MD04G1131900.v1.1
HSP70 Family

Hsp70 nucleotide exchange factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
21867372 .. 21869732
2361 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1131900.v1.1.491

Sequence Viewer

Length: 1185 bp
ATGGCGGACGGCGGACCCAACTGGGAAGGACTGCTCAAATGGAGCCTTGCCCACTCTGATGGCACTCCCCCCAATCACAATTTGAGCGAGGAGGATCGGAAGTGGTTTATGGAAGCGGTGCAGTCGCAGACCATCGACGTTGTGAAGCGGATGAAGGAGATAACCCTTGTAATGCAAACTCCTGAGCAGGTTTTGGAAGCTCAAGGAGTTACTCCTGCTGATATTGAAGATTTGTTGGATGAGTTGCAGGAGCATGTTGAGTCCATCGATATGGCCAATGATCTTCATTCCATTGGGGGTTTGGTCCCGCTTCTTGGTCACCTAAAGAATCCCCATGCTAATATCCGCGCCAAGGCTGCAGAAGTTGTGACAACTATTGTTCAGAACAACCCCAAGAGCCAGCAACTGGTTATGGAAGCGAATGGCTTGGAATATCTGTTCACTAATCTCGCATCTGACCCCGATGTCACAGTTCGAACCAAAGCTCTCGGCGCAATTTCCTCTTTGATCCGACACAACAAACCCGGTATCATTGCATTTCGTCTGGCAAATGGATATGCAGCATTAAGAGATGCTTTGGCTTCTGAAAATGTGAGATTCCAGAGGAAAGCCCTGAACTTGGTTCAGTTCCTACTGCACGAGAATAATTCTGATTGCAACGTAGTAACTGAGCTAGGATTTCCGCGCATAATGTTGCACCTTGCCTCTAGCGAAGATCTAGAAGTACGAGAAGCTGCACTTCGGGGCCTTCTTGCGCTCGCCCAAGACAAAACTGATGGGGCCAATAGTAGGTTAGCTGATGAAGATGAGAAGTTGAAGCAACTTCTTCAAGGACGAATTAAAAGTATCAGTTCAATGTCTCCTGAGGATCTCGGTGCAGCTAGAGAGGAGAGGCAGCTAGTGGACTCCCTGTGGAATGCCTGCTACAACGAGCCATCTTCTCTTCGCGAGAAGGGGCTTCTTGTTCTCCCTGGAGAAGATGCACCGCCACCTGATGTGGCAAGCAAGCTTTTTGAGCCTCGTCTTAGAGCTTTTTCTCCAAATCCTGCTGATACAAAACCTGCTACTGAAAAGAAAGAAGCTCCTCCTTTGCTGCTAGGATTAGGTCCTCCATCCGACGCAGCAAACACTCACGGTAATTCCGGTGGCAGAGATGATACCAATGGCAGCTCACAGACGAATTAA

Protein Analysis

395

Amino Acids

42.95

Weight (kDa)

5.03

Isoelectric Point (pI)

