Rh3DG123600
HSP70 Family

Hsp70 nucleotide exchange factor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
10463083 .. 10464826
1744 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG123600.1

Sequence Viewer

Length: 1152 bp
ATGGCCGGAGACGCACCCAACTGGGATGGACTGCTCAAATGGAGTCTTGCCCACTCCGACGGCACTCGCCCTAATCGAAATTTGAGCGATGAGGATCGAAAATGGTTTATGGAAGCTATGCAAGCTCAGAGTGTTGACGTTGTAAAGAGGATGAAGGAAATAACTCTTGTGATGAAAACTCCTGAGGAGGTTTTGGAAGCTCAGGGAGTTACTGCTGCTGACATTGAAGATTTGTTGGATGAGTTGCAGGAGCATGTTGAGTCCATTGACATGGCCAATGATCTTCACTCCATTGGTGGTTTGGTCCCTCTACTCGATTATCTGAAGAACTCCCATGCTAATATTCGAGCCAAGGCCGCAGAAGTTGTGACCACGATTGTGCAGAACAATCCCAAGAGCCAACAACTGGTTATGGAAGCAAATGGCTTGGAATATTTGTATTCTTTGTTCACGTCCGACCCTGATGTCACTGTTCGCACCAAAGCTCTTGGTGCAATATCCTCTTTAATTCGGGACAACAAACCTGGTGTCATTGCATTTCGTCTAGCAAATGGTTATGCAGGCTTGAGAGATGCTTTATCTTCTGAAAGCGTGAGATTTCAGAGGAAAGCTCTGAACTTGATTTCTTACCTTCTGCGTGAGAATAGTTCTGATTGCAACATAATAAGTGACCTAGGATTTCCACGCATAATGGTGCACCTTGCCTCCAGCGAAGATCTAGAAGTGCGAGAAGCTGCACTCCGGGGCCTACTTGAGCTGGCTCGAGAAAAAACTGGTGGTGCCAAGGTGACACTAGCTGAAGAAGATGAGAAATTGAAGCAGCTTCTTGAAGACCGAATTAAAGGTATCAGTCTGATGTCTCCTGAAGATCTTGGAGCAGCTAGAGAGGAGAGGCAGCTGGTAGATTCCCTATGGGGTGCCTGCTATAAGGAGCCATCTTCTCTTCGTGAGAAGGGGCTTCTTGTGCTTCCTGGGGAAGATGCACCGCCACCTGATGTTGCAAGCAAGCATTTTGAGCCTCCCCTTAGAGCATTCACTCCAAATCCTGCTCATATAAAACCTGATACTGAGAAGAAAGAAACTCCTCCACTGCTGCTAGGCGCAGGCCCTCCTCCCGAGGCTAGAGATGACTCAAATGGGAGGTTACAGTGA

Protein Analysis

383

Amino Acids

42.2

Weight (kDa)

