MD12G1145000.v1.1
HSP70 Family

Hsp70 nucleotide exchange factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
22412165 .. 22414551
2387 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1145000.v1.1.491

Sequence Viewer

Length: 1185 bp
ATGGCGGACGGCGGACCCAACTGGGAAGGACTGCTCAAATGGAGCCTCTCTCACTCCGACGGCACTCGCCCCAATCGCAATCTGAGCGAGGAGGAACGGAAGTGGTTTATGGAAGCGATGCAGTCCCAGAGTATCGATGTTGTAAAGAGGATGAAGGAGATATCGCTTGTAATGCAAACTCCTGAGGACGTTTTGGAAGCTCAGGGAGTTACTCCTGCTGACATAGAAGATTTGTTGGATGAGTTGCAGGAGCATGTTGAGTCCATTGACGTGGCCAATGATCTTCACTCCGTTGGAGGTTTGGTCCCTCTTCTTGGTTACCTTAAGAATTCCCATGCTAATATCCGTGCAAAGGCTGCAGAAGTTGTGACCACTATTGTCCAGAACAACCCCAAGAGCCAGCAATTGGTTATGGAAGCGAATGGCTTAGAATATCTGTTTACTAATCTAGCATCTGACCCTGATGTCACGGTTCGAACCAAAGCCCTTGGAGCAATTTCCTCTTTAATCCGGCACAACAAACCCGGTATCACTGCATTTCGTCTGGCAAATGGTTATGCAGCCTTGAGAGATGCTTTGGCTTCTGACAACGTGAGATTCCAGAGGAAAGCTCTGAACTTGATTCAGTTGCTACTGCATGAGAATAGCTCTGATTGCACCGTAGTAACGGAGCTAGGATTTCCACGCATAATGTTGCACCTTGCCTCTAGCGAAGATCTAGAAGTACGAGAAGCTGCACTTCGGGGCCTTCTTGTGCTCGCTCAAGACAAAACTGATGGGGCCAATAGTAGGTTAGCTGATGAAGATGAGAAGTTGAAGCAACTTCTTCAAGAACGAATTAAAGGTATAAGTTCGATGTCTCCTGAAGATCTAGGGGCAGCTAAAGAAGAGAGACAGCTGGTGGACTCACTCTGGAATGCCTGCTACAACGAGCCATCTTCTCTTTGTGAGAAGGGGCTTCTTGTTCTCCCTGGGGAAGATGGACCGCCACCTGATATTGCAAGCAAGCTTTTTGAACCTCGTCTTAGAGCTTTCTCTCCAAATCCTGCTGATACAAAACCTGCTACGGAGACGAAAGAAGCTCCTCCTTTGCTGCTAGGATTAGGTCCTCCATCCGAGGCTGCAAATGCTCAAGGTAGTTCTGGTGACAGAGATGATACGAATGGTAGCTCACATTCGAATTAA

Protein Analysis

395

Amino Acids

42.89

Weight (kDa)

4.83

Isoelectric Point (pI)

