Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006676

Physical Location & Seq

Genomic Coordinates Forward (+)

3047643 .. 3049274

Gene Structure 1632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0039200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGACTACCTTCACCTTCACCATTTTCATTTCCCTTCTCTATCTCACTCCAACAATATCATCTCAAACATATTCCGGCAACCAAGGCCAATGGCAACTCCTACAACCCTCCATCGGCATCTCTGCCATGCACATGCAACTCCTCCACAACAACAAGGTCATCATGTTCGACCGCACCGACTTCGGCGCCTCCAACATCTCCCTCCCCGGCGGCCAGTGCCGCGACGACCCCAACGACACCGCTTTGCAACATGACTGCACTGCCCACTCCGTCCTCTACGACATAGGCCAAAACACCTTCCGTCCACTCACCATCCAAACAGATCCGTGGTGCTCCTCCGGCGCCGTCCTCCCCGACGGAACCCTAGTCCAAACCGGCGGATACAACGACGGCGACCGCTCGTTGAGAACATTCTCTCCATGCAATGACGACAGTTGTGATTGGAACGAAGAACCAAACTACTTACTAACACGCAGATGGTACGCCACTAATCAAATATTACCGGACGGAAGAGTAATCATAGTCGGAGGTAGAAGACAGTTTAATTACGAGTTCTACCCTCGCAGCAGTTCTTCCTCAACTATCTGGCTTGAGCTTCTGAGACAAACCAAAGACCAGGGAGACGAAAACAACCTGTATCCATTTCTACATCTCTTGCCCGACGGAAACTTGTTTATCTTCGCCAACACTAGGTCTATACTCTTCGACTACAAGCAAAACGCCGTCGTTAAGGAGCTCCCGGAAATCCCAGGTAATGAACCACGTAACTATCCAAGCACGGGCTCCTCCGTCTTGCTTCCTTTGGATGAGAACCAGCCCTTCCTCGAAGCAGAGATAGTAGTCTGCGGCGGCGCTCCACGTGGCTCGCGCATGCTTGCTGAGAGTGGGAGCTTTGTTGAGACTCTAGGCACGTGCGGGCGGATCAACGTGAATGATGCAAACCCTAACTGGGTCATGGAGGACATGCCTTTACCTAGAGCTATGGGTGACATGCTTATTTTACCAAACGGAGACGTACTGATCTTAAACGGCGTTGGACTTGGCACAGCTGGTTGGGAGCTCGGGCGGAACCCGGTGACCGCAGCTGTCATTTATCGCCCGTCTGAGCTCCCTGAGCGGCGCTTTAGGGTTATGGCTGAGTCAAAACGGCCGAGGCTGTACCATTCTTCGGCCGTTTTGATCACGGATGGGCGGGTTTTAGTAGGAGGAAGCAACCCTCATGTGGCCTACAACTTCACTGGAGTGGACTTCCCGACGGACCTGAGCTTGGAGGCGTTTTCGCCGCCGTATTTGGCCAGCGAATACGAAGCGGTACGGCCGAGAATCGTTTCGGTGGATGAGAGTATTGGGTATGGGGAACGATTTTTGGTTGCGTTCGCGGTGCCTGAGTACTTGGACTATAGTGTGTTATCGGTTACGTTGGTTGCGCCGTCGTTTACGACGCACTCTTTTGCTATGAACCAGAGAATGGTGATGATGAGGTTGGGCGGAGTTAGGCGCTTGGCGTTGGATACGTATGAGGTTGGGGTGGTGGGGCCGTCGGCGGCGGAGATTGCACCGCCGGGTTATTATTTGTTGTTTGTGGTGCATGCGAATATACCTAGTTCTGCCATGTGGGTGAAGTTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

543

Amino Acids

60.21

Weight (kDa)

5.0

Isoelectric Point (pI)

45.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	43 - 430	3.9e-186	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	439 - 541	3.2e-26	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08570 AT3G08660 AT3G08660 AT3G08660
