Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0005729

Physical Location & Seq

Genomic Coordinates Forward (+)

1070694 .. 1072199

Gene Structure 1506 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1002900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGTCCTATAAAAATCTCTTTGGCTTTACTTCATTCTGCAACTTTCCATTTTTGCCATATTTGGCTGTCTCAGAAACAATAATATTGAGCATGAAAAACCTCCCCCTCCTCTTCCTTGCTATCCTCACCTTCAGTTGCCTGAACCCCGTTTCCGCAGCCTGCCACGTCGACGACGAAGCGGGTCTGCTTGCCTTCAAATCGGCCATCACAGCCGACCCATCTAACAAGCTAAGCTCATGGATAAAGGGTACAGACTGCTGCACATGGGCGGGTACAAACTGCCTCAACAACCGGGTCACCAGCCTCTCCCTCTCGGGTCAACCCGACAAGCCCAGTACTTACTTATCCGGTCAAATCTCGCCCTCCCTCTCCAAACTCAAATTCTTGAACGGCATCTATCTCCAAAACCTTAACCTCTCGGGTCCCTTCCCGGATCTCCTATTCGGACTACCCGACCTCAAATACGTCTACATTGAACACAACAAGCTCTCGGGTCGAATACCCAACACTATCGGCAACTTAACCCAACTCGAAGCACTCAGCTTTTACTACAACCGGTTCACCGGTCCAATTCCGAGTTCAATCTCCAAGCTGACCCGGCTCACCCAGCTCAACCTTGGCGGCAACATCTTAACCGGTTCGATCCCATCCGGCATTCAAAACCTCAAGAACCTCACCCTCTTCAACCTCGAGCAAAACGGGTTGTCGGGTCCCATCCCCGATTTCTTCACATCGTTTCCGGAGCTCCGAGTCCTCAGACTCTCCGGCAACTACTTTACCGGGAAAATCCCAGCTTCAATTTCCGCTTTGGCGCCAAAACTGGCCTACCTGGAGCTCGGCCACAACGCCCTGACCGGCCAAATCCCTGATTTTCTCGGCAATTTCAAGGCCCTCGACACCCTCAACCTCTCTAGCAACAAATTATCCGGCGTCGTGCCTCAGAAGTTCGCGAATCTGACCAAGATCTTCAACCTCGATCTTTCTCGTAATTACCTCACCGACCCGTTTCCGGAACTGAACGTGAGAGGCATCGAGTCCCTGGATTTGTCGTACAACAGCTTCCATCTGAAGCAAATTCCAAAATGGGTGACGTCGTCGCCGATCATCTACTCTCTGAAGCTCGCAAAGTGTGGGATCAAGTTGAAATTGGACGACTGGAAGCCGGCGGAGACGTATTTCTACGATTACATCGATTTATCAGAGAACGAGATTTCGGGGAGTCCAGTCGGGCTGCTGAACAGGACCGATTTCTTGGTGGGGTTTTGGGCTTCTGGGAATAAGTTGAAGTTTGATTTGGAGAAGTTGAGGATTGTGAAGACGTTGAAGTATTTGGACTTGTCGAGGAATTTGGTTTTCGGGAAGGTGCCGAGTGGAGTTTCAGGGCTGGAGAGACTGAACGTCAGCCACAATCATCTTTGCGGACCGCTTCCGGCCACCAAGTTTGGTGCTTCGGCGTTTCTGGGGAATGATTGTCTCTGTGGTGCTCCACTAGATCTCTGCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009507 GO:0009536 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0036094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8

Protein Analysis

502

Amino Acids

55.05

Weight (kDa)

8.86

Isoelectric Point (pI)