42.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fes1 PF08609 9 - 95 4.4e-11 Nucleotide exchange factor Fes1
SIL1 PF16782 72 - 217 2.6e-06 Nucleotide exchange factor SIL1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 464
Acc36I ACCTGC 1 cut(s) 1069
AccB7I CCANNNNNTGG 1 cut(s) 406
AciI CCGC 3 cut(s) 5, 12, 986
AcoI YGGCCR 1 cut(s) 273
AcsI RAATTY 1 cut(s) 328
AcuI CTGAAG 1 cut(s) 885
AfaI GTAC 1 cut(s) 726
AfiI CCNNNNNNNGG 4 cut(s) 314, 352, 406, 789
AflII CTTAAG 1 cut(s) 323
AgsI TTSAA 3 cut(s) 817, 830, 1016
AjiI CACGTC 1 cut(s) 271
AjnI CCWGG 1 cut(s) 970
Alw21I GWGCWC 1 cut(s) 759
Alw26I GTCTC 3 cut(s) 864, 886, 1064
AoxI GGCC 3 cut(s) 273, 745, 780
ApeKI GCWGC 6 cut(s) 356, 560, 734, 878, 1093, 1121
ApoI RAATTY 1 cut(s) 328
AspS9I GGNCC 6 cut(s) 14, 304, 745, 780, 983, 1106
AsuC2I CCSGG 1 cut(s) 525
AsuHPI GGTGA 1 cut(s) 1157
AsuII TTCGAA 2 cut(s) 475, 1178
AvaII GGWCC 4 cut(s) 14, 304, 983, 1106
AxyI CCTNAGG 1 cut(s) 183
BalI TGGCCA 1 cut(s) 275
Bbv12I GWGCWC 1 cut(s) 759
BbvI GCAGC 6 cut(s) 343, 572, 721, 890, 1080, 1108
BccI CCATC 4 cut(s) 770, 943, 974, 1120
BceAI ACGGC 2 cut(s) 25, 76
BciT130I CCWGG 1 cut(s) 972
BcnI CCSGG 1 cut(s) 525
BcoDI GTCTC 3 cut(s) 864, 886, 1064
BfaI CTAG 6 cut(s) 449, 674, 708, 719, 872, 1097
BfmI CTRYAG 1 cut(s) 357
BfrI CTTAAG 1 cut(s) 323
BfuAI ACCTGC 1 cut(s) 1069
BglII AGATCT 2 cut(s) 715, 868
BisI GCNGC 6 cut(s) 357, 561, 735, 879, 1094, 1122
BlsI GCNGC 6 cut(s) 358, 562, 736, 880, 1095, 1123
Bme1390I CCNGG 2 cut(s) 525, 972
Bme18I GGWCC 4 cut(s) 14, 304, 983, 1106
BmgBI CACGTC 1 cut(s) 271
BmgT120I GGNCC 6 cut(s) 14, 304, 745, 780, 983, 1106
BmiI GGNNCC 5 cut(s) 16, 44, 306, 746, 781
BmrFI CCNGG 2 cut(s) 525, 972
BmrI ACTGGG 1 cut(s) 31
BmsI GCATC 3 cut(s) 108, 461, 562
BmuI ACTGGG 1 cut(s) 31
BplI GAGNNNNNCTC 6 cut(s) 34, 66, 595, 627, 632, 664
Bpu10I CCTNAGC 1 cut(s) 201
Bpu14I TTCGAA 2 cut(s) 475, 1178
BpuEI CTTGAG 3 cut(s) 586, 747, 1116
BpuMI CCSGG 1 cut(s) 525
Bsa29I ATCGAT 1 cut(s) 135
BsaJI CCNNGG 4 cut(s) 487, 970, 971, 1116
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 4 cut(s) 314, 352, 406, 789
Bse1I ACTGG 1 cut(s) 26
Bse21I CCTNAGG 1 cut(s) 183
BseBI CCWGG 1 cut(s) 972
BseCI ATCGAT 1 cut(s) 135
BseDI CCNNGG 4 cut(s) 487, 970, 971, 1116
BseGI GGATG 3 cut(s) 156, 244, 1112
BseLI CCNNNNNNNGG 4 cut(s) 314, 352, 406, 789
BseMII CTCAG 3 cut(s) 74, 174, 215
BseNI ACTGG 1 cut(s) 26
BseRI GAGGAG 2 cut(s) 104, 1074
BseXI GCAGC 6 cut(s) 343, 572, 721, 890, 1080, 1108
