Rw7G015390

iq-domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0010781
Physical Location & Seq
Reverse (-)
15476397 .. 15480397
4001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G015390.1

Sequence Viewer

Length: 1422 bp
ATGGGCAAAGCTTCAAGATGGTTCCGCAGCGTTCTCGGCCTCAAAAAGTCCCACAACAACTCCTCACCTTGTCCCAAACCGCCATCCACCAAGCGCAGATGGATCTTTGTCAAGTCCTACAGAGAAAAAGACCACCCACACAATCACAACCACCACCAAACCGACCCCGCTGACGAGTCCTCCTCCGCTAACGACGTCGCTGATCCGAACAAGCATGCCATAGCCGTGGCGGCCGCGACAGCTGCCGTGGCCGAGGCCGCTGTTGCCGCCGCCCAAGCTGCCGCGGCCGTCGTCCGCCTCACCAGCAGCGGACGGTGTCCCAACAACAACAACAACCCAGCGGCGTACGTTAGCGGTGGCGGAGGAGGAAGCGTTGGGATTCGCGAGGAGTTGGCAGCCGTGAAAATCCAAGCGGCGTTCCGAGGCTGTTTGGCAAGGAGAGCATTGCGTGCATTAAAAGGATTGGTGAGGCTTCAAGCTCTGGTTAGAGGTCATATTGAGAGGAAGAAGTGGGCTAAGCGGTACCAGCGGTTTCAAGCAATATTGCGAGCGCAGGCCAGAGCTCGAGCAGGGCGGACCCAGATCTCAGAGTTCTCACATTCACATTCAAGTTCCCAATCTTCTCAGATTCACCAACCTGGTCCTGCAACCCCGGAAAAATTTGAACATGGCCTTCGATCCAGGAGTACAAAACATGAACATTCATCAATACTTGGGAGAAATAGCTCAAGATCAAATGGTAGGATTATTGGTGATCATGACAGAGCTCACTCGGAACGATCATGGGAGCAACCAGGGTCTGCAGTGAAGAATGGCACTCCTGAGGATGAGAAGAACGACAGGGTCCTCGAAATCGATACTGGGAAACCCCATATTGCAGCTAAACGTAGAAACCTCTTCCACTCTACTCATCTCGCTTCAGACCAATACAGCCATAGCTTTACTACATCAAAGGACTCAACAACTCATCAGACACTTCCAAGTCCGTCTTCTTGTGAAGTCCAATCGTTAACCCCATTGAAATTCTCTAGAGAGCTGGAGGAAGACGCATTCTGCACAGCTAACAATAGCCCACAGTTTTATTCTGCTACTTCTTCAAGGGGTGGTAATTCAAAGAAAAGTCCTTTCACTCCCACAAAGAGCGATGGCTCGAAAAGTTACCTAAGTGGGTACTCAGATTACCCGAACTACATGGCATGCACTCAATCTTCAAAGGCTAAGCTGAGGTCACTTAGTGCTCCGAAGCAGAGGCCTCAGTATGAGAGGTCTAGTTCAGCAAAGAGGTACTCTGTTCATGGCTTTGGCGAATCAAGATCAAATGCACAAAGGAGTTCAGCCTTGCATTCAAACTTCACAAATAAAGCCTACCCAGGATCTGGTCGCTTGGACAAGCTTGGCATGCCTGTAGGTTACAGATACTAA

Protein Analysis

473

Amino Acids

51.79

Weight (kDa)

10.2

Isoelectric Point (pI)

63.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 357 - 442 2.9e-09 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010781)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23060
fragaria_vesca FvH4_5g01680 FvH4_5g01680 FvH4_5g01680
malus_domestica MD04G1065600.v1.1
prunus_persica Prupe.5G092600_v2.0.a1
