Rroxscaffold_3G00257190

iq-domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0010781
Physical Location & Seq
Forward (+)
51590743 .. 51594816
4074 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00257190.1

Sequence Viewer

Length: 1455 bp
ATGGGCAAAGCTTCAAGATGGTTCCGCAGCGTTCTCGGCCTCAAAAAGTCCGACAAGACCCACAACAACAACTACTCCTCACCTTGTCCCAAACCGCCATCCACCAAGCGCAGATGGAGCTTTGTCAAGTCCTACAGAGAAAAAGACCACCCACACAATCACAACCACCAAACCGACCCCGCTGACGAGTCCTCCTCCGCAAACGACGTCGCTGATCCGAACAAGCATGCCATCGCCGTGGCGGCCGCGACAGCTGCCGTGGCCGAGGCCGCTGTTGCCGCCGCCCAAGCTGCCGCGGCCGTCGTCCGCCTCACCAGTAGCGGACGGTGTCCCAGCAACAACAGCAACAGCAACAGCAACAACCCCGCGGCGTACGTTAGCGGTGGCGGAGGAGGAAGCGTTGGGATTCGCGAAGAGTGGGCAGCTGTGAAAATCCAAGCGGCGTTCCGTGGCTGTTTGGCGAGGAGAGCATTGCGTGCATTAAAAGGACTGGTGAGGCTTCAAGCACTGGTTAGAGGTCATATTGAGAGGAAGAAGTGGGCTAAGCGGTACCAGCGGTTTCAAGCAATATTGCGAGTGCAGGCCAGAGCTCGAGCAGGGCGGACCCAGATCTCAGAGCTCTCACATTCACATTCAAGTTCTCAATCTTCTCAGATTCACCAACCTGGTCCTGCAACCCCTGAAAAATTTGAACATGGCCTTCGATCCTGGAGTACAAAACATGAACATTCATCAATACTCCGGAGAAATAGCTCAAGATCAAATGGTAGGATTATTGGTGATCATGACAGAGCTCACTCAGAACAATCATGGGAGCAACCAGGGTCTGCAGTGAAGAATGGCACTCCTGAGGATGAGAAGAATGACAGGGTCCTCGAAATCGATACTGGGAAACCCCATATTGCAGCTAAACGTAGAAGCCTCTTCCACTCTACTCATCTTGCTGTCGCTTCAGACCAATACAGCCATAGCTTTACTACATCAAAGGACTCAACAACTCATCAGACACTTCCAAGTCCGTCTTCTTGTGAAGTCCAATCGTTAACCCCATTGAAATTCTCTAGAGAGCTGGAGGAAGACGCATTCTGCACAGCTAACAATAGCCCACAGTTTTATTCTGCTACTTCTTCAAGGGGTGGTAATTCAAAGAAAAGTCCTTTCACTCCCACAAAGAGTGATGGCTCGAAAAGTTACCTAAGTGGGTACTCAGATTACCCAAACTACATGGCATGCACTCAATCTTCTAAGGCTAAGCTGAGGTCACTTAGTGCTCCGAAGCAGAGGCCTCAGTATGAGAGGTCTAGTTCAGCAAAGAGGTACTCTGTTCATGGCTTTGGCGAATCAAGATCAAATGCACAAAGGAGTTCAGCCTTGCATTCAAACTTCACAAATAAAGCCTACCCTGGATCTGGTCGCTTGGACAAGCTTGGCATGCCTGTAGGTTACAGATACTAA

Protein Analysis

484

Amino Acids

53.03

Weight (kDa)

10.13

Isoelectric Point (pI)

63.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 368 - 453 9.2e-11 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010781)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23060
fragaria_vesca FvH4_5g01680 FvH4_5g01680 FvH4_5g01680
malus_domestica MD04G1065600.v1.1
