RchiOBHm_Chr7g0199041

iq-domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0010781
Physical Location & Seq
Reverse (-)
17060291 .. 17064297
4007 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17811

Sequence Viewer

Length: 1611 bp
ATGAAAATCTCAACCGTACATATTCCGTCGCTTTTATTACTCACTCCCTCAAACATTTCACCACTTCTTCCTCTCTCTCTGCGTAACTCCAAATGCCTCCCCATACCCAAACTCAAACCCACTCCCTCAAACTCAAACAACTCCCACCTCACCACCACCAACCCTGACCTCCCTCCCTCCCAGATGGGCAAAGCTTCAAGATGGTTCCGCAGCGTTCTCGGCCTCAAAAAGTCCCACAACAACTCCTCACCTTGTCCCAAACCGCCATCCACCAAGCGCAGATGGATCTTTGTCAAGTCCTACAGAGAAAAAGACCACCCACACAATCACAACCACCACCAAACCGACCCCGCTGACGAGTCCTCCTCCGCTAACGACGTCGCTGATCCGAACAAGCATGCCATCGCCGTGGCGGCCGCGACAGCTGCCGTGGCCGAGGCCGCTGTTGCCGCCGCCCAAGCTGCCGCGGCCGTCGTCCGCCTCACCAGCAGCGGACGGTGTCCCAACAACAACAACAACAACAACCCAGCGGCGTACGCTAGCGGTGGCGGAGGAGGAAGCGTTGGGATTCGCGAGGAGTTGGCAGCCGTGAAAATCCAAGCGGCGTTCCGAGGCTGTTTGGCGAGGAGAGCATTGCGTGCATTAAAAGGATTGGTGAGGCTTCAAGCTCTGGTTAGAGGTCATATTGAGAGGAAGAAGTGGGCTAAGCGGTACCAGCGGTTTCAAGCAATATTGAGAGCACAGGCCAGAGCTCGATCAGGGCGGACCCAGATCTCAGAGTTCTCACATTCACATTCAAGTTCCCAATCTTCTCAGATTCACCAACCTGGTCCTGCAACCCCGGAAAAATTTGAACATGGCCTTCGATCCAGGAGTACAAAACATGAACATTCATCAATACTTGGGAGAAATAGCTCAAGATCAAATGGTAGGATTATTGGTGATCATGACAGAGCTCACTCGGAACGATCATGGGAGCAACCAGGGTCTGCAGTGAAGAATGGCACTCCTGAGGATGAGAAGAACGACAGGGTCCTCGAAATCGATACTGGGAAACCCCATATTGCAGCTAAACGTAGAAACCTCTTCCACTCTACTCATCTCACTTCAGACCAATACAGCCATAGCTTTACTACATCAAAGGACTCAACAACTCATCAGACACTTCCAAGTCCGTCTTCTTGTGAAGTCCAATCGTTAACCCCATTGAAATTCTCTAGAGATCTGGAGGAAGACGCATTCTGCACAGCTAACAATAGCCCACAGTTTTATTCTGCTACTTCTTCAAGGGGTGGTAATTCAAAGAAAAGTCCTTTCACTCCCACAAAGAGCGATGGCTCGAAAAGTTACCTAAGTGGGTACTCAGATTACCCGAACTACATGGCATGCACTCAATCTTCAAAGGCTAAGCTGAGGTCACTTAGTGCTCCGAAGCAGAGGCCTCAGTATGAGAGGTCTAGTTCAGCAAAGAGGTACTCTGTTCATGGCTTTGGCGAATCAAGATCAAATGCACAAAGGAGTTCAGCCTTGCATTCAAACTTCACAAATAAAGCCTACCCAGGATCTGGTCGCTTGGACAAGCTTGGCATGCCTGTAGGTTACAGATACTAA

Protein Analysis

536

Amino Acids

58.59

Weight (kDa)

10.22

Isoelectric Point (pI)

