MD04G1065600.v1.1

iq-domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0010781
Physical Location & Seq
Reverse (-)
8782065 .. 8787149
5085 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1065600.v1.1.491

Sequence Viewer

Length: 1335 bp
ATGGGCAAAGCCTCCAAATGGTTCCGGAGCATCCTGGGCCTCAAAAAGCCCAACCCCGCCCACCAAACCACCACCTCCTCCTCCTCTCCCAAACCACCCACCAAAGATAAACGCCGCTGGAGCTTCGTCAAGTCCTACAGAGAAAAACACCACCAAAATGACGCCGCACCGCTCCACCACCGCGTGGACTCCTCCACCGACGCCGCCGACCCCAACAAACACGCAATCGCCGTGGCGGCCGCGACAGCCGCCGTGGCCGAAGCAGCAGTATCCGCTGCTCAAGCCGCCGCGGCGGTGGTCCGGCTCACTAGCAGCGGCCGCTGCGCCAGAAACCCCACGGTGCACGCTAGCGGGAACCGCGTTGGAATTCGCGAGGAAGAATTGGCCGCTGTGAAAATTCAAGCTGCCTTCCGGGGCTGTTTGGCAAGGAGAGCGTTGCGAGCGTTAAAGGGATTGGTGCGACTTCAGGCGTTGGTTAGAGGTCATATTGTGCGGAAGTTTTATGCTGACCGGTTGCAGCGGCTGCAAGCCATATTGCGAGCGCAGGCAAGAGCTCAAGCACGGCGGGCCCAGATTTCTGATCTCTCACACTCAAGGACCAAATCTTCTCAGTTTCACCAACCTGATCCAGCAACCCCTGAAAAATTTGAACATCCTATCCGATCAAGGAGCACAAAGCATGAGCAGTTCTCAACACTCCGGAAAAATAGCTCCAAGTCCAATGGAACTACTGATGATGAAAAGAATGACAGGGTCCTCGAAATCGATGCTGGGAAATCATACATTGCACCTAGACGGAGAAATCTTTTTCACTCTACTCATCTTGCTGTGGTCTCAGACCAATGCAGCCATAGCTTTACCACTTCAAAAGACTCCACAAGCCATCACACACTTCCCAGTCCATTGTCTTGTGAGTTCCAGTCTTTTAGCCCGTTGAAGCTCTCTCGAGAGGTTGAGGAAGACTCTTTCTGCACTGCCAACTGTAGTCCGCAGTTGTATTCTGCTTCATCACAGGGAGCTACTTCGAAGAGAAGCCCCTTCACTCCTACAAGGAGTGATGGCTCAAAAAGTTACTTAAGTGGCTATTCCGATTACCCAAATTACATGGCGTGCACTGAATCATCAAAGGCTAAGTTTAGGTCTCTTAGTGCTCCGAAGCAGAGGCCTCACTATGATAGGTCTAGCTCAACAAAGAGGTACTCCATTCACGGCTTTGGTGAGTCGCGATCAATTACACAACGGACATCTGCCTTGCACGCTAACTTTGCAAATAAAGCCTACCCGGGTTCTGGTCGCTTGGACAAGCTAGGGATGCCGGTGGGTTACAGGTACTGA

Protein Analysis

445

Amino Acids

49.03

Weight (kDa)

10.29

Isoelectric Point (pI)

60.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 329 - 403 9.6e-11 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010781)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23060
fragaria_vesca FvH4_5g01680 FvH4_5g01680 FvH4_5g01680
malus_domestica MD04G1065600.v1.1
prunus_persica Prupe.5G092600_v2.0.a1
pyrus_communis pycom04g05910 pycom06g07330
rosa_chinensis RchiOBHm_Chr7g0199041
