Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0011704

Physical Location & Seq

Genomic Coordinates Forward (+)

39807163 .. 39810185

Gene Structure 3023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1280300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1227 bp

ATGGCGCCTCCGAAGAAATCGAAGAAATCGAAGAAATCGAAGAAATCGAAGAAAAGCAAGAAAGACAGGAAATTTAGGAAAAGCAAGAGCGAAGTGGTTCCGGTGGAGGCGAAAGCAGTTGATTCTGATTGGTGGGATAGTTTCTGGCAGAAGAATTCTTCAACCCCTGCAGGTTCTTCAGTATCCAATGATGAGGAGGAAGGATTTAAGTTTTTCTTTAGGGTCTCGAAAAAGACTTTCGACTACATATGTTCACTTGTAAGAGAAGACCTTGTGTCGAGGCCGCCATCAGGACTCATCAACATAGAAGGAAGGCTTCTCAGTGTTGAGAAACAGGTTGCGATTGCCATGAGAAGGTTGGCATCCGGGGAGTCTCAAGTCTCAGTGGGAGCTGCCTTTGGGGTTGGCCAGTCCACAGTTTCTCAGGTCACTTGGAGATTCATTGAAGCATTGGAAGAGCGCGCAAAGCACCACCTCAAGTGGCCTGATTCGAAAAGAATAGAAGAGATTAAGTCTGAATTTGAAGCATCCTTTGGATTGCTGAATTGCTGTGGAGCCATAGATGGTACACACATCATTATGACCCTTCCAACTGTTCAAACATCAGACGATTGGTGTGATCCAGAGGAGAACTACAGCATGCTCTTGCAGGGAATTGTCGACCACGAGATGAGATTTCTTGACATTGTGACTGGTTGGCCCGGGGGCATGACTGTGTCTAGACTGTTAAAGTGTTCGGGGTTTTACAAGCTCTGTGAAGGCGGACAGCGTTTGAATGGAAATGCTAGAAGTTTATCTGGTGGAGTAGAGATTAGAGAATACTTAGTTGGTGGGGTTGGCTATCCTTTGCTTCCCTGGCTCATAACTCCTATTGAAAGCAATGCCGGCACAGCTTCCATTTCTTCTTTTAATGCCACACATGAGGCTGCAAGGTCGCTTGCAGTAAGGGCATTCTCGCAGTTGAAGGGCACTTGGAGAATCCTTAGCAAGGTTATGTGGAGACCCGACAAGCGAAAACTTCCTAGCATTATCTTGGTATGTTGTTTGCTTCACAATATAATCGTCGATAGTGGAGATATATTGGACCCAGATGTTGCTTTATCCGGTCATCATGACTCGGGATATGGAGAACAATGCTGCAAGCAAGTTGATCCATTGGGAAGGACCATGAGGGATAACTTAATCAAACACTGGGAGCGTGGCAAGCAGACCGGCGCACCAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010639 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031519 GO:0031935 GO:0031936 GO:0031974 GO:0031981 GO:0032991 GO:0033043 GO:0033044 GO:0034708 GO:0035097 GO:0035098 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045815 GO:0045893 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0080090 GO:1902275 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1990234 GO:2000112 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDE_Tnp_4

Protein Analysis

409

Amino Acids

45.42

Weight (kDa)

9.09

Isoelectric Point (pI)

