RchiOBHm_Chr7g0180681
HSP70 Family

Hsp70 nucleotide exchange factor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
2509685 .. 2510698
1014 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16114

Sequence Viewer

Length: 1014 bp
ATGGCCAGCGGTGGACCCAACTGGGAAGGATTGCTGAAGTGGAGCCTAGCTCATTCTGATGGGACTGGCCCTAACCGTAGTTTAAGCGAAGAGGATCGTAAGTGGTTCATGGAAGCAATGCAAGAGCAGACTTTTGATGTGGTGAAGCGAATGAAGGAGATCTCTCTAGTAATGCAAACTCCGGAGCATGTTTTGGAAGATCAAGGAGTTACTCCAGCTGACATTGAAGATTTGTTAGATGAGTTGCAAGAGCATGTTGAGTCCATTGACATGGCCAACGATCTTCACTCAATTGGCGGGTTGGTCCCATTACTTGGTTACTTAAAGAACTCCAATGCTAATATCAGAGCAAAAGCTGCAGAAGTTGTGACCACTATTGTGCAGAACAATCCAAAGAGCCAGAAACTTGTTATGGAAGCAAACGGCTTTGAATGTCTGTTTTCTTTATTCACATCCGATCCTGTGGTTAATGTCCGAACCAAAGCGCTTGGTGCAATCTCCTCTTTGATCCGGGACAACAAACCGGGTGTCATTGCTTTTCGCAAACAAAATAATGGATATGAAGCCTTGAGAGATGGTCTAGCTTCTAAAAGTGGGAGGTTTCAGAGGAAAGCCCTGAGTTTGATCAACTACTTACTCCGCGAGAATAGATCTGATTGCATCATAGTAAACAAGTTAGGATTTCCATGCCTAATGGTGCAGCTTGCCTCTAGCAAAGATGTAGACGTGCGAGAAGGTGCACTCCAAGGCCTACTTGAGCTTGCTCGAGGGAAAACTCAAGGGATCAGAGAAGATGAGAAATTGAAGCAACTTCTTCGAAATCGAATTGAAGATGTTGGAGCAGGTAGGGAGGAGAGGCAGCTGCTAGACTCCCTGTGGAATGCATGCTACAACAAGCCATCGCCTCTTCGTGAGAAGGGGATTCTCGTGCTTCCTGGGGAAGATGCCCCGCCACCTGATGTTGCAAGCAAGCATTTTGAACCTGCTCTTAGAGCAATGGCTCCAAAGCCTTGA

Protein Analysis

337

Amino Acids

37.38

Weight (kDa)

5.88

Isoelectric Point (pI)

