Belongs to the NPH3 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08570 AT3G08660 AT3G08660 AT3G08660 |
| fragaria_vesca | FvH4_6g09490 FvH4_6g09490 FvH4_6g09490 FvH4_6g09490 |
| malus_domestica | MD04G1177100.v1.1 MD12G1192300.v1.1 |
| prunus_persica | Prupe.6G296800_v2.0.a1 Prupe.6G296800_v2.0.a1 |
| pyrus_communis | pycom04g15640 pycom12g17930 |
| rosa_chinensis | RchiOBHm_Chr3g0460071 |
| rosa_laevigata | RLG00000025046 |
| rosa_multiflora | Rmu_sc0000449.1_g000056 Rmu_sc0007694.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00419870 |
| rosa_rugosa | Rorug03G0039200 Rorug03G0039300 |
| rosa_samantha | Rh3AG097700 Rh3BG100800 Rh3CG102900 Rh3DG102100 |
| rosa_wichuraiana | Rw3G008240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 869 |
| AarI | CACCTGC | 1 cut(s) | 509 |
| Acc36I | ACCTGC | 1 cut(s) | 509 |
| AccB1I | GGYRCC | 1 cut(s) | 901 |
| AccI | GTMKAC | 1 cut(s) | 14 |
| AciI | CCGC | 3 cut(s) | 354, 1105, 1319 |
| AclWI | GGATC | 1 cut(s) | 695 |
| AcsI | RAATTY | 2 cut(s) | 320, 807 |
| AcuI | CTGAAG | 1 cut(s) | 423 |
| AfaI | GTAC | 1 cut(s) | 1275 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 52, 454, 1172 |
| AflII | CTTAAG | 1 cut(s) | 638 |
| AgsI | TTSAA | 8 cut(s) | 258, 467, 668, 980, 1112, 1186, 1271, 1336 |
| AjnI | CCWGG | 1 cut(s) | 286 |
| AleI | CACNNNNGTG | 1 cut(s) | 93 |
| AluBI | AGCT | 7 cut(s) | 274, 310, 637, 828, 894, 1217, 1245 |
| AluI | AGCT | 7 cut(s) | 274, 310, 637, 828, 894, 1217, 1245 |
| Alw21I | GWGCWC | 2 cut(s) | 90, 276 |
| Alw26I | GTCTC | 3 cut(s) | 113, 216, 656 |
| AlwI | GGATC | 1 cut(s) | 695 |
| Ama87I | CYCGRG | 4 cut(s) | 83, 653, 971, 1290 |
| AoxI | GGCC | 2 cut(s) | 55, 293 |
| ApeKI | GCWGC | 3 cut(s) | 375, 380, 953 |
| ApoI | RAATTY | 2 cut(s) | 320, 807 |
| AspLEI | GCGC | 1 cut(s) | 380 |
| AspS9I | GGNCC | 2 cut(s) | 55, 293 |
| AsuHPI | GGTGA | 3 cut(s) | 487, 635, 1102 |
| AsuNHI | GCTAGC | 1 cut(s) | 310 |
| AvaI | CYCGRG | 4 cut(s) | 83, 653, 971, 1290 |
| BanI | GGYRCC | 1 cut(s) | 901 |
| BanII | GRGCYC | 1 cut(s) | 276 |
| BbsI | GAAGAC | 2 cut(s) | 411, 1134 |
| Bbv12I | GWGCWC | 2 cut(s) | 90, 276 |
| BbvCI | CCTCAGC | 1 cut(s) | 929 |
| BbvI | GCAGC | 3 cut(s) | 362, 367, 940 |
| BccI | CCATC | 5 cut(s) | 167, 375, 614, 1000, 1298 |
| BceAI | ACGGC | 1 cut(s) | 1211 |