41.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Plant_tran	PF04827	160 - 357	2.2e-06	Plant transposon protein
DDE_Tnp_4	PF13359	187 - 352	3.4e-18	DDE superfamily endonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011704)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63270
fragaria_vesca	FvH4_2g23101
malus_domestica	MD03G1260000.v1.1 MD11G1280300.v1.1
prunus_persica	Prupe.3G034000_v2.0.a1 Prupe.8G236200_v2.0.a1
pyrus_communis	pycom03g20770
rosa_chinensis	RchiOBHm_Chr6g0290271
rosa_laevigata	RLG00000012229
rosa_multiflora	Rmu_sc0034661.1_g000001 Rmu_ssc0000208.1_g000001
rosa_roxburghii	Rroxscaffold_7G00177190
rosa_rugosa	Rorug06G0211400
rosa_samantha	Rh6AG321700 Rh6BG329000 Rh6CG334900 Rh6DG322000
rosa_wichuraiana	Rw6G027790 Rw6G027890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	161
AccB1I	GGYRCC	1 cut(s)	4
AccI	GTMKAC	1 cut(s)	660
AccII	CGCG	1 cut(s)	462
AciI	CCGC	2 cut(s)	284, 762
AclWI	GGATC	2 cut(s)	614, 1145
AcoI	YGGCCR	1 cut(s)	406
AcsI	RAATTY	3 cut(s)	71, 154, 518
AcuI	CTGAAG	1 cut(s)	162
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	1 cut(s)	568
AfiI	CCNNNNNNNGG	3 cut(s)	290, 354, 988
AgsI	TTSAA	7 cut(s)	162, 446, 524, 599, 775, 875, 964
AhdI	GACNNNNNGTC	1 cut(s)	274
AjnI	CCWGG	1 cut(s)	854
AjuI	GAANNNNNNNTTGG	4 cut(s)	516, 548, 810, 842
AleI	CACNNNNGTG	1 cut(s)	1222
AluBI	AGCT	3 cut(s)	392, 751, 893
AluI	AGCT	3 cut(s)	392, 751, 893
Alw26I	GTCTC	4 cut(s)	229, 378, 385, 994
AlwI	GGATC	2 cut(s)	614, 1145
Ama87I	CYCGRG	2 cut(s)	701, 1117
AoxI	GGCC	4 cut(s)	281, 406, 482, 698
ApeKI	GCWGC	3 cut(s)	392, 926, 1137
ApoI	RAATTY	3 cut(s)	71, 154, 518
Asp700I	GAANNNNTTC	1 cut(s)	96
AspLEI	GCGC	4 cut(s)	7, 462, 464, 1217
AspS9I	GGNCC	3 cut(s)	699, 1084, 1164
AsuC2I	CCSGG	3 cut(s)	367, 702, 703
AsuII	TTCGAA	1 cut(s)	491
AvaI	CYCGRG	2 cut(s)	701, 1117
AvaII	GGWCC	2 cut(s)	1084, 1164
BaeGI	GKGCMC	1 cut(s)	971
BalI	TGGCCA	1 cut(s)	408
BanI	GGYRCC	1 cut(s)	4
BauI	CACGAG	1 cut(s)	665
BbsI	GAAGAC	1 cut(s)	273
BbvI	GCAGC	3 cut(s)	379, 913, 1124
BccI	CCATC	2 cut(s)	295, 557
BciT130I	CCWGG	1 cut(s)	856
BciVI	GTATCC	1 cut(s)	193
BcnI	CCSGG	3 cut(s)	367, 702, 703
BcoDI	GTCTC	4 cut(s)	229, 378, 385, 994
BfaI	CTAG	3 cut(s)	720, 786, 1023
BfmI	CTRYAG	2 cut(s)	168, 634
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	161
BfuI	GTATCC	1 cut(s)	193
BisI	GCNGC	4 cut(s)	284, 393, 927, 1138
BlsI	GCNGC	4 cut(s)	285, 394, 928, 1139