40.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fes1 PF08609 9 - 95 2.5e-11 Nucleotide exchange factor Fes1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 464
Acc36I ACCTGC 2 cut(s) 178, 1069
AccB7I CCANNNNNTGG 1 cut(s) 406
AccII CGCG 3 cut(s) 348, 685, 948
AciI CCGC 8 cut(s) 5, 12, 116, 148, 308, 346, 683, 986
AclWI GGATC 3 cut(s) 102, 502, 876
AcoI YGGCCR 1 cut(s) 273
AfaI GTAC 1 cut(s) 726
AfiI CCNNNNNNNGG 5 cut(s) 314, 352, 406, 619, 789
AgsI TTSAA 4 cut(s) 227, 817, 830, 855
AjnI CCWGG 1 cut(s) 970
AloI GAACNNNNNNTCC 2 cut(s) 422, 454
Alw26I GTCTC 1 cut(s) 864
AlwI GGATC 3 cut(s) 102, 502, 876
AlwNI CAGNNNCTG 1 cut(s) 406
AoxI GGCC 3 cut(s) 273, 745, 780
ApeKI GCWGC 8 cut(s) 356, 560, 734, 878, 895, 1093, 1121, 1167
AspLEI GCGC 4 cut(s) 350, 494, 687, 757
AspS9I GGNCC 5 cut(s) 14, 304, 745, 780, 1106
AsuC2I CCSGG 1 cut(s) 525
AsuHPI GGTGA 1 cut(s) 311
AsuII TTCGAA 1 cut(s) 475
AvaII GGWCC 3 cut(s) 14, 304, 1106
AxyI CCTNAGG 1 cut(s) 864
BalI TGGCCA 1 cut(s) 275
BauI CACGAG 1 cut(s) 638
BbvI GCAGC 8 cut(s) 343, 572, 721, 890, 907, 1080, 1133, 1179
BccI CCATC 6 cut(s) 53, 140, 272, 770, 943, 1120
BceAI ACGGC 1 cut(s) 25
BciT130I CCWGG 1 cut(s) 972
BcnI CCSGG 1 cut(s) 525
BcoDI GTCTC 1 cut(s) 864
BfaI CTAG 6 cut(s) 674, 708, 719, 882, 899, 1097
BfmI CTRYAG 1 cut(s) 357
BfuAI ACCTGC 2 cut(s) 178, 1069
BglII AGATCT 1 cut(s) 715
BisI GCNGC 8 cut(s) 357, 561, 735, 879, 896, 1094, 1122, 1168
BlsI GCNGC 8 cut(s) 358, 562, 736, 880, 897, 1095, 1123, 1169
Bme1390I CCNGG 2 cut(s) 525, 972
Bme18I GGWCC 3 cut(s) 14, 304, 1106
BmgT120I GGNCC 5 cut(s) 14, 304, 745, 780, 1106
BmiI GGNNCC 5 cut(s) 16, 44, 306, 746, 781
BmrFI CCNGG 2 cut(s) 525, 972
BmrI ACTGGG 1 cut(s) 31
BmsI GCATC 3 cut(s) 461, 562, 970
BmuI ACTGGG 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 993
Bpu10I CCTNAGC 1 cut(s) 183
Bpu14I TTCGAA 1 cut(s) 475
BpuEI CTTGAG 1 cut(s) 186
BpuMI CCSGG 1 cut(s) 525
Bsa29I ATCGAT 1 cut(s) 267
BsaJI CCNNGG 2 cut(s) 351, 970
BsaWI WCCGGW 1 cut(s) 1142
Bsc4I CCNNNNNNNGG 5 cut(s) 314, 352, 406, 619, 789
Bse1I ACTGG 2 cut(s) 26, 411
Bse21I CCTNAGG 1 cut(s) 864
Bse3DI GCAATG 1 cut(s) 531
BseBI CCWGG 1 cut(s) 972
BseCI ATCGAT 1 cut(s) 267
BseDI CCNNGG 2 cut(s) 351, 970
BseGI GGATG 3 cut(s) 156, 244, 1112
BseLI CCNNNNNNNGG 5 cut(s) 314, 352, 406, 619, 789
BseMI GCAATG 1 cut(s) 531
BseMII CTCAG 3 cut(s) 174, 660, 855
BseNI ACTGG 2 cut(s) 26, 411
BseRI GAGGAG 3 cut(s) 104, 902, 1074
BseXI GCAGC 8 cut(s) 343, 572, 721, 890, 907, 1080, 1133, 1179
BsgI GTGCAG 4 cut(s) 140, 620, 720, 897