fragaria_vesca	FvH4_6g09490 FvH4_6g09490 FvH4_6g09490 FvH4_6g09490
malus_domestica	MD04G1177100.v1.1 MD12G1192300.v1.1
prunus_persica	Prupe.6G296800_v2.0.a1 Prupe.6G296800_v2.0.a1
pyrus_communis	pycom04g15640 pycom12g17930
rosa_chinensis	RchiOBHm_Chr3g0460071
rosa_laevigata	RLG00000025046
rosa_multiflora	Rmu_sc0000449.1_g000056 Rmu_sc0007694.1_g000002
rosa_roxburghii	Rroxscaffold_6G00419870
rosa_rugosa	Rorug03G0039200 Rorug03G0039300
rosa_samantha	Rh3AG097700 Rh3BG100800 Rh3CG102900 Rh3DG102100
rosa_wichuraiana	Rw3G008240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	185, 341, 1381
AccB7I	CCANNNNNTGG	1 cut(s)	1468
AccBSI	CCGCTC	2 cut(s)	399, 1117
AccII	CGCG	3 cut(s)	222, 868, 1379
AclWI	GGATC	2 cut(s)	317, 929
AcoI	YGGCCR	5 cut(s)	211, 1148, 1170, 1293, 1316
AcvI	CACGTG	2 cut(s)	860, 912
AcyI	GRCGYC	2 cut(s)	186, 342
AfaI	GTAC	5 cut(s)	482, 1017, 1160, 1314, 1391
AfiI	CCNNNNNNNGG	8 cut(s)	113, 690, 779, 949, 1168, 1222, 1267, 1468
AjnI	CCWGG	2 cut(s)	615, 748
AleI	CACNNNNGTG	1 cut(s)	1241
AloI	GAACNNNNNNTCC	2 cut(s)	400, 432
AluBI	AGCT	9 cut(s)	595, 736, 891, 980, 1049, 1060, 1085, 1108, 1266
AluI	AGCT	9 cut(s)	595, 736, 891, 980, 1049, 1060, 1085, 1108, 1266
Alw21I	GWGCWC	4 cut(s)	335, 738, 1062, 1110
Alw26I	GTCTC	4 cut(s)	595, 615, 893, 1005
AlwI	GGATC	2 cut(s)	317, 929
Ama87I	CYCGRG	1 cut(s)	1061
AoxI	GGCC	9 cut(s)	85, 211, 286, 1148, 1170, 1224, 1293, 1316, 1535
ApeKI	GCWGC	2 cut(s)	564, 1082
Asp700I	GAANNNNTTC	1 cut(s)	1327
AspLEI	GCGC	7 cut(s)	188, 344, 854, 870, 1122, 1429, 1500
AspS9I	GGNCC	2 cut(s)	1258, 1535
AsuC2I	CCSGG	4 cut(s)	207, 740, 1073, 1563
AsuHPI	GGTGA	7 cut(s)	4, 10, 301, 998, 1087, 1483, 1630
AvaI	CYCGRG	1 cut(s)	1061
AvaII	GGWCC	1 cut(s)	1258
BalI	TGGCCA	1 cut(s)	1295
BanI	GGYRCC	3 cut(s)	185, 341, 1381
BanII	GRGCYC	4 cut(s)	738, 785, 1062, 1110
BbrPI	CACGTG	2 cut(s)	860, 912
BbsI	GAAGAC	1 cut(s)	541
Bbv12I	GWGCWC	4 cut(s)	335, 738, 1062, 1110
BbvI	GCAGC	2 cut(s)	576, 1094
BccI	CCATC	4 cut(s)	119, 320, 471, 1181
BcgI	CGANNNNNNTGC	2 cut(s)	163, 197
BciT130I	CCWGG	2 cut(s)	617, 750
BciVI	GTATCC	3 cut(s)	374, 648, 1504
BclI	TGATCA	1 cut(s)	1179
BcnI	CCSGG	4 cut(s)	207, 740, 1073, 1563
BcoDI	GTCTC	4 cut(s)	595, 615, 893, 1005
BfaI	CTAG	5 cut(s)	365, 690, 905, 975, 1602
BfmI	CTRYAG	1 cut(s)	1399
BfoI	RGCGCY	5 cut(s)	189, 345, 855, 1123, 1501