63.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 420 - 505 3.3e-09 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010781)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23060
fragaria_vesca FvH4_5g01680 FvH4_5g01680 FvH4_5g01680
malus_domestica MD04G1065600.v1.1
prunus_persica Prupe.5G092600_v2.0.a1
pyrus_communis pycom04g05910 pycom06g07330
rosa_chinensis RchiOBHm_Chr7g0199041
rosa_laevigata RLG00000003820
rosa_multiflora Rmu_co8081240.1_g000001 Rmu_sc0006266.1_g000033 Rmu_sc0007328.1_g000001
rosa_roxburghii Rroxscaffold_3G00257190
rosa_rugosa Rorug07G0052200
rosa_samantha Rh7AG175400 Rh7BG178800 Rh7CG184600 Rh7DG178200
rosa_wichuraiana Rw7G015390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 381
Acc65I GGTACC 1 cut(s) 711
AccB1I GGYRCC 1 cut(s) 711
AccB7I CCANNNNNTGG 1 cut(s) 1565
AccII CGCG 3 cut(s) 419, 467, 573
AclWI GGATC 4 cut(s) 293, 380, 861, 1570
AcoI YGGCCR 3 cut(s) 414, 432, 468
AcsI RAATTY 2 cut(s) 848, 1211
AcuI CTGAAG 1 cut(s) 1092
AcyI GRCGYC 1 cut(s) 378
AdeI CACNNNGTG 1 cut(s) 1424
AfaI GTAC 6 cut(s) 18, 536, 713, 877, 1361, 1475
AfiI CCNNNNNNNGG 1 cut(s) 1565
AjnI CCWGG 4 cut(s) 826, 869, 982, 1558
AjuI GAANNNNNNNTTGG 2 cut(s) 1162, 1194
Alw21I GWGCWC 4 cut(s) 742, 754, 958, 1429
AlwI GGATC 4 cut(s) 293, 380, 861, 1570
AlwNI CAGNNNCTG 2 cut(s) 989, 1565
AoxI GGCC 8 cut(s) 220, 414, 432, 438, 468, 744, 859, 1439
ApeKI GCWGC 6 cut(s) 210, 425, 461, 489, 584, 1067
ApoI RAATTY 2 cut(s) 848, 1211
Asp718I GGTACC 1 cut(s) 711
AspLEI GCGC 1 cut(s) 279
AspS9I GGNCC 3 cut(s) 765, 830, 1033
AsuC2I CCSGG 1 cut(s) 842
AsuHPI GGTGA 7 cut(s) 51, 142, 240, 475, 667, 812, 953
AsuNHI GCTAGC 1 cut(s) 539
AvaII GGWCC 3 cut(s) 765, 830, 1033
AxyI CCTNAGG 1 cut(s) 1011
BanI GGYRCC 1 cut(s) 711
BanII GRGCYC 2 cut(s) 754, 958
BbsI GAAGAC 2 cut(s) 1170, 1239
Bbv12I GWGCWC 4 cut(s) 742, 754, 958, 1429
BbvCI CCTCAGC 1 cut(s) 1412
BbvI GCAGC 6 cut(s) 222, 412, 448, 501, 596, 1079
BccI CCATC 6 cut(s) 178, 195, 274, 276, 410, 1328
BceAI ACGGC 4 cut(s) 392, 413, 455, 572
BcgI CGANNNNNNTGC 2 cut(s) 199, 233
BciT130I CCWGG 4 cut(s) 828, 871, 984, 1560
BclI TGATCA 1 cut(s) 943
BcnI CCSGG 1 cut(s) 842
BfaI CTAG 3 cut(s) 540, 1218, 1458
BfmI CTRYAG 3 cut(s) 301, 990, 1593
BglI GCCNNNNNGGC 1 cut(s) 413
BglII AGATCT 2 cut(s) 771, 1222
BlpI GCTNAGC 2 cut(s) 705, 1407
Bme1390I CCNGG 5 cut(s) 828, 842, 871, 984, 1560
Bme18I GGWCC 3 cut(s) 765, 830, 1033