4.98

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fes1 PF08609 9 - 95 2e-11 Nucleotide exchange factor Fes1
SIL1 PF16782 68 - 217 4.7e-06 Nucleotide exchange factor SIL1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 464
AccB1I GGYRCC 2 cut(s) 779, 917
AccB7I CCANNNNNTGG 1 cut(s) 406
AciI CCGC 2 cut(s) 357, 986
AclWI GGATC 1 cut(s) 102
AcoI YGGCCR 2 cut(s) 3, 273
AcsI RAATTY 1 cut(s) 79
AcuI CTGAAG 3 cut(s) 344, 819, 885
AfiI CCNNNNNNNGG 1 cut(s) 406
AgsI TTSAA 3 cut(s) 227, 817, 830
AjiI CACGTC 1 cut(s) 453
AjnI CCWGG 2 cut(s) 523, 970
AleI CACNNNNGTG 1 cut(s) 377
Alw21I GWGCWC 1 cut(s) 699
Alw26I GTCTC 2 cut(s) 3, 864
Alw44I GTGCAC 1 cut(s) 695
AlwI GGATC 1 cut(s) 102
Ama87I CYCGRG 2 cut(s) 762, 1115
AoxI GGCC 5 cut(s) 3, 273, 354, 745, 1105
ApaLI GTGCAC 1 cut(s) 695
ApeKI GCWGC 6 cut(s) 215, 734, 820, 878, 895, 1093
ApoI RAATTY 1 cut(s) 79
ArsI GACNNNNNNTTYG 2 cut(s) 513, 545
AspA2I CCTAGG 1 cut(s) 673
AspLEI GCGC 1 cut(s) 1103
AspS9I GGNCC 3 cut(s) 304, 745, 1106
AsuC2I CCSGG 1 cut(s) 743
AsuHPI GGTGA 1 cut(s) 799
AvaI CYCGRG 2 cut(s) 762, 1115
AvaII GGWCC 1 cut(s) 304
AvrII CCTAGG 1 cut(s) 673
AxyI CCTNAGG 1 cut(s) 183
BaeGI GKGCMC 1 cut(s) 699
BalI TGGCCA 1 cut(s) 275
BanI GGYRCC 2 cut(s) 779, 917
BbsI GAAGAC 1 cut(s) 837
Bbv12I GWGCWC 1 cut(s) 699
BbvI GCAGC 6 cut(s) 202, 721, 832, 890, 907, 1080
BccI CCATC 2 cut(s) 20, 943
BceAI ACGGC 1 cut(s) 76
BciT130I CCWGG 2 cut(s) 525, 972
BcnI CCSGG 1 cut(s) 743
BcoDI GTCTC 2 cut(s) 3, 864
BfaI CTAG 7 cut(s) 545, 674, 719, 794, 882, 1097, 1122
BglII AGATCT 2 cut(s) 715, 868
BisI GCNGC 7 cut(s) 216, 357, 735, 821, 879, 896, 1094
BlnI CCTAGG 1 cut(s) 673
BlsI GCNGC 7 cut(s) 217, 358, 736, 822, 880, 897, 1095
Bme1390I CCNGG 3 cut(s) 525, 743, 972
Bme18I GGWCC 1 cut(s) 304
BmeT110I CYCGRG 2 cut(s) 762, 1115
BmgBI CACGTC 1 cut(s) 453
BmgT120I GGNCC 3 cut(s) 304, 745, 1106
BmiI GGNNCC 5 cut(s) 306, 746, 781, 919, 933
BmrFI CCNGG 3 cut(s) 525, 743, 972
BmrI ACTGGG 1 cut(s) 31
BmsI GCATC 2 cut(s) 562, 970
BmuI ACTGGG 1 cut(s) 31
BpiI GAAGAC 1 cut(s) 837
BplI GAGNNNNNCTC 2 cut(s) 595, 627
BpmI CTGGAG 1 cut(s) 691
Bpu10I CCTNAGC 1 cut(s) 201
BpuEI CTTGAG 2 cut(s) 586, 773
BpuMI CCSGG 1 cut(s) 743
BsaBI GATNNNNATC 1 cut(s) 93
BsaJI CCNNGG 6 cut(s) 351, 673, 742, 783, 971, 1116
BsaXI ACNNNNNCTCC 2 cut(s) 689, 719
Bsc4I CCNNNNNNNGG 1 cut(s) 406
Bse1I ACTGG 3 cut(s) 26, 411, 778
Bse21I CCTNAGG 1 cut(s) 183
Bse3DI GCAATG 1 cut(s) 531
Bse8I GATNNNNATC 1 cut(s) 93
BseBI CCWGG 2 cut(s) 525, 972
BseDI CCNNGG 6 cut(s) 351, 673, 742, 783, 971, 1116
