iq-domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G23060 |
| fragaria_vesca | FvH4_5g01680 FvH4_5g01680 FvH4_5g01680 |
| malus_domestica | MD04G1065600.v1.1 |
| prunus_persica | Prupe.5G092600_v2.0.a1 |
| pyrus_communis | pycom04g05910 pycom06g07330 |
| rosa_chinensis | RchiOBHm_Chr7g0199041 |
| rosa_laevigata | RLG00000003820 |
| rosa_multiflora | Rmu_co8081240.1_g000001 Rmu_sc0006266.1_g000033 Rmu_sc0007328.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00257190 |
| rosa_rugosa | Rorug07G0052200 |
| rosa_samantha | Rh7AG175400 Rh7BG178800 Rh7CG184600 Rh7DG178200 |
| rosa_wichuraiana | Rw7G015390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 198 |
| Acc65I | GGTACC | 1 cut(s) | 525 |
| AccB1I | GGYRCC | 1 cut(s) | 525 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1379 |
| AccII | CGCG | 3 cut(s) | 236, 284, 387 |
| AclWI | GGATC | 4 cut(s) | 110, 197, 675, 1384 |
| AcoI | YGGCCR | 3 cut(s) | 231, 249, 285 |
| AcsI | RAATTY | 2 cut(s) | 662, 1025 |
| AcuI | CTGAAG | 1 cut(s) | 906 |
| AcyI | GRCGYC | 1 cut(s) | 195 |
| AfaI | GTAC | 5 cut(s) | 350, 527, 691, 1175, 1289 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1379 |
| AjnI | CCWGG | 4 cut(s) | 640, 683, 796, 1372 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 976, 1008 |
| Alw21I | GWGCWC | 3 cut(s) | 568, 772, 1243 |
| AlwI | GGATC | 4 cut(s) | 110, 197, 675, 1384 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 803, 1379 |
| Ama87I | CYCGRG | 1 cut(s) | 567 |
| AoxI | GGCC | 8 cut(s) | 37, 231, 249, 255, 285, 558, 673, 1253 |
| ApeKI | GCWGC | 6 cut(s) | 27, 242, 278, 306, 398, 881 |
| ApoI | RAATTY | 2 cut(s) | 662, 1025 |
| Asp718I | GGTACC | 1 cut(s) | 525 |
| AspLEI | GCGC | 2 cut(s) | 96, 556 |
| AspS9I | GGNCC | 3 cut(s) | 579, 644, 847 |
| AsuHPI | GGTGA | 5 cut(s) | 57, 292, 481, 626, 767 |
| AvaI | CYCGRG | 1 cut(s) | 567 |
| AvaII | GGWCC | 3 cut(s) | 579, 644, 847 |
| AxyI | CCTNAGG | 1 cut(s) | 825 |
| BanI | GGYRCC | 1 cut(s) | 525 |
| BanII | GRGCYC | 2 cut(s) | 568, 772 |
| BbsI | GAAGAC | 2 cut(s) | 984, 1053 |
| Bbv12I | GWGCWC | 3 cut(s) | 568, 772, 1243 |
| BbvCI | CCTCAGC | 1 cut(s) | 1226 |
| BbvI | GCAGC | 6 cut(s) | 39, 229, 265, 318, 410, 893 |
| BccI | CCATC | 5 cut(s) | 12, 91, 93, 227, 1142 |
| BceAI | ACGGC | 4 cut(s) | 209, 230, 272, 386 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 16, 50 |
| BciT130I | CCWGG | 4 cut(s) | 642, 685, 798, 1374 |
| BclI | TGATCA | 1 cut(s) | 757 |
| BfaI | CTAG | 2 cut(s) | 1032, 1272 |
| BfmI | CTRYAG | 3 cut(s) | 118, 804, 1407 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 230 |
| BglII | AGATCT | 1 cut(s) | 585 |
| BlpI | GCTNAGC | 2 cut(s) | 519, 1221 |
