s)	128, 237, 506, 513, 554, 732, 1117
BseNI	ACTGG	3 cut(s)	221, 526, 1316
BseRI	GAGGAG	1 cut(s)	936
BseSI	GKGCMC	1 cut(s)	1091
BseXI	GCAGC	4 cut(s)	67, 1033, 1321, 1327
BsgI	GTGCAG	1 cut(s)	74
Bsh1236I	CGCG	1 cut(s)	1037
BshFI	GGCC	6 cut(s)	34, 400, 525, 601, 817, 1002
BshNI	GGYRCC	1 cut(s)	148
BshTI	ACCGGT	1 cut(s)	809
BsiHKCI	CYCGRG	1 cut(s)	1237
BsiSI	CCGG	1 cut(s)	810
BslI	CCNNNNNNNGG	5 cut(s)	70, 407, 471, 516, 1108
BsmAI	GTCTC	5 cut(s)	346, 495, 502, 1059, 1114
BsmI	GAATGC	2 cut(s)	280, 1070
BsnI	GGCC	6 cut(s)	34, 400, 525, 601, 817, 1002
Bso31I	GGTCTC	4 cut(s)	346, 502, 1059, 1114
BsoBI	CYCGRG	1 cut(s)	1237
Bsp1286I	GDGCHC	2 cut(s)	414, 1091
Bsp143I	GATC	3 cut(s)	778, 927, 1270
Bsp19I	CCATGG	1 cut(s)	42
BspACI	CCGC	3 cut(s)	510, 1023, 1035
BspANI	GGCC	6 cut(s)	34, 400, 525, 601, 817, 1002
BspCNI	CTCAG	7 cut(s)	129, 238, 505, 512, 553, 733, 1116
BspFNI	CGCG	1 cut(s)	1037
BspHI	TCATGA	1 cut(s)	781
BspLI	GGNNCC	4 cut(s)	150, 219, 508, 673
BspPI	GGATC	1 cut(s)	1265
BspQI	GCTCTTC	1 cut(s)	298
BspT107I	GGYRCC	1 cut(s)	148
BspTNI	GGTCTC	4 cut(s)	346, 502, 1059, 1114
BsrDI	GCAATG	1 cut(s)	1259
BsrFI	RCCGGY	1 cut(s)	809
BsrI	ACTGG	3 cut(s)	221, 526, 1316
BssAI	RCCGGY	1 cut(s)	809
BssECI	CCNNGG	5 cut(s)	42, 69, 286, 818, 971
BssMI	GATC	3 cut(s)	778, 927, 1270
BssNI	GRCGYC	1 cut(s)	149
BssT1I	CCWWGG	1 cut(s)	42
Bst2UI	CCWGG	4 cut(s)	71, 288, 819, 973
Bst4CI	ACNGT	6 cut(s)	10, 535, 712, 775, 832, 1190
Bst6I	CTCTTC	1 cut(s)	298
BstACI	GRCGYC	1 cut(s)	149
BstC8I	GCNNGC	2 cut(s)	758, 1325
BstDEI	CTNAG	9 cut(s)	137, 246, 437, 492, 499, 540, 741, 1103, 1300
BstDSI	CCRYGG	1 cut(s)	42
BstENI	CCTNNNNNAGG	1 cut(s)	1106
BstF5I	GGATG	1 cut(s)	621
BstFNI	CGCG	1 cut(s)	1037
BstH2I	RGCGCY	1 cut(s)	152
BstHHI	GCGC	2 cut(s)	151, 1039
BstKTI	GATC	3 cut(s)	781, 930, 1273
BstMAI	GTCTC	5 cut(s)	346, 495, 502, 1059, 1114
BstMBI	GATC	3 cut(s)	778, 927, 1270
BstMWI	GCNNNNNNNGC	4 cut(s)	1031, 1043, 1067, 1324
BstNI	CCWGG	4 cut(s)	71, 288, 819, 973
BstNSI	RCATGY	1 cut(s)	760
BstSCI	CCNGG	4 cut(s)	69, 286, 817, 971
BstSFI	CTRYAG	1 cut(s)	231
BstSLI	GKGCMC	1 cut(s)	1091
BstUI	CGCG	1 cut(s)	1037