BseGI GGATG 3 cut(s) 31, 156, 244
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 1 cut(s) 406
BseMI GCAATG 1 cut(s) 531
BseMII CTCAG 4 cut(s) 140, 174, 215, 1059
BseNI ACTGG 3 cut(s) 26, 411, 778
BseRI GAGGAG 4 cut(s) 200, 902, 1074, 1101
BseSI GKGCMC 1 cut(s) 699
BseXI GCAGC 6 cut(s) 202, 721, 832, 890, 907, 1080
BsgI GTGCAG 2 cut(s) 401, 720
BshFI GGCC 5 cut(s) 5, 275, 356, 747, 1107
BshNI GGYRCC 2 cut(s) 779, 917
BsiHKAI GWGCWC 1 cut(s) 699
BsiHKCI CYCGRG 2 cut(s) 762, 1115
BsiSI CCGG 2 cut(s) 6, 742
BslFI GGGAC 2 cut(s) 290, 527
BslI CCNNNNNNNGG 1 cut(s) 406
BsmAI GTCTC 2 cut(s) 3, 864
BsmBI CGTCTC 1 cut(s) 3
BsmFI GGGAC 2 cut(s) 290, 527
BsmI GAATGC 1 cut(s) 1031
BsnI GGCC 5 cut(s) 5, 275, 356, 747, 1107
BsoBI CYCGRG 2 cut(s) 762, 1115
Bsp1286I GDGCHC 1 cut(s) 699
Bsp143I GATC 4 cut(s) 94, 280, 715, 868
BspACI CCGC 2 cut(s) 357, 986
BspANI GGCC 5 cut(s) 5, 275, 356, 747, 1107
BspCNI CTCAG 4 cut(s) 139, 175, 214, 1060
BspLI GGNNCC 5 cut(s) 306, 746, 781, 919, 933
BspPI GGATC 1 cut(s) 102
BspT107I GGYRCC 2 cut(s) 779, 917
BsrDI GCAATG 1 cut(s) 531
BsrI ACTGG 3 cut(s) 26, 411, 778
BssECI CCNNGG 6 cut(s) 351, 673, 742, 783, 971, 1116
BssMI GATC 4 cut(s) 94, 280, 715, 868
BssT1I CCWWGG 3 cut(s) 351, 673, 783
Bst2UI CCWGG 2 cut(s) 525, 972
Bst4CI ACNGT 2 cut(s) 472, 1149
Bst6I CTCTTC 1 cut(s) 948
BstC8I GCNNGC 7 cut(s) 123, 562, 759, 922, 1003, 1007, 1105
BstDEI CTNAG 5 cut(s) 126, 183, 201, 1025, 1068
BstF5I GGATG 3 cut(s) 31, 156, 244
BstHHI GCGC 1 cut(s) 1103
BstKTI GATC 4 cut(s) 97, 283, 718, 871
BstMAI GTCTC 2 cut(s) 3, 864
BstMBI GATC 4 cut(s) 94, 280, 715, 868
BstMWI GCNNNNNNNGC 6 cut(s) 11, 122, 356, 491, 964, 1015
BstNI CCWGG 2 cut(s) 525, 972
BstNSI RCATGY 1 cut(s) 257
BstSCI CCNGG 3 cut(s) 523, 741, 970
BstSLI GKGCMC 1 cut(s) 699
BstV1I GCAGC 6 cut(s) 202, 721, 832, 890, 907, 1080
BstV2I GAAGAC 1 cut(s) 837
BstX2I RGATCY 2 cut(s) 715, 868
BstXI CCANNNNNNTGG 1 cut(s) 271
BstYI RGATCY 2 cut(s) 715, 868
Bsu36I CCTNAGG 1 cut(s) 183
BsuRI GGCC 5 cut(s) 5, 275, 356, 747, 1107
BtgZI GCGATG 1 cut(s) 102
BtrI CACGTC 1 cut(s) 453
BtsCI GGATG 3 cut(s) 31, 156, 244
BtsI GCAGTG 1 cut(s) 1088
BtsIMutI CAGTG 2 cut(s) 468, 1088
Cac8I GCNNGC 7 cut(s) 123, 562, 759, 922, 1003, 1007, 1105
CfoI GCGC 1 cut(s) 1103
Cfr13I GGNCC 3 cut(s) 304, 745, 1106
CseI GACGC 1 cut(s) 20
CsiI ACCWGGT 1 cut(s) 523
CviAII CATG 3 cut(s) 254, 271, 335
DdeI CTNAG 5 cut(s) 126, 183, 201, 1025, 1068
DpnI GATC 4 cut(s) 96, 282, 717, 870
DpnII GATC 4 cut(s) 94, 280, 715, 868
DrdI GACNNNNNNGTC 1 cut(s) 464
