Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0006676

Physical Location & Seq

Genomic Coordinates Reverse (-)

26837628 .. 26840220

Gene Structure 2593 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1177100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGGGATGGTTTCTGAAAACCCTTTTTCTTTTTCAAACCGCTCTCCAACTCCTAAGCTCTGCAGTTCCTTCACCACTCGTATCTTTTCAGATGTTGCCGGGGACATTACAATCGTCGTGGATGGAGAGTCTTTCTTGCTGCATAAGTTTCCACTGGTGTCTAGAAGTGGAAAGATTCGGAAAATGGTTGCAGACACCAAGGATTCATCGGCAAAATTGGAGCTCCTCGACATACCAGGAGGGGCGCAGGCATTTGAACTCGCAATGAAATTCTGTTATGGCATAAACTTTGAGATCACAACTGTAAATGTAGCCCATCTGCGTTGCGCTGCAGAGTACTTGGAAATGACTGAAGACTACAGGGATGAAAACCTCATTGCACGAACGGAGACTTATCTGAGTGAAGTTGTAGTTGAGAGTCTCGAAAAGTCAGTAGAAGTCCTTGCCACGTGTGAGACGCTACCTTCTATAGCGGAGGAGGTTGAAATTCCTAGTAGATGTGTGGAGGCTATTGCCATGAATGCTTGCAAGGAACAATTAGTATCAGGGTTGTCAATGTTAAGTTGTGGCGGTGAGTCTACAGAGCTTAAGAGTGATCGTCTTGAGTGGTGGGTTGAAGATCTCTCGATTCTGAGGATCGATTATTATCAAAGGGTTATATGTGCTATGACAAGACTAGGTGTTCGACCGGATAGCATTTTTGCATCTTTGATGCATTTTGCTCAAGCATCCTTGAAGGGAATCGGAAAATGTCAAATTTGGAATCCAGGAAAAGTGAAGCCAATTGCTGGCATGGCAGAACATGACCAGAAAACCGTTGTGGAAACCCTCGTTAGCTTAATGCCAACAGAGAAAAGTTGTTCGGTGCCATTGAGTTTTATGTTTGGAATGCTGAGAATGGCAATAATGGTGGATGCAACAATAGCCTGCAGGCTTGAGCTCGAAAGGAGGATTGCTTTACGGTTGGAAATGGTTTCGATTGATGATCTCCTTATACCCTCAATCCAAGCAGGGGGTTCGTTGTATGATGTTGACACCGTTCATCGAATACTGGTGAATTTTCTGCAGCGGATTGAGGAAGAAGAAGAAAGTGAAGATTGTGGATATGAGTCCGAAGGCCTTGGTTCTCCGAGTCATGGTTCATTATTGAAAGTTGGAAAGCTTATTGACTCATATCTAGCTGAAATTGCTCCTGATCCTTACCTGAGCTTACCAAAATTCATTGCCATGATTGAAATACTGCCCGATTATGCACGTGTGATTGATGACGGGATTTACAGGGCGGTGGATATATATTTGAAGGTTCATTCAATGATCACTGAACAAGAATGCAAGAAGCTGTGCAAGTTCATAAACTGCCAAAAGCTCTCTCAAGAAGCCTGCAATCACGCTGCACAAAACGATAGACTCCCAGTCAAGATGACAGTGCAAGTCCTGTACTTCGAGCAGCTCCGCTTGAAGAATGCATTGTCTGGAAGCTCAGGAGACGGGTTCCCCTCGCAGAGAATAAGCAGTGGTGTGCCAAGCGCAGCCATGTCCCCTCGAGACAACTATGCTTCGTTAAGGAGAGAAAACCGAGAACTGAAGCTGGAGATTTCGAGAATGAGAGTGAGGCTGAGTGAATTGGAGAAAGAGCAGTTGTTTATGAAACAAGGAATGATGGATAAAACAGGACACGGGAAGACTTTCTTGACCTCACTCTCTAAAGGGATCGGAAGGATTGGGATTTTTAATGGCCAAGCGGGAGGCAAACCGAAGAAATCAGGTCGGAAGTCCCGGGGATCTGAGGGGAAAACTGGTAGGAGTAAAAGATATTCTGTTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

609

