Rh7AG175400

iq-domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0010781
Physical Location & Seq
Reverse (-)
15385591 .. 15389621
4031 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG175400.1

Sequence Viewer

Length: 1440 bp
ATGGGCAAAGCTTCAAGATGGTTCCGCAGCGTTCTCGGCCTCAAAAAGTCCGATAAGACCCACAACAACAACAACAACTCCTCACCTTGTCCCAAACCGCCATCCACCAAGCGCAGATGGAGCTTTGTCAAGTCCTACAGAGAAAAAGACCACCCACACAATCACAACCACCAAACCGACCTCGCTGACGAGTCCTCCTCCGCTAACGACGTCGCTGATCCGAACAAGCATGCCATCGCCGTGGCGGCCGCGACAGCTGCCGTGGCCGAGGCCGCTGTTGCCGCCGCCCAAGCTGCCGCGGCCGTCGTCCGCCTCACCAGCAGCGGACGGTGTCCCAACAACAACAACAACAACCCAGCGGCGTACGTTAGCGGTGGCGGAGGAGGAAGCGTTGGGATTCGCGAGGAGTGTGCAGCTGTGAAAATCCAAGCGGCGTTCCGAGGCTGTTTGGCGAGGAGAGCATTGCGTGCGTTAAAAGGATTGGTGAGGCTTCAAGCTCTGGTTAGAGGTCATATTGAGAGGAAGAAGTGGGCTAAGCGGTACCAGCGGTTTCAAGCAATATTGCGAGCGCAGGCCAGAGCTCGAGCAGGGCGGACCCAGATCTCAGAGTTCTCACATTCACATTCAAGTTCCCAATCTTCTCAGATTCACCAACCTGGTCCTGCAACCCCTGAAAAATTTGAACATGGCCTTCGATCCAGGAGTACAAAACATGAACATTCATCAATACTTGGGAGAAATAGCTCAAGATCAAATGGTAGGATTGTTGGTGATCATGACAGAGCTCACTCTGAACGATCATGGGAGCAACCAGGGTCTGCAGTGAAGAATGGGACTCCTGAGGATGAGAAGAACGACAGGGTCCTCGAAATCGATACTGGGAAACCCCATATTGCAGCTAAACGTAGAAACCTCTTCCACAATACTCATCTCGCTTCAGACCAATACAGCCATAGCTTTACTACATCAAAGGACTCAACAACTCATCAGACACTTCCAAGTCCGTCTTCTTGTGAAGTCCAATCGTTAACCCCATTGAAATTCTCTAGAGAGCTGGAGGAAGACGCATTCTGCACAGCTAACAATAGCCCACAGTTTTATTCTGCTACTTCTTCAAGGGGTGGTAATTCAAAGAAAAGTCCTTTCACTCCCACAAAGAGCGATGGCTCGAAAAGTTACCTAAGTGGGTACTCAGATTACCCGAACTACATGGCATGCACTCAATCTTCAAAGGCTAAGCTGAGGTCACTTAGTGCTCCGAAGCAGAGGCCTCAGTATGAGAGGTCTAGTTCAGCAAAGAGGTACTCTGTTCATGGCTTTGGCGAATCAAGATCAAATGCACAAAGGAGTTCAGCCTTGCATTCAAACTTCACAAATAAAGCCTACCCAGGATCTGGTCGCTTGGACAAGCTTGGCATGCCTGTAGGTTACAGATACTAA

Protein Analysis

479

Amino Acids

52.45

Weight (kDa)

10.15

Isoelectric Point (pI)