pyrus_communis pycom04g05910 pycom06g07330
rosa_chinensis RchiOBHm_Chr7g0199041
rosa_laevigata RLG00000003820
rosa_multiflora Rmu_co8081240.1_g000001 Rmu_sc0006266.1_g000033 Rmu_sc0007328.1_g000001
rosa_roxburghii Rroxscaffold_3G00257190
rosa_rugosa Rorug07G0052200
rosa_samantha Rh7AG175400 Rh7BG178800 Rh7CG184600 Rh7DG178200
rosa_wichuraiana Rw7G015390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 198
Acc65I GGTACC 1 cut(s) 522
AccB1I GGYRCC 1 cut(s) 522
AccB7I CCANNNNNTGG 1 cut(s) 1376
AccII CGCG 3 cut(s) 236, 284, 384
AclWI GGATC 4 cut(s) 110, 197, 672, 1381
AcoI YGGCCR 3 cut(s) 231, 249, 285
AcsI RAATTY 2 cut(s) 659, 1022
AcuI CTGAAG 1 cut(s) 903
AcyI GRCGYC 1 cut(s) 195
AdeI CACNNNGTG 1 cut(s) 1235
AfaI GTAC 5 cut(s) 347, 524, 688, 1172, 1286
AfiI CCNNNNNNNGG 1 cut(s) 1376
AjnI CCWGG 4 cut(s) 637, 680, 793, 1369
AjuI GAANNNNNNNTTGG 2 cut(s) 973, 1005
Alw21I GWGCWC 3 cut(s) 565, 769, 1240
AlwI GGATC 4 cut(s) 110, 197, 672, 1381
AlwNI CAGNNNCTG 2 cut(s) 800, 1376
Ama87I CYCGRG 1 cut(s) 564
AoxI GGCC 8 cut(s) 37, 231, 249, 255, 285, 555, 670, 1250
ApeKI GCWGC 6 cut(s) 27, 242, 278, 306, 395, 878
ApoI RAATTY 2 cut(s) 659, 1022
Asp718I GGTACC 1 cut(s) 522
AspLEI GCGC 2 cut(s) 96, 553
AspS9I GGNCC 3 cut(s) 576, 641, 844
AsuC2I CCSGG 1 cut(s) 653
AsuHPI GGTGA 5 cut(s) 57, 292, 478, 623, 764
AvaI CYCGRG 1 cut(s) 564
AvaII GGWCC 3 cut(s) 576, 641, 844
AxyI CCTNAGG 1 cut(s) 822
BanI GGYRCC 1 cut(s) 522
BanII GRGCYC 2 cut(s) 565, 769
BbsI GAAGAC 2 cut(s) 981, 1050
Bbv12I GWGCWC 3 cut(s) 565, 769, 1240
BbvCI CCTCAGC 1 cut(s) 1223
BbvI GCAGC 6 cut(s) 39, 229, 265, 318, 407, 890
BccI CCATC 4 cut(s) 12, 91, 93, 1139
BceAI ACGGC 4 cut(s) 209, 230, 272, 383
BcgI CGANNNNNNTGC 2 cut(s) 16, 50
BciT130I CCWGG 4 cut(s) 639, 682, 795, 1371
BclI TGATCA 1 cut(s) 754
BcnI CCSGG 1 cut(s) 653
BfaI CTAG 2 cut(s) 1029, 1269
BfmI CTRYAG 3 cut(s) 118, 801, 1404
BglI GCCNNNNNGGC 1 cut(s) 230
BglII AGATCT 1 cut(s) 582
BlpI GCTNAGC 2 cut(s) 516, 1218
Bme1390I CCNGG 5 cut(s) 639, 653, 682, 795, 1371
Bme18I GGWCC 3 cut(s) 576, 641, 844
BmeT110I CYCGRG 1 cut(s) 564