Amino Acids

67.61

Weight (kDa)

6.11

Isoelectric Point (pI)

42.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	35 - 118	1.4e-07	BTB/POZ domain
NPH3	PF03000	202 - 461	3.3e-88	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08570 AT3G08660 AT3G08660 AT3G08660
fragaria_vesca	FvH4_6g09490 FvH4_6g09490 FvH4_6g09490 FvH4_6g09490
malus_domestica	MD04G1177100.v1.1 MD12G1192300.v1.1
prunus_persica	Prupe.6G296800_v2.0.a1 Prupe.6G296800_v2.0.a1
pyrus_communis	pycom04g15640 pycom12g17930
rosa_chinensis	RchiOBHm_Chr3g0460071
rosa_laevigata	RLG00000025046
rosa_multiflora	Rmu_sc0000449.1_g000056 Rmu_sc0007694.1_g000002
rosa_roxburghii	Rroxscaffold_6G00419870
rosa_rugosa	Rorug03G0039200 Rorug03G0039300
rosa_samantha	Rh3AG097700 Rh3BG100800 Rh3CG102900 Rh3DG102100
rosa_wichuraiana	Rw3G008240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	865
AccB7I	CCANNNNNTGG	1 cut(s)	788
AccBSI	CCGCTC	1 cut(s)	42
AccI	GTMKAC	1 cut(s)	578
AciI	CCGC	7 cut(s)	40, 473, 570, 1069, 1283, 1453, 1742
AclWI	GGATC	4 cut(s)	644, 1190, 1718, 1789
AcoI	YGGCCR	1 cut(s)	1735
AcsI	RAATTY	5 cut(s)	269, 486, 756, 1057, 1217
AcuI	CTGAAG	2 cut(s)	372, 1604
AcvI	CACGTG	2 cut(s)	450, 1256
AfaI	GTAC	2 cut(s)	338, 1439
AfiI	CCNNNNNNNGG	3 cut(s)	788, 1012, 1136
AflII	CTTAAG	1 cut(s)	587
AflIII	ACRYGT	2 cut(s)	449, 1255
AhdI	GACNNNNNGTC	1 cut(s)	1412
AjnI	CCWGG	2 cut(s)	235, 766
Alw21I	GWGCWC	2 cut(s)	225, 942
Alw26I	GTCTC	5 cut(s)	383, 425, 449, 1479, 1539
AlwI	GGATC	4 cut(s)	644, 1190, 1718, 1789
Ama87I	CYCGRG	2 cut(s)	1542, 1776
AoxI	GGCC	2 cut(s)	1117, 1735
ApeKI	GCWGC	6 cut(s)	139, 329, 1066, 1391, 1447, 1529
ApoI	RAATTY	5 cut(s)	269, 486, 756, 1057, 1217
ArsI	GACNNNNNNTTYG	2 cut(s)	666, 698
Asp700I	GAANNNNTTC	1 cut(s)	1685
AspLEI	GCGC	3 cut(s)	247, 329, 1529
AsuC2I	CCSGG	3 cut(s)	100, 1777, 1778
AsuHPI	GGTGA	3 cut(s)	64, 584, 1066
AvaI	CYCGRG	2 cut(s)	1542, 1776
BalI	TGGCCA	1 cut(s)	1737
BanI	GGYRCC	1 cut(s)	865
BanII	GRGCYC	2 cut(s)	225, 942
BbrPI	CACGTG	2 cut(s)	450, 1256
BbsI	GAAGAC	2 cut(s)	360, 1688
Bbv12I	GWGCWC	2 cut(s)	225, 942
BbvI	GCAGC	6 cut(s)	126, 316, 1078, 1378, 1459, 1541
BccI	CCATC	3 cut(s)	116, 324, 1654
BcgI	CGANNNNNNTGC	2 cut(s)	999, 1033