| BciT130I | CCWGG | 1 cut(s) | 288 |
| BcoDI | GTCTC | 3 cut(s) | 113, 216, 656 |
| BfaI | CTAG | 4 cut(s) | 69, 311, 1016, 1214 |
| BfmI | CTRYAG | 3 cut(s) | 409, 964, 1100 |
| BfrI | CTTAAG | 1 cut(s) | 638 |
| BfuAI | ACCTGC | 1 cut(s) | 509 |
| BglII | AGATCT | 1 cut(s) | 670 |
| BisI | GCNGC | 3 cut(s) | 376, 381, 954 |
| BlsI | GCNGC | 3 cut(s) | 377, 382, 955 |
| BmcAI | AGTACT | 1 cut(s) | 1275 |
| Bme1390I | CCNGG | 1 cut(s) | 288 |
| BmeT110I | CYCGRG | 4 cut(s) | 83, 653, 971, 1290 |
| BmgT120I | GGNCC | 2 cut(s) | 55, 293 |
| BmiI | GGNNCC | 2 cut(s) | 56, 903 |
| BmrFI | CCNGG | 1 cut(s) | 288 |
| BmsI | GCATC | 3 cut(s) | 235, 764, 940 |
| BmtI | GCTAGC | 1 cut(s) | 314 |
| BpiI | GAAGAC | 2 cut(s) | 411, 1134 |
| BpmI | CTGGAG | 1 cut(s) | 309 |
| Bpu10I | CCTNAGC | 4 cut(s) | 633, 683, 929, 1241 |
| BpuEI | CTTGAG | 1 cut(s) | 494 |
| Bsa29I | ATCGAT | 1 cut(s) | 1299 |
| BsaBI | GATNNNNATC | 1 cut(s) | 938 |
| BsaJI | CCNNGG | 3 cut(s) | 249, 525, 1171 |
| BsaWI | WCCGGW | 1 cut(s) | 90 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 499, 529 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 52, 454, 1172 |
| Bse1I | ACTGG | 1 cut(s) | 1092 |
| Bse3DI | GCAATG | 4 cut(s) | 80, 321, 677, 1152 |
| Bse8I | GATNNNNATC | 1 cut(s) | 938 |
| BseBI | CCWGG | 1 cut(s) | 288 |
| BseCI | ATCGAT | 1 cut(s) | 1299 |
| BseDI | CCNNGG | 3 cut(s) | 249, 525, 1171 |
| BseGI | GGATG | 5 cut(s) | 148, 421, 779, 939, 955 |
| BseJI | GATNNNNATC | 1 cut(s) | 938 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 52, 454, 1172 |
| BseMI | GCAATG | 4 cut(s) | 80, 321, 677, 1152 |
| BseMII | CTCAG | 3 cut(s) | 624, 899, 920 |
| BseNI | ACTGG | 1 cut(s) | 1092 |
| BseRI | GAGGAG | 1 cut(s) | 542 |
| BseXI | GCAGC | 3 cut(s) | 362, 367, 940 |
| BseYI | CCCAGC | 1 cut(s) | 149 |
| BshFI | GGCC | 2 cut(s) | 57, 295 |
| BshNI | GGYRCC | 1 cut(s) | 901 |
| BshVI | ATCGAT | 1 cut(s) | 1299 |
| BsiHKAI | GWGCWC | 2 cut(s) | 90, 276 |
| BsiHKCI | CYCGRG | 4 cut(s) | 83, 653, 971, 1290 |
| BsiSI | CCGG | 1 cut(s) | 91 |
| BslFI | GGGAC | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 52, 454, 1172 |
| BsmAI | GTCTC | 3 cut(s) | 113, 216, 656 |
| BsmFI | GGGAC | 1 cut(s) | 167 |
| BsmI | GAATGC | 1 cut(s) | 930 |
| BsnI | GGCC | 2 cut(s) | 57, 295 |
| BsoBI | CYCGRG | 4 cut(s) | 83, 653, 971, 1290 |