BsgI GTGCAG 1 cut(s) 720
BshFI GGCC 3 cut(s) 275, 747, 782
BshVI ATCGAT 1 cut(s) 135
BsiHKAI GWGCWC 1 cut(s) 759
BsiSI CCGG 2 cut(s) 511, 525
BslFI GGGAC 2 cut(s) 109, 290
BslI CCNNNNNNNGG 4 cut(s) 314, 352, 406, 789
BsmAI GTCTC 3 cut(s) 864, 886, 1064
BsmBI CGTCTC 1 cut(s) 1064
BsmFI GGGAC 2 cut(s) 109, 290
BsmI GAATGC 1 cut(s) 922
BsnI GGCC 3 cut(s) 275, 747, 782
Bsp119I TTCGAA 2 cut(s) 475, 1178
Bsp1286I GDGCHC 1 cut(s) 759
Bsp143I GATC 3 cut(s) 280, 715, 868
BspACI CCGC 3 cut(s) 5, 12, 986
BspANI GGCC 3 cut(s) 275, 747, 782
BspCNI CTCAG 3 cut(s) 75, 175, 214
BspDI ATCGAT 1 cut(s) 135
BspLI GGNNCC 5 cut(s) 16, 44, 306, 746, 781
BspMAI CTGCAG 1 cut(s) 361
BspMI ACCTGC 1 cut(s) 1069
BspT104I TTCGAA 2 cut(s) 475, 1178
BspTI CTTAAG 1 cut(s) 323
BsrI ACTGG 1 cut(s) 26
BssECI CCNNGG 4 cut(s) 487, 970, 971, 1116
BssMI GATC 3 cut(s) 280, 715, 868
BssT1I CCWWGG 1 cut(s) 487
Bst2UI CCWGG 1 cut(s) 972
Bst4CI ACNGT 2 cut(s) 472, 661
Bst6I CTCTTC 2 cut(s) 315, 882
BstAFI CTTAAG 1 cut(s) 323
BstAPI GCANNNNNTGC 1 cut(s) 356
BstBI TTCGAA 2 cut(s) 475, 1178
BstC8I GCNNGC 5 cut(s) 401, 759, 922, 1003, 1007
BstDEI CTNAG 5 cut(s) 83, 183, 201, 427, 1025
BstEII GGTNACC 1 cut(s) 317
BstF5I GGATG 3 cut(s) 156, 244, 1112
BstKTI GATC 3 cut(s) 283, 718, 871
BstMAI GTCTC 3 cut(s) 864, 886, 1064
BstMBI GATC 3 cut(s) 280, 715, 868
BstMWI GCNNNNNNNGC 7 cut(s) 75, 84, 172, 356, 491, 654, 1127
BstNI CCWGG 1 cut(s) 972
BstNSI RCATGY 1 cut(s) 257
BstPI GGTNACC 1 cut(s) 317
BstSCI CCNGG 2 cut(s) 523, 970
BstSFI CTRYAG 1 cut(s) 357
BstV1I GCAGC 6 cut(s) 343, 572, 721, 890, 1080, 1108
BstX2I RGATCY 2 cut(s) 715, 868
BstXI CCANNNNNNTGG 1 cut(s) 271
BstYI RGATCY 2 cut(s) 715, 868
Bsu15I ATCGAT 1 cut(s) 135
Bsu36I CCTNAGG 1 cut(s) 183
BsuRI GGCC 3 cut(s) 275, 747, 782
BsuTUI ATCGAT 1 cut(s) 135
BtgZI GCGATG 1 cut(s) 131
BtrI CACGTC 1 cut(s) 271
BtsCI GGATG 3 cut(s) 156, 244, 1112
BtsI GCAGTG 1 cut(s) 531
BtsIMutI CAGTG 1 cut(s) 531
BveI ACCTGC 1 cut(s) 1069
Cac8I GCNNGC 5 cut(s) 401, 759, 922, 1003, 1007
Cfr13I GGNCC 6 cut(s) 14, 304, 745, 780, 983, 1106
ClaI ATCGAT 1 cut(s) 135
Csp6I GTAC 1 cut(s) 725
CviAII CATG 3 cut(s) 254, 335, 638
CviQI GTAC 1 cut(s) 725
DdeI CTNAG 5 cut(s) 83, 183, 201, 427, 1025
DpnI GATC 3 cut(s) 282, 717, 870
DpnII GATC 3 cut(s) 280, 715, 868
DrdI GACNNNNNNGTC 1 cut(s) 464
DseDI GACNNNNNNGTC 1 cut(s) 464
EaeI YGGCCR 1 cut(s) 273
Eam1104I CTCTTC 2 cut(s) 315, 882
EarI CTCTTC 2 cut(s) 315, 882
EciI GGCGGA 2 cut(s) 20, 27