BciT130I	CCWGG	2 cut(s)	237, 768
BclI	TGATCA	1 cut(s)	1314
BcnI	CCSGG	3 cut(s)	100, 1777, 1778
BcoDI	GTCTC	5 cut(s)	383, 425, 449, 1479, 1539
BfaI	CTAG	5 cut(s)	162, 492, 677, 1178, 1825
BfmI	CTRYAG	7 cut(s)	61, 330, 358, 468, 579, 928, 1064
BfrI	CTTAAG	1 cut(s)	587
BglII	AGATCT	1 cut(s)	619
BisI	GCNGC	6 cut(s)	140, 330, 1067, 1392, 1448, 1530
BlsI	GCNGC	6 cut(s)	141, 331, 1068, 1393, 1449, 1531
BmcAI	AGTACT	1 cut(s)	338
Bme1390I	CCNGG	5 cut(s)	100, 237, 768, 1777, 1778
BmeRI	GACNNNNNGTC	1 cut(s)	1412
BmeT110I	CYCGRG	2 cut(s)	1542, 1776
BmiI	GGNNCC	2 cut(s)	867, 1493
BmrFI	CCNGG	5 cut(s)	100, 237, 768, 1777, 1778
BmrI	ACTGGG	1 cut(s)	1406
BmsI	GCATC	4 cut(s)	702, 713, 737, 904
BmuI	ACTGGG	1 cut(s)	1406
BpiI	GAAGAC	2 cut(s)	360, 1688
BpmI	CTGGAG	1 cut(s)	1610
Bpu10I	CCTNAGC	3 cut(s)	54, 1205, 1480
BpuEI	CTTGAG	4 cut(s)	623, 708, 956, 1356
BpuMI	CCSGG	3 cut(s)	100, 1777, 1778
Bsa29I	ATCGAT	1 cut(s)	639
BsaAI	YACGTR	2 cut(s)	450, 1256
BsaBI	GATNNNNATC	1 cut(s)	645
BsaJI	CCNNGG	5 cut(s)	99, 198, 1120, 1776, 1777
BsaWI	WCCGGW	1 cut(s)	688
Bsc4I	CCNNNNNNNGG	3 cut(s)	788, 1012, 1136
Bse1I	ACTGG	4 cut(s)	159, 1056, 1412, 1801
Bse3DI	GCAATG	3 cut(s)	270, 375, 1221
Bse8I	GATNNNNATC	1 cut(s)	645
BseBI	CCWGG	2 cut(s)	237, 768
BseCI	ATCGAT	1 cut(s)	639
BseDI	CCNNGG	5 cut(s)	99, 198, 1120, 1776, 1777
BseGI	GGATG	5 cut(s)	12, 127, 370, 728, 919
BseJI	GATNNNNATC	1 cut(s)	645
BseLI	CCNNNNNNNGG	3 cut(s)	788, 1012, 1136
BseMI	GCAATG	3 cut(s)	270, 375, 1221
BseMII	CTCAG	7 cut(s)	389, 623, 884, 1196, 1494, 1607, 1776
BseNI	ACTGG	4 cut(s)	159, 1056, 1412, 1801
BseRI	GAGGAG	2 cut(s)	215, 491
BseXI	GCAGC	6 cut(s)	126, 316, 1078, 1378, 1459, 1541
BsgI	GTGCAG	1 cut(s)	1377
Bsh1285I	CGRYCG	1 cut(s)	689
BshFI	GGCC	2 cut(s)	1119, 1737
BshNI	GGYRCC	1 cut(s)	865
BshVI	ATCGAT	1 cut(s)	639
BsiEI	CGRYCG	1 cut(s)	689
BsiHKAI	GWGCWC	2 cut(s)	225, 942
BsiHKCI	CYCGRG	2 cut(s)	1542, 1776
BsiSI	CCGG	3 cut(s)	99, 689, 1777
BslFI	GGGAC	3 cut(s)	116, 1522, 1759
BslI	CCNNNNNNNGG	3 cut(s)	788, 1012, 1136
BsmAI	GTCTC	5 cut(s)	383, 425, 449, 1479, 1539
BsmBI	CGTCTC	2 cut(s)	449, 1479
BsmFI	GGGAC	3 cut(s)	116, 1522, 1759
BsmI	GAATGC	4 cut(s)	526, 894, 1334, 1468