rosa_laevigata RLG00000003820
rosa_multiflora Rmu_co8081240.1_g000001 Rmu_sc0006266.1_g000033 Rmu_sc0007328.1_g000001
rosa_roxburghii Rroxscaffold_3G00257190
rosa_rugosa Rorug07G0052200
rosa_samantha Rh7AG175400 Rh7BG178800 Rh7CG184600 Rh7DG178200
rosa_wichuraiana Rw7G015390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 184
AccBSI CCGCTC 1 cut(s) 172
AccII CGCG 6 cut(s) 183, 242, 290, 360, 372, 1225
AccIII TCCGGA 2 cut(s) 24, 699
AclWI GGATC 1 cut(s) 620
AcoI YGGCCR 4 cut(s) 237, 255, 316, 384
AcsI RAATTY 3 cut(s) 366, 396, 644
AcuI CTGAAG 1 cut(s) 449
AcyI GRCGYC 2 cut(s) 162, 201
AdeI CACNNNGTG 1 cut(s) 184
AfaI GTAC 2 cut(s) 1199, 1331
AfiI CCNNNNNNNGG 3 cut(s) 18, 184, 1289
AflII CTTAAG 1 cut(s) 1075
AgeI ACCGGT 1 cut(s) 510
AgsI TTSAA 4 cut(s) 401, 650, 867, 937
AjnI CCWGG 1 cut(s) 33
AloI GAACNNNNNNTCC 2 cut(s) 642, 674
AluBI AGCT 9 cut(s) 123, 404, 554, 711, 855, 940, 1019, 1185, 1306
AluI AGCT 9 cut(s) 123, 404, 554, 711, 855, 940, 1019, 1185, 1306
Alw21I GWGCWC 5 cut(s) 345, 556, 674, 1115, 1153
Alw26I GTCTC 2 cut(s) 838, 1146
Alw44I GTGCAC 2 cut(s) 341, 1111
AlwI GGATC 1 cut(s) 620
AlwNI CAGNNNCTG 2 cut(s) 523, 1332
Ama87I CYCGRG 2 cut(s) 945, 1282
Aor13HI TCCGGA 2 cut(s) 24, 699
AoxI GGCC 7 cut(s) 37, 237, 255, 316, 384, 567, 1163
ApaI GGGCCC 1 cut(s) 571
ApaLI GTGCAC 2 cut(s) 341, 1111
ApeKI GCWGC 8 cut(s) 263, 275, 312, 321, 404, 517, 523, 846
ApoI RAATTY 3 cut(s) 366, 396, 644
AsiGI ACCGGT 1 cut(s) 510
AspLEI GCGC 2 cut(s) 326, 544
AspS9I GGNCC 6 cut(s) 37, 298, 567, 568, 597, 754
AsuC2I CCSGG 3 cut(s) 413, 1283, 1284
AsuHPI GGTGA 2 cut(s) 608, 1229
AsuII TTCGAA 1 cut(s) 1025
AsuNHI GCTAGC 1 cut(s) 347
AvaI CYCGRG 2 cut(s) 945, 1282
AvaII GGWCC 3 cut(s) 298, 597, 754
BaeGI GKGCMC 3 cut(s) 345, 571, 1115
BanII GRGCYC 2 cut(s) 556, 571
BbsI GAAGAC 1 cut(s) 966
Bbv12I GWGCWC 5 cut(s) 345, 556, 674, 1115, 1153
BbvI GCAGC 8 cut(s) 262, 275, 308, 324, 391, 510, 529, 858
BccI CCATC 2 cut(s) 891, 1052
BceAI ACGGC 4 cut(s) 215, 236, 578, 1225
BcgI CGANNNNNNTGC 2 cut(s) 749, 783
BciT130I CCWGG 1 cut(s) 35
BciVI GTATCC 1 cut(s) 280