prunus_persica Prupe.5G092600_v2.0.a1
pyrus_communis pycom04g05910 pycom06g07330
rosa_chinensis RchiOBHm_Chr7g0199041
rosa_laevigata RLG00000003820
rosa_multiflora Rmu_co8081240.1_g000001 Rmu_sc0006266.1_g000033 Rmu_sc0007328.1_g000001
rosa_roxburghii Rroxscaffold_3G00257190
rosa_rugosa Rorug07G0052200
rosa_samantha Rh7AG175400 Rh7BG178800 Rh7CG184600 Rh7DG178200
rosa_wichuraiana Rw7G015390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 210
Acc65I GGTACC 1 cut(s) 549
AccB1I GGYRCC 1 cut(s) 549
AccII CGCG 4 cut(s) 248, 296, 368, 411
AccIII TCCGGA 1 cut(s) 741
AclWI GGATC 3 cut(s) 209, 699, 1414
AcoI YGGCCR 3 cut(s) 243, 261, 297
AcsI RAATTY 2 cut(s) 686, 1055
AcuI CTGAAG 1 cut(s) 936
AcyI GRCGYC 1 cut(s) 207
AdeI CACNNNGTG 1 cut(s) 1268
AfaI GTAC 5 cut(s) 374, 551, 715, 1205, 1319
AfiI CCNNNNNNNGG 1 cut(s) 1409
AgsI TTSAA 9 cut(s) 15, 503, 563, 636, 692, 1054, 1131, 1146, 1380
AjnI CCWGG 4 cut(s) 664, 707, 820, 1402
AjuI GAANNNNNNNTTGG 2 cut(s) 1006, 1038
Alw21I GWGCWC 4 cut(s) 592, 621, 796, 1273
AlwI GGATC 3 cut(s) 209, 699, 1414
AlwNI CAGNNNCTG 1 cut(s) 827
Ama87I CYCGRG 1 cut(s) 591
Aor13HI TCCGGA 1 cut(s) 741
AoxI GGCC 8 cut(s) 37, 243, 261, 267, 297, 582, 697, 1283
ApeKI GCWGC 5 cut(s) 27, 254, 290, 422, 905
ApoI RAATTY 2 cut(s) 686, 1055
Asp718I GGTACC 1 cut(s) 549
AspLEI GCGC 1 cut(s) 111
AspS9I GGNCC 3 cut(s) 603, 668, 871
AsuHPI GGTGA 5 cut(s) 72, 304, 505, 650, 791
AvaI CYCGRG 1 cut(s) 591
AvaII GGWCC 3 cut(s) 603, 668, 871
AxyI CCTNAGG 1 cut(s) 849
BanI GGYRCC 1 cut(s) 549
BanII GRGCYC 3 cut(s) 592, 621, 796
BbsI GAAGAC 2 cut(s) 1014, 1083
Bbv12I GWGCWC 4 cut(s) 592, 621, 796, 1273
BbvCI CCTCAGC 1 cut(s) 1256
BbvI GCAGC 5 cut(s) 39, 241, 277, 434, 917
BccI CCATC 5 cut(s) 12, 106, 108, 239, 1172
BceAI ACGGC 3 cut(s) 221, 242, 284
BcgI CGANNNNNNTGC 2 cut(s) 16, 50
BciT130I CCWGG 4 cut(s) 666, 709, 822, 1404
BclI TGATCA 1 cut(s) 781
BfaI CTAG 2 cut(s) 1062, 1302
BfmI CTRYAG 3 cut(s) 133, 828, 1437
BglI GCCNNNNNGGC 1 cut(s) 242
BglII AGATCT 1 cut(s) 609
BlpI GCTNAGC 2 cut(s) 543, 1251
Bme1390I CCNGG 4 cut(s) 666, 709, 822, 1404
Bme18I GGWCC 3 cut(s) 603, 668, 871