BsnI	GGCC	2 cut(s)	1119, 1737
BsoBI	CYCGRG	2 cut(s)	1542, 1776
Bsp1286I	GDGCHC	2 cut(s)	225, 942
Bsp143I	GATC	9 cut(s)	294, 595, 619, 636, 985, 1195, 1314, 1710, 1781
BspACI	CCGC	7 cut(s)	40, 473, 570, 1069, 1283, 1453, 1742
BspANI	GGCC	2 cut(s)	1119, 1737
BspCNI	CTCAG	7 cut(s)	390, 624, 885, 1197, 1493, 1608, 1777
BspDI	ATCGAT	1 cut(s)	639
BspLI	GGNNCC	2 cut(s)	867, 1493
BspMAI	CTGCAG	4 cut(s)	65, 334, 932, 1068
BspPI	GGATC	4 cut(s)	644, 1190, 1718, 1789
BspT107I	GGYRCC	1 cut(s)	865
BspTI	CTTAAG	1 cut(s)	587
BsrBI	CCGCTC	1 cut(s)	42
BsrDI	GCAATG	3 cut(s)	270, 375, 1221
BsrI	ACTGG	4 cut(s)	159, 1056, 1412, 1801
BssECI	CCNNGG	5 cut(s)	99, 198, 1120, 1776, 1777
BssMI	GATC	9 cut(s)	294, 595, 619, 636, 985, 1195, 1314, 1710, 1781
BssT1I	CCWWGG	2 cut(s)	198, 1120
Bst2UI	CCWGG	2 cut(s)	237, 768
Bst4CI	ACNGT	5 cut(s)	304, 817, 963, 1039, 1426
BstAFI	CTTAAG	1 cut(s)	587
BstBAI	YACGTR	2 cut(s)	450, 1256
BstC8I	GCNNGC	6 cut(s)	249, 526, 790, 928, 932, 1381
BstDEI	CTNAG	8 cut(s)	54, 398, 632, 893, 1205, 1480, 1616, 1785
BstF5I	GGATG	5 cut(s)	12, 127, 370, 728, 919
BstHHI	GCGC	3 cut(s)	247, 329, 1529
BstKTI	GATC	9 cut(s)	297, 598, 622, 639, 988, 1198, 1317, 1713, 1784
BstMAI	GTCTC	5 cut(s)	383, 425, 449, 1479, 1539
BstMBI	GATC	9 cut(s)	294, 595, 619, 636, 985, 1195, 1314, 1710, 1781
BstMCI	CGRYCG	1 cut(s)	689
BstMWI	GCNNNNNNNGC	4 cut(s)	521, 794, 923, 1187
BstNI	CCWGG	2 cut(s)	237, 768
BstSCI	CCNGG	5 cut(s)	98, 235, 766, 1775, 1776
BstSFI	CTRYAG	7 cut(s)	61, 330, 358, 468, 579, 928, 1064
BstV1I	GCAGC	6 cut(s)	126, 316, 1078, 1378, 1459, 1541
BstV2I	GAAGAC	2 cut(s)	360, 1688
BstX2I	RGATCY	2 cut(s)	619, 1781
BstYI	RGATCY	2 cut(s)	619, 1781
Bsu15I	ATCGAT	1 cut(s)	639
BsuRI	GGCC	2 cut(s)	1119, 1737
BsuTUI	ATCGAT	1 cut(s)	639
BtsCI	GGATG	5 cut(s)	12, 127, 370, 728, 919
BtsI	GCAGTG	1 cut(s)	1519
BtsIMutI	CAGTG	4 cut(s)	152, 1317, 1431, 1519
Cac8I	GCNNGC	6 cut(s)	249, 526, 790, 928, 932, 1381
CfoI	GCGC	3 cut(s)	247, 329, 1529
Cfr9I	CCCGGG	1 cut(s)	1776
ClaI	ATCGAT	1 cut(s)	639
CseI	GACGC	1 cut(s)	466
Csp6I	GTAC	2 cut(s)	337, 1438
CspCI	CAANNNNNGTGG	4 cut(s)	99, 134, 891, 926
CviAII	CATG	6 cut(s)	517, 793, 803, 1136, 1228, 1534
