Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0006676

Physical Location & Seq

Genomic Coordinates Reverse (-)

20246110 .. 20248857

Gene Structure 2748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g17930.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGGGGATGGTTTCTGACAGCCCTTTTTCTTTTTCAAACCGCTCTCCAACTCCTAAGCTCTGCAGCTCCTTCACCACTCGTATCTTTTCAGATGTTGCCGGGGACATTACAATCGTTGTCGATGGAGAGTCTTTCTTGCTGCATAAGTTTCCACTGGTGTCGCGAAGTGGAAAGATTCGGAAAATGGTGGCAGATAACAAGGATTCATCTTCAAAGTTGGAGCTCCTCAACATACCAGGAGGGGTGCAGGCGTTTGAACTCGCAATGAAATTCTGTTATGGCATGAACTTTGAGATCACAACTGCAAATGTCGCCCATCTGCGGTGTGCTGCAGAGTACTTGGAAATGACTGAAGACTACAGGGATGAAAACCTGATTGCGCGAACGGAAACTTACCTGAACGAGGTTGTAGTTGAGAGTCTTGAGAAGTCAGTAGAAGTCCTTGCCACCTGTGAGACGCTACCTTCTATAGCGGAGGAGGTTGGAATTCCTAGTAGATGTGTGGAAGCTATTGCCATGAATGCTTGCAAGGAACAATTAGCATCAGGGTTGTCAATGTTAAGCTGTGACGGCGAATCTACAGAGCTTAAGAGTGGTCGTCATGAGTGGTGGGTTGAAGATCTGTCGATTCTAAGGATTGATTATTATCAAAGGGTTATATGTGCTATGACAAGACTAGGTGTGCGACCGGATAGCATTTCCACATCTTTGATGCATTTTGCTCAAACATCCTTGAAGGGTATTGGAAAATGTCAAATTTGGAATCCAGGTAAAGTGAAGCCAAATGCTGGCAAGACAGAACATGACCAGAAGACTGTTGTCGAAACCCTAGTAAGCTTAATGCCAACGGAGAAAAGCTCTTCAGTGCCACTGAGTTTTATGTTTGGAATGCTGAGAATGGCAATCATGGTGGATGCAACAATAGCCAGCAGGCTTGAGCTCGAGAGGAGGATTGCCTTTCGGTTGGAAATGGTTTCGCTTGATGATCTCCTTATACCCGGATCGATCCATGCAGGGGGTTCTTTGTATGATGTTGACACCGTTCATCGAATACTGGTGAATTTTTTGCAGCGGATTGAAGAAGAAGACGAAGAAAGTGAAGATTGTGGATATGAGTCTGAAGGACTTGGTTCTCCAAGTCATGGTTCATTGTTGAAAGTTGGAAAGCTTATTGACTCATATCTAGCTGAAAATAAACTTGCTCCTGATCCTTACCTGAGCTTACCAACATTCATTGCTATGATTGAAATACTGCCCGATTATGCACGTGTGATTGATGACGGGATTTACCGGGCGGTTGATATATACTTGAAAGTTCATTCGATGCTGACTGAACAAGAATGCAAGAAGCTGTGCAAATTAATAGACTGCCAAAAGCTCTCTCAAGAAGCCAGCAATCATGCCGCACAAAATGATAGGCTCCCAGTCAAGATGACAGTGCAGGTTCTGTACTTCGAGCAGCTCCGCTTGAAGAATGCATTGTCTGGAAGCTCAGGAGATGGGTTCCCCTCGCAGAGAATAAGCAGTGGTGTCCCAAGCGCAGCCATGTCTCCTCGAGACAACTACGCTTCGTTAAGGAGAGAAAACCGAGAACTGAAGCTGGAGATTTCGAGAATGAGAGTGAGACTGAGTGAGTTGGAGAAAGAGCAGTTGTTTATGAAACAAGGAATGATGGATAAAACAGGAAATGGGAAAACTTTCTTGACCTCACTCTCCAAAGGGATTGGAAGGATTGGGATTTTTAGTGGCCAAGCGGGAGGCAAACCGAAGAAATCAGGTCGGAAGTCCCGGGGATCTGAGGGGAAAACTGGTCGGAGTAGGAGATATTCCGCTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

613

Amino Acids

67.89

Weight (kDa)