43.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fes1 PF08609 9 - 95 1.4e-11 Nucleotide exchange factor Fes1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 833, 991
AccB7I CCANNNNNTGG 1 cut(s) 314
AccI GTMKAC 1 cut(s) 723
AccII CGCG 1 cut(s) 642
AccIII TCCGGA 1 cut(s) 181
AciI CCGC 4 cut(s) 9, 297, 640, 950
AclWI GGATC 4 cut(s) 102, 452, 502, 791
AcoI YGGCCR 2 cut(s) 3, 273
AcuI CTGAAG 1 cut(s) 56
AfeI AGCGCT 1 cut(s) 486
AfiI CCNNNNNNNGG 1 cut(s) 314
AgsI TTSAA 5 cut(s) 227, 431, 805, 830, 980
AjiI CACGTC 1 cut(s) 727
AjnI CCWGG 1 cut(s) 934
AleI CACNNNNGTG 1 cut(s) 377
AluBI AGCT 7 cut(s) 50, 218, 356, 584, 703, 760, 862
AluI AGCT 7 cut(s) 50, 218, 356, 584, 703, 760, 862
Alw21I GWGCWC 1 cut(s) 742
Alw44I GTGCAC 1 cut(s) 738
AlwI GGATC 4 cut(s) 102, 452, 502, 791
Ama87I CYCGRG 1 cut(s) 765
Aor13HI TCCGGA 1 cut(s) 181
Aor51HI AGCGCT 1 cut(s) 486
AoxI GGCC 4 cut(s) 3, 67, 273, 748
ApaLI GTGCAC 1 cut(s) 738
ApeKI GCWGC 4 cut(s) 356, 700, 859, 862
ArsI GACNNNNNNTTYG 2 cut(s) 513, 545
AspLEI GCGC 1 cut(s) 487
AspS9I GGNCC 3 cut(s) 14, 68, 304
AsuC2I CCSGG 2 cut(s) 512, 525
AsuHPI GGTGA 1 cut(s) 154
AsuII TTCGAA 1 cut(s) 817
AvaI CYCGRG 1 cut(s) 765
AvaII GGWCC 2 cut(s) 14, 304
BaeGI GKGCMC 1 cut(s) 742
BalI TGGCCA 2 cut(s) 5, 275
BauI CACGAG 1 cut(s) 926
Bbv12I GWGCWC 1 cut(s) 742
BbvI GCAGC 4 cut(s) 343, 712, 849, 871
BccI CCATC 3 cut(s) 53, 569, 907
BceAI ACGGC 1 cut(s) 439
BcgI CGANNNNNNTGC 2 cut(s) 797, 831
BciT130I CCWGG 1 cut(s) 936
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 2 cut(s) 512, 525
BfaI CTAG 5 cut(s) 47, 167, 581, 711, 866
BfmI CTRYAG 1 cut(s) 357
BfoI RGCGCY 1 cut(s) 488
BfuAI ACCTGC 2 cut(s) 833, 991
BglII AGATCT 2 cut(s) 159, 650
BisI GCNGC 4 cut(s) 357, 701, 860, 863
BlsI GCNGC 4 cut(s) 358, 702, 861, 864
Bme1390I CCNGG 3 cut(s) 512, 525, 936
Bme18I GGWCC 2 cut(s) 14, 304
BmeT110I CYCGRG 1 cut(s) 765
BmgBI CACGTC 1 cut(s) 727
BmgT120I GGNCC 3 cut(s) 14, 68, 304
BmiI GGNNCC 4 cut(s) 16, 44, 306, 1002
BmrFI CCNGG 3 cut(s) 512, 525, 936
BmrI ACTGGG 1 cut(s) 31
BmsI GCATC 2 cut(s) 669, 934
BmuI ACTGGG 1 cut(s) 31
BplI GAGNNNNNCTC 2 cut(s) 34, 66
BpmI CTGGAG 1 cut(s) 198
Bpu14I TTCGAA 1 cut(s) 817
BpuEI CTTGAG 3 cut(s) 589, 762, 776
BpuMI CCSGG 2 cut(s) 512, 525
BsaJI CCNNGG 2 cut(s) 745, 935
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 1 cut(s) 314
Bse1I ACTGG 2 cut(s) 26, 70
Bse3DI GCAATG 3 cut(s) 123, 531, 1002
BseAI TCCGGA 1 cut(s) 181
BseBI CCWGG 1 cut(s) 936
BseDI CCNNGG 2 cut(s) 745, 935
BseGI GGATG 1 cut(s) 452
BseLI CCNNNNNNNGG 1 cut(s) 314
BseMI GCAATG 3 cut(s) 123, 531, 1002