Bme1390I	CCNGG	4 cut(s)	367, 702, 703, 856
Bme18I	GGWCC	2 cut(s)	1084, 1164
BmeRI	GACNNNNNGTC	1 cut(s)	274
BmeT110I	CYCGRG	2 cut(s)	701, 1117
BmgT120I	GGNCC	3 cut(s)	699, 1084, 1164
BmiI	GGNNCC	4 cut(s)	6, 99, 556, 1086
BmrFI	CCNGG	4 cut(s)	367, 702, 703, 856
BmrI	ACTGGG	1 cut(s)	1201
BmsI	GCATC	2 cut(s)	371, 536
BmuI	ACTGGG	1 cut(s)	1201
BpiI	GAAGAC	1 cut(s)	273
Bpu10I	CCTNAGC	1 cut(s)	983
Bpu14I	TTCGAA	1 cut(s)	491
BpuEI	CTTGAG	2 cut(s)	360, 461
BpuMI	CCSGG	3 cut(s)	367, 702, 703
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	229, 994
BsaJI	CCNNGG	4 cut(s)	366, 701, 702, 854
BsaWI	WCCGGW	2 cut(s)	100, 1103
Bsc4I	CCNNNNNNNGG	3 cut(s)	290, 354, 988
Bse118I	RCCGGY	2 cut(s)	884, 1211
Bse1I	ACTGG	3 cut(s)	409, 697, 1196
Bse3DI	GCAATG	1 cut(s)	886
BseBI	CCWGG	1 cut(s)	856
BseDI	CCNNGG	4 cut(s)	366, 701, 702, 854
BseGI	GGATG	2 cut(s)	362, 527
BseLI	CCNNNNNNNGG	3 cut(s)	290, 354, 988
BseMI	GCAATG	1 cut(s)	886
BseMII	CTCAG	3 cut(s)	334, 396, 437
BseNI	ACTGG	3 cut(s)	409, 697, 1196
BsePI	GCGCGC	1 cut(s)	460
BseRI	GAGGAG	2 cut(s)	209, 641
BseSI	GKGCMC	1 cut(s)	971
BseXI	GCAGC	3 cut(s)	379, 913, 1124
Bsh1236I	CGCG	1 cut(s)	462
BshFI	GGCC	4 cut(s)	283, 408, 484, 700
BshNI	GGYRCC	1 cut(s)	4
BsiHKCI	CYCGRG	2 cut(s)	701, 1117
BsiSI	CCGG	6 cut(s)	101, 366, 702, 885, 1104, 1212
BslI	CCNNNNNNNGG	3 cut(s)	290, 354, 988
BsmAI	GTCTC	4 cut(s)	229, 378, 385, 994
BsmI	GAATGC	1 cut(s)	950
BsnI	GGCC	4 cut(s)	283, 408, 484, 700
Bso31I	GGTCTC	2 cut(s)	229, 994
BsoBI	CYCGRG	2 cut(s)	701, 1117
Bsp119I	TTCGAA	1 cut(s)	491
Bsp1286I	GDGCHC	1 cut(s)	971
Bsp143I	GATC	2 cut(s)	619, 1150
BspACI	CCGC	2 cut(s)	284, 762
BspANI	GGCC	4 cut(s)	283, 408, 484, 700
BspCNI	CTCAG	3 cut(s)	333, 395, 436
BspFNI	CGCG	1 cut(s)	462
BspHI	TCATGA	1 cut(s)	1111
BspLI	GGNNCC	4 cut(s)	6, 99, 556, 1086
BspMAI	CTGCAG	1 cut(s)	172
BspMI	ACCTGC	1 cut(s)	161
BspPI	GGATC	2 cut(s)	614, 1145
BspQI	GCTCTTC	1 cut(s)	450
BspT104I	TTCGAA	1 cut(s)	491
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	2 cut(s)	229, 994
BsrDI	GCAATG	1 cut(s)	886
BsrFI	RCCGGY	2 cut(s)	884, 1211
BsrI	ACTGG	3 cut(s)	409, 697, 1196
BssAI	RCCGGY	2 cut(s)	884, 1211
BssECI	CCNNGG	4 cut(s)	366, 701, 702, 854
BssHII	GCGCGC	1 cut(s)	460
BssMI	GATC	2 cut(s)	619, 1150
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	665
Bst2BI	CACGAG	1 cut(s)	665
Bst2UI	CCWGG	1 cut(s)	856
Bst4CI	ACNGT	4 cut(s)	418, 595, 715, 726
Bst6I	CTCTTC	2 cut(s)	450, 498