6.29

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08570 AT3G08660 AT3G08660 AT3G08660
fragaria_vesca	FvH4_6g09490 FvH4_6g09490 FvH4_6g09490 FvH4_6g09490
malus_domestica	MD04G1177100.v1.1 MD12G1192300.v1.1
prunus_persica	Prupe.6G296800_v2.0.a1 Prupe.6G296800_v2.0.a1
pyrus_communis	pycom04g15640 pycom12g17930
rosa_chinensis	RchiOBHm_Chr3g0460071
rosa_laevigata	RLG00000025046
rosa_multiflora	Rmu_sc0000449.1_g000056 Rmu_sc0007694.1_g000002
rosa_roxburghii	Rroxscaffold_6G00419870
rosa_rugosa	Rorug03G0039200 Rorug03G0039300
rosa_samantha	Rh3AG097700 Rh3BG100800 Rh3CG102900 Rh3DG102100
rosa_wichuraiana	Rw3G008240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1432
AccB7I	CCANNNNNTGG	2 cut(s)	788, 1142
AccBSI	CCGCTC	1 cut(s)	42
AccII	CGCG	2 cut(s)	163, 382
AciI	CCGC	9 cut(s)	40, 322, 473, 1072, 1295, 1404, 1465, 1754, 1830
AclWI	GGATC	4 cut(s)	1000, 1009, 1202, 1801
AcoI	YGGCCR	1 cut(s)	1747
AcsI	RAATTY	4 cut(s)	269, 486, 756, 1060
AcuI	CTGAAG	4 cut(s)	372, 846, 1140, 1616
AcvI	CACGTG	1 cut(s)	1268
AfaI	GTAC	2 cut(s)	338, 1451
AfiI	CCNNNNNNNGG	5 cut(s)	321, 403, 788, 1015, 1142
AflII	CTTAAG	1 cut(s)	587
AflIII	ACRYGT	1 cut(s)	1267
AjnI	CCWGG	2 cut(s)	235, 766
AjuI	GAANNNNNNNTTGG	2 cut(s)	1129, 1161
Alw21I	GWGCWC	2 cut(s)	225, 942
Alw26I	GTCTC	4 cut(s)	449, 1551, 1554, 1618
AlwI	GGATC	4 cut(s)	1000, 1009, 1202, 1801
AlwNI	CAGNNNCTG	1 cut(s)	1447
Ama87I	CYCGRG	3 cut(s)	941, 1554, 1788
AoxI	GGCC	1 cut(s)	1747
ApeKI	GCWGC	6 cut(s)	63, 139, 329, 1069, 1459, 1541
ApoI	RAATTY	4 cut(s)	269, 486, 756, 1060
AseI	ATTAAT	1 cut(s)	1361
Asp700I	GAANNNNTTC	1 cut(s)	1697
AspLEI	GCGC	2 cut(s)	382, 1541
AsuC2I	CCSGG	5 cut(s)	100, 999, 1292, 1789, 1790
AsuHPI	GGTGA	2 cut(s)	64, 1069
AvaI	CYCGRG	3 cut(s)	941, 1554, 1788
BalI	TGGCCA	1 cut(s)	1749
BanII	GRGCYC	2 cut(s)	225, 942
BbrPI	CACGTG	1 cut(s)	1268
BbsI	GAAGAC	3 cut(s)	360, 818, 1092
Bbv12I	GWGCWC	2 cut(s)	225, 942
BbvI	GCAGC	6 cut(s)	75, 126, 316, 1081, 1471, 1553
BccI	CCATC	4 cut(s)	116, 324, 1493, 1666
BceAI	ACGGC	1 cut(s)	586
BciT130I	CCWGG	2 cut(s)	237, 768
BcnI	CCSGG	5 cut(s)	100, 999, 1292, 1789, 1790
BcoDI	GTCTC	4 cut(s)	449, 1551, 1554, 1618
BfaI	CTAG	5 cut(s)	492, 677, 830, 1184, 1837