BseMII CTCAG 1 cut(s) 608
BseNI ACTGG 2 cut(s) 26, 70
BseRI GAGGAG 2 cut(s) 490, 866
BseSI GKGCMC 1 cut(s) 742
BseXI GCAGC 4 cut(s) 343, 712, 849, 871
BsgI GTGCAG 2 cut(s) 401, 719
Bsh1236I CGCG 1 cut(s) 642
BshFI GGCC 4 cut(s) 5, 69, 275, 750
BsiHKAI GWGCWC 1 cut(s) 742
BsiHKCI CYCGRG 1 cut(s) 765
BsiSI CCGG 3 cut(s) 182, 511, 524
BslFI GGGAC 3 cut(s) 76, 290, 527
BslI CCNNNNNNNGG 1 cut(s) 314
BsmFI GGGAC 3 cut(s) 76, 290, 527
BsmI GAATGC 1 cut(s) 886
BsnI GGCC 4 cut(s) 5, 69, 275, 750
BsoBI CYCGRG 1 cut(s) 765
Bsp119I TTCGAA 1 cut(s) 817
Bsp1286I GDGCHC 1 cut(s) 742
Bsp13I TCCGGA 1 cut(s) 181
Bsp143I GATC 9 cut(s) 94, 159, 199, 280, 457, 507, 624, 650, 783
BspACI CCGC 4 cut(s) 9, 297, 640, 950
BspANI GGCC 4 cut(s) 5, 69, 275, 750
BspCNI CTCAG 1 cut(s) 609
BspEI TCCGGA 1 cut(s) 181
BspFNI CGCG 1 cut(s) 642
BspLI GGNNCC 4 cut(s) 16, 44, 306, 1002
BspMAI CTGCAG 1 cut(s) 361
BspMI ACCTGC 2 cut(s) 833, 991
BspPI GGATC 4 cut(s) 102, 452, 502, 791
BspT104I TTCGAA 1 cut(s) 817
BsrDI GCAATG 3 cut(s) 123, 531, 1002
BsrI ACTGG 2 cut(s) 26, 70
BssECI CCNNGG 2 cut(s) 745, 935
BssMI GATC 9 cut(s) 94, 159, 199, 280, 457, 507, 624, 650, 783
BssSI CACGAG 1 cut(s) 926
BssT1I CCWWGG 1 cut(s) 745
Bst2BI CACGAG 1 cut(s) 926
Bst2UI CCWGG 1 cut(s) 936
Bst4CI ACNGT 1 cut(s) 77
Bst6I CTCTTC 2 cut(s) 84, 912
BstAPI GCANNNNNTGC 1 cut(s) 356
BstBI TTCGAA 1 cut(s) 817
BstC8I GCNNGC 6 cut(s) 7, 705, 762, 886, 967, 971
BstDEI CTNAG 2 cut(s) 617, 989
BstF5I GGATG 1 cut(s) 452
BstFNI CGCG 1 cut(s) 642
BstH2I RGCGCY 1 cut(s) 488
BstHHI GCGC 1 cut(s) 487
BstKTI GATC 9 cut(s) 97, 162, 202, 283, 460, 510, 627, 653, 786
BstMBI GATC 9 cut(s) 94, 159, 199, 280, 457, 507, 624, 650, 783
BstMWI GCNNNNNNNGC 3 cut(s) 356, 491, 992
BstNI CCWGG 1 cut(s) 936
BstNSI RCATGY 3 cut(s) 191, 257, 888
BstSCI CCNGG 3 cut(s) 510, 523, 934
BstSFI CTRYAG 1 cut(s) 357
BstSLI GKGCMC 1 cut(s) 742
BstUI CGCG 1 cut(s) 642
BstV1I GCAGC 4 cut(s) 343, 712, 849, 871
BstX2I RGATCY 2 cut(s) 159, 650
BstXI CCANNNNNNTGG 1 cut(s) 271
BstYI RGATCY 2 cut(s) 159, 650
BsuRI GGCC 4 cut(s) 5, 69, 275, 750
BtgZI GCGATG 1 cut(s) 885
BtrI CACGTC 1 cut(s) 727
BtsCI GGATG 1 cut(s) 452
BveI ACCTGC 2 cut(s) 833, 991
Cac8I GCNNGC 6 cut(s) 7, 705, 762, 886, 967, 971
CfoI GCGC 1 cut(s) 487
Cfr13I GGNCC 3 cut(s) 14, 68, 304
CviAII CATG 6 cut(s) 109, 188, 254, 271, 687, 885
DdeI CTNAG 2 cut(s) 617, 989
DpnI GATC 9 cut(s) 96, 161, 201, 282, 459, 509, 626, 652, 785
DpnII GATC 9 cut(s) 94, 159, 199, 280, 457, 507, 624, 650, 783
EaeI YGGCCR 2 cut(s) 3, 273
Eam1104I CTCTTC 2 cut(s) 84, 912
EarI CTCTTC 2 cut(s) 84, 912