BmgT120I GGNCC 3 cut(s) 765, 830, 1033
BmiI GGNNCC 4 cut(s) 206, 713, 767, 1034
BmrFI CCNGG 5 cut(s) 828, 842, 871, 984, 1560
BmrI ACTGGG 1 cut(s) 1059
BmtI GCTAGC 1 cut(s) 543
BmuI ACTGGG 1 cut(s) 1059
BpiI GAAGAC 2 cut(s) 1170, 1239
BplI GAGNNNNNCTC 2 cut(s) 350, 382
BpmI CTGGAG 1 cut(s) 1247
Bpu10I CCTNAGC 1 cut(s) 1412
Bpu1102I GCTNAGC 2 cut(s) 705, 1407
BpuEI CTTGAG 1 cut(s) 901
BpuMI CCSGG 1 cut(s) 842
Bsa29I ATCGAT 1 cut(s) 1044
BsaHI GRCGYC 1 cut(s) 378
BsaJI CCNNGG 8 cut(s) 408, 429, 435, 465, 610, 840, 983, 1558
BsaXI ACNNNNNCTCC 6 cut(s) 227, 257, 347, 377, 546, 576
Bsc4I CCNNNNNNNGG 1 cut(s) 1565
Bse1I ACTGG 1 cut(s) 1054
Bse21I CCTNAGG 1 cut(s) 1011
Bse3DI GCAATG 1 cut(s) 632
BseBI CCWGG 4 cut(s) 828, 871, 984, 1560
BseCI ATCGAT 1 cut(s) 1044
BseDI CCNNGG 8 cut(s) 408, 429, 435, 465, 610, 840, 983, 1558
BseGI GGATG 2 cut(s) 266, 1021
BseLI CCNNNNNNNGG 1 cut(s) 1565
BseMI GCAATG 1 cut(s) 632
BseMII CTCAG 6 cut(s) 789, 827, 1002, 1377, 1403, 1457
BseNI ACTGG 1 cut(s) 1054
BseRI GAGGAG 5 cut(s) 235, 355, 567, 590, 640
BseX3I CGGCCG 2 cut(s) 414, 468
BseXI GCAGC 6 cut(s) 222, 412, 448, 501, 596, 1079
BseYI CCCAGC 1 cut(s) 526
BsgI GTGCAG 1 cut(s) 1228
Bsh1236I CGCG 3 cut(s) 419, 467, 573
Bsh1285I CGRYCG 2 cut(s) 417, 471
BshFI GGCC 8 cut(s) 222, 416, 434, 440, 470, 746, 861, 1441
BshNI GGYRCC 1 cut(s) 711
BshVI ATCGAT 1 cut(s) 1044
BsiEI CGRYCG 2 cut(s) 417, 471
BsiHKAI GWGCWC 4 cut(s) 742, 754, 958, 1429
BsiSI CCGG 1 cut(s) 842
BsiWI CGTACG 1 cut(s) 534
BslFI GGGAC 3 cut(s) 217, 240, 486
BslI CCNNNNNNNGG 1 cut(s) 1565
BsmFI GGGAC 3 cut(s) 217, 240, 486
BsmI GAATGC 2 cut(s) 1238, 1531
BsnI GGCC 8 cut(s) 222, 416, 434, 440, 470, 746, 861, 1441
Bsp1286I GDGCHC 4 cut(s) 742, 754, 958, 1429
Bsp1720I GCTNAGC 2 cut(s) 705, 1407
Bsp68I TCGCGA 1 cut(s) 573
BspANI GGCC 8 cut(s) 222, 416, 434, 440, 470, 746, 861, 1441
BspCNI CTCAG 6 cut(s) 788, 826, 1003, 1376, 1404, 1456
BspDI ATCGAT 1 cut(s) 1044
BspFNI CGCG 3 cut(s) 419, 467, 573
BspHI TCATGA 1 cut(s) 946
BspLI GGNNCC 4 cut(s) 206, 713, 767, 1034
BspMAI CTGCAG 1 cut(s) 994
BspOI GCTAGC 1 cut(s) 543
BspPI GGATC 4 cut(s) 293, 380, 861, 1570
BspT107I GGYRCC 1 cut(s) 711
BsrDI GCAATG 1 cut(s) 632
BsrI ACTGG 1 cut(s) 1054
BssECI CCNNGG 8 cut(s) 408, 429, 435, 465, 610, 840, 983, 1558
BssNI GRCGYC 1 cut(s) 378
Bst2UI CCWGG 4 cut(s) 828, 871, 984, 1560
Bst4CI ACNGT 3 cut(s) 16, 498, 1266
Bst6I CTCTTC 1 cut(s) 1091
BstACI GRCGYC 1 cut(s) 378