BfmI	CTRYAG	5 cut(s)	61, 330, 358, 468, 579
BfrI	CTTAAG	1 cut(s)	587
BfuAI	ACCTGC	1 cut(s)	1432
BglII	AGATCT	1 cut(s)	619
BisI	GCNGC	7 cut(s)	64, 140, 330, 1070, 1404, 1460, 1542
BlsI	GCNGC	7 cut(s)	65, 141, 331, 1071, 1405, 1461, 1543
BmcAI	AGTACT	1 cut(s)	338
Bme1390I	CCNGG	7 cut(s)	100, 237, 768, 999, 1292, 1789, 1790
BmeT110I	CYCGRG	3 cut(s)	941, 1554, 1788
BmiI	GGNNCC	2 cut(s)	1421, 1505
BmrFI	CCNGG	7 cut(s)	100, 237, 768, 999, 1292, 1789, 1790
BmrI	ACTGGG	1 cut(s)	1418
BmsI	GCATC	4 cut(s)	551, 702, 904, 1314
BmuI	ACTGGG	1 cut(s)	1418
BoxI	GACNNNNGTC	1 cut(s)	818
BpiI	GAAGAC	3 cut(s)	360, 818, 1092
BplI	GAGNNNNNCTC	2 cut(s)	842, 874
BpmI	CTGGAG	1 cut(s)	1622
Bpu10I	CCTNAGC	3 cut(s)	54, 1217, 1492
BpuEI	CTTGAG	3 cut(s)	443, 956, 1368
BpuMI	CCSGG	5 cut(s)	100, 999, 1292, 1789, 1790
Bsa29I	ATCGAT	1 cut(s)	1004
BsaAI	YACGTR	1 cut(s)	1268
BsaBI	GATNNNNATC	1 cut(s)	645
BsaJI	CCNNGG	3 cut(s)	99, 1788, 1789
BsaWI	WCCGGW	1 cut(s)	688
Bsc4I	CCNNNNNNNGG	5 cut(s)	321, 403, 788, 1015, 1142
Bse1I	ACTGG	4 cut(s)	159, 1059, 1424, 1813
Bse3DI	GCAATG	2 cut(s)	270, 1233
Bse8I	GATNNNNATC	1 cut(s)	645
BseBI	CCWGG	2 cut(s)	237, 768
BseCI	ATCGAT	1 cut(s)	1004
BseDI	CCNNGG	3 cut(s)	99, 1788, 1789
BseGI	GGATG	4 cut(s)	12, 370, 728, 919
BseJI	GATNNNNATC	1 cut(s)	645
BseLI	CCNNNNNNNGG	5 cut(s)	321, 403, 788, 1015, 1142
BseMI	GCAATG	2 cut(s)	270, 1233
BseMII	CTCAG	6 cut(s)	863, 884, 1208, 1506, 1619, 1788
BseNI	ACTGG	4 cut(s)	159, 1059, 1424, 1813
BseRI	GAGGAG	4 cut(s)	215, 491, 961, 1542
BseXI	GCAGC	6 cut(s)	75, 126, 316, 1081, 1471, 1553
BsgI	GTGCAG	2 cut(s)	266, 1460
Bsh1236I	CGCG	2 cut(s)	163, 382
Bsh1285I	CGRYCG	1 cut(s)	689
BshFI	GGCC	1 cut(s)	1749
BshVI	ATCGAT	1 cut(s)	1004
BsiEI	CGRYCG	1 cut(s)	689
BsiHKAI	GWGCWC	2 cut(s)	225, 942
BsiHKCI	CYCGRG	3 cut(s)	941, 1554, 1788
BsiSI	CCGG	5 cut(s)	99, 689, 999, 1291, 1789
BslFI	GGGAC	3 cut(s)	116, 1517, 1771
BslI	CCNNNNNNNGG	5 cut(s)	321, 403, 788, 1015, 1142
BsmAI	GTCTC	4 cut(s)	449, 1551, 1554, 1618
BsmBI	CGTCTC	1 cut(s)	449
BsmFI	GGGAC	3 cut(s)	116, 1517, 1771
BsmI	GAATGC	4 cut(s)	526, 894, 1346, 1480
BsnI	GGCC	1 cut(s)	1749
BsoBI	CYCGRG	3 cut(s)	941, 1554, 1788
Bsp1286I	GDGCHC	2 cut(s)	225, 942
Bsp143I	GATC	7 cut(s)	294, 619, 985, 1001, 1005, 1207, 1793