BmeT110I CYCGRG 1 cut(s) 591
BmgT120I GGNCC 3 cut(s) 603, 668, 871
BmiI GGNNCC 4 cut(s) 23, 551, 605, 872
BmrFI CCNGG 4 cut(s) 666, 709, 822, 1404
BmrI ACTGGG 1 cut(s) 897
BmuI ACTGGG 1 cut(s) 897
BpiI GAAGAC 2 cut(s) 1014, 1083
BplI GAGNNNNNCTC 2 cut(s) 179, 211
BpmI CTGGAG 2 cut(s) 730, 1091
Bpu10I CCTNAGC 1 cut(s) 1256
Bpu1102I GCTNAGC 2 cut(s) 543, 1251
BpuEI CTTGAG 1 cut(s) 739
Bsa29I ATCGAT 1 cut(s) 882
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 8 cut(s) 237, 258, 264, 294, 366, 448, 821, 1402
BsaWI WCCGGW 1 cut(s) 741
BsaXI ACNNNNNCTCC 6 cut(s) 59, 89, 176, 206, 384, 414
Bsc4I CCNNNNNNNGG 1 cut(s) 1409
Bse1I ACTGG 4 cut(s) 315, 495, 513, 892
Bse21I CCTNAGG 1 cut(s) 849
Bse3DI GCAATG 1 cut(s) 470
BseAI TCCGGA 1 cut(s) 741
BseBI CCWGG 4 cut(s) 666, 709, 822, 1404
BseCI ATCGAT 1 cut(s) 882
BseDI CCNNGG 8 cut(s) 237, 258, 264, 294, 366, 448, 821, 1402
BseGI GGATG 2 cut(s) 98, 859
BseLI CCNNNNNNNGG 1 cut(s) 1409
BseMI GCAATG 1 cut(s) 470
BseMII CTCAG 7 cut(s) 627, 665, 813, 840, 1221, 1247, 1301
BseNI ACTGG 4 cut(s) 315, 495, 513, 892
BseRI GAGGAG 4 cut(s) 67, 184, 405, 478
BseX3I CGGCCG 2 cut(s) 243, 297
BseXI GCAGC 5 cut(s) 39, 241, 277, 434, 917
BseYI CCCAGC 1 cut(s) 332
BsgI GTGCAG 2 cut(s) 599, 1072
Bsh1236I CGCG 4 cut(s) 248, 296, 368, 411
Bsh1285I CGRYCG 2 cut(s) 246, 300
BshFI GGCC 8 cut(s) 39, 245, 263, 269, 299, 584, 699, 1285
BshNI GGYRCC 1 cut(s) 549
BshVI ATCGAT 1 cut(s) 882
BsiEI CGRYCG 2 cut(s) 246, 300
BsiHKAI GWGCWC 4 cut(s) 592, 621, 796, 1273
BsiHKCI CYCGRG 1 cut(s) 591
BsiSI CCGG 1 cut(s) 742
BsiWI CGTACG 1 cut(s) 372
BslFI GGGAC 2 cut(s) 72, 315
BslI CCNNNNNNNGG 1 cut(s) 1409
BsmFI GGGAC 2 cut(s) 72, 315
BsmI GAATGC 2 cut(s) 1082, 1375
BsnI GGCC 8 cut(s) 39, 245, 263, 269, 299, 584, 699, 1285
BsoBI CYCGRG 1 cut(s) 591
Bsp1286I GDGCHC 4 cut(s) 592, 621, 796, 1273
Bsp13I TCCGGA 1 cut(s) 741
Bsp143I GATC 7 cut(s) 214, 609, 704, 758, 781, 1346, 1406
Bsp1720I GCTNAGC 2 cut(s) 543, 1251
Bsp68I TCGCGA 1 cut(s) 411
BspANI GGCC 8 cut(s) 39, 245, 263, 269, 299, 584, 699, 1285
BspCNI CTCAG 7 cut(s) 626, 664, 812, 841, 1220, 1248, 1300