30.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	57 - 94	4e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	119 - 227	1.6e-08	Leucine-rich repeat region
LRR_8	PF13855	200 - 258	1.9e-06	Leucine rich repeat
LRR_14	PF23598	244 - 331	9.4e-06	Leucine-rich repeat region
LRR_8	PF13855	272 - 332	1e-10	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33590 AT1G33590 AT1G33590 AT1G33600 AT1G33600 AT1G33610 AT1G33612 AT1G33670 AT2G26380
fragaria_vesca	FvH4_2g00740
malus_domestica	MD05G1002900.v1.1
prunus_persica	Prupe.8G006300_v2.0.a1
pyrus_communis	pycom05g00270
rosa_chinensis	RchiOBHm_Chr6g0251101
rosa_laevigata	RLG00000015484
rosa_multiflora	Rmu_sc0002219.1_g000008 Rmu_sc0002219.1_g000013 Rmu_sc0002219.1_g000015 Rmu_sc0024842.1_g000002
rosa_roxburghii	Rroxscaffold_7G00217040
rosa_rugosa	Rorug05G0500300
rosa_samantha	Rh6AG008300 Rh6AG008900 Rh6BG002700 Rh6BG002800 Rh6CG006100 Rh6DG006300
rosa_wichuraiana	Rw6G000920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1094
AccB1I	GGYRCC	2 cut(s)	811, 1363
AccI	GTMKAC	2 cut(s)	168, 468
AccII	CGCG	1 cut(s)	950
AccIII	TCCGGA	2 cut(s)	739, 1009
AciI	CCGC	8 cut(s)	153, 179, 269, 621, 804, 1166, 1419, 1424
AclWI	GGATC	3 cut(s)	441, 637, 1142
AcoI	YGGCCR	4 cut(s)	201, 838, 856, 1431
AcsI	RAATTY	3 cut(s)	380, 1074, 1345
AcuI	CTGAAG	3 cut(s)	115, 1088, 1136
AcyI	GRCGYC	3 cut(s)	812, 930, 1091
AfaI	GTAC	4 cut(s)	250, 274, 337, 1052
AfiI	CCNNNNNNNGG	1 cut(s)	1009
AgeI	ACCGGT	3 cut(s)	555, 563, 635
AhdI	GACNNNNNGTC	1 cut(s)	1397
AjiI	CACGTC	1 cut(s)	166
AjnI	CCWGG	2 cut(s)	828, 1038
AjuI	GAANNNNNNNTTGG	6 cut(s)	365, 397, 562, 594, 1277, 1309
AloI	GAACNNNNNNTCC	2 cut(s)	134, 166
Alw21I	GWGCWC	3 cut(s)	747, 837, 1486
Alw26I	GTCTC	4 cut(s)	73, 1163, 1384, 1478
AlwI	GGATC	3 cut(s)	441, 637, 1142
Ama87I	CYCGRG	4 cut(s)	313, 418, 490, 689
Aor13HI	TCCGGA	2 cut(s)	739, 1009
AoxI	GGCC	6 cut(s)	201, 822, 838, 856, 888, 1431
ApeKI	GCWGC	3 cut(s)	155, 258, 1231
ApoI	RAATTY	3 cut(s)	380, 1074, 1345
AsiGI	ACCGGT	3 cut(s)	555, 563, 635
AspLEI	GCGC	1 cut(s)	814
AspS9I	GGNCC	6 cut(s)	422, 566, 710, 889, 1242, 1421
AsuC2I	CCSGG	4 cut(s)	293, 431, 598, 781
AsuHPI	GGTGA	7 cut(s)	118, 289, 553, 595, 667, 988, 1099
AvaI	CYCGRG	4 cut(s)	313, 418, 490, 689
AvaII	GGWCC	5 cut(s)	422, 566, 710, 1242, 1421
BanI	GGYRCC	2 cut(s)	811, 1363
BanII	GRGCYC	2 cut(s)	747, 837
BarI	GAAGNNNNNNTAC	2 cut(s)	1043, 1075
BbsI	GAAGAC	1 cut(s)	1322
Bbv12I	GWGCWC	3 cut(s)	747, 837, 1486
BbvI	GCAGC	3 cut(s)	167, 245, 1218
BccI	CCATC	5 cut(s)	212, 226, 655, 722, 1071
BceAI	ACGGC	1 cut(s)	406