63.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 363 - 448 4.1e-10 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010781)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23060
fragaria_vesca FvH4_5g01680 FvH4_5g01680 FvH4_5g01680
malus_domestica MD04G1065600.v1.1
prunus_persica Prupe.5G092600_v2.0.a1
pyrus_communis pycom04g05910 pycom06g07330
rosa_chinensis RchiOBHm_Chr7g0199041
rosa_laevigata RLG00000003820
rosa_multiflora Rmu_co8081240.1_g000001 Rmu_sc0006266.1_g000033 Rmu_sc0007328.1_g000001
rosa_roxburghii Rroxscaffold_3G00257190
rosa_rugosa Rorug07G0052200
rosa_samantha Rh7AG175400 Rh7BG178800 Rh7CG184600 Rh7DG178200
rosa_wichuraiana Rw7G015390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 213
Acc65I GGTACC 1 cut(s) 540
AccB1I GGYRCC 1 cut(s) 540
AccB7I CCANNNNNTGG 1 cut(s) 1394
AccII CGCG 3 cut(s) 251, 299, 402
AclWI GGATC 3 cut(s) 212, 690, 1399
AcoI YGGCCR 3 cut(s) 246, 264, 300
AcsI RAATTY 2 cut(s) 677, 1040
AcuI CTGAAG 1 cut(s) 921
AcyI GRCGYC 1 cut(s) 210
AdeI CACNNNGTG 1 cut(s) 1253
AfaI GTAC 5 cut(s) 365, 542, 706, 1190, 1304
AfiI CCNNNNNNNGG 1 cut(s) 1394
AjnI CCWGG 4 cut(s) 655, 698, 811, 1387
AjuI GAANNNNNNNTTGG 2 cut(s) 991, 1023
Alw21I GWGCWC 3 cut(s) 583, 787, 1258
AlwI GGATC 3 cut(s) 212, 690, 1399
AlwNI CAGNNNCTG 2 cut(s) 818, 1394
Ama87I CYCGRG 1 cut(s) 582
AoxI GGCC 8 cut(s) 37, 246, 264, 270, 300, 573, 688, 1268
ApeKI GCWGC 6 cut(s) 27, 257, 293, 321, 413, 896
ApoI RAATTY 2 cut(s) 677, 1040
Asp718I GGTACC 1 cut(s) 540
AspLEI GCGC 2 cut(s) 114, 571
AspS9I GGNCC 3 cut(s) 594, 659, 862
AsuHPI GGTGA 5 cut(s) 75, 307, 496, 641, 782
AvaI CYCGRG 1 cut(s) 582
AvaII GGWCC 3 cut(s) 594, 659, 862
AxyI CCTNAGG 1 cut(s) 840
BanI GGYRCC 1 cut(s) 540
BanII GRGCYC 2 cut(s) 583, 787
BbsI GAAGAC 2 cut(s) 999, 1068
Bbv12I GWGCWC 3 cut(s) 583, 787, 1258
BbvCI CCTCAGC 1 cut(s) 1241
BbvI GCAGC 6 cut(s) 39, 244, 280, 333, 425, 908
BccI CCATC 5 cut(s) 12, 109, 111, 242, 1157
BceAI ACGGC 3 cut(s) 224, 245, 287
BcgI CGANNNNNNTGC 4 cut(s) 16, 50, 392, 426
BciT130I CCWGG 4 cut(s) 657, 700, 813, 1389
BclI TGATCA 1 cut(s) 772
BfaI CTAG 2 cut(s) 1047, 1287
BfmI CTRYAG 3 cut(s) 136, 819, 1422
BglI GCCNNNNNGGC 1 cut(s) 245
BglII AGATCT 1 cut(s) 600
BlpI GCTNAGC 2 cut(s) 534, 1236
Bme1390I CCNGG 4 cut(s) 657, 700, 813, 1389
Bme18I GGWCC 3 cut(s) 594, 659, 862
BmeT110I CYCGRG 1 cut(s) 582
BmgT120I GGNCC 3 cut(s) 594, 659, 862
BmiI GGNNCC 4 cut(s) 23, 542, 596, 863
BmrFI CCNGG 4 cut(s) 657, 700, 813, 1389
BmrI ACTGGG 1 cut(s) 888
BmuI ACTGGG 1 cut(s) 888