BfuI	GTATCC	3 cut(s)	374, 648, 1504
BisI	GCNGC	9 cut(s)	211, 220, 565, 847, 850, 1083, 1118, 1283, 1545
BlsI	GCNGC	9 cut(s)	212, 221, 566, 848, 851, 1084, 1119, 1284, 1546
BmcAI	AGTACT	1 cut(s)	1391
Bme1390I	CCNGG	6 cut(s)	207, 617, 740, 750, 1073, 1563
Bme18I	GGWCC	1 cut(s)	1258
BmeT110I	CYCGRG	1 cut(s)	1061
BmgT120I	GGNCC	2 cut(s)	1258, 1535
BmiI	GGNNCC	7 cut(s)	187, 343, 361, 784, 1070, 1383, 1536
BmrFI	CCNGG	6 cut(s)	207, 617, 740, 750, 1073, 1563
BmrI	ACTGGG	1 cut(s)	958
BmsI	GCATC	2 cut(s)	126, 925
BmuI	ACTGGG	1 cut(s)	958
BpiI	GAAGAC	1 cut(s)	541
BpmI	CTGGAG	1 cut(s)	1260
Bpu10I	CCTNAGC	2 cut(s)	1113, 1262
BpuEI	CTTGAG	1 cut(s)	611
BpuMI	CCSGG	4 cut(s)	207, 740, 1073, 1563
BsaAI	YACGTR	4 cut(s)	764, 860, 912, 1515
BsaHI	GRCGYC	2 cut(s)	186, 342
BsaJI	CCNNGG	6 cut(s)	82, 205, 326, 616, 748, 1151
BsaWI	WCCGGW	1 cut(s)	502
BsaXI	ACNNNNNCTCC	2 cut(s)	400, 430
Bsc4I	CCNNNNNNNGG	8 cut(s)	113, 690, 779, 949, 1168, 1222, 1267, 1468
Bse118I	RCCGGY	1 cut(s)	374
Bse1I	ACTGG	3 cut(s)	214, 953, 1243
Bse3DI	GCAATG	1 cut(s)	430
BseBI	CCWGG	2 cut(s)	617, 750
BseDI	CCNNGG	6 cut(s)	82, 205, 326, 616, 748, 1151
BseGI	GGATG	4 cut(s)	312, 811, 1192, 1342
BseLI	CCNNNNNNNGG	8 cut(s)	113, 690, 779, 949, 1168, 1222, 1267, 1468
BseMI	GCAATG	1 cut(s)	430
BseMII	CTCAG	7 cut(s)	590, 870, 1095, 1104, 1128, 1253, 1377
BseNI	ACTGG	3 cut(s)	214, 953, 1243
BseRI	GAGGAG	3 cut(s)	131, 325, 775
BseX3I	CGGCCG	3 cut(s)	1148, 1170, 1316
BseXI	GCAGC	2 cut(s)	576, 1094
BsgI	GTGCAG	1 cut(s)	241
Bsh1236I	CGCG	3 cut(s)	222, 868, 1379
Bsh1285I	CGRYCG	5 cut(s)	172, 397, 1151, 1173, 1319
BshFI	GGCC	9 cut(s)	87, 213, 288, 1150, 1172, 1226, 1295, 1318, 1537
BshNI	GGYRCC	3 cut(s)	185, 341, 1381
BsiEI	CGRYCG	5 cut(s)	172, 397, 1151, 1173, 1319
BsiHKAI	GWGCWC	4 cut(s)	335, 738, 1062, 1110
BsiHKCI	CYCGRG	1 cut(s)	1061
BsiSI	CCGG	8 cut(s)	75, 207, 339, 375, 503, 740, 1073, 1562
BslI	CCNNNNNNNGG	8 cut(s)	113, 690, 779, 949, 1168, 1222, 1267, 1468
BsmAI	GTCTC	4 cut(s)	595, 615, 893, 1005
BsmBI	CGTCTC	2 cut(s)	615, 1005
BsnI	GGCC	9 cut(s)	87, 213, 288, 1150, 1172, 1226, 1295, 1318, 1537
BsoBI	CYCGRG	1 cut(s)	1061
Bsp1286I	GDGCHC	5 cut(s)	335, 738, 785, 1062, 1110
Bsp143I	GATC	4 cut(s)	322, 921, 1020, 1179
BspANI	GGCC	9 cut(s)	87, 213, 288, 1150, 1172, 1226, 1295, 1318, 1537