Bsp68I	TCGCGA	1 cut(s)	163
BspACI	CCGC	9 cut(s)	40, 322, 473, 1072, 1295, 1404, 1465, 1754, 1830
BspANI	GGCC	1 cut(s)	1749
BspCNI	CTCAG	6 cut(s)	864, 885, 1209, 1505, 1620, 1789
BspDI	ATCGAT	1 cut(s)	1004
BspFNI	CGCG	2 cut(s)	163, 382
BspHI	TCATGA	1 cut(s)	601
BspLI	GGNNCC	2 cut(s)	1421, 1505
BspMAI	CTGCAG	2 cut(s)	65, 334
BspMI	ACCTGC	1 cut(s)	1432
BspPI	GGATC	4 cut(s)	1000, 1009, 1202, 1801
BspQI	GCTCTTC	1 cut(s)	865
BspTI	CTTAAG	1 cut(s)	587
BsrBI	CCGCTC	1 cut(s)	42
BsrDI	GCAATG	2 cut(s)	270, 1233
BsrI	ACTGG	4 cut(s)	159, 1059, 1424, 1813
BssECI	CCNNGG	3 cut(s)	99, 1788, 1789
BssMI	GATC	7 cut(s)	294, 619, 985, 1001, 1005, 1207, 1793
Bst2UI	CCWGG	2 cut(s)	237, 768
Bst4CI	ACNGT	3 cut(s)	817, 1042, 1438
Bst6I	CTCTTC	1 cut(s)	865
BstAFI	CTTAAG	1 cut(s)	587
BstBAI	YACGTR	1 cut(s)	1268
BstC8I	GCNNGC	6 cut(s)	249, 526, 790, 928, 932, 1393
BstDEI	CTNAG	8 cut(s)	54, 632, 872, 893, 1217, 1492, 1628, 1797
BstENI	CCTNNNNNAGG	1 cut(s)	401
BstF5I	GGATG	4 cut(s)	12, 370, 728, 919
BstFNI	CGCG	2 cut(s)	163, 382
BstHHI	GCGC	2 cut(s)	382, 1541
BstKTI	GATC	7 cut(s)	297, 622, 988, 1004, 1008, 1210, 1796
BstMAI	GTCTC	4 cut(s)	449, 1551, 1554, 1618
BstMBI	GATC	7 cut(s)	294, 619, 985, 1001, 1005, 1207, 1793
BstMCI	CGRYCG	1 cut(s)	689
BstMWI	GCNNNNNNNGC	4 cut(s)	311, 521, 570, 923
BstNI	CCWGG	2 cut(s)	237, 768
BstPAI	GACNNNNGTC	1 cut(s)	818
BstSCI	CCNGG	7 cut(s)	98, 235, 766, 997, 1290, 1787, 1788
BstSFI	CTRYAG	5 cut(s)	61, 330, 358, 468, 579
BstUI	CGCG	2 cut(s)	163, 382
BstV1I	GCAGC	6 cut(s)	75, 126, 316, 1081, 1471, 1553
BstV2I	GAAGAC	3 cut(s)	360, 818, 1092
BstX2I	RGATCY	2 cut(s)	619, 1793
BstYI	RGATCY	2 cut(s)	619, 1793
Bsu15I	ATCGAT	1 cut(s)	1004
BsuRI	GGCC	1 cut(s)	1749
BsuTUI	ATCGAT	1 cut(s)	1004
BtsCI	GGATG	4 cut(s)	12, 370, 728, 919
BtsI	GCAGTG	1 cut(s)	1531
BtsIMutI	CAGTG	5 cut(s)	152, 869, 870, 1443, 1531
BtuMI	TCGCGA	1 cut(s)	163
BveI	ACCTGC	1 cut(s)	1432
Cac8I	GCNNGC	6 cut(s)	249, 526, 790, 928, 932, 1393
CaiI	CAGNNNCTG	1 cut(s)	1447
CciI	TCATGA	1 cut(s)	601
CfoI	GCGC	2 cut(s)	382, 1541
Cfr9I	CCCGGG	1 cut(s)	1788
ClaI	ATCGAT	1 cut(s)	1004
CseI	GACGC	1 cut(s)	466
Csp6I	GTAC	2 cut(s)	337, 1450
CspCI	CAANNNNNGTGG	2 cut(s)	891, 926