CviQI	GTAC	2 cut(s)	337, 1438
DdeI	CTNAG	8 cut(s)	54, 398, 632, 893, 1205, 1480, 1616, 1785
DpnI	GATC	9 cut(s)	296, 597, 621, 638, 987, 1197, 1316, 1712, 1783
DpnII	GATC	9 cut(s)	294, 595, 619, 636, 985, 1195, 1314, 1710, 1781
DriI	GACNNNNNGTC	1 cut(s)	1412
EaeI	YGGCCR	1 cut(s)	1735
Eam1105I	GACNNNNNGTC	1 cut(s)	1412
Ecl136II	GAGCTC	2 cut(s)	223, 940
Eco130I	CCWWGG	2 cut(s)	198, 1120
Eco147I	AGGCCT	1 cut(s)	1119
Eco24I	GRGCYC	2 cut(s)	225, 942
Eco53kI	GAGCTC	2 cut(s)	223, 940
Eco57I	CTGAAG	2 cut(s)	372, 1604
Eco72I	CACGTG	2 cut(s)	450, 1256
Eco88I	CYCGRG	2 cut(s)	1542, 1776
EcoICRI	GAGCTC	2 cut(s)	223, 940
EcoRII	CCWGG	2 cut(s)	235, 766
EcoT14I	CCWWGG	2 cut(s)	198, 1120
EcoT22I	ATGCAT	2 cut(s)	717, 1468
EcoT38I	GRGCYC	2 cut(s)	225, 942
ErhI	CCWWGG	2 cut(s)	198, 1120
Esp3I	CGTCTC	2 cut(s)	449, 1479
FaeI	CATG	6 cut(s)	520, 796, 806, 1139, 1231, 1537
FalI	AAGNNNNNCTT	2 cut(s)	1673, 1705
FaqI	GGGAC	3 cut(s)	116, 1522, 1759
FatI	CATG	6 cut(s)	516, 792, 802, 1135, 1227, 1533
FauI	CCCGC	1 cut(s)	1735
FbaI	TGATCA	1 cut(s)	1314
FblI	GTMKAC	1 cut(s)	578
Fnu4HI	GCNGC	6 cut(s)	140, 330, 1067, 1392, 1448, 1530
FokI	GGATG	5 cut(s)	19, 134, 377, 715, 926
FriOI	GRGCYC	2 cut(s)	225, 942
Fsp4HI	GCNGC	6 cut(s)	140, 330, 1067, 1392, 1448, 1530
FspBI	CTAG	5 cut(s)	162, 492, 677, 1178, 1825
GlaI	GCGC	3 cut(s)	246, 328, 1528
GluI	GCNGC	6 cut(s)	140, 330, 1067, 1392, 1448, 1530
GsuI	CTGGAG	1 cut(s)	1610
HaeIII	GGCC	2 cut(s)	1119, 1737
HapII	CCGG	3 cut(s)	99, 689, 1777
HgaI	GACGC	1 cut(s)	466
HhaI	GCGC	3 cut(s)	247, 329, 1529
Hin1II	CATG	6 cut(s)	520, 796, 806, 1139, 1231, 1537
Hin6I	GCGC	3 cut(s)	245, 327, 1527
HinP1I	GCGC	3 cut(s)	245, 327, 1527
HincII	GTYRAC	1 cut(s)	1033
HindII	GTYRAC	1 cut(s)	1033
HindIII	AAGCTT	1 cut(s)	1160
HpaII	CCGG	3 cut(s)	99, 689, 1777
HphI	GGTGA	3 cut(s)	64, 584, 1066
Hpy166II	GTNNAC	2 cut(s)	579, 1033
Hpy8I	GTNNAC	2 cut(s)	579, 1033
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	6 cut(s)	79, 474, 730, 1109, 1294, 1710
HpyCH4III	ACNGT	5 cut(s)	304, 817, 963, 1039, 1426
HpyCH4IV	ACGT	2 cut(s)	449, 1255
HpyF10VI	GCNNNNNNNGC	4 cut(s)	521, 794, 923, 1187
HpyF3I	CTNAG	8 cut(s)	54, 398, 632, 893, 1205, 1480, 1616, 1785