BmgT120I GGNCC 3 cut(s) 576, 641, 844
BmiI GGNNCC 4 cut(s) 23, 524, 578, 845
BmrFI CCNGG 5 cut(s) 639, 653, 682, 795, 1371
BmrI ACTGGG 1 cut(s) 870
BmuI ACTGGG 1 cut(s) 870
BpiI GAAGAC 2 cut(s) 981, 1050
BplI GAGNNNNNCTC 2 cut(s) 167, 199
BpmI CTGGAG 1 cut(s) 1058
Bpu10I CCTNAGC 1 cut(s) 1223
Bpu1102I GCTNAGC 2 cut(s) 516, 1218
BpuEI CTTGAG 1 cut(s) 712
BpuMI CCSGG 1 cut(s) 653
Bsa29I ATCGAT 1 cut(s) 855
BsaHI GRCGYC 1 cut(s) 195
BsaJI CCNNGG 8 cut(s) 225, 246, 252, 282, 421, 651, 794, 1369
BsaXI ACNNNNNCTCC 6 cut(s) 44, 74, 164, 194, 357, 387
Bsc4I CCNNNNNNNGG 1 cut(s) 1376
Bse1I ACTGG 1 cut(s) 865
Bse21I CCTNAGG 1 cut(s) 822
Bse3DI GCAATG 1 cut(s) 443
BseBI CCWGG 4 cut(s) 639, 682, 795, 1371
BseCI ATCGAT 1 cut(s) 855
BseDI CCNNGG 8 cut(s) 225, 246, 252, 282, 421, 651, 794, 1369
BseGI GGATG 2 cut(s) 83, 832
BseLI CCNNNNNNNGG 1 cut(s) 1376
BseMI GCAATG 1 cut(s) 443
BseMII CTCAG 6 cut(s) 600, 638, 813, 1188, 1214, 1268
BseNI ACTGG 1 cut(s) 865
BseRI GAGGAG 4 cut(s) 52, 172, 378, 401
BseX3I CGGCCG 2 cut(s) 231, 285
BseXI GCAGC 6 cut(s) 39, 229, 265, 318, 407, 890
BseYI CCCAGC 1 cut(s) 337
BsgI GTGCAG 1 cut(s) 1039
Bsh1236I CGCG 3 cut(s) 236, 284, 384
Bsh1285I CGRYCG 2 cut(s) 234, 288
BshFI GGCC 8 cut(s) 39, 233, 251, 257, 287, 557, 672, 1252
BshNI GGYRCC 1 cut(s) 522
BshVI ATCGAT 1 cut(s) 855
BsiEI CGRYCG 2 cut(s) 234, 288
BsiHKAI GWGCWC 3 cut(s) 565, 769, 1240
BsiHKCI CYCGRG 1 cut(s) 564
BsiSI CCGG 1 cut(s) 653
BsiWI CGTACG 1 cut(s) 345
BslFI GGGAC 3 cut(s) 34, 57, 303
BslI CCNNNNNNNGG 1 cut(s) 1376
BsmFI GGGAC 3 cut(s) 34, 57, 303
BsmI GAATGC 2 cut(s) 1049, 1342
BsnI GGCC 8 cut(s) 39, 233, 251, 257, 287, 557, 672, 1252
BsoBI CYCGRG 1 cut(s) 564
Bsp1286I GDGCHC 3 cut(s) 565, 769, 1240
Bsp143I GATC 9 cut(s) 102, 202, 582, 677, 731, 754, 779, 1313, 1373
Bsp1720I GCTNAGC 2 cut(s) 516, 1218
Bsp68I TCGCGA 1 cut(s) 384
BspANI GGCC 8 cut(s) 39, 233, 251, 257, 287, 557, 672, 1252
BspCNI CTCAG 6 cut(s) 599, 637, 814, 1187, 1215, 1267
BspDI ATCGAT 1 cut(s) 855
BspFNI CGCG 3 cut(s) 236, 284, 384
BspHI TCATGA 1 cut(s) 757
BspLI GGNNCC 4 cut(s) 23, 524, 578, 845
BspMAI CTGCAG 1 cut(s) 805