BstV1I	GCAGC	4 cut(s)	67, 1033, 1321, 1327
BstV2I	GAAGAC	1 cut(s)	390
BstXI	CCANNNNNNTGG	1 cut(s)	616
BsuRI	GGCC	6 cut(s)	34, 400, 525, 601, 817, 1002
BtgI	CCRYGG	1 cut(s)	42
BtsCI	GGATG	1 cut(s)	621
BtsI	GCAGTG	1 cut(s)	1003
BtsIMutI	CAGTG	5 cut(s)	507, 738, 837, 1003, 1309
Cac8I	GCNNGC	2 cut(s)	758, 1325
CaiI	CAGNNNCTG	2 cut(s)	239, 1013
CciI	TCATGA	1 cut(s)	781
CfoI	GCGC	2 cut(s)	151, 1039
Cfr10I	RCCGGY	1 cut(s)	809
Cfr13I	GGNCC	1 cut(s)	32
Csp6I	GTAC	1 cut(s)	6
CspAI	ACCGGT	1 cut(s)	809
CviAII	CATG	5 cut(s)	43, 466, 757, 782, 1040
CviQI	GTAC	1 cut(s)	6
DdeI	CTNAG	9 cut(s)	137, 246, 437, 492, 499, 540, 741, 1103, 1300
DinI	GGCGCC	1 cut(s)	150
DpnI	GATC	3 cut(s)	780, 929, 1272
DpnII	GATC	3 cut(s)	778, 927, 1270
DraI	TTTAAA	1 cut(s)	891
DriI	GACNNNNNGTC	1 cut(s)	391
EaeI	YGGCCR	1 cut(s)	523
Eam1104I	CTCTTC	1 cut(s)	298
Eam1105I	GACNNNNNGTC	1 cut(s)	391
EarI	CTCTTC	1 cut(s)	298
Eco130I	CCWWGG	1 cut(s)	42
Eco24I	GRGCYC	1 cut(s)	414
Eco31I	GGTCTC	4 cut(s)	346, 502, 1059, 1114
Eco57I	CTGAAG	1 cut(s)	936
Eco88I	CYCGRG	1 cut(s)	1237
EcoNI	CCTNNNNNAGG	1 cut(s)	1106
EcoRII	CCWGG	4 cut(s)	69, 286, 817, 971
EcoT14I	CCWWGG	1 cut(s)	42
EcoT38I	GRGCYC	1 cut(s)	414
EgeI	GGCGCC	1 cut(s)	150
EheI	GGCGCC	1 cut(s)	150
ErhI	CCWWGG	1 cut(s)	42
FaeI	CATG	5 cut(s)	46, 469, 760, 785, 1043
FalI	AAGNNNNNCTT	4 cut(s)	317, 349, 417, 449
FatI	CATG	5 cut(s)	42, 465, 756, 781, 1039
FbaI	TGATCA	1 cut(s)	778
Fnu4HI	GCNGC	6 cut(s)	56, 510, 1035, 1047, 1316, 1335
FokI	GGATG	1 cut(s)	628
FriOI	GRGCYC	1 cut(s)	414
Fsp4HI	GCNGC	6 cut(s)	56, 510, 1035, 1047, 1316, 1335
FspBI	CTAG	2 cut(s)	345, 837
GlaI	GCGC	2 cut(s)	150, 1038
GluI	GCNGC	6 cut(s)	56, 510, 1035, 1047, 1316, 1335
GsuI	CTGGAG	1 cut(s)	204
HaeII	RGCGCY	1 cut(s)	152
HaeIII	GGCC	6 cut(s)	34, 400, 525, 601, 817, 1002
HapII	CCGG	1 cut(s)	810
HhaI	GCGC	2 cut(s)	151, 1039
Hin1I	GRCGYC	1 cut(s)	149
Hin1II	CATG	5 cut(s)	46, 469, 760, 785, 1043
Hin6I	GCGC	2 cut(s)	149, 1037
HinP1I	GCGC	2 cut(s)	149, 1037
HinfI	GANTC	8 cut(s)	82, 242, 488, 555, 605, 792, 1098, 1235
HpaII	CCGG	1 cut(s)	810
HphI	GGTGA	3 cut(s)	53, 497, 556
Hpy166II	GTNNAC	3 cut(s)	531, 881, 1166