Eco130I CCWWGG 1 cut(s) 745
Eco147I AGGCCT 1 cut(s) 750
Eco47I GGWCC 2 cut(s) 14, 304
Eco47III AGCGCT 1 cut(s) 486
Eco57I CTGAAG 1 cut(s) 56
Eco88I CYCGRG 1 cut(s) 765
EcoRII CCWGG 1 cut(s) 934
EcoT14I CCWWGG 1 cut(s) 745
EcoT22I ATGCAT 1 cut(s) 886
ErhI CCWWGG 1 cut(s) 745
FaeI CATG 6 cut(s) 112, 191, 257, 274, 690, 888
FaiI YATR 9 cut(s) 110, 189, 255, 272, 413, 561, 665, 688, 886
FalI AAGNNNNNCTT 2 cut(s) 738, 770
FaqI GGGAC 3 cut(s) 76, 290, 527
FatI CATG 6 cut(s) 108, 187, 253, 270, 686, 884
FauI CCCGC 2 cut(s) 290, 957
FbaI TGATCA 1 cut(s) 624
FblI GTMKAC 1 cut(s) 723
Fnu4HI GCNGC 4 cut(s) 357, 701, 860, 863
FokI GGATG 1 cut(s) 439
Fsp4HI GCNGC 4 cut(s) 357, 701, 860, 863
FspBI CTAG 5 cut(s) 47, 167, 581, 711, 866
GlaI GCGC 1 cut(s) 486
GluI GCNGC 4 cut(s) 357, 701, 860, 863
GsuI CTGGAG 1 cut(s) 198
HaeII RGCGCY 1 cut(s) 488
HaeIII GGCC 4 cut(s) 5, 69, 275, 750
HapII CCGG 3 cut(s) 182, 511, 524
HhaI GCGC 1 cut(s) 487
Hin1II CATG 6 cut(s) 112, 191, 257, 274, 690, 888
Hin6I GCGC 1 cut(s) 485
HinP1I GCGC 1 cut(s) 485
HinfI GANTC 3 cut(s) 260, 869, 922
HpaII CCGG 3 cut(s) 182, 511, 524
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 4 cut(s) 14, 670, 724, 740
Hpy188I TCNGA 7 cut(s) 58, 347, 457, 476, 606, 655, 788
Hpy188III TCNNGA 2 cut(s) 182, 911
Hpy8I GTNNAC 4 cut(s) 14, 670, 724, 740
HpyAV CCTTC 4 cut(s) 20, 148, 728, 910
HpyCH4III ACNGT 1 cut(s) 77
HpyCH4IV ACGT 1 cut(s) 726
HpyF10VI GCNNNNNNNGC 3 cut(s) 356, 491, 992
HpyF3I CTNAG 2 cut(s) 617, 989
HpySE526I ACGT 1 cut(s) 726
Hsp92II CATG 6 cut(s) 112, 191, 257, 274, 690, 888
HspAI GCGC 1 cut(s) 485
Kpn2I TCCGGA 1 cut(s) 181
Ksp22I TGATCA 1 cut(s) 624
Kzo9I GATC 9 cut(s) 94, 159, 199, 280, 457, 507, 624, 650, 783
LmnI GCTCC 4 cut(s) 42, 184, 839, 1006
Lsp1109I GCAGC 4 cut(s) 343, 712, 849, 871
LweI GCATC 2 cut(s) 669, 934
MaeI CTAG 5 cut(s) 47, 167, 581, 711, 866
MaeII ACGT 1 cut(s) 726
MaeIII GTNAC 3 cut(s) 208, 317, 367
MalI GATC 9 cut(s) 96, 161, 201, 282, 459, 509, 626, 652, 785
MboI GATC 9 cut(s) 94, 159, 199, 280, 457, 507, 624, 650, 783
MboII GAAGA 9 cut(s) 101, 209, 239, 275, 803, 806, 842, 899, 953
MfeI CAATTG 1 cut(s) 291
MflI RGATCY 2 cut(s) 159, 650
MhlI GDGCHC 1 cut(s) 742
MlsI TGGCCA 2 cut(s) 5, 275
MluCI AATT 3 cut(s) 291, 800, 825
MluNI TGGCCA 2 cut(s) 5, 275
MlyI GAGTC 2 cut(s) 269, 863
MmeI TCCRAC 1 cut(s) 817
MnlI CCTC 9 cut(s) 85, 511, 591, 600, 718, 761, 844, 849, 915
Mox20I TGGCCA 2 cut(s) 5, 275
Mph1103I ATGCAT 1 cut(s) 886
MroI TCCGGA 1 cut(s) 181
MscI TGGCCA 2 cut(s) 5, 275
MseI TTAA 3 cut(s) 83, 323, 468
MslI CAYNNNNRTG 3 cut(s) 57, 269, 377