BspCNI	CTCAG	7 cut(s)	591, 871, 1096, 1105, 1129, 1254, 1378
BspFNI	CGCG	3 cut(s)	222, 868, 1379
BspLI	GGNNCC	7 cut(s)	187, 343, 361, 784, 1070, 1383, 1536
BspPI	GGATC	2 cut(s)	317, 929
BspT107I	GGYRCC	3 cut(s)	185, 341, 1381
BsrBI	CCGCTC	2 cut(s)	399, 1117
BsrDI	GCAATG	1 cut(s)	430
BsrFI	RCCGGY	1 cut(s)	374
BsrI	ACTGG	3 cut(s)	214, 953, 1243
BssAI	RCCGGY	1 cut(s)	374
BssECI	CCNNGG	6 cut(s)	82, 205, 326, 616, 748, 1151
BssMI	GATC	4 cut(s)	322, 921, 1020, 1179
BssNI	GRCGYC	2 cut(s)	186, 342
BssT1I	CCWWGG	1 cut(s)	82
Bst2UI	CCWGG	2 cut(s)	617, 750
Bst4CI	ACNGT	2 cut(s)	434, 540
Bst6I	CTCTTC	2 cut(s)	505, 707
BstACI	GRCGYC	2 cut(s)	186, 342
BstBAI	YACGTR	4 cut(s)	764, 860, 912, 1515
BstC8I	GCNNGC	6 cut(s)	866, 872, 876, 917, 1297, 1590
BstDEI	CTNAG	7 cut(s)	599, 879, 1104, 1113, 1137, 1262, 1386
BstDSI	CCRYGG	1 cut(s)	326
BstEII	GGTNACC	1 cut(s)	1075
BstF5I	GGATG	4 cut(s)	312, 811, 1192, 1342
BstFNI	CGCG	3 cut(s)	222, 868, 1379
BstH2I	RGCGCY	5 cut(s)	189, 345, 855, 1123, 1501
BstHHI	GCGC	7 cut(s)	188, 344, 854, 870, 1122, 1429, 1500
BstKTI	GATC	4 cut(s)	325, 924, 1023, 1182
BstMAI	GTCTC	4 cut(s)	595, 615, 893, 1005
BstMBI	GATC	4 cut(s)	322, 921, 1020, 1179
BstMCI	CGRYCG	5 cut(s)	172, 397, 1151, 1173, 1319
BstMWI	GCNNNNNNNGC	6 cut(s)	84, 216, 219, 339, 1114, 1553
BstNI	CCWGG	2 cut(s)	617, 750
BstNSI	RCATGY	5 cut(s)	136, 874, 967, 994, 1592
BstPI	GGTNACC	1 cut(s)	1075
BstSCI	CCNGG	6 cut(s)	205, 615, 738, 748, 1071, 1561
BstSFI	CTRYAG	1 cut(s)	1399
BstSNI	TACGTA	1 cut(s)	1515
BstUI	CGCG	3 cut(s)	222, 868, 1379
BstV1I	GCAGC	2 cut(s)	576, 1094
BstV2I	GAAGAC	1 cut(s)	541
BstX2I	RGATCY	1 cut(s)	322
BstYI	RGATCY	1 cut(s)	322
BstZI	CGGCCG	3 cut(s)	1148, 1170, 1316
BsuI	GTATCC	3 cut(s)	374, 648, 1504
BsuRI	GGCC	9 cut(s)	87, 213, 288, 1150, 1172, 1226, 1295, 1318, 1537
BtgI	CCRYGG	1 cut(s)	326
BtsCI	GGATG	4 cut(s)	312, 811, 1192, 1342
BtsI	GCAGTG	1 cut(s)	258
BtsIMutI	CAGTG	3 cut(s)	221, 258, 1236
Cac8I	GCNNGC	6 cut(s)	866, 872, 876, 917, 1297, 1590
CfoI	GCGC	7 cut(s)	188, 344, 854, 870, 1122, 1429, 1500
Cfr10I	RCCGGY	1 cut(s)	374
Cfr13I	GGNCC	2 cut(s)	1258, 1535
CseI	GACGC	1 cut(s)	1450
Csp6I	GTAC	5 cut(s)	481, 1016, 1159, 1313, 1390
CviQI	GTAC	5 cut(s)	481, 1016, 1159, 1313, 1390
DdeI	CTNAG	7 cut(s)	599, 879, 1104, 1113, 1137, 1262, 1386