BspDI ATCGAT 1 cut(s) 882
BspEI TCCGGA 1 cut(s) 741
BspFNI CGCG 4 cut(s) 248, 296, 368, 411
BspHI TCATGA 1 cut(s) 784
BspLI GGNNCC 4 cut(s) 23, 551, 605, 872
BspMAI CTGCAG 1 cut(s) 832
BspPI GGATC 3 cut(s) 209, 699, 1414
BspT107I GGYRCC 1 cut(s) 549
BsrDI GCAATG 1 cut(s) 470
BsrI ACTGG 4 cut(s) 315, 495, 513, 892
BssECI CCNNGG 8 cut(s) 237, 258, 264, 294, 366, 448, 821, 1402
BssMI GATC 7 cut(s) 214, 609, 704, 758, 781, 1346, 1406
BssNI GRCGYC 1 cut(s) 207
Bst2UI CCWGG 4 cut(s) 666, 709, 822, 1404
Bst4CI ACNGT 2 cut(s) 327, 1110
Bst6I CTCTTC 2 cut(s) 408, 929
BstACI GRCGYC 1 cut(s) 207
BstAPI GCANNNNNTGC 1 cut(s) 476
BstC8I GCNNGC 5 cut(s) 228, 477, 582, 1231, 1433
BstDSI CCRYGG 5 cut(s) 237, 258, 294, 366, 448
BstF5I GGATG 2 cut(s) 98, 859
BstFNI CGCG 4 cut(s) 248, 296, 368, 411
BstHHI GCGC 1 cut(s) 111
BstKTI GATC 7 cut(s) 217, 612, 707, 761, 784, 1349, 1409
BstMBI GATC 7 cut(s) 214, 609, 704, 758, 781, 1346, 1406
BstMCI CGRYCG 2 cut(s) 246, 300
BstNI CCWGG 4 cut(s) 666, 709, 822, 1404
BstNSI RCATGY 3 cut(s) 230, 1233, 1435
BstSCI CCNGG 4 cut(s) 664, 707, 820, 1402
BstSFI CTRYAG 3 cut(s) 133, 828, 1437
BstUI CGCG 4 cut(s) 248, 296, 368, 411
BstV1I GCAGC 5 cut(s) 39, 241, 277, 434, 917
BstV2I GAAGAC 2 cut(s) 1014, 1083
BstX2I RGATCY 2 cut(s) 609, 1406
BstXI CCANNNNNNTGG 1 cut(s) 238
BstYI RGATCY 2 cut(s) 609, 1406
BstZI CGGCCG 2 cut(s) 243, 297
Bsu15I ATCGAT 1 cut(s) 882
Bsu36I CCTNAGG 1 cut(s) 849
BsuRI GGCC 8 cut(s) 39, 245, 263, 269, 299, 584, 699, 1285
BsuTUI ATCGAT 1 cut(s) 882
BtgI CCRYGG 5 cut(s) 237, 258, 294, 366, 448
BtgZI GCGATG 1 cut(s) 217
BtsCI GGATG 2 cut(s) 98, 859
BtsI GCAGTG 1 cut(s) 837
BtsIMutI CAGTG 2 cut(s) 506, 837
BtuMI TCGCGA 1 cut(s) 411
Cac8I GCNNGC 5 cut(s) 228, 477, 582, 1231, 1433
CaiI CAGNNNCTG 1 cut(s) 827
CciI TCATGA 1 cut(s) 784
CciNI GCGGCCGC 1 cut(s) 243
CfoI GCGC 1 cut(s) 111
Cfr13I GGNCC 3 cut(s) 603, 668, 871
Cfr42I CCGCGG 2 cut(s) 297, 369
ClaI ATCGAT 1 cut(s) 882
CseI GACGC 1 cut(s) 1088
CsiI ACCWGGT 1 cut(s) 664
Csp6I GTAC 5 cut(s) 373, 550, 714, 1204, 1318
CviAII CATG 9 cut(s) 227, 695, 722, 785, 810, 1225, 1230, 1328, 1432