Msp20I TGGCCA 2 cut(s) 5, 275
MspA1I CMGCKG 3 cut(s) 9, 218, 862
MspI CCGG 3 cut(s) 182, 511, 524
MspR9I CCNGG 3 cut(s) 512, 525, 936
MunI CAATTG 1 cut(s) 291
Mva1269I GAATGC 1 cut(s) 886
MvaI CCWGG 1 cut(s) 936
MvnI CGCG 1 cut(s) 642
MwoI GCNNNNNNNGC 3 cut(s) 356, 491, 992
NciI CCSGG 2 cut(s) 512, 525
NdeII GATC 9 cut(s) 94, 159, 199, 280, 457, 507, 624, 650, 783
NlaIII CATG 6 cut(s) 112, 191, 257, 274, 690, 888
NlaIV GGNNCC 4 cut(s) 16, 44, 306, 1002
NmuCI GTSAC 1 cut(s) 367
NsiI ATGCAT 1 cut(s) 886
NspI RCATGY 3 cut(s) 191, 257, 888
NspV TTCGAA 1 cut(s) 817
OliI CACNNNNGTG 1 cut(s) 377
PaeI GCATGC 1 cut(s) 888
PaeR7I CTCGAG 1 cut(s) 765
PceI AGGCCT 1 cut(s) 750
PctI GAATGC 1 cut(s) 886
PfeI GAWTC 1 cut(s) 922
PflMI CCANNNNNTGG 1 cut(s) 314
PfoI TCCNGGA 1 cut(s) 510
PkrI GCNGC 4 cut(s) 358, 702, 861, 864
PleI GAGTC 2 cut(s) 268, 863
PpsI GAGTC 2 cut(s) 268, 863
Psp6I CCWGG 1 cut(s) 934
PspGI CCWGG 1 cut(s) 934
PspN4I GGNNCC 4 cut(s) 16, 44, 306, 1002
PspPI GGNCC 3 cut(s) 14, 68, 304
PspXI VCTCGAGB 1 cut(s) 765
PstI CTGCAG 1 cut(s) 361
PsuI RGATCY 2 cut(s) 159, 650
PvuII CAGCTG 2 cut(s) 218, 862
RseI CAYNNNNRTG 3 cut(s) 57, 269, 377
SaqAI TTAA 3 cut(s) 83, 323, 468
SatI GCNGC 4 cut(s) 357, 701, 860, 863
Sau3AI GATC 9 cut(s) 94, 159, 199, 280, 457, 507, 624, 650, 783
Sau96I GGNCC 3 cut(s) 14, 68, 304
SchI GAGTC 2 cut(s) 269, 863
ScrFI CCNGG 3 cut(s) 512, 525, 936
SduI GDGCHC 1 cut(s) 742
SfaNI GCATC 2 cut(s) 669, 934
SfcI CTRYAG 1 cut(s) 357
Sfr274I CTCGAG 1 cut(s) 765
SfuI TTCGAA 1 cut(s) 817
SinI GGWCC 2 cut(s) 14, 304
SlaI CTCGAG 1 cut(s) 765
SmiMI CAYNNNNRTG 3 cut(s) 57, 269, 377
SmlI CTYRAG 4 cut(s) 568, 755, 765, 777
SmoI CTYRAG 4 cut(s) 568, 755, 765, 777
SphI GCATGC 1 cut(s) 888
Sse9I AATT 3 cut(s) 291, 800, 825
SseBI AGGCCT 1 cut(s) 750
SsiI CCGC 4 cut(s) 9, 297, 640, 950
SspMI CTAG 5 cut(s) 47, 167, 581, 711, 866
StuI AGGCCT 1 cut(s) 750
StyD4I CCNGG 3 cut(s) 510, 523, 934
StyI CCWWGG 1 cut(s) 745
TaaI ACNGT 1 cut(s) 77
TaiI ACGT 1 cut(s) 729
TaqI TCGA 3 cut(s) 766, 817, 823
TasI AATT 3 cut(s) 291, 800, 825
TfiI GAWTC 1 cut(s) 922
Tru1I TTAA 3 cut(s) 83, 323, 468
Tru9I TTAA 3 cut(s) 83, 323, 468
TseFI GTSAC 1 cut(s) 367
TseI GCWGC 4 cut(s) 356, 700, 859, 862
Tsp45I GTSAC 1 cut(s) 367
TspDTI ATGAA 3 cut(s) 97, 167, 576
Van91I CCANNNNNTGG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 738
VpaK11BI GGWCC 2 cut(s) 14, 304
XceI RCATGY 3 cut(s) 191, 257, 888
XhoI CTCGAG 1 cut(s) 765
XmiI GTMKAC 1 cut(s) 723
XspI CTAG 5 cut(s) 47, 167, 581, 711, 866
Zsp2I ATGCAT 1 cut(s) 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.