Bsh1236I CGCG 3 cut(s) 348, 685, 948
BshFI GGCC 3 cut(s) 275, 747, 782
BshVI ATCGAT 1 cut(s) 267
BsiSI CCGG 2 cut(s) 525, 1143
BslFI GGGAC 1 cut(s) 290
BslI CCNNNNNNNGG 5 cut(s) 314, 352, 406, 619, 789
BsmAI GTCTC 1 cut(s) 864
BsmFI GGGAC 1 cut(s) 290
BsmI GAATGC 1 cut(s) 922
BsnI GGCC 3 cut(s) 275, 747, 782
Bsp119I TTCGAA 1 cut(s) 475
Bsp143I GATC 5 cut(s) 94, 280, 507, 715, 868
Bsp68I TCGCGA 1 cut(s) 948
BspACI CCGC 8 cut(s) 5, 12, 116, 148, 308, 346, 683, 986
BspANI GGCC 3 cut(s) 275, 747, 782
BspCNI CTCAG 3 cut(s) 175, 661, 856
BspDI ATCGAT 1 cut(s) 267
BspFNI CGCG 3 cut(s) 348, 685, 948
BspLI GGNNCC 5 cut(s) 16, 44, 306, 746, 781
BspMAI CTGCAG 1 cut(s) 361
BspMI ACCTGC 2 cut(s) 178, 1069
BspPI GGATC 3 cut(s) 102, 502, 876
BspT104I TTCGAA 1 cut(s) 475
BsrDI GCAATG 1 cut(s) 531
BsrI ACTGG 2 cut(s) 26, 411
BssECI CCNNGG 2 cut(s) 351, 970
BssMI GATC 5 cut(s) 94, 280, 507, 715, 868
BssSI CACGAG 1 cut(s) 638
BssT1I CCWWGG 1 cut(s) 351
Bst2BI CACGAG 1 cut(s) 638
Bst2UI CCWGG 1 cut(s) 972
Bst4CI ACNGT 2 cut(s) 472, 1136
Bst6I CTCTTC 1 cut(s) 948
BstBI TTCGAA 1 cut(s) 475
BstC8I GCNNGC 5 cut(s) 401, 759, 922, 1003, 1007
BstDEI CTNAG 4 cut(s) 183, 669, 864, 1025
BstEII GGTNACC 1 cut(s) 317
BstF5I GGATG 3 cut(s) 156, 244, 1112
BstFNI CGCG 3 cut(s) 348, 685, 948
BstHHI GCGC 4 cut(s) 350, 494, 687, 757
BstKTI GATC 5 cut(s) 97, 283, 510, 718, 871
BstMAI GTCTC 1 cut(s) 864
BstMBI GATC 5 cut(s) 94, 280, 507, 715, 868
BstMWI GCNNNNNNNGC 3 cut(s) 356, 491, 1015
BstNI CCWGG 1 cut(s) 972
BstNSI RCATGY 1 cut(s) 257
BstPI GGTNACC 1 cut(s) 317
BstSCI CCNGG 2 cut(s) 523, 970
BstSFI CTRYAG 1 cut(s) 357
BstUI CGCG 3 cut(s) 348, 685, 948
BstV1I GCAGC 8 cut(s) 343, 572, 721, 890, 907, 1080, 1133, 1179
BstX2I RGATCY 2 cut(s) 715, 868
BstXI CCANNNNNNTGG 2 cut(s) 59, 271
BstYI RGATCY 2 cut(s) 715, 868
Bsu15I ATCGAT 1 cut(s) 267
Bsu36I CCTNAGG 1 cut(s) 864
BsuRI GGCC 3 cut(s) 275, 747, 782
BsuTUI ATCGAT 1 cut(s) 267
BtsCI GGATG 3 cut(s) 156, 244, 1112
BtuMI TCGCGA 1 cut(s) 948
BveI ACCTGC 2 cut(s) 178, 1069
Cac8I GCNNGC 5 cut(s) 401, 759, 922, 1003, 1007
CaiI CAGNNNCTG 1 cut(s) 406
CfoI GCGC 4 cut(s) 350, 494, 687, 757
Cfr13I GGNCC 5 cut(s) 14, 304, 745, 780, 1106
ClaI ATCGAT 1 cut(s) 267
CseI GACGC 1 cut(s) 1127
Csp6I GTAC 1 cut(s) 725
CviAII CATG 2 cut(s) 254, 335
CviQI GTAC 1 cut(s) 725
DdeI CTNAG 4 cut(s) 183, 669, 864, 1025
DpnI GATC 5 cut(s) 96, 282, 509, 717, 870
DpnII GATC 5 cut(s) 94, 280, 507, 715, 868
DrdI GACNNNNNNGTC 1 cut(s) 464
DseDI GACNNNNNNGTC 1 cut(s) 464
EaeI YGGCCR 1 cut(s) 273