BstAPI GCANNNNNTGC 1 cut(s) 638
BstC8I GCNNGC 5 cut(s) 399, 541, 639, 1387, 1589
BstDSI CCRYGG 3 cut(s) 408, 429, 465
BstF5I GGATG 2 cut(s) 266, 1021
BstFNI CGCG 3 cut(s) 419, 467, 573
BstHHI GCGC 1 cut(s) 279
BstMCI CGRYCG 2 cut(s) 417, 471
BstNI CCWGG 4 cut(s) 828, 871, 984, 1560
BstNSI RCATGY 3 cut(s) 401, 1389, 1591
BstSCI CCNGG 5 cut(s) 826, 840, 869, 982, 1558
BstSFI CTRYAG 3 cut(s) 301, 990, 1593
BstUI CGCG 3 cut(s) 419, 467, 573
BstV1I GCAGC 6 cut(s) 222, 412, 448, 501, 596, 1079
BstV2I GAAGAC 2 cut(s) 1170, 1239
BstX2I RGATCY 4 cut(s) 285, 771, 1222, 1562
BstXI CCANNNNNNTGG 1 cut(s) 409
BstYI RGATCY 4 cut(s) 285, 771, 1222, 1562
BstZI CGGCCG 2 cut(s) 414, 468
Bsu15I ATCGAT 1 cut(s) 1044
Bsu36I CCTNAGG 1 cut(s) 1011
BsuRI GGCC 8 cut(s) 222, 416, 434, 440, 470, 746, 861, 1441
BsuTUI ATCGAT 1 cut(s) 1044
BtgI CCRYGG 3 cut(s) 408, 429, 465
BtgZI GCGATG 2 cut(s) 388, 1347
BtsCI GGATG 2 cut(s) 266, 1021
BtsI GCAGTG 1 cut(s) 999
BtsIMutI CAGTG 1 cut(s) 999
BtuMI TCGCGA 1 cut(s) 573
Cac8I GCNNGC 5 cut(s) 399, 541, 639, 1387, 1589
CaiI CAGNNNCTG 2 cut(s) 989, 1565
CciI TCATGA 1 cut(s) 946
CciNI GCGGCCGC 1 cut(s) 414
CfoI GCGC 1 cut(s) 279
Cfr13I GGNCC 3 cut(s) 765, 830, 1033
Cfr42I CCGCGG 1 cut(s) 468
ClaI ATCGAT 1 cut(s) 1044
CseI GACGC 1 cut(s) 1244
CsiI ACCWGGT 1 cut(s) 826
Csp6I GTAC 6 cut(s) 17, 535, 712, 876, 1360, 1474
CviAII CATG 9 cut(s) 398, 857, 884, 947, 972, 1381, 1386, 1484, 1588
CviQI GTAC 6 cut(s) 17, 535, 712, 876, 1360, 1474
DraIII CACNNNGTG 1 cut(s) 1424
EaeI YGGCCR 3 cut(s) 414, 432, 468
EagI CGGCCG 2 cut(s) 414, 468
Eam1104I CTCTTC 1 cut(s) 1091
EarI CTCTTC 1 cut(s) 1091
EciI GGCGGA 3 cut(s) 467, 564, 778
Ecl136II GAGCTC 2 cut(s) 752, 956
EclXI CGGCCG 2 cut(s) 414, 468
Eco147I AGGCCT 1 cut(s) 1441
Eco24I GRGCYC 2 cut(s) 754, 958
Eco47I GGWCC 3 cut(s) 765, 830, 1033
Eco52I CGGCCG 2 cut(s) 414, 468
Eco53kI GAGCTC 2 cut(s) 752, 956
Eco57I CTGAAG 1 cut(s) 1092
Eco81I CCTNAGG 1 cut(s) 1011
EcoICRI GAGCTC 2 cut(s) 752, 956
EcoO109I RGGNCCY 1 cut(s) 1033
EcoRII CCWGG 4 cut(s) 826, 869, 982, 1558
EcoT38I GRGCYC 2 cut(s) 754, 958
FaeI CATG 9 cut(s) 401, 860, 887, 950, 975, 1384, 1389, 1487, 1591
FalI AAGNNNNNCTT 2 cut(s) 1162, 1194
FaqI GGGAC 3 cut(s) 217, 240, 486
FatI CATG 9 cut(s) 397, 856, 883, 946, 971, 1380, 1385, 1483, 1587
FauI CCCGC 1 cut(s) 358
FbaI TGATCA 1 cut(s) 943
FokI GGATG 2 cut(s) 253, 1028
FriOI GRGCYC 2 cut(s) 754, 958