DseDI GACNNNNNNGTC 1 cut(s) 464
EaeI YGGCCR 2 cut(s) 3, 273
Eam1104I CTCTTC 1 cut(s) 948
EarI CTCTTC 1 cut(s) 948
Eco130I CCWWGG 3 cut(s) 351, 673, 783
Eco47I GGWCC 1 cut(s) 304
Eco57I CTGAAG 3 cut(s) 344, 819, 885
Eco81I CCTNAGG 1 cut(s) 183
Eco88I CYCGRG 2 cut(s) 762, 1115
EcoO109I RGGNCCY 2 cut(s) 745, 1106
EcoRII CCWGG 2 cut(s) 523, 970
EcoT14I CCWWGG 3 cut(s) 351, 673, 783
ErhI CCWWGG 3 cut(s) 351, 673, 783
Esp3I CGTCTC 1 cut(s) 3
FaeI CATG 3 cut(s) 257, 274, 338
FaqI GGGAC 2 cut(s) 290, 527
FatI CATG 3 cut(s) 253, 270, 334
Fnu4HI GCNGC 7 cut(s) 216, 357, 735, 821, 879, 896, 1094
FokI GGATG 3 cut(s) 38, 163, 251
Fsp4HI GCNGC 7 cut(s) 216, 357, 735, 821, 879, 896, 1094
FspBI CTAG 7 cut(s) 545, 674, 719, 794, 882, 1097, 1122
GlaI GCGC 1 cut(s) 1102
GluI GCNGC 7 cut(s) 216, 357, 735, 821, 879, 896, 1094
GsuI CTGGAG 1 cut(s) 691
HaeIII GGCC 5 cut(s) 5, 275, 356, 747, 1107
HapII CCGG 2 cut(s) 6, 742
HgaI GACGC 1 cut(s) 20
HhaI GCGC 1 cut(s) 1103
Hin1II CATG 3 cut(s) 257, 274, 338
Hin6I GCGC 1 cut(s) 1101
HinP1I GCGC 1 cut(s) 1101
HincII GTYRAC 1 cut(s) 136
HindII GTYRAC 1 cut(s) 136
HinfI GANTC 4 cut(s) 43, 260, 905, 1130
HpaII CCGG 2 cut(s) 6, 742
HphI GGTGA 1 cut(s) 799
Hpy166II GTNNAC 3 cut(s) 136, 450, 697
Hpy188I TCNGA 9 cut(s) 58, 129, 324, 457, 586, 603, 615, 652, 855
Hpy188III TCNNGA 8 cut(s) 182, 512, 719, 764, 827, 863, 947, 1115
Hpy8I GTNNAC 3 cut(s) 136, 450, 697
Hpy99I CGWCG 1 cut(s) 62
HpyAV CCTTC 3 cut(s) 148, 641, 946
HpyCH4III ACNGT 2 cut(s) 472, 1149
HpyCH4IV ACGT 2 cut(s) 138, 452
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 122, 356, 491, 964, 1015
HpyF3I CTNAG 5 cut(s) 126, 183, 201, 1025, 1068
HpySE526I ACGT 2 cut(s) 138, 452
Hsp92II CATG 3 cut(s) 257, 274, 338
HspAI GCGC 1 cut(s) 1101
Kzo9I GATC 4 cut(s) 94, 280, 715, 868
LmnI GCTCC 3 cut(s) 250, 875, 931
Lsp1109I GCAGC 6 cut(s) 202, 721, 832, 890, 907, 1080
LweI GCATC 2 cut(s) 562, 970
MabI ACCWGGT 1 cut(s) 523
MaeI CTAG 7 cut(s) 545, 674, 719, 794, 882, 1097, 1122
MaeII ACGT 2 cut(s) 138, 452
MaeIII GTNAC 6 cut(s) 208, 367, 466, 668, 787, 1143
MalI GATC 4 cut(s) 96, 282, 717, 870
MboI GATC 4 cut(s) 94, 280, 715, 868
MflI RGATCY 2 cut(s) 715, 868
MhlI GDGCHC 1 cut(s) 699
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 4 cut(s) 79, 507, 812, 837
MluNI TGGCCA 1 cut(s) 275
MlyI GAGTC 3 cut(s) 52, 269, 1124
MmeI TCCRAC 3 cut(s) 81, 216, 480
Mox20I TGGCCA 1 cut(s) 275
MscI TGGCCA 1 cut(s) 275
MseI TTAA 2 cut(s) 506, 840
MslI CAYNNNNRTG 3 cut(s) 269, 377, 692
Msp20I TGGCCA 1 cut(s) 275