CviAII	CATG	9 cut(s)	283, 517, 602, 803, 907, 1010, 1142, 1400, 1546
CviQI	GTAC	2 cut(s)	337, 1450
DdeI	CTNAG	8 cut(s)	54, 632, 872, 893, 1217, 1492, 1628, 1797
DpnI	GATC	7 cut(s)	296, 621, 987, 1003, 1007, 1209, 1795
DpnII	GATC	7 cut(s)	294, 619, 985, 1001, 1005, 1207, 1793
EaeI	YGGCCR	1 cut(s)	1747
Eam1104I	CTCTTC	1 cut(s)	865
EarI	CTCTTC	1 cut(s)	865
Ecl136II	GAGCTC	2 cut(s)	223, 940
Eco24I	GRGCYC	2 cut(s)	225, 942
Eco53kI	GAGCTC	2 cut(s)	223, 940
Eco57I	CTGAAG	4 cut(s)	372, 846, 1140, 1616
Eco72I	CACGTG	1 cut(s)	1268
Eco88I	CYCGRG	3 cut(s)	941, 1554, 1788
EcoICRI	GAGCTC	2 cut(s)	223, 940
EcoNI	CCTNNNNNAGG	1 cut(s)	401
EcoRI	GAATTC	1 cut(s)	486
EcoRII	CCWGG	2 cut(s)	235, 766
EcoT22I	ATGCAT	2 cut(s)	717, 1480
EcoT38I	GRGCYC	2 cut(s)	225, 942
Esp3I	CGTCTC	1 cut(s)	449
FaeI	CATG	9 cut(s)	286, 520, 605, 806, 910, 1013, 1145, 1403, 1549
FaqI	GGGAC	3 cut(s)	116, 1517, 1771
FatI	CATG	9 cut(s)	282, 516, 601, 802, 906, 1009, 1141, 1399, 1545
FauI	CCCGC	1 cut(s)	1747
Fnu4HI	GCNGC	7 cut(s)	64, 140, 330, 1070, 1404, 1460, 1542
FokI	GGATG	4 cut(s)	19, 377, 715, 926
FriOI	GRGCYC	2 cut(s)	225, 942
Fsp4HI	GCNGC	7 cut(s)	64, 140, 330, 1070, 1404, 1460, 1542
FspBI	CTAG	5 cut(s)	492, 677, 830, 1184, 1837
GlaI	GCGC	2 cut(s)	381, 1540
GluI	GCNGC	7 cut(s)	64, 140, 330, 1070, 1404, 1460, 1542
GsuI	CTGGAG	1 cut(s)	1622
HaeIII	GGCC	1 cut(s)	1749
HapII	CCGG	5 cut(s)	99, 689, 999, 1291, 1789
HgaI	GACGC	1 cut(s)	466
HhaI	GCGC	2 cut(s)	382, 1541
Hin1II	CATG	9 cut(s)	286, 520, 605, 806, 910, 1013, 1145, 1403, 1549
Hin6I	GCGC	2 cut(s)	380, 1539
HinP1I	GCGC	2 cut(s)	380, 1539
HincII	GTYRAC	1 cut(s)	1036
HindII	GTYRAC	1 cut(s)	1036
HindIII	AAGCTT	2 cut(s)	835, 1166
HinfI	GANTC	9 cut(s)	128, 175, 203, 418, 575, 628, 763, 1115, 1175
HpaII	CCGG	5 cut(s)	99, 689, 999, 1291, 1789
HphI	GGTGA	2 cut(s)	64, 1069
Hpy166II	GTNNAC	1 cut(s)	1036
Hpy188I	TCNGA	7 cut(s)	16, 91, 180, 1120, 1782, 1798, 1815
Hpy8I	GTNNAC	1 cut(s)	1036
HpyAV	CCTTC	5 cut(s)	79, 474, 730, 1115, 1722
HpyCH4III	ACNGT	3 cut(s)	817, 1042, 1438
HpyCH4IV	ACGT	1 cut(s)	1267
HpyF10VI	GCNNNNNNNGC	4 cut(s)	311, 521, 570, 923
HpyF3I	CTNAG	8 cut(s)	54, 632, 872, 893, 1217, 1492, 1628, 1797
HpySE526I	ACGT	1 cut(s)	1267
Hsp92II	CATG	9 cut(s)	286, 520, 605, 806, 910, 1013, 1145, 1403, 1549