BspPI GGATC 4 cut(s) 110, 197, 672, 1381
BspT107I GGYRCC 1 cut(s) 522
BsrDI GCAATG 1 cut(s) 443
BsrI ACTGG 1 cut(s) 865
BssECI CCNNGG 8 cut(s) 225, 246, 252, 282, 421, 651, 794, 1369
BssMI GATC 9 cut(s) 102, 202, 582, 677, 731, 754, 779, 1313, 1373
BssNI GRCGYC 1 cut(s) 195
Bst2UI CCWGG 4 cut(s) 639, 682, 795, 1371
Bst4CI ACNGT 2 cut(s) 315, 1077
Bst6I CTCTTC 1 cut(s) 902
BstACI GRCGYC 1 cut(s) 195
BstAPI GCANNNNNTGC 1 cut(s) 449
BstC8I GCNNGC 6 cut(s) 216, 450, 549, 555, 1198, 1400
BstDSI CCRYGG 3 cut(s) 225, 246, 282
BstF5I GGATG 2 cut(s) 83, 832
BstFNI CGCG 3 cut(s) 236, 284, 384
BstHHI GCGC 2 cut(s) 96, 553
BstKTI GATC 9 cut(s) 105, 205, 585, 680, 734, 757, 782, 1316, 1376
BstMBI GATC 9 cut(s) 102, 202, 582, 677, 731, 754, 779, 1313, 1373
BstMCI CGRYCG 2 cut(s) 234, 288
BstNI CCWGG 4 cut(s) 639, 682, 795, 1371
BstNSI RCATGY 3 cut(s) 218, 1200, 1402
BstSCI CCNGG 5 cut(s) 637, 651, 680, 793, 1369
BstSFI CTRYAG 3 cut(s) 118, 801, 1404
BstUI CGCG 3 cut(s) 236, 284, 384
BstV1I GCAGC 6 cut(s) 39, 229, 265, 318, 407, 890
BstV2I GAAGAC 2 cut(s) 981, 1050
BstX2I RGATCY 3 cut(s) 102, 582, 1373
BstXI CCANNNNNNTGG 1 cut(s) 226
BstYI RGATCY 3 cut(s) 102, 582, 1373
BstZI CGGCCG 2 cut(s) 231, 285
Bsu15I ATCGAT 1 cut(s) 855
Bsu36I CCTNAGG 1 cut(s) 822
BsuRI GGCC 8 cut(s) 39, 233, 251, 257, 287, 557, 672, 1252
BsuTUI ATCGAT 1 cut(s) 855
BtgI CCRYGG 3 cut(s) 225, 246, 282
BtgZI GCGATG 1 cut(s) 1158
BtsCI GGATG 2 cut(s) 83, 832
BtsI GCAGTG 1 cut(s) 810
BtsIMutI CAGTG 1 cut(s) 810
BtuMI TCGCGA 1 cut(s) 384
Cac8I GCNNGC 6 cut(s) 216, 450, 549, 555, 1198, 1400
CaiI CAGNNNCTG 2 cut(s) 800, 1376
CciI TCATGA 1 cut(s) 757
CciNI GCGGCCGC 1 cut(s) 231
CfoI GCGC 2 cut(s) 96, 553
Cfr13I GGNCC 3 cut(s) 576, 641, 844
Cfr42I CCGCGG 1 cut(s) 285
ClaI ATCGAT 1 cut(s) 855
CseI GACGC 1 cut(s) 1055
CsiI ACCWGGT 1 cut(s) 637
Csp6I GTAC 5 cut(s) 346, 523, 687, 1171, 1285
CviAII CATG 9 cut(s) 215, 668, 695, 758, 783, 1192, 1197, 1295, 1399
CviQI GTAC 5 cut(s) 346, 523, 687, 1171, 1285
DpnI GATC 9 cut(s) 104, 204, 584, 679, 733, 756, 781, 1315, 1375