DinI	GGCGCC	2 cut(s)	187, 343
DpnI	GATC	4 cut(s)	324, 923, 1022, 1181
DpnII	GATC	4 cut(s)	322, 921, 1020, 1179
EaeI	YGGCCR	5 cut(s)	211, 1148, 1170, 1293, 1316
EagI	CGGCCG	3 cut(s)	1148, 1170, 1316
Eam1104I	CTCTTC	2 cut(s)	505, 707
EarI	CTCTTC	2 cut(s)	505, 707
EciI	GGCGGA	5 cut(s)	393, 934, 1081, 1503, 1562
Ecl136II	GAGCTC	3 cut(s)	736, 1060, 1108
EclXI	CGGCCG	3 cut(s)	1148, 1170, 1316
Eco105I	TACGTA	1 cut(s)	1515
Eco130I	CCWWGG	1 cut(s)	82
Eco24I	GRGCYC	4 cut(s)	738, 785, 1062, 1110
Eco47I	GGWCC	1 cut(s)	1258
Eco52I	CGGCCG	3 cut(s)	1148, 1170, 1316
Eco53kI	GAGCTC	3 cut(s)	736, 1060, 1108
Eco72I	CACGTG	2 cut(s)	860, 912
Eco88I	CYCGRG	1 cut(s)	1061
Eco91I	GGTNACC	1 cut(s)	1075
EcoICRI	GAGCTC	3 cut(s)	736, 1060, 1108
EcoO65I	GGTNACC	1 cut(s)	1075
EcoRII	CCWGG	2 cut(s)	615, 748
EcoT14I	CCWWGG	1 cut(s)	82
EcoT38I	GRGCYC	4 cut(s)	738, 785, 1062, 1110
EgeI	GGCGCC	2 cut(s)	187, 343
EheI	GGCGCC	2 cut(s)	187, 343
ErhI	CCWWGG	1 cut(s)	82
Esp3I	CGTCTC	2 cut(s)	615, 1005
FauI	CCCGC	2 cut(s)	908, 1185
FbaI	TGATCA	1 cut(s)	1179
Fnu4HI	GCNGC	9 cut(s)	211, 220, 565, 847, 850, 1083, 1118, 1283, 1545
FokI	GGATG	4 cut(s)	299, 818, 1199, 1349
FriOI	GRGCYC	4 cut(s)	738, 785, 1062, 1110
Fsp4HI	GCNGC	9 cut(s)	211, 220, 565, 847, 850, 1083, 1118, 1283, 1545
FspBI	CTAG	5 cut(s)	365, 690, 905, 975, 1602
GlaI	GCGC	7 cut(s)	187, 343, 853, 869, 1121, 1428, 1499
GluI	GCNGC	9 cut(s)	211, 220, 565, 847, 850, 1083, 1118, 1283, 1545
GsuI	CTGGAG	1 cut(s)	1260
HaeII	RGCGCY	5 cut(s)	189, 345, 855, 1123, 1501
HaeIII	GGCC	9 cut(s)	87, 213, 288, 1150, 1172, 1226, 1295, 1318, 1537
HapII	CCGG	8 cut(s)	75, 207, 339, 375, 503, 740, 1073, 1562
HgaI	GACGC	1 cut(s)	1450
HhaI	GCGC	7 cut(s)	188, 344, 854, 870, 1122, 1429, 1500
Hin1I	GRCGYC	2 cut(s)	186, 342
Hin6I	GCGC	7 cut(s)	186, 342, 852, 868, 1120, 1427, 1498
HinP1I	GCGC	7 cut(s)	186, 342, 852, 868, 1120, 1427, 1498
HinfI	GANTC	3 cut(s)	901, 1139, 1323
HpaII	CCGG	8 cut(s)	75, 207, 339, 375, 503, 740, 1073, 1562
HphI	GGTGA	7 cut(s)	4, 10, 301, 998, 1087, 1483, 1630
Hpy166II	GTNNAC	3 cut(s)	305, 1246, 1437
Hpy188I	TCNGA	3 cut(s)	527, 600, 1105
Hpy188III	TCNNGA	1 cut(s)	1252
Hpy8I	GTNNAC	3 cut(s)	305, 1246, 1437
Hpy99I	CGWCG	9 cut(s)	227, 359, 392, 665, 728, 1258, 1435, 1444, 1543
HpyAV	CCTTC	5 cut(s)	19, 25, 44, 307, 829
HpyCH4III	ACNGT	2 cut(s)	434, 540