BstACI	GRCGYC	1 cut(s)	5
BstBI	TTCGAA	1 cut(s)	491
BstC8I	GCNNGC	6 cut(s)	462, 641, 886, 939, 1142, 1205
BstDEI	CTNAG	5 cut(s)	320, 382, 423, 823, 983
BstENI	CCTNNNNNAGG	1 cut(s)	986
BstF5I	GGATG	2 cut(s)	362, 527
BstFNI	CGCG	1 cut(s)	462
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	4 cut(s)	7, 462, 464, 1217
BstKTI	GATC	2 cut(s)	622, 1153
BstMAI	GTCTC	4 cut(s)	229, 378, 385, 994
BstMBI	GATC	2 cut(s)	619, 1150
BstMWI	GCNNNNNNNGC	6 cut(s)	466, 856, 885, 890, 947, 1204
BstNI	CCWGG	1 cut(s)	856
BstNSI	RCATGY	1 cut(s)	643
BstSCI	CCNGG	4 cut(s)	365, 700, 701, 854
BstSFI	CTRYAG	2 cut(s)	168, 634
BstSLI	GKGCMC	1 cut(s)	971
BstUI	CGCG	1 cut(s)	462
BstV1I	GCAGC	3 cut(s)	379, 913, 1124
BstV2I	GAAGAC	1 cut(s)	273
BsuI	GTATCC	1 cut(s)	193
BsuRI	GGCC	4 cut(s)	283, 408, 484, 700
BtsCI	GGATG	2 cut(s)	362, 527
BtsIMutI	CAGTG	3 cut(s)	328, 390, 1189
BveI	ACCTGC	1 cut(s)	161
Cac8I	GCNNGC	6 cut(s)	462, 641, 886, 939, 1142, 1205
CciI	TCATGA	1 cut(s)	1111
CfoI	GCGC	4 cut(s)	7, 462, 464, 1217
Cfr10I	RCCGGY	2 cut(s)	884, 1211
Cfr13I	GGNCC	3 cut(s)	699, 1084, 1164
Cfr9I	CCCGGG	1 cut(s)	701
Csp6I	GTAC	1 cut(s)	567
CviAII	CATG	6 cut(s)	349, 640, 709, 920, 1112, 1168
CviQI	GTAC	1 cut(s)	567
DdeI	CTNAG	5 cut(s)	320, 382, 423, 823, 983
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	2 cut(s)	621, 1152
DpnII	GATC	2 cut(s)	619, 1150
DriI	GACNNNNNGTC	1 cut(s)	274
EaeI	YGGCCR	1 cut(s)	406
Eam1104I	CTCTTC	2 cut(s)	450, 498
Eam1105I	GACNNNNNGTC	1 cut(s)	274
EarI	CTCTTC	2 cut(s)	450, 498
EciI	GGCGGA	1 cut(s)	777
Eco31I	GGTCTC	2 cut(s)	229, 994
Eco47I	GGWCC	2 cut(s)	1084, 1164
Eco57I	CTGAAG	1 cut(s)	162
Eco88I	CYCGRG	2 cut(s)	701, 1117
EcoNI	CCTNNNNNAGG	1 cut(s)	986
EcoRI	GAATTC	1 cut(s)	154
EcoRII	CCWGG	1 cut(s)	854
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
FaeI	CATG	6 cut(s)	352, 643, 712, 923, 1115, 1171
FalI	AAGNNNNNCTT	4 cut(s)	200, 232, 300, 332
FatI	CATG	6 cut(s)	348, 639, 708, 919, 1111, 1167
FauNDI	CATATG	1 cut(s)	248
FblI	GTMKAC	1 cut(s)	660
Fnu4HI	GCNGC	4 cut(s)	284, 393, 927, 1138
FokI	GGATG	2 cut(s)	349, 514
Fsp4HI	GCNGC	4 cut(s)	284, 393, 927, 1138
FspBI	CTAG	3 cut(s)	720, 786, 1023
GlaI	GCGC	4 cut(s)	6, 461, 463, 1216
GluI	GCNGC	4 cut(s)	284, 393, 927, 1138
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	4 cut(s)	283, 408, 484, 700
HapII	CCGG	6 cut(s)	101, 366, 702, 885, 1104, 1212
HhaI	GCGC	4 cut(s)	7, 462, 464, 1217