DpnII GATC 9 cut(s) 102, 202, 582, 677, 731, 754, 779, 1313, 1373
DraIII CACNNNGTG 1 cut(s) 1235
EaeI YGGCCR 3 cut(s) 231, 249, 285
EagI CGGCCG 2 cut(s) 231, 285
Eam1104I CTCTTC 1 cut(s) 902
EarI CTCTTC 1 cut(s) 902
EciI GGCGGA 3 cut(s) 284, 375, 589
Ecl136II GAGCTC 2 cut(s) 563, 767
EclXI CGGCCG 2 cut(s) 231, 285
Eco147I AGGCCT 1 cut(s) 1252
Eco24I GRGCYC 2 cut(s) 565, 769
Eco47I GGWCC 3 cut(s) 576, 641, 844
Eco52I CGGCCG 2 cut(s) 231, 285
Eco53kI GAGCTC 2 cut(s) 563, 767
Eco57I CTGAAG 1 cut(s) 903
Eco81I CCTNAGG 1 cut(s) 822
Eco88I CYCGRG 1 cut(s) 564
EcoICRI GAGCTC 2 cut(s) 563, 767
EcoO109I RGGNCCY 1 cut(s) 844
EcoRII CCWGG 4 cut(s) 637, 680, 793, 1369
EcoT38I GRGCYC 2 cut(s) 565, 769
FaeI CATG 9 cut(s) 218, 671, 698, 761, 786, 1195, 1200, 1298, 1402
FalI AAGNNNNNCTT 2 cut(s) 973, 1005
FaqI GGGAC 3 cut(s) 34, 57, 303
FatI CATG 9 cut(s) 214, 667, 694, 757, 782, 1191, 1196, 1294, 1398
FauI CCCGC 1 cut(s) 175
FbaI TGATCA 1 cut(s) 754
FokI GGATG 2 cut(s) 70, 839
FriOI GRGCYC 2 cut(s) 565, 769
FspBI CTAG 2 cut(s) 1029, 1269
GlaI GCGC 2 cut(s) 95, 552
GsaI CCCAGC 1 cut(s) 341
GsuI CTGGAG 1 cut(s) 1058
HaeIII GGCC 8 cut(s) 39, 233, 251, 257, 287, 557, 672, 1252
HapII CCGG 1 cut(s) 653
HgaI GACGC 1 cut(s) 1055
HhaI GCGC 2 cut(s) 96, 553
Hin1I GRCGYC 1 cut(s) 195
Hin1II CATG 9 cut(s) 218, 671, 698, 761, 786, 1195, 1200, 1298, 1402
Hin6I GCGC 2 cut(s) 94, 551
HinP1I GCGC 2 cut(s) 94, 551
HincII GTYRAC 1 cut(s) 1011
HindII GTYRAC 1 cut(s) 1011
HindIII AAGCTT 2 cut(s) 9, 1391
HinfI GANTC 5 cut(s) 176, 379, 628, 956, 1307
HpaI GTTAAC 1 cut(s) 1011
HpaII CCGG 1 cut(s) 653
HphI GGTGA 5 cut(s) 57, 292, 478, 623, 764
Hpy166II GTNNAC 1 cut(s) 1011
Hpy188I TCNGA 9 cut(s) 207, 422, 589, 627, 775, 922, 972, 1177, 1242
Hpy188III TCNNGA 7 cut(s) 15, 383, 729, 758, 821, 1029, 1311
Hpy8I GTNNAC 1 cut(s) 1011
Hpy99I CGWCG 3 cut(s) 197, 200, 293
HpyAV CCTTC 1 cut(s) 683
HpyCH4III ACNGT 2 cut(s) 315, 1077
HpyCH4IV ACGT 3 cut(s) 195, 348, 886
HpyCH4V TGCA 8 cut(s) 452, 647, 803, 878, 1056, 1200, 1322, 1342
HpySE526I ACGT 3 cut(s) 195, 348, 886
Hsp92I GRCGYC 1 cut(s) 195