Eco130I CCWWGG 1 cut(s) 487
Eco32I GATATC 1 cut(s) 162
Eco47I GGWCC 4 cut(s) 14, 304, 983, 1106
Eco57I CTGAAG 1 cut(s) 885
Eco81I CCTNAGG 1 cut(s) 183
Eco91I GGTNACC 1 cut(s) 317
EcoO109I RGGNCCY 2 cut(s) 745, 1106
EcoO65I GGTNACC 1 cut(s) 317
EcoRI GAATTC 1 cut(s) 328
EcoRII CCWGG 1 cut(s) 970
EcoRV GATATC 1 cut(s) 162
EcoT14I CCWWGG 1 cut(s) 487
ErhI CCWWGG 1 cut(s) 487
Esp3I CGTCTC 1 cut(s) 1064
FaeI CATG 3 cut(s) 257, 338, 641
FaiI YATR 9 cut(s) 110, 224, 255, 336, 413, 558, 639, 689, 848
FalI AAGNNNNNCTT 2 cut(s) 723, 755
FaqI GGGAC 2 cut(s) 109, 290
FatI CATG 3 cut(s) 253, 334, 637
Fnu4HI GCNGC 6 cut(s) 357, 561, 735, 879, 1094, 1122
FokI GGATG 3 cut(s) 163, 251, 1099
Fsp4HI GCNGC 6 cut(s) 357, 561, 735, 879, 1094, 1122
FspBI CTAG 6 cut(s) 449, 674, 708, 719, 872, 1097
GluI GCNGC 6 cut(s) 357, 561, 735, 879, 1094, 1122
HaeIII GGCC 3 cut(s) 275, 747, 782
HapII CCGG 2 cut(s) 511, 525
Hin1II CATG 3 cut(s) 257, 338, 641
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 4 cut(s) 260, 597, 622, 905
HpaII CCGG 2 cut(s) 511, 525
HphI GGTGA 1 cut(s) 1157
Hpy166II GTNNAC 2 cut(s) 441, 904
Hpy188I TCNGA 7 cut(s) 58, 84, 457, 586, 615, 652, 1117
Hpy188III TCNNGA 8 cut(s) 182, 382, 601, 719, 764, 830, 863, 913
Hpy8I GTNNAC 2 cut(s) 441, 904
Hpy99I CGWCG 1 cut(s) 62
HpyAV CCTTC 4 cut(s) 20, 148, 758, 946
HpyCH4III ACNGT 2 cut(s) 472, 661
HpyCH4IV ACGT 3 cut(s) 189, 270, 591
HpyF10VI GCNNNNNNNGC 7 cut(s) 75, 84, 172, 356, 491, 654, 1127
HpyF3I CTNAG 5 cut(s) 83, 183, 201, 427, 1025
HpySE526I ACGT 3 cut(s) 189, 270, 591
Hsp92II CATG 3 cut(s) 257, 338, 641
Kzo9I GATC 3 cut(s) 280, 715, 868
LmnI GCTCC 5 cut(s) 42, 250, 491, 670, 1087
Lsp1109I GCAGC 6 cut(s) 343, 572, 721, 890, 1080, 1108
LweI GCATC 3 cut(s) 108, 461, 562
MaeI CTAG 6 cut(s) 449, 674, 708, 719, 872, 1097
MaeII ACGT 3 cut(s) 189, 270, 591
MaeIII GTNAC 6 cut(s) 208, 317, 367, 466, 664, 1145
MalI GATC 3 cut(s) 282, 717, 870
MboI GATC 3 cut(s) 280, 715, 868
MfeI CAATTG 1 cut(s) 404
MflI RGATCY 2 cut(s) 715, 868
MhlI GDGCHC 1 cut(s) 759
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 5 cut(s) 328, 404, 495, 837, 1180
MluNI TGGCCA 1 cut(s) 275
MlyI GAGTC 2 cut(s) 269, 899
MmeI TCCRAC 3 cut(s) 81, 216, 274
Mox20I TGGCCA 1 cut(s) 275
MscI TGGCCA 1 cut(s) 275
MseI TTAA 4 cut(s) 324, 506, 840, 1183
MslI CAYNNNNRTG 1 cut(s) 269
Msp20I TGGCCA 1 cut(s) 275
MspA1I CMGCKG 1 cut(s) 898
MspCI CTTAAG 1 cut(s) 323
MspI CCGG 2 cut(s) 511, 525
MspR9I CCNGG 2 cut(s) 525, 972