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	6 cut(s)	352, 643, 712, 923, 1115, 1171
Hin6I	GCGC	4 cut(s)	5, 460, 462, 1215
HinP1I	GCGC	4 cut(s)	5, 460, 462, 1215
HincII	GTYRAC	1 cut(s)	661
HindII	GTYRAC	1 cut(s)	661
HinfI	GANTC	7 cut(s)	122, 294, 371, 438, 488, 978, 1115
HpaII	CCGG	6 cut(s)	101, 366, 702, 885, 1104, 1212
Hpy166II	GTNNAC	4 cut(s)	254, 414, 569, 661
Hpy188I	TCNGA	4 cut(s)	12, 127, 517, 607
Hpy188III	TCNNGA	7 cut(s)	226, 291, 623, 680, 720, 1112, 1119
Hpy8I	GTNNAC	4 cut(s)	254, 414, 569, 661
Hpy99I	CGWCG	1 cut(s)	1067
HpyAV	CCTTC	8 cut(s)	194, 302, 306, 348, 596, 752, 958, 1155
HpyCH4III	ACNGT	4 cut(s)	418, 595, 715, 726
HpyCH4V	TGCA	5 cut(s)	170, 649, 929, 941, 1140
HpyF10VI	GCNNNNNNNGC	6 cut(s)	466, 856, 885, 890, 947, 1204
HpyF3I	CTNAG	5 cut(s)	320, 382, 423, 823, 983
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	6 cut(s)	352, 643, 712, 923, 1115, 1171
HspAI	GCGC	4 cut(s)	5, 460, 462, 1215
KasI	GGCGCC	1 cut(s)	4
KroI	GCCGGC	1 cut(s)	884
KroNI	GCCGGC	1 cut(s)	886
Kzo9I	GATC	2 cut(s)	619, 1150
LguI	GCTCTTC	1 cut(s)	450
LmnI	GCTCC	3 cut(s)	389, 554, 1195
Lsp1109I	GCAGC	3 cut(s)	379, 913, 1124
LweI	GCATC	2 cut(s)	371, 536
MaeI	CTAG	3 cut(s)	720, 786, 1023
MaeIII	GTNAC	2 cut(s)	427, 688
MalI	GATC	2 cut(s)	621, 1152
MboI	GATC	2 cut(s)	619, 1150
MhlI	GDGCHC	1 cut(s)	971
MlsI	TGGCCA	1 cut(s)	408
MluCI	AATT	5 cut(s)	71, 154, 518, 544, 654
MluNI	TGGCCA	1 cut(s)	408
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	288, 380, 1109
MmeI	TCCRAC	1 cut(s)	614
MnlI	CCTC	9 cut(s)	18, 100, 187, 190, 273, 485, 619, 916, 1164
Mox20I	TGGCCA	1 cut(s)	408
MroNI	GCCGGC	1 cut(s)	884
MroXI	GAANNNNTTC	1 cut(s)	96
MscI	TGGCCA	1 cut(s)	408
MseI	TTAA	5 cut(s)	207, 510, 728, 909, 1181
MslI	CAYNNNNRTG	3 cut(s)	578, 713, 1222
Msp20I	TGGCCA	1 cut(s)	408
MspI	CCGG	6 cut(s)	101, 366, 702, 885, 1104, 1212
MspR9I	CCNGG	4 cut(s)	367, 702, 703, 856
Mva1269I	GAATGC	1 cut(s)	950
MvaI	CCWGG	1 cut(s)	856
MvnI	CGCG	1 cut(s)	462
MwoI	GCNNNNNNNGC	6 cut(s)	466, 856, 885, 890, 947, 1204
NaeI	GCCGGC	1 cut(s)	886
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	3 cut(s)	367, 702, 703
NdeI	CATATG	1 cut(s)	248
NdeII	GATC	2 cut(s)	619, 1150
NgoMIV	GCCGGC	1 cut(s)	884
NlaIII	CATG	6 cut(s)	352, 643, 712, 923, 1115, 1171
NlaIV	GGNNCC	4 cut(s)	6, 99, 556, 1086
NmuCI	GTSAC	2 cut(s)	427, 688
NspI	RCATGY	1 cut(s)	643
NspV	TTCGAA	1 cut(s)	491
OliI	CACNNNNGTG	1 cut(s)	1222
PaeI	GCATGC	1 cut(s)	643
PagI	TCATGA	1 cut(s)	1111