Hsp92II CATG 9 cut(s) 218, 671, 698, 761, 786, 1195, 1200, 1298, 1402
HspAI GCGC 2 cut(s) 94, 551
KpnI GGTACC 1 cut(s) 526
Ksp22I TGATCA 1 cut(s) 754
KspAI GTTAAC 1 cut(s) 1011
KspI CCGCGG 1 cut(s) 285
Kzo9I GATC 9 cut(s) 102, 202, 582, 677, 731, 754, 779, 1313, 1373
LmnI GCTCC 2 cut(s) 787, 1243
Lsp1109I GCAGC 6 cut(s) 39, 229, 265, 318, 407, 890
MabI ACCWGGT 1 cut(s) 637
MaeI CTAG 2 cut(s) 1029, 1269
MaeII ACGT 3 cut(s) 195, 348, 886
MaeIII GTNAC 3 cut(s) 1157, 1227, 1409
MalI GATC 9 cut(s) 104, 204, 584, 679, 733, 756, 781, 1315, 1375
MboI GATC 9 cut(s) 102, 202, 582, 677, 731, 754, 779, 1313, 1373
MboII GAAGA 9 cut(s) 517, 612, 820, 844, 889, 981, 1055, 1086, 1200
MflI RGATCY 3 cut(s) 102, 582, 1373
MhlI GDGCHC 3 cut(s) 565, 769, 1240
MluCI AATT 3 cut(s) 659, 1022, 1108
MlyI GAGTC 2 cut(s) 185, 950
MseI TTAA 2 cut(s) 455, 1010
MslI CAYNNNNRTG 1 cut(s) 224
MspA1I CMGCKG 7 cut(s) 170, 242, 260, 284, 309, 341, 529
MspI CCGG 1 cut(s) 653
MspR9I CCNGG 5 cut(s) 639, 653, 682, 795, 1371
Mva1269I GAATGC 2 cut(s) 1049, 1342
MvaI CCWGG 4 cut(s) 639, 682, 795, 1371
MvnI CGCG 3 cut(s) 236, 284, 384
NciI CCSGG 1 cut(s) 653
NdeII GATC 9 cut(s) 102, 202, 582, 677, 731, 754, 779, 1313, 1373
NlaIII CATG 9 cut(s) 218, 671, 698, 761, 786, 1195, 1200, 1298, 1402
NlaIV GGNNCC 4 cut(s) 23, 524, 578, 845
NmeAIII GCCGAG 2 cut(s) 15, 277
NmuCI GTSAC 1 cut(s) 1227
NotI GCGGCCGC 1 cut(s) 231
NruI TCGCGA 1 cut(s) 384
NspI RCATGY 3 cut(s) 218, 1200, 1402
PaeI GCATGC 3 cut(s) 218, 1200, 1402
PaeR7I CTCGAG 1 cut(s) 564
PagI TCATGA 1 cut(s) 757
PceI AGGCCT 1 cut(s) 1252
PctI GAATGC 2 cut(s) 1049, 1342
PfeI GAWTC 3 cut(s) 379, 628, 1307
Pfl23II CGTACG 1 cut(s) 345
PflFI GACNNNGTC 2 cut(s) 315, 842
PflMI CCANNNNNTGG 1 cut(s) 1376
PfoI TCCNGGA 1 cut(s) 680
PleI GAGTC 2 cut(s) 184, 950
PpsI GAGTC 2 cut(s) 184, 950
PpuMI RGGWCCY 1 cut(s) 844
Psp124BI GAGCTC 2 cut(s) 565, 769
Psp5II RGGWCCY 1 cut(s) 844
Psp6I CCWGG 4 cut(s) 637, 680, 793, 1369
PspFI CCCAGC 1 cut(s) 337
PspGI CCWGG 4 cut(s) 637, 680, 793, 1369
PspLI CGTACG 1 cut(s) 345
PspN4I GGNNCC 4 cut(s) 23, 524, 578, 845
PspPI GGNCC 3 cut(s) 576, 641, 844