MspA1I CMGCKG 1 cut(s) 898
MspI CCGG 2 cut(s) 6, 742
MspR9I CCNGG 3 cut(s) 525, 743, 972
Mva1269I GAATGC 1 cut(s) 1031
MvaI CCWGG 2 cut(s) 525, 972
MwoI GCNNNNNNNGC 6 cut(s) 11, 122, 356, 491, 964, 1015
NciI CCSGG 1 cut(s) 743
NdeII GATC 4 cut(s) 94, 280, 715, 868
NlaIII CATG 3 cut(s) 257, 274, 338
NlaIV GGNNCC 5 cut(s) 306, 746, 781, 919, 933
NmuCI GTSAC 4 cut(s) 367, 466, 668, 787
NspI RCATGY 1 cut(s) 257
OliI CACNNNNGTG 1 cut(s) 377
PaeR7I CTCGAG 1 cut(s) 762
PcsI WCGNNNNNNNCGW 1 cut(s) 73
PctI GAATGC 1 cut(s) 1031
PfeI GAWTC 1 cut(s) 905
PflMI CCANNNNNTGG 1 cut(s) 406
PkrI GCNGC 7 cut(s) 217, 358, 736, 822, 880, 897, 1095
PleI GAGTC 3 cut(s) 51, 268, 1124
PpsI GAGTC 3 cut(s) 51, 268, 1124
Psp6I CCWGG 2 cut(s) 523, 970
PspGI CCWGG 2 cut(s) 523, 970
PspN4I GGNNCC 5 cut(s) 306, 746, 781, 919, 933
PspPI GGNCC 3 cut(s) 304, 745, 1106
PsrI GAACNNNNNNTAC 2 cut(s) 431, 463
PsuI RGATCY 2 cut(s) 715, 868
PvuII CAGCTG 1 cut(s) 898
RseI CAYNNNNRTG 3 cut(s) 269, 377, 692
SaqAI TTAA 2 cut(s) 506, 840
SatI GCNGC 7 cut(s) 216, 357, 735, 821, 879, 896, 1094
Sau3AI GATC 4 cut(s) 94, 280, 715, 868
Sau96I GGNCC 3 cut(s) 304, 745, 1106
SchI GAGTC 3 cut(s) 52, 269, 1124
ScrFI CCNGG 3 cut(s) 525, 743, 972
SduI GDGCHC 1 cut(s) 699
SexAI ACCWGGT 1 cut(s) 523
SfaNI GCATC 2 cut(s) 562, 970
Sfr274I CTCGAG 1 cut(s) 762
SinI GGWCC 1 cut(s) 304
SlaI CTCGAG 1 cut(s) 762
SmiMI CAYNNNNRTG 3 cut(s) 269, 377, 692
SmlI CTYRAG 3 cut(s) 565, 752, 762
SmoI CTYRAG 3 cut(s) 565, 752, 762
Sse9I AATT 4 cut(s) 79, 507, 812, 837
SsiI CCGC 2 cut(s) 357, 986
SspI AATATT 2 cut(s) 343, 434
SspMI CTAG 7 cut(s) 545, 674, 719, 794, 882, 1097, 1122
StyD4I CCNGG 3 cut(s) 523, 741, 970
StyI CCWWGG 3 cut(s) 351, 673, 783
TaaI ACNGT 2 cut(s) 472, 1149
TaiI ACGT 2 cut(s) 141, 455
TaqI TCGA 5 cut(s) 76, 97, 315, 346, 763
TaqII GACCGA 1 cut(s) 849
TasI AATT 4 cut(s) 79, 507, 812, 837
TauI GCSGC 1 cut(s) 359
TfiI GAWTC 1 cut(s) 905
Tru1I TTAA 2 cut(s) 506, 840
Tru9I TTAA 2 cut(s) 506, 840
TscAI CASTG 2 cut(s) 475, 1095
TseFI GTSAC 4 cut(s) 367, 466, 668, 787
TseI GCWGC 6 cut(s) 215, 734, 820, 878, 895, 1093
Tsp45I GTSAC 4 cut(s) 367, 466, 668, 787
TspDTI ATGAA 2 cut(s) 167, 188
TspRI CASTG 2 cut(s) 475, 1095
Van91I CCANNNNNTGG 1 cut(s) 406
VneI GTGCAC 1 cut(s) 695
VpaK11BI GGWCC 1 cut(s) 304
XapI RAATTY 1 cut(s) 79
XbaI TCTAGA 1 cut(s) 718
XceI RCATGY 1 cut(s) 257
XcmI CCANNNNNNNNNTGG 1 cut(s) 298
XhoI CTCGAG 1 cut(s) 762
XmaJI CCTAGG 1 cut(s) 673
XspI CTAG 7 cut(s) 545, 674, 719, 794, 882, 1097, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.