HpySE526I	ACGT	2 cut(s)	449, 1255
Hsp92II	CATG	6 cut(s)	520, 796, 806, 1139, 1231, 1537
HspAI	GCGC	3 cut(s)	245, 327, 1527
Ksp22I	TGATCA	1 cut(s)	1314
Kzo9I	GATC	9 cut(s)	294, 595, 619, 636, 985, 1195, 1314, 1710, 1781
LmnI	GCTCC	4 cut(s)	220, 228, 1195, 1455
Lsp1109I	GCAGC	6 cut(s)	126, 316, 1078, 1378, 1459, 1541
LweI	GCATC	4 cut(s)	702, 713, 737, 904
MaeI	CTAG	5 cut(s)	162, 492, 677, 1178, 1825
MaeII	ACGT	2 cut(s)	449, 1255
MalI	GATC	9 cut(s)	296, 597, 621, 638, 987, 1197, 1316, 1712, 1783
MbiI	CCGCTC	1 cut(s)	42
MboI	GATC	9 cut(s)	294, 595, 619, 636, 985, 1195, 1314, 1710, 1781
MboII	GAAGA	9 cut(s)	365, 629, 1091, 1094, 1097, 1106, 1471, 1693, 1768
MfeI	CAATTG	1 cut(s)	783
MflI	RGATCY	2 cut(s)	619, 1781
MhlI	GDGCHC	2 cut(s)	225, 942
MlsI	TGGCCA	1 cut(s)	1737
MluNI	TGGCCA	1 cut(s)	1737
MlyI	GAGTC	7 cut(s)	137, 427, 584, 1118, 1141, 1163, 1401
MmeI	TCCRAC	4 cut(s)	71, 945, 1135, 1748
Mox20I	TGGCCA	1 cut(s)	1737
Mph1103I	ATGCAT	2 cut(s)	717, 1468
MroXI	GAANNNNTTC	1 cut(s)	1685
MscI	TGGCCA	1 cut(s)	1737
MseI	TTAA	5 cut(s)	560, 588, 839, 1562, 1731
MslI	CAYNNNNRTG	1 cut(s)	1226
Msp20I	TGGCCA	1 cut(s)	1737
MspA1I	CMGCKG	1 cut(s)	1069
MspCI	CTTAAG	1 cut(s)	587
MspI	CCGG	3 cut(s)	99, 689, 1777
MspR9I	CCNGG	5 cut(s)	100, 237, 768, 1777, 1778
MunI	CAATTG	1 cut(s)	783
Mva1269I	GAATGC	4 cut(s)	526, 894, 1334, 1468
MvaI	CCWGG	2 cut(s)	237, 768
MwoI	GCNNNNNNNGC	4 cut(s)	521, 794, 923, 1187
NciI	CCSGG	3 cut(s)	100, 1777, 1778
NdeII	GATC	9 cut(s)	294, 595, 619, 636, 985, 1195, 1314, 1710, 1781
NlaIII	CATG	6 cut(s)	520, 796, 806, 1139, 1231, 1537
NlaIV	GGNNCC	2 cut(s)	867, 1493
NsiI	ATGCAT	2 cut(s)	717, 1468
PaeR7I	CTCGAG	1 cut(s)	1542
PceI	AGGCCT	1 cut(s)	1119
PctI	GAATGC	4 cut(s)	526, 894, 1334, 1468
PdmI	GAANNNNTTC	1 cut(s)	1685
PfeI	GAWTC	5 cut(s)	175, 203, 628, 741, 763
PflMI	CCANNNNNTGG	1 cut(s)	788
PfoI	TCCNGGA	1 cut(s)	766
PkrI	GCNGC	6 cut(s)	141, 331, 1068, 1393, 1449, 1531
PleI	GAGTC	7 cut(s)	136, 426, 583, 1117, 1140, 1163, 1401
PmaCI	CACGTG	2 cut(s)	450, 1256
PmlI	CACGTG	2 cut(s)	450, 1256
PpsI	GAGTC	7 cut(s)	136, 426, 583, 1117, 1140, 1163, 1401
Ppu21I	YACGTR	2 cut(s)	450, 1256