BcnI CCSGG 3 cut(s) 413, 1283, 1284
BcoDI GTCTC 2 cut(s) 838, 1146
BfaI CTAG 5 cut(s) 309, 348, 792, 1182, 1307
BfmI CTRYAG 2 cut(s) 136, 982
BfrI CTTAAG 1 cut(s) 1075
BfuI GTATCC 1 cut(s) 280
BglI GCCNNNNNGGC 3 cut(s) 236, 254, 290
Bme1390I CCNGG 4 cut(s) 35, 413, 1283, 1284
Bme18I GGWCC 3 cut(s) 298, 597, 754
BmeT110I CYCGRG 2 cut(s) 945, 1282
BmgT120I GGNCC 6 cut(s) 37, 298, 567, 568, 597, 754
BmiI GGNNCC 4 cut(s) 23, 356, 569, 755
BmrFI CCNGG 4 cut(s) 35, 413, 1283, 1284
BmrI ACTGGG 1 cut(s) 891
BmsI GCATC 3 cut(s) 39, 757, 1302
BmtI GCTAGC 1 cut(s) 351
BmuI ACTGGG 1 cut(s) 891
BpiI GAAGAC 1 cut(s) 966
BplI GAGNNNNNCTC 4 cut(s) 674, 706, 947, 979
BpmI CTGGAG 1 cut(s) 139
Bpu14I TTCGAA 1 cut(s) 1025
BpuEI CTTGAG 3 cut(s) 264, 540, 577
BpuMI CCSGG 3 cut(s) 413, 1283, 1284
Bsa29I ATCGAT 1 cut(s) 765
BsaHI GRCGYC 2 cut(s) 162, 201
BsaI GGTCTC 2 cut(s) 838, 1146
BsaJI CCNNGG 7 cut(s) 34, 231, 252, 288, 336, 412, 1282
BsaWI WCCGGW 3 cut(s) 24, 510, 699
Bsc4I CCNNNNNNNGG 3 cut(s) 18, 184, 1289
Bse118I RCCGGY 2 cut(s) 510, 1315
Bse1I ACTGG 2 cut(s) 897, 919
Bse3DI GCAATG 1 cut(s) 783
BseAI TCCGGA 2 cut(s) 24, 699
BseBI CCWGG 1 cut(s) 35
BseCI ATCGAT 1 cut(s) 765
BseDI CCNNGG 7 cut(s) 34, 231, 252, 288, 336, 412, 1282
BseGI GGATG 3 cut(s) 30, 652, 1317
BseLI CCNNNNNNNGG 3 cut(s) 18, 184, 1289
BseMI GCAATG 1 cut(s) 783
BseMII CTCAG 2 cut(s) 623, 849
BseNI ACTGG 2 cut(s) 897, 919
BseRI GAGGAG 4 cut(s) 67, 70, 73, 181
BseSI GKGCMC 3 cut(s) 345, 571, 1115
BseX3I CGGCCG 2 cut(s) 237, 316
BseXI GCAGC 8 cut(s) 262, 275, 308, 324, 391, 510, 529, 858
BseYI CCCAGC 1 cut(s) 770
BsgI GTGCAG 1 cut(s) 955
Bsh1236I CGCG 6 cut(s) 183, 242, 290, 360, 372, 1225
Bsh1285I CGRYCG 2 cut(s) 240, 319
BshFI GGCC 7 cut(s) 39, 239, 257, 318, 386, 569, 1165
BshTI ACCGGT 1 cut(s) 510
BshVI ATCGAT 1 cut(s) 765
BsiEI CGRYCG 2 cut(s) 240, 319
BsiHKAI GWGCWC 5 cut(s) 345, 556, 674, 1115, 1153
BsiHKCI CYCGRG 2 cut(s) 945, 1282
BsiSI CCGG 7 cut(s) 25, 301, 412, 511, 700, 1283, 1316
BslI CCNNNNNNNGG 3 cut(s) 18, 184, 1289
BsmAI GTCTC 2 cut(s) 838, 1146
BsnI GGCC 7 cut(s) 39, 239, 257, 318, 386, 569, 1165