| Bsp1286I | GDGCHC | 2 cut(s) | 90, 276 |
| Bsp143I | GATC | 3 cut(s) | 345, 670, 687 |
| Bsp19I | CCATGG | 1 cut(s) | 1171 |
| BspACI | CCGC | 3 cut(s) | 354, 1105, 1319 |
| BspANI | GGCC | 2 cut(s) | 57, 295 |
| BspCNI | CTCAG | 3 cut(s) | 625, 900, 921 |
| BspDI | ATCGAT | 1 cut(s) | 1299 |
| BspLI | GGNNCC | 2 cut(s) | 56, 903 |
| BspMAI | CTGCAG | 1 cut(s) | 968 |
| BspMI | ACCTGC | 1 cut(s) | 509 |
| BspOI | GCTAGC | 1 cut(s) | 314 |
| BspPI | GGATC | 1 cut(s) | 695 |
| BspT107I | GGYRCC | 1 cut(s) | 901 |
| BspTI | CTTAAG | 1 cut(s) | 638 |
| BsrDI | GCAATG | 4 cut(s) | 80, 321, 677, 1152 |
| BsrI | ACTGG | 1 cut(s) | 1092 |
| BssECI | CCNNGG | 3 cut(s) | 249, 525, 1171 |
| BssMI | GATC | 3 cut(s) | 345, 670, 687 |
| BssT1I | CCWWGG | 2 cut(s) | 249, 1171 |
| Bst2UI | CCWGG | 1 cut(s) | 288 |
| Bst4CI | ACNGT | 4 cut(s) | 1035, 1059, 1075, 1133 |
| BstAFI | CTTAAG | 1 cut(s) | 638 |
| BstC8I | GCNNGC | 4 cut(s) | 312, 964, 968, 1247 |
| BstDEI | CTNAG | 5 cut(s) | 633, 683, 908, 929, 1241 |
| BstDSI | CCRYGG | 1 cut(s) | 1171 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 452 |
| BstF5I | GGATG | 5 cut(s) | 148, 421, 779, 939, 955 |
| BstHHI | GCGC | 1 cut(s) | 380 |
| BstKTI | GATC | 3 cut(s) | 348, 673, 690 |
| BstMAI | GTCTC | 3 cut(s) | 113, 216, 656 |
| BstMBI | GATC | 3 cut(s) | 345, 670, 687 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 85, 572, 959, 1223 |
| BstNI | CCWGG | 1 cut(s) | 288 |
| BstSCI | CCNGG | 1 cut(s) | 286 |
| BstSFI | CTRYAG | 3 cut(s) | 409, 964, 1100 |
| BstV1I | GCAGC | 3 cut(s) | 362, 367, 940 |
| BstV2I | GAAGAC | 2 cut(s) | 411, 1134 |
| BstX2I | RGATCY | 1 cut(s) | 670 |
| BstYI | RGATCY | 1 cut(s) | 670 |
| Bsu15I | ATCGAT | 1 cut(s) | 1299 |
| BsuRI | GGCC | 2 cut(s) | 57, 295 |
| BsuTUI | ATCGAT | 1 cut(s) | 1299 |
| BtgI | CCRYGG | 1 cut(s) | 1171 |
| BtsCI | GGATG | 5 cut(s) | 148, 421, 779, 939, 955 |
| BtsIMutI | CAGTG | 3 cut(s) | 489, 905, 1055 |
| BveI | ACCTGC | 1 cut(s) | 509 |
| Cac8I | GCNNGC | 4 cut(s) | 312, 964, 968, 1247 |
| CfoI | GCGC | 1 cut(s) | 380 |
| Cfr13I | GGNCC | 2 cut(s) | 55, 293 |
| ClaI | ATCGAT | 1 cut(s) | 1299 |
| Csp6I | GTAC | 1 cut(s) | 1274 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 927, 962 |
| CviAII | CATG | 7 cut(s) | 59, 334, 607, 718, 839, 943, 1172 |
| CviQI | GTAC | 1 cut(s) | 1274 |