FspBI CTAG 3 cut(s) 540, 1218, 1458
GlaI GCGC 1 cut(s) 278
GsaI CCCAGC 1 cut(s) 530
GsuI CTGGAG 1 cut(s) 1247
HaeIII GGCC 8 cut(s) 222, 416, 434, 440, 470, 746, 861, 1441
HapII CCGG 1 cut(s) 842
HgaI GACGC 1 cut(s) 1244
HhaI GCGC 1 cut(s) 279
Hin1I GRCGYC 1 cut(s) 378
Hin1II CATG 9 cut(s) 401, 860, 887, 950, 975, 1384, 1389, 1487, 1591
Hin6I GCGC 1 cut(s) 277
HinP1I GCGC 1 cut(s) 277
HincII GTYRAC 1 cut(s) 1200
HindII GTYRAC 1 cut(s) 1200
HindIII AAGCTT 2 cut(s) 192, 1580
HinfI GANTC 5 cut(s) 359, 568, 817, 1145, 1496
HpaI GTTAAC 1 cut(s) 1200
HpaII CCGG 1 cut(s) 842
HphI GGTGA 7 cut(s) 51, 142, 240, 475, 667, 812, 953
Hpy166II GTNNAC 1 cut(s) 1200
Hpy188I TCNGA 9 cut(s) 390, 611, 778, 816, 964, 1111, 1161, 1366, 1431
Hpy188III TCNNGA 8 cut(s) 198, 572, 918, 947, 1010, 1218, 1226, 1500
Hpy8I GTNNAC 1 cut(s) 1200
Hpy99I CGWCG 4 cut(s) 31, 380, 383, 476
HpyAV CCTTC 1 cut(s) 872
HpyCH4III ACNGT 3 cut(s) 16, 498, 1266
HpyCH4IV ACGT 2 cut(s) 378, 1075
HpyCH4V TGCA 8 cut(s) 641, 836, 992, 1067, 1245, 1389, 1511, 1531
HpySE526I ACGT 2 cut(s) 378, 1075
Hsp92I GRCGYC 1 cut(s) 378
Hsp92II CATG 9 cut(s) 401, 860, 887, 950, 975, 1384, 1389, 1487, 1591
HspAI GCGC 1 cut(s) 277
KpnI GGTACC 1 cut(s) 715
Ksp22I TGATCA 1 cut(s) 943
KspAI GTTAAC 1 cut(s) 1200
KspI CCGCGG 1 cut(s) 468
LmnI GCTCC 2 cut(s) 976, 1432
Lsp1109I GCAGC 6 cut(s) 222, 412, 448, 501, 596, 1079
MabI ACCWGGT 1 cut(s) 826
MaeI CTAG 3 cut(s) 540, 1218, 1458
MaeII ACGT 2 cut(s) 378, 1075
MaeIII GTNAC 4 cut(s) 83, 1346, 1416, 1598
MflI RGATCY 4 cut(s) 285, 771, 1222, 1562
MhlI GDGCHC 4 cut(s) 742, 754, 958, 1429
MluCI AATT 3 cut(s) 848, 1211, 1297
MlyI GAGTC 2 cut(s) 368, 1139
MseI TTAA 2 cut(s) 644, 1199
MslI CAYNNNNRTG 1 cut(s) 407
MspA1I CMGCKG 7 cut(s) 353, 425, 443, 467, 492, 530, 718
MspI CCGG 1 cut(s) 842
MspR9I CCNGG 5 cut(s) 828, 842, 871, 984, 1560
Mva1269I GAATGC 2 cut(s) 1238, 1531
MvaI CCWGG 4 cut(s) 828, 871, 984, 1560
MvnI CGCG 3 cut(s) 419, 467, 573
NciI CCSGG 1 cut(s) 842
NheI GCTAGC 1 cut(s) 539
NlaIII CATG 9 cut(s) 401, 860, 887, 950, 975, 1384, 1389, 1487, 1591
NlaIV GGNNCC 4 cut(s) 206, 713, 767, 1034
NmeAIII GCCGAG 2 cut(s) 198, 460
NmuCI GTSAC 1 cut(s) 1416
NotI GCGGCCGC 1 cut(s) 414
NruI TCGCGA 1 cut(s) 573
NspI RCATGY 3 cut(s) 401, 1389, 1591
PaeI GCATGC 3 cut(s) 401, 1389, 1591
PagI TCATGA 1 cut(s) 946
PceI AGGCCT 1 cut(s) 1441
PctI GAATGC 2 cut(s) 1238, 1531
PfeI GAWTC 3 cut(s) 568, 817, 1496
Pfl23II CGTACG 1 cut(s) 534