Eam1104I CTCTTC 1 cut(s) 948
EarI CTCTTC 1 cut(s) 948
EciI GGCGGA 2 cut(s) 20, 27
Eco130I CCWWGG 1 cut(s) 351
Eco47I GGWCC 3 cut(s) 14, 304, 1106
Eco81I CCTNAGG 1 cut(s) 864
Eco91I GGTNACC 1 cut(s) 317
EcoO109I RGGNCCY 2 cut(s) 745, 1106
EcoO65I GGTNACC 1 cut(s) 317
EcoRII CCWGG 1 cut(s) 970
EcoT14I CCWWGG 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 351
FaeI CATG 2 cut(s) 257, 338
FaiI YATR 7 cut(s) 110, 255, 272, 336, 413, 558, 689
FalI AAGNNNNNCTT 4 cut(s) 559, 591, 723, 755
FaqI GGGAC 1 cut(s) 290
FatI CATG 2 cut(s) 253, 334
FauI CCCGC 1 cut(s) 315
Fnu4HI GCNGC 8 cut(s) 357, 561, 735, 879, 896, 1094, 1122, 1168
FokI GGATG 3 cut(s) 163, 251, 1099
Fsp4HI GCNGC 8 cut(s) 357, 561, 735, 879, 896, 1094, 1122, 1168
FspBI CTAG 6 cut(s) 674, 708, 719, 882, 899, 1097
GlaI GCGC 4 cut(s) 349, 493, 686, 756
GluI GCNGC 8 cut(s) 357, 561, 735, 879, 896, 1094, 1122, 1168
GsuI CTGGAG 1 cut(s) 993
HaeIII GGCC 3 cut(s) 275, 747, 782
HapII CCGG 2 cut(s) 525, 1143
HgaI GACGC 1 cut(s) 1127
HhaI GCGC 4 cut(s) 350, 494, 687, 757
Hin1II CATG 2 cut(s) 257, 338
Hin6I GCGC 4 cut(s) 348, 492, 685, 755
HinP1I GCGC 4 cut(s) 348, 492, 685, 755
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 4 cut(s) 260, 328, 597, 905
HpaII CCGG 2 cut(s) 525, 1143
HphI GGTGA 1 cut(s) 311
Hpy166II GTNNAC 2 cut(s) 441, 904
Hpy188I TCNGA 8 cut(s) 58, 99, 384, 457, 512, 586, 652, 1117
Hpy188III TCNNGA 5 cut(s) 182, 601, 719, 863, 947
Hpy8I GTNNAC 2 cut(s) 441, 904
Hpy99I CGWCG 2 cut(s) 140, 1121
HpyAV CCTTC 4 cut(s) 20, 148, 758, 946
HpyCH4III ACNGT 2 cut(s) 472, 1136
HpyCH4IV ACGT 2 cut(s) 138, 660
HpyF10VI GCNNNNNNNGC 3 cut(s) 356, 491, 1015
HpyF3I CTNAG 4 cut(s) 183, 669, 864, 1025
HpySE526I ACGT 2 cut(s) 138, 660
Hsp92II CATG 2 cut(s) 257, 338
HspAI GCGC 4 cut(s) 348, 492, 685, 755
Kzo9I GATC 5 cut(s) 94, 280, 507, 715, 868
LmnI GCTCC 3 cut(s) 42, 250, 1087
Lsp1109I GCAGC 8 cut(s) 343, 572, 721, 890, 907, 1080, 1133, 1179
LweI GCATC 3 cut(s) 461, 562, 970
MaeI CTAG 6 cut(s) 674, 708, 719, 882, 899, 1097
MaeII ACGT 2 cut(s) 138, 660
MaeIII GTNAC 5 cut(s) 208, 317, 367, 466, 664
MalI GATC 5 cut(s) 96, 282, 509, 717, 870
MboI GATC 5 cut(s) 94, 280, 507, 715, 868
MboII GAAGA 8 cut(s) 239, 275, 725, 815, 818, 930, 935, 989
MflI RGATCY 2 cut(s) 715, 868
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 6 cut(s) 79, 495, 646, 837, 1138, 1180
MluNI TGGCCA 1 cut(s) 275
MlyI GAGTC 2 cut(s) 269, 899
MmeI TCCRAC 3 cut(s) 216, 535, 1140
Mox20I TGGCCA 1 cut(s) 275
MscI TGGCCA 1 cut(s) 275