| Bme1390I | CCNGG | 4 cut(s) | 642, 685, 798, 1374 |
| Bme18I | GGWCC | 3 cut(s) | 579, 644, 847 |
| BmeT110I | CYCGRG | 1 cut(s) | 567 |
| BmgT120I | GGNCC | 3 cut(s) | 579, 644, 847 |
| BmiI | GGNNCC | 4 cut(s) | 23, 527, 581, 848 |
| BmrFI | CCNGG | 4 cut(s) | 642, 685, 798, 1374 |
| BmrI | ACTGGG | 1 cut(s) | 873 |
| BmuI | ACTGGG | 1 cut(s) | 873 |
| BpiI | GAAGAC | 2 cut(s) | 984, 1053 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 167, 199 |
| BpmI | CTGGAG | 1 cut(s) | 1061 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1226 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 519, 1221 |
| BpuEI | CTTGAG | 1 cut(s) | 715 |
| Bsa29I | ATCGAT | 1 cut(s) | 858 |
| BsaHI | GRCGYC | 1 cut(s) | 195 |
| BsaJI | CCNNGG | 7 cut(s) | 225, 246, 252, 282, 424, 797, 1372 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 44, 74, 164, 194, 360, 390 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1379 |
| Bse1I | ACTGG | 1 cut(s) | 868 |
| Bse21I | CCTNAGG | 1 cut(s) | 825 |
| Bse3DI | GCAATG | 1 cut(s) | 446 |
| BseBI | CCWGG | 4 cut(s) | 642, 685, 798, 1374 |
| BseCI | ATCGAT | 1 cut(s) | 858 |
| BseDI | CCNNGG | 7 cut(s) | 225, 246, 252, 282, 424, 797, 1372 |
| BseGI | GGATG | 2 cut(s) | 83, 835 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1379 |
| BseMI | GCAATG | 1 cut(s) | 446 |
| BseMII | CTCAG | 6 cut(s) | 603, 641, 816, 1191, 1217, 1271 |
| BseNI | ACTGG | 1 cut(s) | 868 |
| BseRI | GAGGAG | 5 cut(s) | 52, 172, 381, 404, 454 |
| BseX3I | CGGCCG | 2 cut(s) | 231, 285 |
| BseXI | GCAGC | 6 cut(s) | 39, 229, 265, 318, 410, 893 |
| BseYI | CCCAGC | 1 cut(s) | 340 |
| BsgI | GTGCAG | 1 cut(s) | 1042 |
| Bsh1236I | CGCG | 3 cut(s) | 236, 284, 387 |
| Bsh1285I | CGRYCG | 2 cut(s) | 234, 288 |
| BshFI | GGCC | 8 cut(s) | 39, 233, 251, 257, 287, 560, 675, 1255 |
| BshNI | GGYRCC | 1 cut(s) | 525 |
| BshVI | ATCGAT | 1 cut(s) | 858 |
| BsiEI | CGRYCG | 2 cut(s) | 234, 288 |
| BsiHKAI | GWGCWC | 3 cut(s) | 568, 772, 1243 |
| BsiHKCI | CYCGRG | 1 cut(s) | 567 |
| BsiWI | CGTACG | 1 cut(s) | 348 |
| BslFI | GGGAC | 3 cut(s) | 34, 57, 303 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1379 |
| BsmFI | GGGAC | 3 cut(s) | 34, 57, 303 |
| BsmI | GAATGC | 2 cut(s) | 1052, 1345 |
| BsnI | GGCC | 8 cut(s) | 39, 233, 251, 257, 287, 560, 675, 1255 |
| BsoBI | CYCGRG | 1 cut(s) | 567 |
| Bsp1286I | GDGCHC | 3 cut(s) | 568, 772, 1243 |
| Bsp143I | GATC | 9 cut(s) | 102, 202, 585, 680, 734, 757, 782, 1316, 1376 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 519, 1221 |
| Bsp68I | TCGCGA | 1 cut(s) | 387 |
| BspANI | GGCC | 8 cut(s) | 39, 233, 251, 257, 287, 560, 675, 1255 |
| BspCNI | CTCAG | 6 cut(s) | 602, 640, 817, 1190, 1218, 1270 |