HpyCH4IV	ACGT	7 cut(s)	763, 859, 911, 927, 1014, 1418, 1514
HpyCH4V	TGCA	9 cut(s)	130, 136, 247, 258, 423, 938, 1556, 1588, 1627
HpyF10VI	GCNNNNNNNGC	6 cut(s)	84, 216, 219, 339, 1114, 1553
HpyF3I	CTNAG	7 cut(s)	599, 879, 1104, 1113, 1137, 1262, 1386
HpySE526I	ACGT	7 cut(s)	763, 859, 911, 927, 1014, 1418, 1514
Hsp92I	GRCGYC	2 cut(s)	186, 342
HspAI	GCGC	7 cut(s)	186, 342, 852, 868, 1120, 1427, 1498
KasI	GGCGCC	2 cut(s)	185, 341
Ksp22I	TGATCA	1 cut(s)	1179
Kzo9I	GATC	4 cut(s)	322, 921, 1020, 1179
LmnI	GCTCC	8 cut(s)	338, 733, 741, 788, 859, 888, 1057, 1113
Lsp1109I	GCAGC	2 cut(s)	576, 1094
LweI	GCATC	2 cut(s)	126, 925
MaeI	CTAG	5 cut(s)	365, 690, 905, 975, 1602
MaeII	ACGT	7 cut(s)	763, 859, 911, 927, 1014, 1418, 1514
MaeIII	GTNAC	4 cut(s)	764, 986, 1075, 1414
MalI	GATC	4 cut(s)	324, 923, 1022, 1181
MbiI	CCGCTC	2 cut(s)	399, 1117
MboI	GATC	4 cut(s)	322, 921, 1020, 1179
MboII	GAAGA	7 cut(s)	461, 522, 546, 564, 670, 694, 1158
MflI	RGATCY	1 cut(s)	322
MhlI	GDGCHC	5 cut(s)	335, 738, 785, 1062, 1110
MlsI	TGGCCA	1 cut(s)	1295
MluCI	AATT	1 cut(s)	544
MluNI	TGGCCA	1 cut(s)	1295
Mly113I	GGCGCC	2 cut(s)	186, 342
MlyI	GAGTC	2 cut(s)	895, 1148
MmeI	TCCRAC	5 cut(s)	74, 216, 505, 1015, 1488
Mox20I	TGGCCA	1 cut(s)	1295
MroXI	GAANNNNTTC	1 cut(s)	1327
MscI	TGGCCA	1 cut(s)	1295
MseI	TTAA	3 cut(s)	543, 729, 1025
MslI	CAYNNNNRTG	4 cut(s)	131, 475, 1241, 1616
Msp20I	TGGCCA	1 cut(s)	1295
MspA1I	CMGCKG	2 cut(s)	1049, 1085
MspI	CCGG	8 cut(s)	75, 207, 339, 375, 503, 740, 1073, 1562
MspR9I	CCNGG	6 cut(s)	207, 617, 740, 750, 1073, 1563
MvaI	CCWGG	2 cut(s)	617, 750
MvnI	CGCG	3 cut(s)	222, 868, 1379
MwoI	GCNNNNNNNGC	6 cut(s)	84, 216, 219, 339, 1114, 1553
NarI	GGCGCC	2 cut(s)	186, 342
NciI	CCSGG	4 cut(s)	207, 740, 1073, 1563
NdeII	GATC	4 cut(s)	322, 921, 1020, 1179
NlaIV	GGNNCC	7 cut(s)	187, 343, 361, 784, 1070, 1383, 1536
NmeAIII	GCCGAG	2 cut(s)	1176, 1344
NmuCI	GTSAC	2 cut(s)	986, 1075
NspI	RCATGY	5 cut(s)	136, 874, 967, 994, 1592
OliI	CACNNNNGTG	1 cut(s)	1241
PaeI	GCATGC	2 cut(s)	874, 1592
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 231
PdmI	GAANNNNTTC	1 cut(s)	1327
PfeI	GAWTC	1 cut(s)	1323
PflMI	CCANNNNNTGG	1 cut(s)	1468
PfoI	TCCNGGA	1 cut(s)	738
PkrI	GCNGC	9 cut(s)	212, 221, 566, 848, 851, 1084, 1119, 1284, 1546
PleI	GAGTC	2 cut(s)	895, 1147