MseI TTAA 3 cut(s) 566, 840, 1183
MslI CAYNNNNRTG 2 cut(s) 57, 269
Msp20I TGGCCA 1 cut(s) 275
MspI CCGG 2 cut(s) 525, 1143
MspR9I CCNGG 2 cut(s) 525, 972
Mva1269I GAATGC 1 cut(s) 922
MvaI CCWGG 1 cut(s) 972
MvnI CGCG 3 cut(s) 348, 685, 948
MwoI GCNNNNNNNGC 3 cut(s) 356, 491, 1015
NciI CCSGG 1 cut(s) 525
NdeII GATC 5 cut(s) 94, 280, 507, 715, 868
NlaIII CATG 2 cut(s) 257, 338
NlaIV GGNNCC 5 cut(s) 16, 44, 306, 746, 781
NmeAIII GCCGAG 1 cut(s) 468
NmuCI GTSAC 3 cut(s) 317, 367, 466
NruI TCGCGA 1 cut(s) 948
NspI RCATGY 1 cut(s) 257
NspV TTCGAA 1 cut(s) 475
PctI GAATGC 1 cut(s) 922
PfeI GAWTC 2 cut(s) 328, 597
PflMI CCANNNNNTGG 1 cut(s) 406
PkrI GCNGC 8 cut(s) 358, 562, 736, 880, 897, 1095, 1123, 1169
PleI GAGTC 2 cut(s) 268, 899
PpsI GAGTC 2 cut(s) 268, 899
PpuMI RGGWCCY 1 cut(s) 1106
Psp5II RGGWCCY 1 cut(s) 1106
Psp6I CCWGG 1 cut(s) 970
PspEI GGTNACC 1 cut(s) 317
PspGI CCWGG 1 cut(s) 970
PspN4I GGNNCC 5 cut(s) 16, 44, 306, 746, 781
PspPI GGNCC 5 cut(s) 14, 304, 745, 780, 1106
PspPPI RGGWCCY 1 cut(s) 1106
PstI CTGCAG 1 cut(s) 361
PstNI CAGNNNCTG 1 cut(s) 406
PsuI RGATCY 2 cut(s) 715, 868
RruI TCGCGA 1 cut(s) 948
RsaI GTAC 1 cut(s) 726
RsaNI GTAC 1 cut(s) 725
RseI CAYNNNNRTG 2 cut(s) 57, 269
SaqAI TTAA 3 cut(s) 566, 840, 1183
SatI GCNGC 8 cut(s) 357, 561, 735, 879, 896, 1094, 1122, 1168
Sau3AI GATC 5 cut(s) 94, 280, 507, 715, 868
Sau96I GGNCC 5 cut(s) 14, 304, 745, 780, 1106
SchI GAGTC 2 cut(s) 269, 899
ScrFI CCNGG 2 cut(s) 525, 972
SfaNI GCATC 3 cut(s) 461, 562, 970
SfcI CTRYAG 1 cut(s) 357
SfuI TTCGAA 1 cut(s) 475
SinI GGWCC 3 cut(s) 14, 304, 1106
SmiMI CAYNNNNRTG 2 cut(s) 57, 269
SmlI CTYRAG 1 cut(s) 201
SmoI CTYRAG 1 cut(s) 201
Sse9I AATT 6 cut(s) 79, 495, 646, 837, 1138, 1180
SsiI CCGC 8 cut(s) 5, 12, 116, 148, 308, 346, 683, 986
SspMI CTAG 6 cut(s) 674, 708, 719, 882, 899, 1097
StyD4I CCNGG 2 cut(s) 523, 970
StyI CCWWGG 1 cut(s) 351
TaaI ACNGT 2 cut(s) 472, 1136
TaiI ACGT 2 cut(s) 141, 663
TaqI TCGA 3 cut(s) 135, 267, 475
TasI AATT 6 cut(s) 79, 495, 646, 837, 1138, 1180
TfiI GAWTC 2 cut(s) 328, 597
Tru1I TTAA 3 cut(s) 566, 840, 1183
Tru9I TTAA 3 cut(s) 566, 840, 1183
TseFI GTSAC 3 cut(s) 317, 367, 466
TseI GCWGC 8 cut(s) 356, 560, 734, 878, 895, 1093, 1121, 1167
Tsp45I GTSAC 3 cut(s) 317, 367, 466
TspDTI ATGAA 3 cut(s) 167, 275, 816
Van91I CCANNNNNTGG 1 cut(s) 406
VpaK11BI GGWCC 3 cut(s) 14, 304, 1106
XbaI TCTAGA 1 cut(s) 718
XceI RCATGY 1 cut(s) 257
XcmI CCANNNNNNNNNTGG 1 cut(s) 298
XspI CTAG 6 cut(s) 674, 708, 719, 882, 899, 1097
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.