| BspDI | ATCGAT | 1 cut(s) | 858 |
| BspFNI | CGCG | 3 cut(s) | 236, 284, 387 |
| BspHI | TCATGA | 1 cut(s) | 760 |
| BspLI | GGNNCC | 4 cut(s) | 23, 527, 581, 848 |
| BspMAI | CTGCAG | 1 cut(s) | 808 |
| BspPI | GGATC | 4 cut(s) | 110, 197, 675, 1384 |
| BspT107I | GGYRCC | 1 cut(s) | 525 |
| BsrDI | GCAATG | 1 cut(s) | 446 |
| BsrI | ACTGG | 1 cut(s) | 868 |
| BssECI | CCNNGG | 7 cut(s) | 225, 246, 252, 282, 424, 797, 1372 |
| BssMI | GATC | 9 cut(s) | 102, 202, 585, 680, 734, 757, 782, 1316, 1376 |
| BssNI | GRCGYC | 1 cut(s) | 195 |
| Bst2UI | CCWGG | 4 cut(s) | 642, 685, 798, 1374 |
| Bst4CI | ACNGT | 2 cut(s) | 315, 1080 |
| Bst6I | CTCTTC | 1 cut(s) | 905 |
| BstACI | GRCGYC | 1 cut(s) | 195 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 452 |
| BstC8I | GCNNGC | 7 cut(s) | 216, 373, 453, 552, 558, 1201, 1403 |
| BstDEI | CTNAG | 9 cut(s) | 519, 589, 627, 825, 1166, 1177, 1221, 1226, 1257 |
| BstDSI | CCRYGG | 3 cut(s) | 225, 246, 282 |
| BstF5I | GGATG | 2 cut(s) | 83, 835 |
| BstFNI | CGCG | 3 cut(s) | 236, 284, 387 |
| BstHHI | GCGC | 2 cut(s) | 96, 556 |
| BstKTI | GATC | 9 cut(s) | 105, 205, 588, 683, 737, 760, 785, 1319, 1379 |
| BstMBI | GATC | 9 cut(s) | 102, 202, 585, 680, 734, 757, 782, 1316, 1376 |
| BstMCI | CGRYCG | 2 cut(s) | 234, 288 |
| BstNI | CCWGG | 4 cut(s) | 642, 685, 798, 1374 |
| BstNSI | RCATGY | 2 cut(s) | 1203, 1405 |
| BstSCI | CCNGG | 4 cut(s) | 640, 683, 796, 1372 |
| BstSFI | CTRYAG | 3 cut(s) | 118, 804, 1407 |
| BstUI | CGCG | 3 cut(s) | 236, 284, 387 |
| BstV1I | GCAGC | 6 cut(s) | 39, 229, 265, 318, 410, 893 |
| BstV2I | GAAGAC | 2 cut(s) | 984, 1053 |
| BstX2I | RGATCY | 3 cut(s) | 102, 585, 1376 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 226 |
| BstYI | RGATCY | 3 cut(s) | 102, 585, 1376 |
| BstZI | CGGCCG | 2 cut(s) | 231, 285 |
| Bsu15I | ATCGAT | 1 cut(s) | 858 |
| Bsu36I | CCTNAGG | 1 cut(s) | 825 |
| BsuRI | GGCC | 8 cut(s) | 39, 233, 251, 257, 287, 560, 675, 1255 |
| BsuTUI | ATCGAT | 1 cut(s) | 858 |
| BtgI | CCRYGG | 3 cut(s) | 225, 246, 282 |
| BtgZI | GCGATG | 2 cut(s) | 205, 1161 |
| BtsCI | GGATG | 2 cut(s) | 83, 835 |
| BtsI | GCAGTG | 1 cut(s) | 813 |
| BtsIMutI | CAGTG | 1 cut(s) | 813 |
| BtuMI | TCGCGA | 1 cut(s) | 387 |
| Cac8I | GCNNGC | 7 cut(s) | 216, 373, 453, 552, 558, 1201, 1403 |
| CaiI | CAGNNNCTG | 2 cut(s) | 803, 1379 |
| CciI | TCATGA | 1 cut(s) | 760 |
| CciNI | GCGGCCGC | 1 cut(s) | 231 |
| CfoI | GCGC | 2 cut(s) | 96, 556 |
| Cfr13I | GGNCC | 3 cut(s) | 579, 644, 847 |
| Cfr42I | CCGCGG | 1 cut(s) | 285 |
| ClaI | ATCGAT | 1 cut(s) | 858 |
| CseI | GACGC | 1 cut(s) | 1058 |
| CsiI | ACCWGGT | 1 cut(s) | 640 |
| Csp6I | GTAC | 5 cut(s) | 349, 526, 690, 1174, 1288 |