PauI	GCGCGC	1 cut(s)	460
PciSI	GCTCTTC	1 cut(s)	450
PcsI	WCGNNNNNNNCGW	3 cut(s)	26, 35, 44
PctI	GAATGC	1 cut(s)	950
PdiI	GCCGGC	1 cut(s)	886
PdmI	GAANNNNTTC	1 cut(s)	96
PfeI	GAWTC	4 cut(s)	122, 438, 488, 978
PflFI	GACNNNGTC	1 cut(s)	715
PkrI	GCNGC	4 cut(s)	285, 394, 928, 1139
PleI	GAGTC	3 cut(s)	288, 379, 1109
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	288, 379, 1109
Psp6I	CCWGG	1 cut(s)	854
PspGI	CCWGG	1 cut(s)	854
PspN4I	GGNNCC	4 cut(s)	6, 99, 556, 1086
PspPI	GGNCC	3 cut(s)	699, 1084, 1164
PstI	CTGCAG	1 cut(s)	172
PsyI	GACNNNGTC	1 cut(s)	715
PteI	GCGCGC	1 cut(s)	460
RsaI	GTAC	1 cut(s)	568
RsaNI	GTAC	1 cut(s)	567
RseI	CAYNNNNRTG	3 cut(s)	578, 713, 1222
SalI	GTCGAC	1 cut(s)	659
SapI	GCTCTTC	1 cut(s)	450
SaqAI	TTAA	5 cut(s)	207, 510, 728, 909, 1181
SatI	GCNGC	4 cut(s)	284, 393, 927, 1138
Sau3AI	GATC	2 cut(s)	619, 1150
Sau96I	GGNCC	3 cut(s)	699, 1084, 1164
SbfI	CCTGCAGG	1 cut(s)	172
SchI	GAGTC	3 cut(s)	288, 380, 1109
ScrFI	CCNGG	4 cut(s)	367, 702, 703, 856
SdaI	CCTGCAGG	1 cut(s)	172
SduI	GDGCHC	1 cut(s)	971
SfaNI	GCATC	2 cut(s)	371, 536
SfcI	CTRYAG	2 cut(s)	168, 634
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	1 cut(s)	491
SinI	GGWCC	2 cut(s)	1084, 1164
SmaI	CCCGGG	1 cut(s)	703
SmiMI	CAYNNNNRTG	3 cut(s)	578, 713, 1222
SmlI	CTYRAG	2 cut(s)	375, 476
SmoI	CTYRAG	2 cut(s)	375, 476
SphI	GCATGC	1 cut(s)	643
Sse8387I	CCTGCAGG	1 cut(s)	172
Sse9I	AATT	5 cut(s)	71, 154, 518, 544, 654
SsiI	CCGC	2 cut(s)	284, 762
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	3 cut(s)	720, 786, 1023
StyD4I	CCNGG	4 cut(s)	365, 700, 701, 854
TaaI	ACNGT	4 cut(s)	418, 595, 715, 726
TasI	AATT	5 cut(s)	71, 154, 518, 544, 654
TauI	GCSGC	1 cut(s)	286
TfiI	GAWTC	4 cut(s)	122, 438, 488, 978
Tru1I	TTAA	5 cut(s)	207, 510, 728, 909, 1181
Tru9I	TTAA	5 cut(s)	207, 510, 728, 909, 1181
TscAI	CASTG	3 cut(s)	328, 390, 1196
TseFI	GTSAC	2 cut(s)	427, 688
TseI	GCWGC	3 cut(s)	392, 926, 1137
Tsp45I	GTSAC	2 cut(s)	427, 688
TspDTI	ATGAA	1 cut(s)	430
TspMI	CCCGGG	1 cut(s)	701
TspRI	CASTG	3 cut(s)	328, 390, 1196
Tth111I	GACNNNGTC	1 cut(s)	715
VpaK11BI	GGWCC	2 cut(s)	1084, 1164
XagI	CCTNNNNNAGG	1 cut(s)	986
XapI	RAATTY	3 cut(s)	71, 154, 518
XbaI	TCTAGA	1 cut(s)	719
XceI	RCATGY	1 cut(s)	643
XcmI	CCANNNNNNNNNTGG	1 cut(s)	355
XmaI	CCCGGG	1 cut(s)	701
XmiI	GTMKAC	1 cut(s)	660
XmnI	GAANNNNTTC	1 cut(s)	96
XspI	CTAG	3 cut(s)	720, 786, 1023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.