BciT130I	CCWGG	2 cut(s)	830, 1040
BcnI	CCSGG	4 cut(s)	293, 431, 598, 781
BcoDI	GTCTC	4 cut(s)	73, 1163, 1384, 1478
BfaI	CTAG	2 cut(s)	912, 1490
BfoI	RGCGCY	1 cut(s)	815
BglII	AGATCT	2 cut(s)	963, 1492
BisI	GCNGC	4 cut(s)	156, 259, 622, 1232
BlpI	GCTNAGC	1 cut(s)	230
BlsI	GCNGC	4 cut(s)	157, 260, 623, 1233
BmcAI	AGTACT	1 cut(s)	337
Bme1390I	CCNGG	6 cut(s)	293, 431, 598, 781, 830, 1040
Bme18I	GGWCC	5 cut(s)	422, 566, 710, 1242, 1421
BmeRI	GACNNNNNGTC	1 cut(s)	1397
BmeT110I	CYCGRG	4 cut(s)	313, 418, 490, 689
BmgBI	CACGTC	1 cut(s)	166
BmgT120I	GGNCC	6 cut(s)	422, 566, 710, 889, 1242, 1421
BmiI	GGNNCC	6 cut(s)	423, 424, 711, 712, 813, 1365
BmrFI	CCNGG	6 cut(s)	293, 431, 598, 781, 830, 1040
BmrI	ACTGGG	1 cut(s)	327
BmsI	GCATC	2 cut(s)	402, 1038
BmuI	ACTGGG	1 cut(s)	327
BpiI	GAAGAC	1 cut(s)	1322
BpmI	CTGGAG	2 cut(s)	851, 1406
Bpu1102I	GCTNAGC	1 cut(s)	230
BpuEI	CTTGAG	1 cut(s)	650
BpuMI	CCSGG	4 cut(s)	293, 431, 598, 781
Bsa29I	ATCGAT	1 cut(s)	1191
BsaHI	GRCGYC	3 cut(s)	812, 930, 1091
BsaJI	CCNNGG	2 cut(s)	616, 1038
BsaWI	WCCGGW	6 cut(s)	347, 555, 563, 635, 739, 1009
Bsc4I	CCNNNNNNNGG	1 cut(s)	1009
Bse118I	RCCGGY	5 cut(s)	555, 563, 635, 854, 1162
Bse1I	ACTGG	4 cut(s)	333, 825, 1160, 1223
BseAI	TCCGGA	2 cut(s)	739, 1009
BseBI	CCWGG	2 cut(s)	830, 1040
BseCI	ATCGAT	1 cut(s)	1191
BseDI	CCNNGG	2 cut(s)	616, 1038
BseGI	GGATG	2 cut(s)	647, 714
BseLI	CCNNNNNNNGG	1 cut(s)	1009
BseMII	CTCAG	4 cut(s)	84, 553, 769, 953
BseNI	ACTGG	4 cut(s)	333, 825, 1160, 1223
BseRI	GAGGAG	1 cut(s)	98
BseXI	GCAGC	3 cut(s)	167, 245, 1218
BseYI	CCCAGC	2 cut(s)	606, 790
BsgI	GTGCAG	1 cut(s)	244
Bsh1236I	CGCG	1 cut(s)	950
BshFI	GGCC	6 cut(s)	203, 824, 840, 858, 890, 1433
BshNI	GGYRCC	2 cut(s)	811, 1363
BshTI	ACCGGT	3 cut(s)	555, 563, 635
BshVI	ATCGAT	1 cut(s)	1191
BsiHKAI	GWGCWC	3 cut(s)	747, 837, 1486
BsiHKCI	CYCGRG	4 cut(s)	313, 418, 490, 689
BslFI	GGGAC	3 cut(s)	408, 696, 1021
BslI	CCNNNNNNNGG	1 cut(s)	1009
BsmAI	GTCTC	4 cut(s)	73, 1163, 1384, 1478
BsmBI	CGTCTC	1 cut(s)	1163
BsmFI	GGGAC	3 cut(s)	408, 696, 1021
BsmI	GAATGC	1 cut(s)	654
BsnI	GGCC	6 cut(s)	203, 824, 840, 858, 890, 1433
BsoBI	CYCGRG	4 cut(s)	313, 418, 490, 689
Bsp1286I	GDGCHC	3 cut(s)	747, 837, 1486
Bsp13I	TCCGGA	2 cut(s)	739, 1009
Bsp143I	GATC	7 cut(s)	433, 642, 963, 976, 1101, 1134, 1492
Bsp1720I	GCTNAGC	1 cut(s)	230
Bsp68I	TCGCGA	1 cut(s)	950
BspACI	CCGC	8 cut(s)	153, 179, 269, 621, 804, 1166, 1419, 1424
BspANI	GGCC	6 cut(s)	203, 824, 840, 858, 890, 1433
BspCNI	CTCAG	4 cut(s)	83, 552, 768, 952
BspDI	ATCGAT	1 cut(s)	1191
BspEI	TCCGGA	2 cut(s)	739, 1009
BspFNI	CGCG	1 cut(s)	950