| DdeI | CTNAG | 5 cut(s) | 633, 683, 908, 929, 1241 |
| DpnI | GATC | 3 cut(s) | 347, 672, 689 |
| DpnII | GATC | 3 cut(s) | 345, 670, 687 |
| Ecl136II | GAGCTC | 1 cut(s) | 274 |
| Eco130I | CCWWGG | 2 cut(s) | 249, 1171 |
| Eco24I | GRGCYC | 1 cut(s) | 276 |
| Eco32I | GATATC | 1 cut(s) | 1024 |
| Eco53kI | GAGCTC | 1 cut(s) | 274 |
| Eco57I | CTGAAG | 1 cut(s) | 423 |
| Eco88I | CYCGRG | 4 cut(s) | 83, 653, 971, 1290 |
| EcoICRI | GAGCTC | 1 cut(s) | 274 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 452 |
| EcoRII | CCWGG | 1 cut(s) | 286 |
| EcoRV | GATATC | 1 cut(s) | 1024 |
| EcoT14I | CCWWGG | 2 cut(s) | 249, 1171 |
| EcoT22I | ATGCAT | 1 cut(s) | 768 |
| EcoT38I | GRGCYC | 1 cut(s) | 276 |
| ErhI | CCWWGG | 2 cut(s) | 249, 1171 |
| FaeI | CATG | 7 cut(s) | 62, 337, 610, 721, 842, 946, 1175 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 119, 151 |
| FaqI | GGGAC | 1 cut(s) | 167 |
| FatI | CATG | 7 cut(s) | 58, 333, 606, 717, 838, 942, 1171 |
| FblI | GTMKAC | 1 cut(s) | 14 |
| Fnu4HI | GCNGC | 3 cut(s) | 376, 381, 954 |
| FokI | GGATG | 5 cut(s) | 155, 428, 766, 946, 962 |
| FriOI | GRGCYC | 1 cut(s) | 276 |
| Fsp4HI | GCNGC | 3 cut(s) | 376, 381, 954 |
| FspBI | CTAG | 4 cut(s) | 69, 311, 1016, 1214 |
| GlaI | GCGC | 1 cut(s) | 379 |
| GluI | GCNGC | 3 cut(s) | 376, 381, 954 |
| GsaI | CCCAGC | 1 cut(s) | 153 |
| GsuI | CTGGAG | 1 cut(s) | 309 |
| HaeIII | GGCC | 2 cut(s) | 57, 295 |
| HapII | CCGG | 1 cut(s) | 91 |
| HhaI | GCGC | 1 cut(s) | 380 |
| Hin1II | CATG | 7 cut(s) | 62, 337, 610, 721, 842, 946, 1175 |
| Hin6I | GCGC | 1 cut(s) | 378 |
| HinP1I | GCGC | 1 cut(s) | 378 |
| HincII | GTYRAC | 2 cut(s) | 15, 31 |
| HindII | GTYRAC | 2 cut(s) | 15, 31 |
| HinfI | GANTC | 8 cut(s) | 179, 226, 254, 537, 626, 1142, 1205, 1293 |
| HpaII | CCGG | 1 cut(s) | 91 |
| HphI | GGTGA | 3 cut(s) | 487, 635, 1102 |
| Hpy166II | GTNNAC | 4 cut(s) | 15, 31, 1055, 1093 |
| Hpy188I | TCNGA | 6 cut(s) | 142, 231, 403, 702, 1147, 1167 |
| Hpy188III | TCNNGA | 6 cut(s) | 213, 473, 632, 653, 973, 1229 |
| Hpy8I | GTNNAC | 4 cut(s) | 15, 31, 1055, 1093 |
| HpyAV | CCTTC | 3 cut(s) | 193, 1142, 1330 |
| HpyCH4III | ACNGT | 4 cut(s) | 1035, 1059, 1075, 1133 |
| HpyCH4IV | ACGT | 1 cut(s) | 24 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 85, 572, 959, 1223 |