BpiI GAAGAC 2 cut(s) 999, 1068
BplI GAGNNNNNCTC 2 cut(s) 182, 214
BpmI CTGGAG 1 cut(s) 1076
Bpu10I CCTNAGC 1 cut(s) 1241
Bpu1102I GCTNAGC 2 cut(s) 534, 1236
BpuEI CTTGAG 1 cut(s) 730
Bsa29I ATCGAT 1 cut(s) 873
BsaHI GRCGYC 1 cut(s) 210
BsaJI CCNNGG 7 cut(s) 240, 261, 267, 297, 439, 812, 1387
BsaXI ACNNNNNCTCC 6 cut(s) 62, 92, 179, 209, 375, 405
Bsc4I CCNNNNNNNGG 1 cut(s) 1394
Bse1I ACTGG 1 cut(s) 883
Bse21I CCTNAGG 1 cut(s) 840
Bse3DI GCAATG 1 cut(s) 461
BseBI CCWGG 4 cut(s) 657, 700, 813, 1389
BseCI ATCGAT 1 cut(s) 873
BseDI CCNNGG 7 cut(s) 240, 261, 267, 297, 439, 812, 1387
BseGI GGATG 2 cut(s) 101, 850
BseLI CCNNNNNNNGG 1 cut(s) 1394
BseMI GCAATG 1 cut(s) 461
BseMII CTCAG 6 cut(s) 618, 656, 831, 1206, 1232, 1286
BseNI ACTGG 1 cut(s) 883
BseRI GAGGAG 5 cut(s) 70, 187, 396, 419, 469
BseX3I CGGCCG 2 cut(s) 246, 300
BseXI GCAGC 6 cut(s) 39, 244, 280, 333, 425, 908
BseYI CCCAGC 1 cut(s) 355
BsgI GTGCAG 2 cut(s) 432, 1057
Bsh1236I CGCG 3 cut(s) 251, 299, 402
Bsh1285I CGRYCG 2 cut(s) 249, 303
BshFI GGCC 8 cut(s) 39, 248, 266, 272, 302, 575, 690, 1270
BshNI GGYRCC 1 cut(s) 540
BshVI ATCGAT 1 cut(s) 873
BsiEI CGRYCG 2 cut(s) 249, 303
BsiHKAI GWGCWC 3 cut(s) 583, 787, 1258
BsiHKCI CYCGRG 1 cut(s) 582
BsiWI CGTACG 1 cut(s) 363
BslFI GGGAC 3 cut(s) 75, 318, 847
BslI CCNNNNNNNGG 1 cut(s) 1394
BsmFI GGGAC 3 cut(s) 75, 318, 847
BsmI GAATGC 2 cut(s) 1067, 1360
BsnI GGCC 8 cut(s) 39, 248, 266, 272, 302, 575, 690, 1270
BsoBI CYCGRG 1 cut(s) 582
Bsp1286I GDGCHC 3 cut(s) 583, 787, 1258
Bsp143I GATC 8 cut(s) 217, 600, 695, 749, 772, 797, 1331, 1391
Bsp1720I GCTNAGC 2 cut(s) 534, 1236
Bsp68I TCGCGA 1 cut(s) 402
BspANI GGCC 8 cut(s) 39, 248, 266, 272, 302, 575, 690, 1270
BspCNI CTCAG 6 cut(s) 617, 655, 832, 1205, 1233, 1285
BspDI ATCGAT 1 cut(s) 873
BspFNI CGCG 3 cut(s) 251, 299, 402
BspHI TCATGA 1 cut(s) 775
BspLI GGNNCC 4 cut(s) 23, 542, 596, 863
BspMAI CTGCAG 1 cut(s) 823
BspPI GGATC 3 cut(s) 212, 690, 1399
BspT107I GGYRCC 1 cut(s) 540
BsrDI GCAATG 1 cut(s) 461
BsrI ACTGG 1 cut(s) 883
BssECI CCNNGG 7 cut(s) 240, 261, 267, 297, 439, 812, 1387
BssMI GATC 8 cut(s) 217, 600, 695, 749, 772, 797, 1331, 1391
BssNI GRCGYC 1 cut(s) 210
Bst2UI CCWGG 4 cut(s) 657, 700, 813, 1389
Bst4CI ACNGT 2 cut(s) 330, 1095
Bst6I CTCTTC 1 cut(s) 920
BstACI GRCGYC 1 cut(s) 210
BstAPI GCANNNNNTGC 1 cut(s) 467
BstC8I GCNNGC 6 cut(s) 231, 468, 567, 573, 1216, 1418
BstDSI CCRYGG 3 cut(s) 240, 261, 297
BstF5I GGATG 2 cut(s) 101, 850
BstFNI CGCG 3 cut(s) 251, 299, 402
BstHHI GCGC 2 cut(s) 114, 571