| CviAII | CATG | 8 cut(s) | 671, 698, 761, 786, 1195, 1200, 1298, 1402 |
| CviQI | GTAC | 5 cut(s) | 349, 526, 690, 1174, 1288 |
| DdeI | CTNAG | 9 cut(s) | 519, 589, 627, 825, 1166, 1177, 1221, 1226, 1257 |
| DpnI | GATC | 9 cut(s) | 104, 204, 587, 682, 736, 759, 784, 1318, 1378 |
| DpnII | GATC | 9 cut(s) | 102, 202, 585, 680, 734, 757, 782, 1316, 1376 |
| EaeI | YGGCCR | 3 cut(s) | 231, 249, 285 |
| EagI | CGGCCG | 2 cut(s) | 231, 285 |
| Eam1104I | CTCTTC | 1 cut(s) | 905 |
| EarI | CTCTTC | 1 cut(s) | 905 |
| EciI | GGCGGA | 3 cut(s) | 284, 378, 592 |
| Ecl136II | GAGCTC | 2 cut(s) | 566, 770 |
| EclXI | CGGCCG | 2 cut(s) | 231, 285 |
| Eco147I | AGGCCT | 1 cut(s) | 1255 |
| Eco24I | GRGCYC | 2 cut(s) | 568, 772 |
| Eco47I | GGWCC | 3 cut(s) | 579, 644, 847 |
| Eco52I | CGGCCG | 2 cut(s) | 231, 285 |
| Eco53kI | GAGCTC | 2 cut(s) | 566, 770 |
| Eco57I | CTGAAG | 1 cut(s) | 906 |
| Eco81I | CCTNAGG | 1 cut(s) | 825 |
| Eco88I | CYCGRG | 1 cut(s) | 567 |
| EcoICRI | GAGCTC | 2 cut(s) | 566, 770 |
| EcoO109I | RGGNCCY | 1 cut(s) | 847 |
| EcoRII | CCWGG | 4 cut(s) | 640, 683, 796, 1372 |
| EcoT38I | GRGCYC | 2 cut(s) | 568, 772 |
| FaeI | CATG | 8 cut(s) | 674, 701, 764, 789, 1198, 1203, 1301, 1405 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 976, 1008 |
| FaqI | GGGAC | 3 cut(s) | 34, 57, 303 |
| FatI | CATG | 8 cut(s) | 670, 697, 760, 785, 1194, 1199, 1297, 1401 |
| FauI | CCCGC | 1 cut(s) | 175 |
| FbaI | TGATCA | 1 cut(s) | 757 |
| FokI | GGATG | 2 cut(s) | 70, 842 |
| FriOI | GRGCYC | 2 cut(s) | 568, 772 |
| FspBI | CTAG | 2 cut(s) | 1032, 1272 |
| GlaI | GCGC | 2 cut(s) | 95, 555 |
| GsaI | CCCAGC | 1 cut(s) | 344 |
| GsuI | CTGGAG | 1 cut(s) | 1061 |
| HaeIII | GGCC | 8 cut(s) | 39, 233, 251, 257, 287, 560, 675, 1255 |
| HgaI | GACGC | 1 cut(s) | 1058 |
| HhaI | GCGC | 2 cut(s) | 96, 556 |
| Hin1I | GRCGYC | 1 cut(s) | 195 |
| Hin1II | CATG | 8 cut(s) | 674, 701, 764, 789, 1198, 1203, 1301, 1405 |
| Hin6I | GCGC | 2 cut(s) | 94, 554 |
| HinP1I | GCGC | 2 cut(s) | 94, 554 |
| HincII | GTYRAC | 1 cut(s) | 1014 |
| HindII | GTYRAC | 1 cut(s) | 1014 |
| HindIII | AAGCTT | 2 cut(s) | 9, 1394 |
| HinfI | GANTC | 5 cut(s) | 176, 382, 631, 959, 1310 |
| HpaI | GTTAAC | 1 cut(s) | 1014 |
| HphI | GGTGA | 5 cut(s) | 57, 292, 481, 626, 767 |
| Hpy166II | GTNNAC | 1 cut(s) | 1014 |
| Hpy188III | TCNNGA | 7 cut(s) | 15, 386, 732, 761, 824, 1032, 1314 |
| Hpy8I | GTNNAC | 1 cut(s) | 1014 |
| Hpy99I | CGWCG | 3 cut(s) | 197, 200, 293 |
| HpyAV | CCTTC | 1 cut(s) | 686 |
| HpyCH4III | ACNGT | 2 cut(s) | 315, 1080 |
| HpyCH4IV | ACGT | 3 cut(s) | 195, 351, 889 |
| HpyCH4V | TGCA | 8 cut(s) | 455, 650, 806, 881, 1059, 1203, 1325, 1345 |