HspAI	GCGC	2 cut(s)	380, 1539
Kzo9I	GATC	7 cut(s)	294, 619, 985, 1001, 1005, 1207, 1793
LguI	GCTCTTC	1 cut(s)	865
LmnI	GCTCC	6 cut(s)	71, 220, 228, 1207, 1425, 1467
Lsp1109I	GCAGC	6 cut(s)	75, 126, 316, 1081, 1471, 1553
LweI	GCATC	4 cut(s)	551, 702, 904, 1314
MaeI	CTAG	5 cut(s)	492, 677, 830, 1184, 1837
MaeII	ACGT	1 cut(s)	1267
MaeIII	GTNAC	1 cut(s)	566
MalI	GATC	7 cut(s)	296, 621, 987, 1003, 1007, 1209, 1795
MbiI	CCGCTC	1 cut(s)	42
MboI	GATC	7 cut(s)	294, 619, 985, 1001, 1005, 1207, 1793
MflI	RGATCY	2 cut(s)	619, 1793
MhlI	GDGCHC	2 cut(s)	225, 942
MlsI	TGGCCA	1 cut(s)	1749
MluCI	AATT	6 cut(s)	269, 486, 536, 756, 1060, 1358
MluNI	TGGCCA	1 cut(s)	1749
MlyI	GAGTC	4 cut(s)	137, 427, 1124, 1169
MmeI	TCCRAC	8 cut(s)	71, 198, 463, 945, 1141, 1617, 1760, 1793
Mox20I	TGGCCA	1 cut(s)	1749
Mph1103I	ATGCAT	2 cut(s)	717, 1480
MroXI	GAANNNNTTC	1 cut(s)	1697
MscI	TGGCCA	1 cut(s)	1749
MseI	TTAA	5 cut(s)	560, 588, 839, 1361, 1574
MslI	CAYNNNNRTG	1 cut(s)	1238
Msp20I	TGGCCA	1 cut(s)	1749
MspA1I	CMGCKG	1 cut(s)	1072
MspCI	CTTAAG	1 cut(s)	587
MspI	CCGG	5 cut(s)	99, 689, 999, 1291, 1789
MspR9I	CCNGG	7 cut(s)	100, 237, 768, 999, 1292, 1789, 1790
Mva1269I	GAATGC	4 cut(s)	526, 894, 1346, 1480
MvaI	CCWGG	2 cut(s)	237, 768
MvnI	CGCG	2 cut(s)	163, 382
MwoI	GCNNNNNNNGC	4 cut(s)	311, 521, 570, 923
NciI	CCSGG	5 cut(s)	100, 999, 1292, 1789, 1790
NdeII	GATC	7 cut(s)	294, 619, 985, 1001, 1005, 1207, 1793
NlaIII	CATG	9 cut(s)	286, 520, 605, 806, 910, 1013, 1145, 1403, 1549
NlaIV	GGNNCC	2 cut(s)	1421, 1505
NmuCI	GTSAC	1 cut(s)	566
NruI	TCGCGA	1 cut(s)	163
NsiI	ATGCAT	2 cut(s)	717, 1480
PaeR7I	CTCGAG	2 cut(s)	941, 1554
PagI	TCATGA	1 cut(s)	601
PciSI	GCTCTTC	1 cut(s)	865
PctI	GAATGC	4 cut(s)	526, 894, 1346, 1480
PdmI	GAANNNNTTC	1 cut(s)	1697
PfeI	GAWTC	5 cut(s)	175, 203, 575, 628, 763
PflMI	CCANNNNNTGG	2 cut(s)	788, 1142
PkrI	GCNGC	7 cut(s)	65, 141, 331, 1071, 1405, 1461, 1543
PleI	GAGTC	4 cut(s)	136, 426, 1123, 1169
PmaCI	CACGTG	1 cut(s)	1268
PmlI	CACGTG	1 cut(s)	1268
PpsI	GAGTC	4 cut(s)	136, 426, 1123, 1169
Ppu21I	YACGTR	1 cut(s)	1268
PshAI	GACNNNNGTC	1 cut(s)	818
PshBI	ATTAAT	1 cut(s)	1361
Psp124BI	GAGCTC	2 cut(s)	225, 942
Psp6I	CCWGG	2 cut(s)	235, 766