Bso31I GGTCTC 2 cut(s) 838, 1146
BsoBI CYCGRG 2 cut(s) 945, 1282
Bsp119I TTCGAA 1 cut(s) 1025
Bsp120I GGGCCC 1 cut(s) 567
Bsp1286I GDGCHC 6 cut(s) 345, 556, 571, 674, 1115, 1153
Bsp13I TCCGGA 2 cut(s) 24, 699
Bsp143I GATC 4 cut(s) 580, 625, 662, 1226
Bsp68I TCGCGA 2 cut(s) 372, 1225
BspANI GGCC 7 cut(s) 39, 239, 257, 318, 386, 569, 1165
BspCNI CTCAG 2 cut(s) 622, 848
BspDI ATCGAT 1 cut(s) 765
BspEI TCCGGA 2 cut(s) 24, 699
BspFNI CGCG 6 cut(s) 183, 242, 290, 360, 372, 1225
BspLI GGNNCC 4 cut(s) 23, 356, 569, 755
BspOI GCTAGC 1 cut(s) 351
BspPI GGATC 1 cut(s) 620
BspT104I TTCGAA 1 cut(s) 1025
BspTI CTTAAG 1 cut(s) 1075
BspTNI GGTCTC 2 cut(s) 838, 1146
BsrBI CCGCTC 1 cut(s) 172
BsrDI GCAATG 1 cut(s) 783
BsrFI RCCGGY 2 cut(s) 510, 1315
BsrI ACTGG 2 cut(s) 897, 919
BssAI RCCGGY 2 cut(s) 510, 1315
BssECI CCNNGG 7 cut(s) 34, 231, 252, 288, 336, 412, 1282
BssMI GATC 4 cut(s) 580, 625, 662, 1226
BssNI GRCGYC 2 cut(s) 162, 201
Bst2UI CCWGG 1 cut(s) 35
Bst4CI ACNGT 2 cut(s) 340, 983
Bst6I CTCTTC 1 cut(s) 1022
BstACI GRCGYC 2 cut(s) 162, 201
BstAFI CTTAAG 1 cut(s) 1075
BstAPI GCANNNNNTGC 1 cut(s) 523
BstBI TTCGAA 1 cut(s) 1025
BstC8I GCNNGC 9 cut(s) 345, 349, 441, 528, 540, 546, 567, 1111, 1257
BstDEI CTNAG 4 cut(s) 609, 835, 1131, 1145
BstDSI CCRYGG 4 cut(s) 231, 252, 288, 336
BstF5I GGATG 3 cut(s) 30, 652, 1317
BstFNI CGCG 6 cut(s) 183, 242, 290, 360, 372, 1225
BstHHI GCGC 2 cut(s) 326, 544
BstKTI GATC 4 cut(s) 583, 628, 665, 1229
BstMAI GTCTC 2 cut(s) 838, 1146
BstMBI GATC 4 cut(s) 580, 625, 662, 1226
BstMCI CGRYCG 2 cut(s) 240, 319
BstNI CCWGG 1 cut(s) 35
BstSCI CCNGG 4 cut(s) 33, 411, 1281, 1282
BstSFI CTRYAG 2 cut(s) 136, 982
BstSLI GKGCMC 3 cut(s) 345, 571, 1115
BstUI CGCG 6 cut(s) 183, 242, 290, 360, 372, 1225
BstV1I GCAGC 8 cut(s) 262, 275, 308, 324, 391, 510, 529, 858
BstV2I GAAGAC 1 cut(s) 966
BstZI CGGCCG 2 cut(s) 237, 316
Bsu15I ATCGAT 1 cut(s) 765
BsuI GTATCC 1 cut(s) 280
BsuRI GGCC 7 cut(s) 39, 239, 257, 318, 386, 569, 1165
BsuTUI ATCGAT 1 cut(s) 765
BtgI CCRYGG 4 cut(s) 231, 252, 288, 336
BtsCI GGATG 3 cut(s) 30, 652, 1317