BspLI	GGNNCC	6 cut(s)	423, 424, 711, 712, 813, 1365
BspPI	GGATC	3 cut(s)	441, 637, 1142
BspT107I	GGYRCC	2 cut(s)	811, 1363
BsrFI	RCCGGY	5 cut(s)	555, 563, 635, 854, 1162
BsrI	ACTGG	4 cut(s)	333, 825, 1160, 1223
BssAI	RCCGGY	5 cut(s)	555, 563, 635, 854, 1162
BssECI	CCNNGG	2 cut(s)	616, 1038
BssMI	GATC	7 cut(s)	433, 642, 963, 976, 1101, 1134, 1492
BssNI	GRCGYC	3 cut(s)	812, 930, 1091
BssT1I	CCWWGG	1 cut(s)	616
Bst2UI	CCWGG	2 cut(s)	830, 1040
Bst6I	CTCTTC	2 cut(s)	116, 686
BstACI	GRCGYC	3 cut(s)	812, 930, 1091
BstC8I	GCNNGC	4 cut(s)	160, 189, 1122, 1164
BstDEI	CTNAG	5 cut(s)	70, 230, 539, 755, 939
BstEII	GGTNACC	1 cut(s)	295
BstF5I	GGATG	2 cut(s)	647, 714
BstFNI	CGCG	1 cut(s)	950
BstH2I	RGCGCY	1 cut(s)	815
BstHHI	GCGC	1 cut(s)	814
BstKTI	GATC	7 cut(s)	436, 645, 966, 979, 1104, 1137, 1495
BstMAI	GTCTC	4 cut(s)	73, 1163, 1384, 1478
BstMBI	GATC	7 cut(s)	433, 642, 963, 976, 1101, 1134, 1492
BstMWI	GCNNNNNNNGC	3 cut(s)	209, 598, 607
BstNI	CCWGG	2 cut(s)	830, 1040
BstPI	GGTNACC	1 cut(s)	295
BstSCI	CCNGG	6 cut(s)	291, 429, 596, 779, 828, 1038
BstUI	CGCG	1 cut(s)	950
BstV1I	GCAGC	3 cut(s)	167, 245, 1218
BstV2I	GAAGAC	1 cut(s)	1322
BstX2I	RGATCY	3 cut(s)	433, 963, 1492
BstYI	RGATCY	3 cut(s)	433, 963, 1492
Bsu15I	ATCGAT	1 cut(s)	1191
BsuRI	GGCC	6 cut(s)	203, 824, 840, 858, 890, 1433
BsuTUI	ATCGAT	1 cut(s)	1191
BtrI	CACGTC	1 cut(s)	166
BtsCI	GGATG	2 cut(s)	647, 714
BtuMI	TCGCGA	1 cut(s)	950
Cac8I	GCNNGC	4 cut(s)	160, 189, 1122, 1164
CfoI	GCGC	1 cut(s)	814
Cfr10I	RCCGGY	5 cut(s)	555, 563, 635, 854, 1162
Cfr13I	GGNCC	6 cut(s)	422, 566, 710, 889, 1242, 1421
ClaI	ATCGAT	1 cut(s)	1191
CpoI	CGGWCCG	1 cut(s)	1421
CseI	GACGC	1 cut(s)	919
Csp6I	GTAC	4 cut(s)	249, 273, 336, 1051
CspAI	ACCGGT	3 cut(s)	555, 563, 635
CspCI	CAANNNNNGTGG	2 cut(s)	1423, 1458
CspI	CGGWCCG	1 cut(s)	1421
CviAII	CATG	3 cut(s)	91, 237, 264
CviQI	GTAC	4 cut(s)	249, 273, 336, 1051
DdeI	CTNAG	5 cut(s)	70, 230, 539, 755, 939
DinI	GGCGCC	1 cut(s)	813
DpnI	GATC	7 cut(s)	435, 644, 965, 978, 1103, 1136, 1494
DpnII	GATC	7 cut(s)	433, 642, 963, 976, 1101, 1134, 1492
DriI	GACNNNNNGTC	1 cut(s)	1397
EaeI	YGGCCR	4 cut(s)	201, 838, 856, 1431
Eam1104I	CTCTTC	2 cut(s)	116, 686
Eam1105I	GACNNNNNGTC	1 cut(s)	1397
EarI	CTCTTC	2 cut(s)	116, 686
EciI	GGCGGA	1 cut(s)	1181
Ecl136II	GAGCTC	2 cut(s)	745, 835
Eco130I	CCWWGG	1 cut(s)	616
Eco24I	GRGCYC	2 cut(s)	747, 837
Eco47I	GGWCC	5 cut(s)	422, 566, 710, 1242, 1421
Eco53kI	GAGCTC	2 cut(s)	745, 835
Eco57I	CTGAAG	3 cut(s)	115, 1088, 1136
Eco88I	CYCGRG	4 cut(s)	313, 418, 490, 689
Eco91I	GGTNACC	1 cut(s)	295
EcoICRI	GAGCTC	2 cut(s)	745, 835