PluTI	GGCGCC	2 cut(s)	189, 345
PmaCI	CACGTG	2 cut(s)	860, 912
PmlI	CACGTG	2 cut(s)	860, 912
PpsI	GAGTC	2 cut(s)	895, 1147
Ppu21I	YACGTR	4 cut(s)	764, 860, 912, 1515
Psp124BI	GAGCTC	3 cut(s)	738, 1062, 1110
Psp6I	CCWGG	2 cut(s)	615, 748
PspCI	CACGTG	2 cut(s)	860, 912
PspEI	GGTNACC	1 cut(s)	1075
PspGI	CCWGG	2 cut(s)	615, 748
PspN4I	GGNNCC	7 cut(s)	187, 343, 361, 784, 1070, 1383, 1536
PspPI	GGNCC	2 cut(s)	1258, 1535
PsuI	RGATCY	1 cut(s)	322
PvuII	CAGCTG	2 cut(s)	1049, 1085
RsaI	GTAC	5 cut(s)	482, 1017, 1160, 1314, 1391
RsaNI	GTAC	5 cut(s)	481, 1016, 1159, 1313, 1390
RseI	CAYNNNNRTG	4 cut(s)	131, 475, 1241, 1616
SacI	GAGCTC	3 cut(s)	738, 1062, 1110
SaqAI	TTAA	3 cut(s)	543, 729, 1025
SatI	GCNGC	9 cut(s)	211, 220, 565, 847, 850, 1083, 1118, 1283, 1545
Sau3AI	GATC	4 cut(s)	322, 921, 1020, 1179
Sau96I	GGNCC	2 cut(s)	1258, 1535
ScaI	AGTACT	1 cut(s)	1391
SchI	GAGTC	2 cut(s)	895, 1148
ScrFI	CCNGG	6 cut(s)	207, 617, 740, 750, 1073, 1563
SduI	GDGCHC	5 cut(s)	335, 738, 785, 1062, 1110
SfaNI	GCATC	2 cut(s)	126, 925
SfcI	CTRYAG	1 cut(s)	1399
SfoI	GGCGCC	2 cut(s)	187, 343
SinI	GGWCC	1 cut(s)	1258
SmiMI	CAYNNNNRTG	4 cut(s)	131, 475, 1241, 1616
SmlI	CTYRAG	1 cut(s)	590
SmoI	CTYRAG	1 cut(s)	590
SnaBI	TACGTA	1 cut(s)	1515
SphI	GCATGC	2 cut(s)	874, 1592
Sse9I	AATT	1 cut(s)	544
SspDI	GGCGCC	2 cut(s)	185, 341
SspI	AATATT	1 cut(s)	498
SspMI	CTAG	5 cut(s)	365, 690, 905, 975, 1602
SstI	GAGCTC	3 cut(s)	738, 1062, 1110
StyD4I	CCNGG	6 cut(s)	205, 615, 738, 748, 1071, 1561
StyI	CCWWGG	1 cut(s)	82
TaaI	ACNGT	2 cut(s)	434, 540
TaiI	ACGT	7 cut(s)	766, 862, 914, 930, 1017, 1421, 1517
TaqI	TCGA	3 cut(s)	168, 705, 825
TasI	AATT	1 cut(s)	544
TatI	WGTACW	1 cut(s)	1389
TauI	GCSGC	7 cut(s)	213, 222, 849, 852, 1120, 1285, 1547
TfiI	GAWTC	1 cut(s)	1323
Tru1I	TTAA	3 cut(s)	543, 729, 1025
Tru9I	TTAA	3 cut(s)	543, 729, 1025
TscAI	CASTG	3 cut(s)	221, 265, 1243
TseFI	GTSAC	2 cut(s)	986, 1075
TseI	GCWGC	2 cut(s)	564, 1082
Tsp45I	GTSAC	2 cut(s)	986, 1075
TspDTI	ATGAA	3 cut(s)	16, 771, 1472
TspRI	CASTG	3 cut(s)	221, 265, 1243
Van91I	CCANNNNNTGG	1 cut(s)	1468
VpaK11BI	GGWCC	1 cut(s)	1258
XceI	RCATGY	5 cut(s)	136, 874, 967, 994, 1592
XmnI	GAANNNNTTC	1 cut(s)	1327
XspI	CTAG	5 cut(s)	365, 690, 905, 975, 1602
ZrmI	AGTACT	1 cut(s)	1391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.