BtsI GCAGTG 1 cut(s) 972
BtsIMutI CAGTG 2 cut(s) 972, 1113
BtuMI TCGCGA 2 cut(s) 372, 1225
Cac8I GCNNGC 9 cut(s) 345, 349, 441, 528, 540, 546, 567, 1111, 1257
CaiI CAGNNNCTG 2 cut(s) 523, 1332
CciNI GCGGCCGC 2 cut(s) 237, 316
CfoI GCGC 2 cut(s) 326, 544
Cfr10I RCCGGY 2 cut(s) 510, 1315
Cfr13I GGNCC 6 cut(s) 37, 298, 567, 568, 597, 754
Cfr42I CCGCGG 1 cut(s) 291
Cfr9I CCCGGG 1 cut(s) 1282
ClaI ATCGAT 1 cut(s) 765
CseI GACGC 2 cut(s) 170, 209
Csp6I GTAC 2 cut(s) 1198, 1330
CspAI ACCGGT 1 cut(s) 510
CspCI CAANNNNNGTGG 2 cut(s) 213, 248
CviAII CATG 2 cut(s) 680, 1105
CviQI GTAC 2 cut(s) 1198, 1330
DdeI CTNAG 4 cut(s) 609, 835, 1131, 1145
DpnI GATC 4 cut(s) 582, 627, 664, 1228
DpnII GATC 4 cut(s) 580, 625, 662, 1226
DraIII CACNNNGTG 1 cut(s) 184
EaeI YGGCCR 4 cut(s) 237, 255, 316, 384
EagI CGGCCG 2 cut(s) 237, 316
Eam1104I CTCTTC 1 cut(s) 1022
EarI CTCTTC 1 cut(s) 1022
Ecl136II GAGCTC 1 cut(s) 554
EclXI CGGCCG 2 cut(s) 237, 316
Eco147I AGGCCT 1 cut(s) 1165
Eco24I GRGCYC 2 cut(s) 556, 571
Eco31I GGTCTC 2 cut(s) 838, 1146
Eco47I GGWCC 3 cut(s) 298, 597, 754
Eco52I CGGCCG 2 cut(s) 237, 316
Eco53kI GAGCTC 1 cut(s) 554
Eco57I CTGAAG 1 cut(s) 449
Eco88I CYCGRG 2 cut(s) 945, 1282
EcoICRI GAGCTC 1 cut(s) 554
EcoO109I RGGNCCY 1 cut(s) 754
EcoRI GAATTC 1 cut(s) 366
EcoRII CCWGG 1 cut(s) 33
EcoT38I GRGCYC 2 cut(s) 556, 571
FaeI CATG 2 cut(s) 683, 1108
FaiI YATR 8 cut(s) 486, 504, 533, 681, 781, 852, 1106, 1173
FatI CATG 2 cut(s) 679, 1104
FauI CCCGC 3 cut(s) 64, 344, 558
FokI GGATG 3 cut(s) 17, 639, 1324
FriOI GRGCYC 2 cut(s) 556, 571
FspBI CTAG 5 cut(s) 309, 348, 792, 1182, 1307
GlaI GCGC 2 cut(s) 325, 543
GsaI CCCAGC 1 cut(s) 774
GsuI CTGGAG 1 cut(s) 139
HaeIII GGCC 7 cut(s) 39, 239, 257, 318, 386, 569, 1165
HapII CCGG 7 cut(s) 25, 301, 412, 511, 700, 1283, 1316
HgaI GACGC 2 cut(s) 170, 209
HhaI GCGC 2 cut(s) 326, 544
Hin1I GRCGYC 2 cut(s) 162, 201
Hin1II CATG 2 cut(s) 683, 1108
Hin6I GCGC 2 cut(s) 324, 542
HinP1I GCGC 2 cut(s) 324, 542
HinfI GANTC 5 cut(s) 188, 872, 962, 1118, 1220
HpaII CCGG 7 cut(s) 25, 301, 412, 511, 700, 1283, 1316
HphI GGTGA 2 cut(s) 608, 1229