| HpyF3I | CTNAG | 5 cut(s) | 633, 683, 908, 929, 1241 |
| HpySE526I | ACGT | 1 cut(s) | 24 |
| Hsp92II | CATG | 7 cut(s) | 62, 337, 610, 721, 842, 946, 1175 |
| HspAI | GCGC | 1 cut(s) | 378 |
| Kzo9I | GATC | 3 cut(s) | 345, 670, 687 |
| LmnI | GCTCC | 3 cut(s) | 271, 279, 1231 |
| Lsp1109I | GCAGC | 3 cut(s) | 362, 367, 940 |
| LweI | GCATC | 3 cut(s) | 235, 764, 940 |
| MaeI | CTAG | 4 cut(s) | 69, 311, 1016, 1214 |
| MaeII | ACGT | 1 cut(s) | 24 |
| MaeIII | GTNAC | 1 cut(s) | 1009 |
| MalI | GATC | 3 cut(s) | 347, 672, 689 |
| MboI | GATC | 3 cut(s) | 345, 670, 687 |
| MboII | GAAGA | 8 cut(s) | 362, 416, 680, 1124, 1127, 1130, 1133, 1139 |
| MfeI | CAATTG | 2 cut(s) | 587, 957 |
| MflI | RGATCY | 1 cut(s) | 670 |
| MhlI | GDGCHC | 2 cut(s) | 90, 276 |
| MluCI | AATT | 9 cut(s) | 19, 266, 320, 587, 613, 807, 957, 1159, 1221 |
| MlyI | GAGTC | 3 cut(s) | 1151, 1199, 1302 |
| MmeI | TCCRAC | 4 cut(s) | 514, 981, 1125, 1171 |
| Mph1103I | ATGCAT | 1 cut(s) | 768 |
| MseI | TTAA | 3 cut(s) | 611, 639, 761 |
| MslI | CAYNNNNRTG | 1 cut(s) | 93 |
| MspA1I | CMGCKG | 1 cut(s) | 1105 |
| MspCI | CTTAAG | 1 cut(s) | 638 |
| MspI | CCGG | 1 cut(s) | 91 |
| MspR9I | CCNGG | 1 cut(s) | 288 |
| MunI | CAATTG | 2 cut(s) | 587, 957 |
| Mva1269I | GAATGC | 1 cut(s) | 930 |
| MvaI | CCWGG | 1 cut(s) | 288 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 85, 572, 959, 1223 |
| NcoI | CCATGG | 1 cut(s) | 1171 |
| NdeII | GATC | 3 cut(s) | 345, 670, 687 |
| NheI | GCTAGC | 1 cut(s) | 310 |
| NlaIII | CATG | 7 cut(s) | 62, 337, 610, 721, 842, 946, 1175 |
| NlaIV | GGNNCC | 2 cut(s) | 56, 903 |
| NmeAIII | GCCGAG | 1 cut(s) | 550 |
| NsiI | ATGCAT | 1 cut(s) | 768 |
| OliI | CACNNNNGTG | 1 cut(s) | 93 |
| PaeR7I | CTCGAG | 4 cut(s) | 83, 653, 971, 1290 |
| PaqCI | CACCTGC | 1 cut(s) | 509 |
| PctI | GAATGC | 1 cut(s) | 930 |
| PfeI | GAWTC | 5 cut(s) | 179, 226, 254, 537, 626 |
| PkrI | GCNGC | 3 cut(s) | 377, 382, 955 |
| PleI | GAGTC | 3 cut(s) | 1150, 1199, 1301 |
| PpsI | GAGTC | 3 cut(s) | 1150, 1199, 1301 |
| PsiI | TTATAA | 1 cut(s) | 869 |
| Psp124BI | GAGCTC | 1 cut(s) | 276 |
| Psp6I | CCWGG | 1 cut(s) | 286 |
| PspFI | CCCAGC | 1 cut(s) | 149 |
| PspGI | CCWGG | 1 cut(s) | 286 |
| PspN4I | GGNNCC | 2 cut(s) | 56, 903 |
| PspPI | GGNCC | 2 cut(s) | 55, 293 |
| PspXI | VCTCGAGB | 2 cut(s) | 83, 1290 |