PspPPI RGGWCCY 1 cut(s) 844
PspXI VCTCGAGB 1 cut(s) 564
PstI CTGCAG 1 cut(s) 805
PstNI CAGNNNCTG 2 cut(s) 800, 1376
PsuI RGATCY 3 cut(s) 102, 582, 1373
PsyI GACNNNGTC 2 cut(s) 315, 842
PvuII CAGCTG 1 cut(s) 242
RruI TCGCGA 1 cut(s) 384
RsaI GTAC 5 cut(s) 347, 524, 688, 1172, 1286
RsaNI GTAC 5 cut(s) 346, 523, 687, 1171, 1285
RseI CAYNNNNRTG 1 cut(s) 224
SacI GAGCTC 2 cut(s) 565, 769
SacII CCGCGG 1 cut(s) 285
SaqAI TTAA 2 cut(s) 455, 1010
Sau3AI GATC 9 cut(s) 102, 202, 582, 677, 731, 754, 779, 1313, 1373
Sau96I GGNCC 3 cut(s) 576, 641, 844
SchI GAGTC 2 cut(s) 185, 950
ScrFI CCNGG 5 cut(s) 639, 653, 682, 795, 1371
SduI GDGCHC 3 cut(s) 565, 769, 1240
SexAI ACCWGGT 1 cut(s) 637
SfcI CTRYAG 3 cut(s) 118, 801, 1404
Sfr274I CTCGAG 1 cut(s) 564
Sfr303I CCGCGG 1 cut(s) 285
SgrBI CCGCGG 1 cut(s) 285
SinI GGWCC 3 cut(s) 576, 641, 844
SlaI CTCGAG 1 cut(s) 564
SmiMI CAYNNNNRTG 1 cut(s) 224
SmlI CTYRAG 2 cut(s) 564, 727
SmoI CTYRAG 2 cut(s) 564, 727
SphI GCATGC 3 cut(s) 218, 1200, 1402
Sse9I AATT 3 cut(s) 659, 1022, 1108
SseBI AGGCCT 1 cut(s) 1252
SspI AATATT 1 cut(s) 543
SspMI CTAG 2 cut(s) 1029, 1269
SstI GAGCTC 2 cut(s) 565, 769
StuI AGGCCT 1 cut(s) 1252
StyD4I CCNGG 5 cut(s) 637, 651, 680, 793, 1369
TaaI ACNGT 2 cut(s) 315, 1077
TaiI ACGT 3 cut(s) 198, 351, 889
TaqI TCGA 5 cut(s) 565, 676, 849, 855, 1151
TasI AATT 3 cut(s) 659, 1022, 1108
TatI WGTACW 1 cut(s) 686
TauI GCSGC 9 cut(s) 233, 236, 260, 269, 272, 284, 287, 344, 416
TfiI GAWTC 3 cut(s) 379, 628, 1307
Tru1I TTAA 2 cut(s) 455, 1010
Tru9I TTAA 2 cut(s) 455, 1010
TscAI CASTG 1 cut(s) 810
TseFI GTSAC 1 cut(s) 1227
TseI GCWGC 6 cut(s) 27, 242, 278, 306, 395, 878
Tsp45I GTSAC 1 cut(s) 1227
TspDTI ATGAA 3 cut(s) 693, 711, 1283
TspGWI ACGGA 1 cut(s) 975
TspRI CASTG 1 cut(s) 810
Tth111I GACNNNGTC 2 cut(s) 315, 842
Van91I CCANNNNNTGG 1 cut(s) 1376
VpaK11BI GGWCC 3 cut(s) 576, 641, 844
XapI RAATTY 2 cut(s) 659, 1022
XbaI TCTAGA 1 cut(s) 1028
XceI RCATGY 3 cut(s) 218, 1200, 1402
XhoI CTCGAG 1 cut(s) 564
XspI CTAG 2 cut(s) 1029, 1269
ZraI GACGTC 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.