Hpy166II GTNNAC 3 cut(s) 187, 343, 1113
Hpy188I TCNGA 5 cut(s) 580, 662, 838, 1090, 1155
Hpy188III TCNNGA 6 cut(s) 25, 371, 700, 945, 947, 1224
Hpy8I GTNNAC 3 cut(s) 187, 343, 1113
Hpy99I CGWCG 1 cut(s) 203
HpyAV CCTTC 2 cut(s) 418, 1048
HpyCH4III ACNGT 2 cut(s) 340, 983
HpyCH4V TGCA 9 cut(s) 343, 517, 526, 788, 846, 972, 1113, 1255, 1268
HpyF3I CTNAG 4 cut(s) 609, 835, 1131, 1145
Hsp92I GRCGYC 2 cut(s) 162, 201
Hsp92II CATG 2 cut(s) 683, 1108
HspAI GCGC 2 cut(s) 324, 542
Kpn2I TCCGGA 2 cut(s) 24, 699
KspI CCGCGG 1 cut(s) 291
Kzo9I GATC 4 cut(s) 580, 625, 662, 1226
LmnI GCTCC 7 cut(s) 27, 120, 177, 669, 716, 1016, 1156
Lsp1109I GCAGC 8 cut(s) 262, 275, 308, 324, 391, 510, 529, 858
LweI GCATC 3 cut(s) 39, 757, 1302
MaeI CTAG 5 cut(s) 309, 348, 792, 1182, 1307
MaeIII GTNAC 2 cut(s) 1070, 1322
MalI GATC 4 cut(s) 582, 627, 664, 1228
MbiI CCGCTC 1 cut(s) 172
MboI GATC 4 cut(s) 580, 625, 662, 1226
MboII GAAGA 4 cut(s) 389, 597, 971, 1039
MhlI GDGCHC 6 cut(s) 345, 556, 571, 674, 1115, 1153
MluCI AATT 6 cut(s) 366, 380, 396, 644, 1099, 1230
MlyI GAGTC 4 cut(s) 182, 866, 956, 1229
MmeI TCCRAC 1 cut(s) 343
MroI TCCGGA 2 cut(s) 24, 699
MseI TTAA 2 cut(s) 446, 1076
MslI CAYNNNNRTG 1 cut(s) 156
MspA1I CMGCKG 7 cut(s) 117, 275, 290, 315, 321, 389, 520
MspCI CTTAAG 1 cut(s) 1075
MspI CCGG 7 cut(s) 25, 301, 412, 511, 700, 1283, 1316
MspR9I CCNGG 4 cut(s) 35, 413, 1283, 1284
MvaI CCWGG 1 cut(s) 35
MvnI CGCG 6 cut(s) 183, 242, 290, 360, 372, 1225
NciI CCSGG 3 cut(s) 413, 1283, 1284
NdeII GATC 4 cut(s) 580, 625, 662, 1226
NheI GCTAGC 1 cut(s) 347
NlaIII CATG 2 cut(s) 683, 1108
NlaIV GGNNCC 4 cut(s) 23, 356, 569, 755
NotI GCGGCCGC 2 cut(s) 237, 316
NruI TCGCGA 2 cut(s) 372, 1225
NspV TTCGAA 1 cut(s) 1025
PaeR7I CTCGAG 1 cut(s) 945
PceI AGGCCT 1 cut(s) 1165
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PfeI GAWTC 1 cut(s) 1118
PflFI GACNNNGTC 1 cut(s) 752
PflMI CCANNNNNTGG 1 cut(s) 184
PinAI ACCGGT 1 cut(s) 510
PleI GAGTC 4 cut(s) 182, 866, 956, 1228
PpsI GAGTC 4 cut(s) 182, 866, 956, 1228
PpuMI RGGWCCY 1 cut(s) 754
Psp124BI GAGCTC 1 cut(s) 556