| PstI | CTGCAG | 1 cut(s) | 968 |
| PsuI | RGATCY | 1 cut(s) | 670 |
| RsaI | GTAC | 1 cut(s) | 1275 |
| RsaNI | GTAC | 1 cut(s) | 1274 |
| RseI | CAYNNNNRTG | 1 cut(s) | 93 |
| SacI | GAGCTC | 1 cut(s) | 276 |
| SalI | GTCGAC | 1 cut(s) | 13 |
| SaqAI | TTAA | 3 cut(s) | 611, 639, 761 |
| SatI | GCNGC | 3 cut(s) | 376, 381, 954 |
| Sau3AI | GATC | 3 cut(s) | 345, 670, 687 |
| Sau96I | GGNCC | 2 cut(s) | 55, 293 |
| SbfI | CCTGCAGG | 1 cut(s) | 968 |
| ScaI | AGTACT | 1 cut(s) | 1275 |
| SchI | GAGTC | 3 cut(s) | 1151, 1199, 1302 |
| ScrFI | CCNGG | 1 cut(s) | 288 |
| SdaI | CCTGCAGG | 1 cut(s) | 968 |
| SduI | GDGCHC | 2 cut(s) | 90, 276 |
| SfaNI | GCATC | 3 cut(s) | 235, 764, 940 |
| SfcI | CTRYAG | 3 cut(s) | 409, 964, 1100 |
| Sfr274I | CTCGAG | 4 cut(s) | 83, 653, 971, 1290 |
| SlaI | CTCGAG | 4 cut(s) | 83, 653, 971, 1290 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 93 |
| SmlI | CTYRAG | 6 cut(s) | 83, 473, 638, 653, 971, 1290 |
| SmoI | CTYRAG | 6 cut(s) | 83, 473, 638, 653, 971, 1290 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 968 |
| Sse9I | AATT | 9 cut(s) | 19, 266, 320, 587, 613, 807, 957, 1159, 1221 |
| SsiI | CCGC | 3 cut(s) | 354, 1105, 1319 |
| SspMI | CTAG | 4 cut(s) | 69, 311, 1016, 1214 |
| SstI | GAGCTC | 1 cut(s) | 276 |
| StyD4I | CCNGG | 1 cut(s) | 286 |
| StyI | CCWWGG | 2 cut(s) | 249, 1171 |
| TaaI | ACNGT | 4 cut(s) | 1035, 1059, 1075, 1133 |
| TaiI | ACGT | 1 cut(s) | 27 |
| TasI | AATT | 9 cut(s) | 19, 266, 320, 587, 613, 807, 957, 1159, 1221 |
| TatI | WGTACW | 1 cut(s) | 1273 |
| TfiI | GAWTC | 5 cut(s) | 179, 226, 254, 537, 626 |
| Tru1I | TTAA | 3 cut(s) | 611, 639, 761 |
| Tru9I | TTAA | 3 cut(s) | 611, 639, 761 |
| TscAI | CASTG | 3 cut(s) | 489, 912, 1062 |
| TseI | GCWGC | 3 cut(s) | 375, 380, 953 |
| TspDTI | ATGAA | 6 cut(s) | 332, 350, 432, 1067, 1140, 1167 |
| TspGWI | ACGGA | 1 cut(s) | 452 |
| TspRI | CASTG | 3 cut(s) | 489, 912, 1062 |
| Vha464I | CTTAAG | 1 cut(s) | 638 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 452 |
| XapI | RAATTY | 2 cut(s) | 320, 807 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 284 |
| XhoI | CTCGAG | 4 cut(s) | 83, 653, 971, 1290 |
| XmiI | GTMKAC | 1 cut(s) | 14 |
| XspI | CTAG | 4 cut(s) | 69, 311, 1016, 1214 |
| ZrmI | AGTACT | 1 cut(s) | 1275 |
| Zsp2I | ATGCAT | 1 cut(s) | 768 |