Psp124BI	GAGCTC	2 cut(s)	225, 942
Psp6I	CCWGG	2 cut(s)	235, 766
PspCI	CACGTG	2 cut(s)	450, 1256
PspGI	CCWGG	2 cut(s)	235, 766
PspN4I	GGNNCC	2 cut(s)	867, 1493
PstI	CTGCAG	4 cut(s)	65, 334, 932, 1068
PsuI	RGATCY	2 cut(s)	619, 1781
RsaI	GTAC	2 cut(s)	338, 1439
RsaNI	GTAC	2 cut(s)	337, 1438
RseI	CAYNNNNRTG	1 cut(s)	1226
SacI	GAGCTC	2 cut(s)	225, 942
SaqAI	TTAA	5 cut(s)	560, 588, 839, 1562, 1731
SatI	GCNGC	6 cut(s)	140, 330, 1067, 1392, 1448, 1530
Sau3AI	GATC	9 cut(s)	294, 595, 619, 636, 985, 1195, 1314, 1710, 1781
SbfI	CCTGCAGG	1 cut(s)	932
ScaI	AGTACT	1 cut(s)	338
SchI	GAGTC	7 cut(s)	137, 427, 584, 1118, 1141, 1163, 1401
ScrFI	CCNGG	5 cut(s)	100, 237, 768, 1777, 1778
SdaI	CCTGCAGG	1 cut(s)	932
SduI	GDGCHC	2 cut(s)	225, 942
SfaNI	GCATC	4 cut(s)	702, 713, 737, 904
SfcI	CTRYAG	7 cut(s)	61, 330, 358, 468, 579, 928, 1064
Sfr274I	CTCGAG	1 cut(s)	1542
SlaI	CTCGAG	1 cut(s)	1542
SmaI	CCCGGG	1 cut(s)	1778
SmiMI	CAYNNNNRTG	1 cut(s)	1226
SmlI	CTYRAG	6 cut(s)	587, 602, 723, 935, 1371, 1542
SmoI	CTYRAG	6 cut(s)	587, 602, 723, 935, 1371, 1542
Sse8387I	CCTGCAGG	1 cut(s)	932
SseBI	AGGCCT	1 cut(s)	1119
SsiI	CCGC	7 cut(s)	40, 473, 570, 1069, 1283, 1453, 1742
SspMI	CTAG	5 cut(s)	162, 492, 677, 1178, 1825
SstI	GAGCTC	2 cut(s)	225, 942
StuI	AGGCCT	1 cut(s)	1119
StyD4I	CCNGG	5 cut(s)	98, 235, 766, 1775, 1776
StyI	CCWWGG	2 cut(s)	198, 1120
TaaI	ACNGT	5 cut(s)	304, 817, 963, 1039, 1426
TaiI	ACGT	2 cut(s)	452, 1258
TatI	WGTACW	2 cut(s)	336, 1437
TfiI	GAWTC	5 cut(s)	175, 203, 628, 741, 763
Tru1I	TTAA	5 cut(s)	560, 588, 839, 1562, 1731
Tru9I	TTAA	5 cut(s)	560, 588, 839, 1562, 1731
TscAI	CASTG	4 cut(s)	159, 1324, 1431, 1519
TseI	GCWGC	6 cut(s)	139, 329, 1066, 1391, 1447, 1529
TspGWI	ACGGA	1 cut(s)	401
TspMI	CCCGGG	1 cut(s)	1776
TspRI	CASTG	4 cut(s)	159, 1324, 1431, 1519
Van91I	CCANNNNNTGG	1 cut(s)	788
Vha464I	CTTAAG	1 cut(s)	587
XapI	RAATTY	5 cut(s)	269, 486, 756, 1057, 1217
XbaI	TCTAGA	1 cut(s)	161
XhoI	CTCGAG	1 cut(s)	1542
XmaI	CCCGGG	1 cut(s)	1776
XmiI	GTMKAC	1 cut(s)	578
XmnI	GAANNNNTTC	1 cut(s)	1685
XspI	CTAG	5 cut(s)	162, 492, 677, 1178, 1825
ZrmI	AGTACT	1 cut(s)	338
Zsp2I	ATGCAT	2 cut(s)	717, 1468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.