PflFI GACNNNGTC 2 cut(s) 498, 1031
PflMI CCANNNNNTGG 1 cut(s) 1565
PfoI TCCNGGA 1 cut(s) 869
PleI GAGTC 2 cut(s) 367, 1139
PpsI GAGTC 2 cut(s) 367, 1139
PpuMI RGGWCCY 1 cut(s) 1033
Psp124BI GAGCTC 2 cut(s) 754, 958
Psp5II RGGWCCY 1 cut(s) 1033
Psp6I CCWGG 4 cut(s) 826, 869, 982, 1558
PspFI CCCAGC 1 cut(s) 526
PspGI CCWGG 4 cut(s) 826, 869, 982, 1558
PspLI CGTACG 1 cut(s) 534
PspN4I GGNNCC 4 cut(s) 206, 713, 767, 1034
PspPI GGNCC 3 cut(s) 765, 830, 1033
PspPPI RGGWCCY 1 cut(s) 1033
PstI CTGCAG 1 cut(s) 994
PstNI CAGNNNCTG 2 cut(s) 989, 1565
PsuI RGATCY 4 cut(s) 285, 771, 1222, 1562
PsyI GACNNNGTC 2 cut(s) 498, 1031
PvuII CAGCTG 1 cut(s) 425
RruI TCGCGA 1 cut(s) 573
RsaI GTAC 6 cut(s) 18, 536, 713, 877, 1361, 1475
RsaNI GTAC 6 cut(s) 17, 535, 712, 876, 1360, 1474
RseI CAYNNNNRTG 1 cut(s) 407
SacI GAGCTC 2 cut(s) 754, 958
SacII CCGCGG 1 cut(s) 468
SaqAI TTAA 2 cut(s) 644, 1199
Sau96I GGNCC 3 cut(s) 765, 830, 1033
SchI GAGTC 2 cut(s) 368, 1139
ScrFI CCNGG 5 cut(s) 828, 842, 871, 984, 1560
SduI GDGCHC 4 cut(s) 742, 754, 958, 1429
SexAI ACCWGGT 1 cut(s) 826
SfcI CTRYAG 3 cut(s) 301, 990, 1593
Sfr303I CCGCGG 1 cut(s) 468
SgrBI CCGCGG 1 cut(s) 468
SinI GGWCC 3 cut(s) 765, 830, 1033
SmiMI CAYNNNNRTG 1 cut(s) 407
SmlI CTYRAG 1 cut(s) 916
SmoI CTYRAG 1 cut(s) 916
SphI GCATGC 3 cut(s) 401, 1389, 1591
Sse9I AATT 3 cut(s) 848, 1211, 1297
SseBI AGGCCT 1 cut(s) 1441
SspI AATATT 1 cut(s) 732
SspMI CTAG 3 cut(s) 540, 1218, 1458
SstI GAGCTC 2 cut(s) 754, 958
StuI AGGCCT 1 cut(s) 1441
StyD4I CCNGG 5 cut(s) 826, 840, 869, 982, 1558
TaaI ACNGT 3 cut(s) 16, 498, 1266
TaiI ACGT 2 cut(s) 381, 1078
TaqI TCGA 5 cut(s) 754, 865, 1038, 1044, 1340
TasI AATT 3 cut(s) 848, 1211, 1297
TatI WGTACW 1 cut(s) 875
TauI GCSGC 9 cut(s) 416, 419, 443, 452, 455, 467, 470, 533, 605
TfiI GAWTC 3 cut(s) 568, 817, 1496
Tru1I TTAA 2 cut(s) 644, 1199
Tru9I TTAA 2 cut(s) 644, 1199
TscAI CASTG 1 cut(s) 999
TseFI GTSAC 1 cut(s) 1416
TseI GCWGC 6 cut(s) 210, 425, 461, 489, 584, 1067
Tsp45I GTSAC 1 cut(s) 1416
TspDTI ATGAA 4 cut(s) 17, 882, 900, 1472
TspGWI ACGGA 2 cut(s) 15, 1164
TspRI CASTG 1 cut(s) 999
Tth111I GACNNNGTC 2 cut(s) 498, 1031
Van91I CCANNNNNTGG 1 cut(s) 1565
VpaK11BI GGWCC 3 cut(s) 765, 830, 1033
XapI RAATTY 2 cut(s) 848, 1211
XbaI TCTAGA 1 cut(s) 1217
XceI RCATGY 3 cut(s) 401, 1389, 1591
XspI CTAG 3 cut(s) 540, 1218, 1458
ZraI GACGTC 1 cut(s) 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.