CviQI GTAC 5 cut(s) 373, 550, 714, 1204, 1318
DpnI GATC 7 cut(s) 216, 611, 706, 760, 783, 1348, 1408
DpnII GATC 7 cut(s) 214, 609, 704, 758, 781, 1346, 1406
DraIII CACNNNGTG 1 cut(s) 1268
EaeI YGGCCR 3 cut(s) 243, 261, 297
EagI CGGCCG 2 cut(s) 243, 297
Eam1104I CTCTTC 2 cut(s) 408, 929
EarI CTCTTC 2 cut(s) 408, 929
EciI GGCGGA 3 cut(s) 296, 402, 616
Ecl136II GAGCTC 3 cut(s) 590, 619, 794
EclXI CGGCCG 2 cut(s) 243, 297
Eco147I AGGCCT 1 cut(s) 1285
Eco24I GRGCYC 3 cut(s) 592, 621, 796
Eco47I GGWCC 3 cut(s) 603, 668, 871
Eco52I CGGCCG 2 cut(s) 243, 297
Eco53kI GAGCTC 3 cut(s) 590, 619, 794
Eco57I CTGAAG 1 cut(s) 936
Eco81I CCTNAGG 1 cut(s) 849
Eco88I CYCGRG 1 cut(s) 591
EcoICRI GAGCTC 3 cut(s) 590, 619, 794
EcoO109I RGGNCCY 1 cut(s) 871
EcoRII CCWGG 4 cut(s) 664, 707, 820, 1402
EcoT38I GRGCYC 3 cut(s) 592, 621, 796
FaeI CATG 9 cut(s) 230, 698, 725, 788, 813, 1228, 1233, 1331, 1435
FalI AAGNNNNNCTT 2 cut(s) 1006, 1038
FaqI GGGAC 2 cut(s) 72, 315
FatI CATG 9 cut(s) 226, 694, 721, 784, 809, 1224, 1229, 1327, 1431
FauI CCCGC 2 cut(s) 187, 373
FbaI TGATCA 1 cut(s) 781
FokI GGATG 2 cut(s) 85, 866
FriOI GRGCYC 3 cut(s) 592, 621, 796
FspBI CTAG 2 cut(s) 1062, 1302
GlaI GCGC 1 cut(s) 110
GsaI CCCAGC 1 cut(s) 336
GsuI CTGGAG 2 cut(s) 730, 1091
HaeIII GGCC 8 cut(s) 39, 245, 263, 269, 299, 584, 699, 1285
HapII CCGG 1 cut(s) 742
HgaI GACGC 1 cut(s) 1088
HhaI GCGC 1 cut(s) 111
Hin1I GRCGYC 1 cut(s) 207
Hin1II CATG 9 cut(s) 230, 698, 725, 788, 813, 1228, 1233, 1331, 1435
Hin6I GCGC 1 cut(s) 109
HinP1I GCGC 1 cut(s) 109
HincII GTYRAC 1 cut(s) 1044
HindII GTYRAC 1 cut(s) 1044
HindIII AAGCTT 2 cut(s) 9, 1424
HinfI GANTC 5 cut(s) 188, 406, 655, 989, 1340
HpaI GTTAAC 1 cut(s) 1044
HpaII CCGG 1 cut(s) 742
HphI GGTGA 5 cut(s) 72, 304, 505, 650, 791
Hpy166II GTNNAC 1 cut(s) 1044
Hpy188I TCNGA 9 cut(s) 52, 219, 616, 654, 802, 955, 1005, 1210, 1275
Hpy188III TCNNGA 8 cut(s) 15, 410, 742, 756, 785, 848, 1062, 1344
Hpy8I GTNNAC 1 cut(s) 1044
Hpy99I CGWCG 3 cut(s) 209, 212, 305
HpyAV CCTTC 1 cut(s) 710
HpyCH4III ACNGT 2 cut(s) 327, 1110
HpyCH4IV ACGT 3 cut(s) 207, 375, 913