BstKTI GATC 8 cut(s) 220, 603, 698, 752, 775, 800, 1334, 1394
BstMBI GATC 8 cut(s) 217, 600, 695, 749, 772, 797, 1331, 1391
BstMCI CGRYCG 2 cut(s) 249, 303
BstNI CCWGG 4 cut(s) 657, 700, 813, 1389
BstNSI RCATGY 3 cut(s) 233, 1218, 1420
BstSCI CCNGG 4 cut(s) 655, 698, 811, 1387
BstSFI CTRYAG 3 cut(s) 136, 819, 1422
BstUI CGCG 3 cut(s) 251, 299, 402
BstV1I GCAGC 6 cut(s) 39, 244, 280, 333, 425, 908
BstV2I GAAGAC 2 cut(s) 999, 1068
BstX2I RGATCY 2 cut(s) 600, 1391
BstXI CCANNNNNNTGG 1 cut(s) 241
BstYI RGATCY 2 cut(s) 600, 1391
BstZI CGGCCG 2 cut(s) 246, 300
Bsu15I ATCGAT 1 cut(s) 873
Bsu36I CCTNAGG 1 cut(s) 840
BsuRI GGCC 8 cut(s) 39, 248, 266, 272, 302, 575, 690, 1270
BsuTUI ATCGAT 1 cut(s) 873
BtgI CCRYGG 3 cut(s) 240, 261, 297
BtgZI GCGATG 2 cut(s) 220, 1176
BtsCI GGATG 2 cut(s) 101, 850
BtsI GCAGTG 1 cut(s) 828
BtsIMutI CAGTG 1 cut(s) 828
BtuMI TCGCGA 1 cut(s) 402
Cac8I GCNNGC 6 cut(s) 231, 468, 567, 573, 1216, 1418
CaiI CAGNNNCTG 2 cut(s) 818, 1394
CciI TCATGA 1 cut(s) 775
CciNI GCGGCCGC 1 cut(s) 246
CfoI GCGC 2 cut(s) 114, 571
Cfr13I GGNCC 3 cut(s) 594, 659, 862
Cfr42I CCGCGG 1 cut(s) 300
ClaI ATCGAT 1 cut(s) 873
CseI GACGC 1 cut(s) 1073
CsiI ACCWGGT 1 cut(s) 655
Csp6I GTAC 5 cut(s) 364, 541, 705, 1189, 1303
CviAII CATG 9 cut(s) 230, 686, 713, 776, 801, 1210, 1215, 1313, 1417
CviQI GTAC 5 cut(s) 364, 541, 705, 1189, 1303
DpnI GATC 8 cut(s) 219, 602, 697, 751, 774, 799, 1333, 1393
DpnII GATC 8 cut(s) 217, 600, 695, 749, 772, 797, 1331, 1391
DraIII CACNNNGTG 1 cut(s) 1253
EaeI YGGCCR 3 cut(s) 246, 264, 300
EagI CGGCCG 2 cut(s) 246, 300
Eam1104I CTCTTC 1 cut(s) 920
EarI CTCTTC 1 cut(s) 920
EciI GGCGGA 3 cut(s) 299, 393, 607
Ecl136II GAGCTC 2 cut(s) 581, 785
EclXI CGGCCG 2 cut(s) 246, 300
Eco147I AGGCCT 1 cut(s) 1270
Eco24I GRGCYC 2 cut(s) 583, 787
Eco47I GGWCC 3 cut(s) 594, 659, 862
Eco52I CGGCCG 2 cut(s) 246, 300
Eco53kI GAGCTC 2 cut(s) 581, 785
Eco57I CTGAAG 1 cut(s) 921
Eco81I CCTNAGG 1 cut(s) 840
Eco88I CYCGRG 1 cut(s) 582
EcoICRI GAGCTC 2 cut(s) 581, 785
EcoO109I RGGNCCY 1 cut(s) 862
EcoRII CCWGG 4 cut(s) 655, 698, 811, 1387
EcoT38I GRGCYC 2 cut(s) 583, 787
FaeI CATG 9 cut(s) 233, 689, 716, 779, 804, 1213, 1218, 1316, 1420
FalI AAGNNNNNCTT 2 cut(s) 991, 1023
FaqI GGGAC 3 cut(s) 75, 318, 847
FatI CATG 9 cut(s) 229, 685, 712, 775, 800, 1209, 1214, 1312, 1416
FbaI TGATCA 1 cut(s) 772
FokI GGATG 2 cut(s) 88, 857
FriOI GRGCYC 2 cut(s) 583, 787
FspBI CTAG 2 cut(s) 1047, 1287
GlaI GCGC 2 cut(s) 113, 570
GsaI CCCAGC 1 cut(s) 359
GsuI CTGGAG 1 cut(s) 1076