MunI CAATTG 1 cut(s) 404
Mva1269I GAATGC 1 cut(s) 922
MvaI CCWGG 1 cut(s) 972
MwoI GCNNNNNNNGC 7 cut(s) 75, 84, 172, 356, 491, 654, 1127
NciI CCSGG 1 cut(s) 525
NdeII GATC 3 cut(s) 280, 715, 868
NlaIII CATG 3 cut(s) 257, 338, 641
NlaIV GGNNCC 5 cut(s) 16, 44, 306, 746, 781
NmuCI GTSAC 3 cut(s) 367, 466, 1145
NspI RCATGY 1 cut(s) 257
NspV TTCGAA 2 cut(s) 475, 1178
PasI CCCWGGG 1 cut(s) 971
PctI GAATGC 1 cut(s) 922
PfeI GAWTC 2 cut(s) 597, 622
PflMI CCANNNNNTGG 1 cut(s) 406
PkrI GCNGC 6 cut(s) 358, 562, 736, 880, 1095, 1123
PleI GAGTC 2 cut(s) 268, 899
PpsI GAGTC 2 cut(s) 268, 899
PpuMI RGGWCCY 1 cut(s) 1106
Psp5II RGGWCCY 1 cut(s) 1106
Psp6I CCWGG 1 cut(s) 970
PspEI GGTNACC 1 cut(s) 317
PspGI CCWGG 1 cut(s) 970
PspN4I GGNNCC 5 cut(s) 16, 44, 306, 746, 781
PspPI GGNCC 6 cut(s) 14, 304, 745, 780, 983, 1106
PspPPI RGGWCCY 1 cut(s) 1106
PstI CTGCAG 1 cut(s) 361
PsuI RGATCY 2 cut(s) 715, 868
PvuII CAGCTG 1 cut(s) 898
RsaI GTAC 1 cut(s) 726
RsaNI GTAC 1 cut(s) 725
RseI CAYNNNNRTG 1 cut(s) 269
SaqAI TTAA 4 cut(s) 324, 506, 840, 1183
SatI GCNGC 6 cut(s) 357, 561, 735, 879, 1094, 1122
Sau3AI GATC 3 cut(s) 280, 715, 868
Sau96I GGNCC 6 cut(s) 14, 304, 745, 780, 983, 1106
SchI GAGTC 2 cut(s) 269, 899
ScrFI CCNGG 2 cut(s) 525, 972
SduI GDGCHC 1 cut(s) 759
SfaNI GCATC 3 cut(s) 108, 461, 562
SfcI CTRYAG 1 cut(s) 357
SfuI TTCGAA 2 cut(s) 475, 1178
SinI GGWCC 4 cut(s) 14, 304, 983, 1106
SmiMI CAYNNNNRTG 1 cut(s) 269
SmlI CTYRAG 4 cut(s) 323, 565, 762, 1131
SmoI CTYRAG 4 cut(s) 323, 565, 762, 1131
Sse9I AATT 5 cut(s) 328, 404, 495, 837, 1180
SsiI CCGC 3 cut(s) 5, 12, 986
SspMI CTAG 6 cut(s) 449, 674, 708, 719, 872, 1097
StyD4I CCNGG 2 cut(s) 523, 970
StyI CCWWGG 1 cut(s) 487
TaaI ACNGT 2 cut(s) 472, 661
TaiI ACGT 3 cut(s) 192, 273, 594
TaqI TCGA 4 cut(s) 135, 475, 854, 1178
TasI AATT 5 cut(s) 328, 404, 495, 837, 1180
TfiI GAWTC 2 cut(s) 597, 622
Tru1I TTAA 4 cut(s) 324, 506, 840, 1183
Tru9I TTAA 4 cut(s) 324, 506, 840, 1183
TscAI CASTG 1 cut(s) 538
TseFI GTSAC 3 cut(s) 367, 466, 1145
TseI GCWGC 6 cut(s) 356, 560, 734, 878, 1093, 1121
Tsp45I GTSAC 3 cut(s) 367, 466, 1145
TspDTI ATGAA 2 cut(s) 167, 816
TspGWI ACGGA 5 cut(s) 112, 280, 335, 683, 1082
TspRI CASTG 1 cut(s) 538
Van91I CCANNNNNTGG 1 cut(s) 406
Vha464I CTTAAG 1 cut(s) 323
VpaK11BI GGWCC 4 cut(s) 14, 304, 983, 1106
XapI RAATTY 1 cut(s) 328
XbaI TCTAGA 1 cut(s) 718
XceI RCATGY 1 cut(s) 257
XspI CTAG 6 cut(s) 449, 674, 708, 719, 872, 1097
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.