PspCI	CACGTG	1 cut(s)	1268
PspGI	CCWGG	2 cut(s)	235, 766
PspN4I	GGNNCC	2 cut(s)	1421, 1505
PstI	CTGCAG	2 cut(s)	65, 334
PstNI	CAGNNNCTG	1 cut(s)	1447
PsuI	RGATCY	2 cut(s)	619, 1793
RruI	TCGCGA	1 cut(s)	163
RsaI	GTAC	2 cut(s)	338, 1451
RsaNI	GTAC	2 cut(s)	337, 1450
RseI	CAYNNNNRTG	1 cut(s)	1238
SacI	GAGCTC	2 cut(s)	225, 942
SapI	GCTCTTC	1 cut(s)	865
SaqAI	TTAA	5 cut(s)	560, 588, 839, 1361, 1574
SatI	GCNGC	7 cut(s)	64, 140, 330, 1070, 1404, 1460, 1542
Sau3AI	GATC	7 cut(s)	294, 619, 985, 1001, 1005, 1207, 1793
ScaI	AGTACT	1 cut(s)	338
SchI	GAGTC	4 cut(s)	137, 427, 1124, 1169
ScrFI	CCNGG	7 cut(s)	100, 237, 768, 999, 1292, 1789, 1790
SduI	GDGCHC	2 cut(s)	225, 942
SfaNI	GCATC	4 cut(s)	551, 702, 904, 1314
SfcI	CTRYAG	5 cut(s)	61, 330, 358, 468, 579
Sfr274I	CTCGAG	2 cut(s)	941, 1554
SlaI	CTCGAG	2 cut(s)	941, 1554
SmaI	CCCGGG	1 cut(s)	1790
SmiMI	CAYNNNNRTG	1 cut(s)	1238
SmlI	CTYRAG	6 cut(s)	422, 587, 935, 941, 1383, 1554
SmoI	CTYRAG	6 cut(s)	422, 587, 935, 941, 1383, 1554
Sse9I	AATT	6 cut(s)	269, 486, 536, 756, 1060, 1358
SsiI	CCGC	9 cut(s)	40, 322, 473, 1072, 1295, 1404, 1465, 1754, 1830
SspMI	CTAG	5 cut(s)	492, 677, 830, 1184, 1837
SstI	GAGCTC	2 cut(s)	225, 942
StyD4I	CCNGG	7 cut(s)	98, 235, 766, 997, 1290, 1787, 1788
TaaI	ACNGT	3 cut(s)	817, 1042, 1438
TaiI	ACGT	1 cut(s)	1270
TasI	AATT	6 cut(s)	269, 486, 536, 756, 1060, 1358
TatI	WGTACW	2 cut(s)	336, 1449
TauI	GCSGC	1 cut(s)	1406
TfiI	GAWTC	5 cut(s)	175, 203, 575, 628, 763
Tru1I	TTAA	5 cut(s)	560, 588, 839, 1361, 1574
Tru9I	TTAA	5 cut(s)	560, 588, 839, 1361, 1574
TscAI	CASTG	5 cut(s)	159, 870, 876, 1443, 1531
TseFI	GTSAC	1 cut(s)	566
TseI	GCWGC	6 cut(s)	63, 139, 329, 1069, 1459, 1541
Tsp45I	GTSAC	1 cut(s)	566
TspGWI	ACGGA	2 cut(s)	401, 863
TspMI	CCCGGG	1 cut(s)	1788
TspRI	CASTG	5 cut(s)	159, 870, 876, 1443, 1531
Van91I	CCANNNNNTGG	2 cut(s)	788, 1142
Vha464I	CTTAAG	1 cut(s)	587
VspI	ATTAAT	1 cut(s)	1361
XagI	CCTNNNNNAGG	1 cut(s)	401
XapI	RAATTY	4 cut(s)	269, 486, 756, 1060
XhoI	CTCGAG	2 cut(s)	941, 1554
XmaI	CCCGGG	1 cut(s)	1788
XmnI	GAANNNNTTC	1 cut(s)	1697
XspI	CTAG	5 cut(s)	492, 677, 830, 1184, 1837
ZrmI	AGTACT	1 cut(s)	338
Zsp2I	ATGCAT	2 cut(s)	717, 1480

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.