HaeIII GGCC 8 cut(s) 39, 248, 266, 272, 302, 575, 690, 1270
HgaI GACGC 1 cut(s) 1073
HhaI GCGC 2 cut(s) 114, 571
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 9 cut(s) 233, 689, 716, 779, 804, 1213, 1218, 1316, 1420
Hin6I GCGC 2 cut(s) 112, 569
HinP1I GCGC 2 cut(s) 112, 569
HincII GTYRAC 1 cut(s) 1029
HindII GTYRAC 1 cut(s) 1029
HindIII AAGCTT 2 cut(s) 9, 1409
HinfI GANTC 6 cut(s) 191, 397, 646, 835, 974, 1325
HpaI GTTAAC 1 cut(s) 1029
HphI GGTGA 5 cut(s) 75, 307, 496, 641, 782
Hpy166II GTNNAC 1 cut(s) 1029
Hpy188III TCNNGA 7 cut(s) 15, 401, 747, 776, 839, 1047, 1329
Hpy8I GTNNAC 1 cut(s) 1029
Hpy99I CGWCG 3 cut(s) 212, 215, 308
HpyAV CCTTC 1 cut(s) 701
HpyCH4III ACNGT 2 cut(s) 330, 1095
HpyCH4IV ACGT 3 cut(s) 210, 366, 904
HpyCH4V TGCA 8 cut(s) 413, 665, 821, 896, 1074, 1218, 1340, 1360
HpySE526I ACGT 3 cut(s) 210, 366, 904
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 9 cut(s) 233, 689, 716, 779, 804, 1213, 1218, 1316, 1420
HspAI GCGC 2 cut(s) 112, 569
KpnI GGTACC 1 cut(s) 544
Ksp22I TGATCA 1 cut(s) 772
KspAI GTTAAC 1 cut(s) 1029
KspI CCGCGG 1 cut(s) 300
Kzo9I GATC 8 cut(s) 217, 600, 695, 749, 772, 797, 1331, 1391
LmnI GCTCC 3 cut(s) 120, 805, 1261
Lsp1109I GCAGC 6 cut(s) 39, 244, 280, 333, 425, 908
MabI ACCWGGT 1 cut(s) 655
MaeI CTAG 2 cut(s) 1047, 1287
MaeII ACGT 3 cut(s) 210, 366, 904
MaeIII GTNAC 3 cut(s) 1175, 1245, 1427
MalI GATC 8 cut(s) 219, 602, 697, 751, 774, 799, 1333, 1393
MboI GATC 8 cut(s) 217, 600, 695, 749, 772, 797, 1331, 1391
MboII GAAGA 9 cut(s) 535, 630, 838, 862, 907, 999, 1073, 1104, 1218
MflI RGATCY 2 cut(s) 600, 1391
MhlI GDGCHC 3 cut(s) 583, 787, 1258
MluCI AATT 3 cut(s) 677, 1040, 1126
MlyI GAGTC 3 cut(s) 200, 829, 968
MseI TTAA 2 cut(s) 473, 1028
MslI CAYNNNNRTG 1 cut(s) 239
MspA1I CMGCKG 7 cut(s) 257, 275, 299, 324, 359, 416, 547
MspR9I CCNGG 4 cut(s) 657, 700, 813, 1389
Mva1269I GAATGC 2 cut(s) 1067, 1360
MvaI CCWGG 4 cut(s) 657, 700, 813, 1389
MvnI CGCG 3 cut(s) 251, 299, 402
NdeII GATC 8 cut(s) 217, 600, 695, 749, 772, 797, 1331, 1391
NlaIII CATG 9 cut(s) 233, 689, 716, 779, 804, 1213, 1218, 1316, 1420
NlaIV GGNNCC 4 cut(s) 23, 542, 596, 863
NmeAIII GCCGAG 2 cut(s) 15, 292
NmuCI GTSAC 1 cut(s) 1245
NotI GCGGCCGC 1 cut(s) 246
NruI TCGCGA 1 cut(s) 402
NspI RCATGY 3 cut(s) 233, 1218, 1420
PaeI GCATGC 3 cut(s) 233, 1218, 1420
PaeR7I CTCGAG 1 cut(s) 582
PagI TCATGA 1 cut(s) 775
PceI AGGCCT 1 cut(s) 1270
PctI GAATGC 2 cut(s) 1067, 1360
PfeI GAWTC 3 cut(s) 397, 646, 1325
Pfl23II CGTACG 1 cut(s) 363
PflFI GACNNNGTC 2 cut(s) 330, 860