HpyCH4V TGCA 9 cut(s) 479, 580, 674, 830, 905, 1089, 1233, 1355, 1375
HpySE526I ACGT 3 cut(s) 207, 375, 913
Hsp92I GRCGYC 1 cut(s) 207
Hsp92II CATG 9 cut(s) 230, 698, 725, 788, 813, 1228, 1233, 1331, 1435
HspAI GCGC 1 cut(s) 109
Kpn2I TCCGGA 1 cut(s) 741
KpnI GGTACC 1 cut(s) 553
Ksp22I TGATCA 1 cut(s) 781
KspAI GTTAAC 1 cut(s) 1044
KspI CCGCGG 2 cut(s) 297, 369
Kzo9I GATC 7 cut(s) 214, 609, 704, 758, 781, 1346, 1406
LmnI GCTCC 3 cut(s) 117, 814, 1276
Lsp1109I GCAGC 5 cut(s) 39, 241, 277, 434, 917
MabI ACCWGGT 1 cut(s) 664
MaeI CTAG 2 cut(s) 1062, 1302
MaeII ACGT 3 cut(s) 207, 375, 913
MaeIII GTNAC 3 cut(s) 1190, 1260, 1442
MalI GATC 7 cut(s) 216, 611, 706, 760, 783, 1348, 1408
MboI GATC 7 cut(s) 214, 609, 704, 758, 781, 1346, 1406
MflI RGATCY 2 cut(s) 609, 1406
MhlI GDGCHC 4 cut(s) 592, 621, 796, 1273
MluCI AATT 3 cut(s) 686, 1055, 1141
MlyI GAGTC 2 cut(s) 197, 983
MmeI TCCRAC 1 cut(s) 75
MroI TCCGGA 1 cut(s) 741
MseI TTAA 2 cut(s) 482, 1043
MslI CAYNNNNRTG 1 cut(s) 236
MspA1I CMGCKG 7 cut(s) 182, 254, 272, 296, 368, 425, 556
MspI CCGG 1 cut(s) 742
MspR9I CCNGG 4 cut(s) 666, 709, 822, 1404
Mva1269I GAATGC 2 cut(s) 1082, 1375
MvaI CCWGG 4 cut(s) 666, 709, 822, 1404
MvnI CGCG 4 cut(s) 248, 296, 368, 411
NdeII GATC 7 cut(s) 214, 609, 704, 758, 781, 1346, 1406
NlaIII CATG 9 cut(s) 230, 698, 725, 788, 813, 1228, 1233, 1331, 1435
NlaIV GGNNCC 4 cut(s) 23, 551, 605, 872
NmeAIII GCCGAG 2 cut(s) 15, 289
NmuCI GTSAC 1 cut(s) 1260
NotI GCGGCCGC 1 cut(s) 243
NruI TCGCGA 1 cut(s) 411
NspI RCATGY 3 cut(s) 230, 1233, 1435
PaeI GCATGC 3 cut(s) 230, 1233, 1435
PaeR7I CTCGAG 1 cut(s) 591
PagI TCATGA 1 cut(s) 784
PceI AGGCCT 1 cut(s) 1285
PctI GAATGC 2 cut(s) 1082, 1375
PfeI GAWTC 3 cut(s) 406, 655, 1340
Pfl23II CGTACG 1 cut(s) 372
PflFI GACNNNGTC 2 cut(s) 327, 869
PfoI TCCNGGA 1 cut(s) 707
PleI GAGTC 2 cut(s) 196, 983
PpsI GAGTC 2 cut(s) 196, 983
PpuMI RGGWCCY 1 cut(s) 871
Psp124BI GAGCTC 3 cut(s) 592, 621, 796
Psp5II RGGWCCY 1 cut(s) 871
Psp6I CCWGG 4 cut(s) 664, 707, 820, 1402
PspFI CCCAGC 1 cut(s) 332
PspGI CCWGG 4 cut(s) 664, 707, 820, 1402
PspLI CGTACG 1 cut(s) 372
PspN4I GGNNCC 4 cut(s) 23, 551, 605, 872