Hpy188I	TCNGA	5 cut(s)	22, 247, 724, 916, 932
Hpy188III	TCNNGA	8 cut(s)	131, 239, 345, 782, 837, 855, 1232, 1239
Hpy8I	GTNNAC	3 cut(s)	531, 881, 1166
HpyAV	CCTTC	8 cut(s)	104, 311, 419, 465, 911, 977, 1013, 1275
HpyCH4III	ACNGT	6 cut(s)	10, 535, 712, 775, 832, 1190
HpyCH4IV	ACGT	2 cut(s)	25, 577
HpyCH4V	TGCA	7 cut(s)	55, 201, 458, 766, 1049, 1061, 1337
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1031, 1043, 1067, 1324
HpyF3I	CTNAG	9 cut(s)	137, 246, 437, 492, 499, 540, 741, 1103, 1300
HpySE526I	ACGT	2 cut(s)	25, 577
Hsp92I	GRCGYC	1 cut(s)	149
Hsp92II	CATG	5 cut(s)	46, 469, 760, 785, 1043
HspAI	GCGC	2 cut(s)	149, 1037
KasI	GGCGCC	1 cut(s)	148
Ksp22I	TGATCA	1 cut(s)	778
Kzo9I	GATC	3 cut(s)	778, 927, 1270
LguI	GCTCTTC	1 cut(s)	298
LmnI	GCTCC	4 cut(s)	223, 241, 506, 671
Lsp1109I	GCAGC	4 cut(s)	67, 1033, 1321, 1327
LweI	GCATC	3 cut(s)	488, 653, 728
MaeI	CTAG	2 cut(s)	345, 837
MaeII	ACGT	2 cut(s)	25, 577
MaeIII	GTNAC	4 cut(s)	37, 544, 734, 805
MalI	GATC	3 cut(s)	780, 929, 1272
MboI	GATC	3 cut(s)	778, 927, 1270
MboII	GAAGA	5 cut(s)	205, 285, 326, 395, 584
MfeI	CAATTG	1 cut(s)	459
MhlI	GDGCHC	2 cut(s)	414, 1091
MlsI	TGGCCA	1 cut(s)	525
MluCI	AATT	5 cut(s)	459, 624, 661, 748, 1182
MluNI	TGGCCA	1 cut(s)	525
Mly113I	GGCGCC	1 cut(s)	149
MlyI	GAGTC	3 cut(s)	236, 497, 1229
Mox20I	TGGCCA	1 cut(s)	525
MscI	TGGCCA	1 cut(s)	525
MseI	TTAA	9 cut(s)	78, 324, 627, 788, 845, 890, 1029, 1082, 1202
MslI	CAYNNNNRTG	3 cut(s)	273, 695, 1342
Msp20I	TGGCCA	1 cut(s)	525
MspA1I	CMGCKG	1 cut(s)	1334
MspI	CCGG	1 cut(s)	810
MspR9I	CCNGG	4 cut(s)	71, 288, 819, 973
MunI	CAATTG	1 cut(s)	459
Mva1269I	GAATGC	2 cut(s)	280, 1070
MvaI	CCWGG	4 cut(s)	71, 288, 819, 973
MvnI	CGCG	1 cut(s)	1037
MwoI	GCNNNNNNNGC	4 cut(s)	1031, 1043, 1067, 1324
NarI	GGCGCC	1 cut(s)	149
NcoI	CCATGG	1 cut(s)	42
NdeII	GATC	3 cut(s)	778, 927, 1270
NlaIII	CATG	5 cut(s)	46, 469, 760, 785, 1043
NlaIV	GGNNCC	4 cut(s)	150, 219, 508, 673
NmuCI	GTSAC	3 cut(s)	544, 734, 805
NspI	RCATGY	1 cut(s)	760
PaeI	GCATGC	1 cut(s)	760
PagI	TCATGA	1 cut(s)	781
PciSI	GCTCTTC	1 cut(s)	298
PctI	GAATGC	2 cut(s)	280, 1070
PfeI	GAWTC	5 cut(s)	82, 555, 605, 792, 1098