Psp5II RGGWCCY 1 cut(s) 754
Psp6I CCWGG 1 cut(s) 33
PspFI CCCAGC 1 cut(s) 770
PspGI CCWGG 1 cut(s) 33
PspN4I GGNNCC 4 cut(s) 23, 356, 569, 755
PspOMI GGGCCC 1 cut(s) 567
PspPI GGNCC 6 cut(s) 37, 298, 567, 568, 597, 754
PspPPI RGGWCCY 1 cut(s) 754
PstNI CAGNNNCTG 2 cut(s) 523, 1332
PsyI GACNNNGTC 1 cut(s) 752
RruI TCGCGA 2 cut(s) 372, 1225
RsaI GTAC 2 cut(s) 1199, 1331
RsaNI GTAC 2 cut(s) 1198, 1330
RseI CAYNNNNRTG 1 cut(s) 156
SacI GAGCTC 1 cut(s) 556
SacII CCGCGG 1 cut(s) 291
SaqAI TTAA 2 cut(s) 446, 1076
Sau3AI GATC 4 cut(s) 580, 625, 662, 1226
Sau96I GGNCC 6 cut(s) 37, 298, 567, 568, 597, 754
SchI GAGTC 4 cut(s) 182, 866, 956, 1229
ScrFI CCNGG 4 cut(s) 35, 413, 1283, 1284
SduI GDGCHC 6 cut(s) 345, 556, 571, 674, 1115, 1153
SfaNI GCATC 3 cut(s) 39, 757, 1302
SfcI CTRYAG 2 cut(s) 136, 982
Sfr274I CTCGAG 1 cut(s) 945
Sfr303I CCGCGG 1 cut(s) 291
SfuI TTCGAA 1 cut(s) 1025
SgrBI CCGCGG 1 cut(s) 291
SinI GGWCC 3 cut(s) 298, 597, 754
SlaI CTCGAG 1 cut(s) 945
SmaI CCCGGG 1 cut(s) 1284
SmiMI CAYNNNNRTG 1 cut(s) 156
SmlI CTYRAG 5 cut(s) 279, 555, 592, 945, 1075
SmoI CTYRAG 5 cut(s) 279, 555, 592, 945, 1075
Sse9I AATT 6 cut(s) 366, 380, 396, 644, 1099, 1230
SseBI AGGCCT 1 cut(s) 1165
SspMI CTAG 5 cut(s) 309, 348, 792, 1182, 1307
SstI GAGCTC 1 cut(s) 556
StuI AGGCCT 1 cut(s) 1165
StyD4I CCNGG 4 cut(s) 33, 411, 1281, 1282
TaaI ACNGT 2 cut(s) 340, 983
TaqI TCGA 4 cut(s) 759, 765, 946, 1025
TasI AATT 6 cut(s) 366, 380, 396, 644, 1099, 1230
TfiI GAWTC 1 cut(s) 1118
Tru1I TTAA 2 cut(s) 446, 1076
Tru9I TTAA 2 cut(s) 446, 1076
TscAI CASTG 2 cut(s) 979, 1120
TseI GCWGC 8 cut(s) 263, 275, 312, 321, 404, 517, 523, 846
TspDTI ATGAA 2 cut(s) 753, 996
TspGWI ACGGA 2 cut(s) 811, 1255
TspMI CCCGGG 1 cut(s) 1282
TspRI CASTG 2 cut(s) 979, 1120
Tth111I GACNNNGTC 1 cut(s) 752
Van91I CCANNNNNTGG 1 cut(s) 184
Vha464I CTTAAG 1 cut(s) 1075
VneI GTGCAC 2 cut(s) 341, 1111
VpaK11BI GGWCC 3 cut(s) 298, 597, 754
XapI RAATTY 3 cut(s) 366, 396, 644
XhoI CTCGAG 1 cut(s) 945
XmaI CCCGGG 1 cut(s) 1282
XspI CTAG 5 cut(s) 309, 348, 792, 1182, 1307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.