PspPI GGNCC 3 cut(s) 603, 668, 871
PspPPI RGGWCCY 1 cut(s) 871
PspXI VCTCGAGB 1 cut(s) 591
PstI CTGCAG 1 cut(s) 832
PstNI CAGNNNCTG 1 cut(s) 827
PsuI RGATCY 2 cut(s) 609, 1406
PsyI GACNNNGTC 2 cut(s) 327, 869
PvuII CAGCTG 2 cut(s) 254, 425
RruI TCGCGA 1 cut(s) 411
RsaI GTAC 5 cut(s) 374, 551, 715, 1205, 1319
RsaNI GTAC 5 cut(s) 373, 550, 714, 1204, 1318
RseI CAYNNNNRTG 1 cut(s) 236
SacI GAGCTC 3 cut(s) 592, 621, 796
SacII CCGCGG 2 cut(s) 297, 369
SaqAI TTAA 2 cut(s) 482, 1043
Sau3AI GATC 7 cut(s) 214, 609, 704, 758, 781, 1346, 1406
Sau96I GGNCC 3 cut(s) 603, 668, 871
SchI GAGTC 2 cut(s) 197, 983
ScrFI CCNGG 4 cut(s) 666, 709, 822, 1404
SduI GDGCHC 4 cut(s) 592, 621, 796, 1273
SexAI ACCWGGT 1 cut(s) 664
SfcI CTRYAG 3 cut(s) 133, 828, 1437
Sfr274I CTCGAG 1 cut(s) 591
Sfr303I CCGCGG 2 cut(s) 297, 369
SgrBI CCGCGG 2 cut(s) 297, 369
SinI GGWCC 3 cut(s) 603, 668, 871
SlaI CTCGAG 1 cut(s) 591
SmiMI CAYNNNNRTG 1 cut(s) 236
SmlI CTYRAG 2 cut(s) 591, 754
SmoI CTYRAG 2 cut(s) 591, 754
SphI GCATGC 3 cut(s) 230, 1233, 1435
Sse9I AATT 3 cut(s) 686, 1055, 1141
SseBI AGGCCT 1 cut(s) 1285
SspI AATATT 1 cut(s) 570
SspMI CTAG 2 cut(s) 1062, 1302
SstI GAGCTC 3 cut(s) 592, 621, 796
StuI AGGCCT 1 cut(s) 1285
StyD4I CCNGG 4 cut(s) 664, 707, 820, 1402
TaaI ACNGT 2 cut(s) 327, 1110
TaiI ACGT 3 cut(s) 210, 378, 916
TaqI TCGA 5 cut(s) 592, 703, 876, 882, 1184
TasI AATT 3 cut(s) 686, 1055, 1141
TatI WGTACW 1 cut(s) 713
TauI GCSGC 9 cut(s) 245, 248, 272, 281, 284, 296, 299, 371, 443
TfiI GAWTC 3 cut(s) 406, 655, 1340
Tru1I TTAA 2 cut(s) 482, 1043
Tru9I TTAA 2 cut(s) 482, 1043
TscAI CASTG 2 cut(s) 513, 837
TseFI GTSAC 1 cut(s) 1260
TseI GCWGC 5 cut(s) 27, 254, 290, 422, 905
Tsp45I GTSAC 1 cut(s) 1260
TspDTI ATGAA 3 cut(s) 720, 738, 1316
TspGWI ACGGA 2 cut(s) 437, 1008
TspRI CASTG 2 cut(s) 513, 837
Tth111I GACNNNGTC 2 cut(s) 327, 869
VpaK11BI GGWCC 3 cut(s) 603, 668, 871
XapI RAATTY 2 cut(s) 686, 1055
XbaI TCTAGA 1 cut(s) 1061
XceI RCATGY 3 cut(s) 230, 1233, 1435
XhoI CTCGAG 1 cut(s) 591
XspI CTAG 2 cut(s) 1062, 1302
ZraI GACGTC 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.