| HpyF3I | CTNAG | 9 cut(s) | 519, 589, 627, 825, 1166, 1177, 1221, 1226, 1257 |
| HpySE526I | ACGT | 3 cut(s) | 195, 351, 889 |
| Hsp92I | GRCGYC | 1 cut(s) | 195 |
| Hsp92II | CATG | 8 cut(s) | 674, 701, 764, 789, 1198, 1203, 1301, 1405 |
| HspAI | GCGC | 2 cut(s) | 94, 554 |
| KpnI | GGTACC | 1 cut(s) | 529 |
| Ksp22I | TGATCA | 1 cut(s) | 757 |
| KspAI | GTTAAC | 1 cut(s) | 1014 |
| KspI | CCGCGG | 1 cut(s) | 285 |
| Kzo9I | GATC | 9 cut(s) | 102, 202, 585, 680, 734, 757, 782, 1316, 1376 |
| LmnI | GCTCC | 3 cut(s) | 368, 790, 1246 |
| Lsp1109I | GCAGC | 6 cut(s) | 39, 229, 265, 318, 410, 893 |
| MabI | ACCWGGT | 1 cut(s) | 640 |
| MaeI | CTAG | 2 cut(s) | 1032, 1272 |
| MaeII | ACGT | 3 cut(s) | 195, 351, 889 |
| MaeIII | GTNAC | 2 cut(s) | 1160, 1412 |
| MalI | GATC | 9 cut(s) | 104, 204, 587, 682, 736, 759, 784, 1318, 1378 |
| MboI | GATC | 9 cut(s) | 102, 202, 585, 680, 734, 757, 782, 1316, 1376 |
| MboII | GAAGA | 9 cut(s) | 520, 615, 823, 847, 892, 984, 1058, 1089, 1203 |
| MflI | RGATCY | 3 cut(s) | 102, 585, 1376 |
| MhlI | GDGCHC | 3 cut(s) | 568, 772, 1243 |
| MluCI | AATT | 3 cut(s) | 662, 1025, 1111 |
| MlyI | GAGTC | 2 cut(s) | 185, 953 |
| MseI | TTAA | 2 cut(s) | 458, 1013 |
| MslI | CAYNNNNRTG | 1 cut(s) | 224 |
| MspA1I | CMGCKG | 7 cut(s) | 170, 242, 260, 284, 309, 344, 532 |
| MspR9I | CCNGG | 4 cut(s) | 642, 685, 798, 1374 |
| Mva1269I | GAATGC | 2 cut(s) | 1052, 1345 |
| MvaI | CCWGG | 4 cut(s) | 642, 685, 798, 1374 |
| MvnI | CGCG | 3 cut(s) | 236, 284, 387 |
| NdeII | GATC | 9 cut(s) | 102, 202, 585, 680, 734, 757, 782, 1316, 1376 |
| NlaIII | CATG | 8 cut(s) | 674, 701, 764, 789, 1198, 1203, 1301, 1405 |
| NlaIV | GGNNCC | 4 cut(s) | 23, 527, 581, 848 |
| NmeAIII | GCCGAG | 2 cut(s) | 15, 277 |
| NotI | GCGGCCGC | 1 cut(s) | 231 |
| NruI | TCGCGA | 1 cut(s) | 387 |
| NspI | RCATGY | 2 cut(s) | 1203, 1405 |
| PaeI | GCATGC | 2 cut(s) | 1203, 1405 |
| PaeR7I | CTCGAG | 1 cut(s) | 567 |
| PagI | TCATGA | 1 cut(s) | 760 |
| PceI | AGGCCT | 1 cut(s) | 1255 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 222 |
| PctI | GAATGC | 2 cut(s) | 1052, 1345 |
| PfeI | GAWTC | 3 cut(s) | 382, 631, 1310 |
| Pfl23II | CGTACG | 1 cut(s) | 348 |
| PflFI | GACNNNGTC | 2 cut(s) | 315, 845 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1379 |
| PfoI | TCCNGGA | 1 cut(s) | 683 |
| PleI | GAGTC | 2 cut(s) | 184, 953 |
| PpsI | GAGTC | 2 cut(s) | 184, 953 |
| PpuMI | RGGWCCY | 1 cut(s) | 847 |
| Psp124BI | GAGCTC | 2 cut(s) | 568, 772 |
| Psp5II | RGGWCCY | 1 cut(s) | 847 |
| Psp6I | CCWGG | 4 cut(s) | 640, 683, 796, 1372 |
| PspFI | CCCAGC | 1 cut(s) | 340 |
| PspGI | CCWGG | 4 cut(s) | 640, 683, 796, 1372 |