PflFI	GACNNNGTC	1 cut(s)	832
PinAI	ACCGGT	1 cut(s)	809
PkrI	GCNGC	6 cut(s)	57, 511, 1036, 1048, 1317, 1336
PleI	GAGTC	3 cut(s)	236, 496, 1229
PluTI	GGCGCC	1 cut(s)	152
PpsI	GAGTC	3 cut(s)	236, 496, 1229
Psp6I	CCWGG	4 cut(s)	69, 286, 817, 971
PspGI	CCWGG	4 cut(s)	69, 286, 817, 971
PspN4I	GGNNCC	4 cut(s)	150, 219, 508, 673
PspPI	GGNCC	1 cut(s)	32
PstNI	CAGNNNCTG	2 cut(s)	239, 1013
PsyI	GACNNNGTC	1 cut(s)	832
PvuII	CAGCTG	1 cut(s)	1334
RsaI	GTAC	1 cut(s)	7
RsaNI	GTAC	1 cut(s)	6
RseI	CAYNNNNRTG	3 cut(s)	273, 695, 1342
SapI	GCTCTTC	1 cut(s)	298
SaqAI	TTAA	9 cut(s)	78, 324, 627, 788, 845, 890, 1029, 1082, 1202
SatI	GCNGC	6 cut(s)	56, 510, 1035, 1047, 1316, 1335
Sau3AI	GATC	3 cut(s)	778, 927, 1270
Sau96I	GGNCC	1 cut(s)	32
SchI	GAGTC	3 cut(s)	236, 497, 1229
ScrFI	CCNGG	4 cut(s)	71, 288, 819, 973
SduI	GDGCHC	2 cut(s)	414, 1091
SfaNI	GCATC	3 cut(s)	488, 653, 728
SfcI	CTRYAG	1 cut(s)	231
SfoI	GGCGCC	1 cut(s)	150
SmiMI	CAYNNNNRTG	3 cut(s)	273, 695, 1342
SmlI	CTYRAG	2 cut(s)	208, 593
SmoI	CTYRAG	2 cut(s)	208, 593
SphI	GCATGC	1 cut(s)	760
Sse9I	AATT	5 cut(s)	459, 624, 661, 748, 1182
SsiI	CCGC	3 cut(s)	510, 1023, 1035
SspDI	GGCGCC	1 cut(s)	148
SspMI	CTAG	2 cut(s)	345, 837
StyD4I	CCNGG	4 cut(s)	69, 286, 817, 971
StyI	CCWWGG	1 cut(s)	42
TaaI	ACNGT	6 cut(s)	10, 535, 712, 775, 832, 1190
TaiI	ACGT	2 cut(s)	28, 580
TaqI	TCGA	3 cut(s)	225, 302, 395
TasI	AATT	5 cut(s)	459, 624, 661, 748, 1182
TauI	GCSGC	2 cut(s)	512, 1037
TfiI	GAWTC	5 cut(s)	82, 555, 605, 792, 1098
Tru1I	TTAA	9 cut(s)	78, 324, 627, 788, 845, 890, 1029, 1082, 1202
Tru9I	TTAA	9 cut(s)	78, 324, 627, 788, 845, 890, 1029, 1082, 1202
TscAI	CASTG	5 cut(s)	507, 745, 837, 1003, 1316
TseFI	GTSAC	3 cut(s)	544, 734, 805
TseI	GCWGC	4 cut(s)	55, 1046, 1315, 1334
Tsp45I	GTSAC	3 cut(s)	544, 734, 805
TspDTI	ATGAA	2 cut(s)	547, 1005
TspGWI	ACGGA	1 cut(s)	1147
TspRI	CASTG	5 cut(s)	507, 745, 837, 1003, 1316
Tth111I	GACNNNGTC	1 cut(s)	832
XagI	CCTNNNNNAGG	1 cut(s)	1106
XbaI	TCTAGA	2 cut(s)	344, 836
XceI	RCATGY	1 cut(s)	760
XcmI	CCANNNNNNNNNTGG	1 cut(s)	472
XspI	CTAG	2 cut(s)	345, 837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.