PflMI CCANNNNNTGG 1 cut(s) 1394
PfoI TCCNGGA 1 cut(s) 698
PleI GAGTC 3 cut(s) 199, 829, 968
PpsI GAGTC 3 cut(s) 199, 829, 968
PpuMI RGGWCCY 1 cut(s) 862
Psp124BI GAGCTC 2 cut(s) 583, 787
Psp5II RGGWCCY 1 cut(s) 862
Psp6I CCWGG 4 cut(s) 655, 698, 811, 1387
PspFI CCCAGC 1 cut(s) 355
PspGI CCWGG 4 cut(s) 655, 698, 811, 1387
PspLI CGTACG 1 cut(s) 363
PspN4I GGNNCC 4 cut(s) 23, 542, 596, 863
PspPI GGNCC 3 cut(s) 594, 659, 862
PspPPI RGGWCCY 1 cut(s) 862
PspXI VCTCGAGB 1 cut(s) 582
PstI CTGCAG 1 cut(s) 823
PstNI CAGNNNCTG 2 cut(s) 818, 1394
PsuI RGATCY 2 cut(s) 600, 1391
PsyI GACNNNGTC 2 cut(s) 330, 860
PvuII CAGCTG 2 cut(s) 257, 416
RruI TCGCGA 1 cut(s) 402
RsaI GTAC 5 cut(s) 365, 542, 706, 1190, 1304
RsaNI GTAC 5 cut(s) 364, 541, 705, 1189, 1303
RseI CAYNNNNRTG 1 cut(s) 239
SacI GAGCTC 2 cut(s) 583, 787
SacII CCGCGG 1 cut(s) 300
SaqAI TTAA 2 cut(s) 473, 1028
Sau3AI GATC 8 cut(s) 217, 600, 695, 749, 772, 797, 1331, 1391
Sau96I GGNCC 3 cut(s) 594, 659, 862
SchI GAGTC 3 cut(s) 200, 829, 968
ScrFI CCNGG 4 cut(s) 657, 700, 813, 1389
SduI GDGCHC 3 cut(s) 583, 787, 1258
SexAI ACCWGGT 1 cut(s) 655
SfcI CTRYAG 3 cut(s) 136, 819, 1422
Sfr274I CTCGAG 1 cut(s) 582
Sfr303I CCGCGG 1 cut(s) 300
SgrBI CCGCGG 1 cut(s) 300
SinI GGWCC 3 cut(s) 594, 659, 862
SlaI CTCGAG 1 cut(s) 582
SmiMI CAYNNNNRTG 1 cut(s) 239
SmlI CTYRAG 2 cut(s) 582, 745
SmoI CTYRAG 2 cut(s) 582, 745
SphI GCATGC 3 cut(s) 233, 1218, 1420
Sse9I AATT 3 cut(s) 677, 1040, 1126
SseBI AGGCCT 1 cut(s) 1270
SspI AATATT 1 cut(s) 561
SspMI CTAG 2 cut(s) 1047, 1287
SstI GAGCTC 2 cut(s) 583, 787
StuI AGGCCT 1 cut(s) 1270
StyD4I CCNGG 4 cut(s) 655, 698, 811, 1387
TaaI ACNGT 2 cut(s) 330, 1095
TaiI ACGT 3 cut(s) 213, 369, 907
TaqI TCGA 5 cut(s) 583, 694, 867, 873, 1169
TasI AATT 3 cut(s) 677, 1040, 1126
TatI WGTACW 1 cut(s) 704
TauI GCSGC 9 cut(s) 248, 251, 275, 284, 287, 299, 302, 362, 434
TfiI GAWTC 3 cut(s) 397, 646, 1325
Tru1I TTAA 2 cut(s) 473, 1028
Tru9I TTAA 2 cut(s) 473, 1028
TscAI CASTG 1 cut(s) 828
TseFI GTSAC 1 cut(s) 1245
TseI GCWGC 6 cut(s) 27, 257, 293, 321, 413, 896
Tsp45I GTSAC 1 cut(s) 1245
TspDTI ATGAA 3 cut(s) 711, 729, 1301
TspGWI ACGGA 1 cut(s) 993
TspRI CASTG 1 cut(s) 828
Tth111I GACNNNGTC 2 cut(s) 330, 860
Van91I CCANNNNNTGG 1 cut(s) 1394
VpaK11BI GGWCC 3 cut(s) 594, 659, 862
XapI RAATTY 2 cut(s) 677, 1040
XbaI TCTAGA 1 cut(s) 1046
XceI RCATGY 3 cut(s) 233, 1218, 1420
XhoI CTCGAG 1 cut(s) 582
XspI CTAG 2 cut(s) 1047, 1287
ZraI GACGTC 1 cut(s) 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.