| PspLI | CGTACG | 1 cut(s) | 348 |
| PspN4I | GGNNCC | 4 cut(s) | 23, 527, 581, 848 |
| PspPI | GGNCC | 3 cut(s) | 579, 644, 847 |
| PspPPI | RGGWCCY | 1 cut(s) | 847 |
| PspXI | VCTCGAGB | 1 cut(s) | 567 |
| PstI | CTGCAG | 1 cut(s) | 808 |
| PstNI | CAGNNNCTG | 2 cut(s) | 803, 1379 |
| PsuI | RGATCY | 3 cut(s) | 102, 585, 1376 |
| PsyI | GACNNNGTC | 2 cut(s) | 315, 845 |
| PvuII | CAGCTG | 1 cut(s) | 242 |
| RruI | TCGCGA | 1 cut(s) | 387 |
| RsaI | GTAC | 5 cut(s) | 350, 527, 691, 1175, 1289 |
| RsaNI | GTAC | 5 cut(s) | 349, 526, 690, 1174, 1288 |
| RseI | CAYNNNNRTG | 1 cut(s) | 224 |
| SacI | GAGCTC | 2 cut(s) | 568, 772 |
| SacII | CCGCGG | 1 cut(s) | 285 |
| SaqAI | TTAA | 2 cut(s) | 458, 1013 |
| Sau3AI | GATC | 9 cut(s) | 102, 202, 585, 680, 734, 757, 782, 1316, 1376 |
| Sau96I | GGNCC | 3 cut(s) | 579, 644, 847 |
| SchI | GAGTC | 2 cut(s) | 185, 953 |
| ScrFI | CCNGG | 4 cut(s) | 642, 685, 798, 1374 |
| SduI | GDGCHC | 3 cut(s) | 568, 772, 1243 |
| SexAI | ACCWGGT | 1 cut(s) | 640 |
| SfcI | CTRYAG | 3 cut(s) | 118, 804, 1407 |
| Sfr274I | CTCGAG | 1 cut(s) | 567 |
| Sfr303I | CCGCGG | 1 cut(s) | 285 |
| SgrBI | CCGCGG | 1 cut(s) | 285 |
| SinI | GGWCC | 3 cut(s) | 579, 644, 847 |
| SlaI | CTCGAG | 1 cut(s) | 567 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 224 |
| SmlI | CTYRAG | 2 cut(s) | 567, 730 |
| SmoI | CTYRAG | 2 cut(s) | 567, 730 |
| SphI | GCATGC | 2 cut(s) | 1203, 1405 |
| Sse9I | AATT | 3 cut(s) | 662, 1025, 1111 |
| SseBI | AGGCCT | 1 cut(s) | 1255 |
| SspI | AATATT | 1 cut(s) | 546 |
| SspMI | CTAG | 2 cut(s) | 1032, 1272 |
| SstI | GAGCTC | 2 cut(s) | 568, 772 |
| StuI | AGGCCT | 1 cut(s) | 1255 |
| StyD4I | CCNGG | 4 cut(s) | 640, 683, 796, 1372 |
| TaaI | ACNGT | 2 cut(s) | 315, 1080 |
| TaiI | ACGT | 3 cut(s) | 198, 354, 892 |
| TaqI | TCGA | 5 cut(s) | 568, 679, 852, 858, 1154 |
| TasI | AATT | 3 cut(s) | 662, 1025, 1111 |
| TauI | GCSGC | 9 cut(s) | 233, 236, 260, 269, 272, 284, 287, 347, 419 |
| TfiI | GAWTC | 3 cut(s) | 382, 631, 1310 |
| Tru1I | TTAA | 2 cut(s) | 458, 1013 |
| Tru9I | TTAA | 2 cut(s) | 458, 1013 |
| TscAI | CASTG | 1 cut(s) | 813 |
| TseI | GCWGC | 6 cut(s) | 27, 242, 278, 306, 398, 881 |
| TspDTI | ATGAA | 3 cut(s) | 696, 714, 1286 |
| TspGWI | ACGGA | 1 cut(s) | 978 |
| TspRI | CASTG | 1 cut(s) | 813 |
| Tth111I | GACNNNGTC | 2 cut(s) | 315, 845 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1379 |
| VpaK11BI | GGWCC | 3 cut(s) | 579, 644, 847 |
| XapI | RAATTY | 2 cut(s) | 662, 1025 |
| XbaI | TCTAGA | 1 cut(s) | 1031 |
| XceI | RCATGY | 2 cut(s) | 1203, 1405 |
| XhoI | CTCGAG | 1 cut(s) | 567 |
| XspI | CTAG | 2 cut(s) | 1032, 1272 |
| ZraI | GACGTC | 1 cut(s) | 196 |