EcoO109I	RGGNCCY	3 cut(s)	422, 710, 889
EcoO65I	GGTNACC	1 cut(s)	295
EcoRII	CCWGG	2 cut(s)	828, 1038
EcoT14I	CCWWGG	1 cut(s)	616
EcoT38I	GRGCYC	2 cut(s)	747, 837
EgeI	GGCGCC	1 cut(s)	813
EheI	GGCGCC	1 cut(s)	813
ErhI	CCWWGG	1 cut(s)	616
Esp3I	CGTCTC	1 cut(s)	1163
FaeI	CATG	3 cut(s)	94, 240, 267
FaiI	YATR	5 cut(s)	9, 58, 92, 238, 265
FaqI	GGGAC	3 cut(s)	408, 696, 1021
FatI	CATG	3 cut(s)	90, 236, 263
FauI	CCCGC	2 cut(s)	172, 262
FblI	GTMKAC	2 cut(s)	168, 468
Fnu4HI	GCNGC	4 cut(s)	156, 259, 622, 1232
FokI	GGATG	2 cut(s)	634, 701
FriOI	GRGCYC	2 cut(s)	747, 837
Fsp4HI	GCNGC	4 cut(s)	156, 259, 622, 1232
FspBI	CTAG	2 cut(s)	912, 1490
GlaI	GCGC	1 cut(s)	813
GluI	GCNGC	4 cut(s)	156, 259, 622, 1232
GsaI	CCCAGC	2 cut(s)	610, 794
GsuI	CTGGAG	2 cut(s)	851, 1406
HaeII	RGCGCY	1 cut(s)	815
HaeIII	GGCC	6 cut(s)	203, 824, 840, 858, 890, 1433
HgaI	GACGC	1 cut(s)	919
HhaI	GCGC	1 cut(s)	814
Hin1I	GRCGYC	3 cut(s)	812, 930, 1091
Hin1II	CATG	3 cut(s)	94, 240, 267
Hin6I	GCGC	1 cut(s)	812
HinP1I	GCGC	1 cut(s)	812
HincII	GTYRAC	2 cut(s)	169, 320
HindII	GTYRAC	2 cut(s)	169, 320
HinfI	GANTC	5 cut(s)	750, 759, 952, 1034, 1219
HphI	GGTGA	7 cut(s)	118, 289, 553, 595, 667, 988, 1099
Hpy166II	GTNNAC	4 cut(s)	169, 320, 469, 561
Hpy188III	TCNNGA	6 cut(s)	385, 667, 740, 949, 1010, 1357
Hpy8I	GTNNAC	4 cut(s)	169, 320, 469, 561
Hpy99I	CGWCG	6 cut(s)	170, 173, 176, 935, 1096, 1099
HpyAV	CCTTC	4 cut(s)	139, 202, 436, 1354
HpyCH4IV	ACGT	7 cut(s)	165, 465, 1020, 1091, 1172, 1319, 1398
HpyCH4V	TGCA	3 cut(s)	39, 261, 1500
HpyF10VI	GCNNNNNNNGC	3 cut(s)	209, 598, 607
HpyF3I	CTNAG	5 cut(s)	70, 230, 539, 755, 939
HpySE526I	ACGT	7 cut(s)	165, 465, 1020, 1091, 1172, 1319, 1398
Hsp92I	GRCGYC	3 cut(s)	812, 930, 1091
Hsp92II	CATG	3 cut(s)	94, 240, 267
HspAI	GCGC	1 cut(s)	812
KasI	GGCGCC	1 cut(s)	811
KflI	GGGWCCC	2 cut(s)	422, 710
Kpn2I	TCCGGA	2 cut(s)	739, 1009
KroI	GCCGGC	1 cut(s)	1162
KroNI	GCCGGC	1 cut(s)	1164
Kzo9I	GATC	7 cut(s)	433, 642, 963, 976, 1101, 1134, 1492
LmnI	GCTCC	4 cut(s)	742, 750, 832, 1489
Lsp1109I	GCAGC	3 cut(s)	167, 245, 1218
LweI	GCATC	2 cut(s)	402, 1038
MaeI	CTAG	2 cut(s)	912, 1490
MaeII	ACGT	7 cut(s)	165, 465, 1020, 1091, 1172, 1319, 1398
MaeIII	GTNAC	2 cut(s)	295, 1087
MalI	GATC	7 cut(s)	435, 644, 965, 978, 1103, 1136, 1494
MboI	GATC	7 cut(s)	433, 642, 963, 976, 1101, 1134, 1492
MboII	GAAGA	5 cut(s)	103, 673, 718, 958, 1327
MflI	RGATCY	3 cut(s)	433, 963, 1492
MhlI	GDGCHC	3 cut(s)	747, 837, 1486
MluCI	AATT	9 cut(s)	380, 570, 798, 880, 920, 988, 1074, 1145, 1345
Mly113I	GGCGCC	1 cut(s)	812
MlyI	GAGTC	4 cut(s)	753, 759, 1043, 1228
MroI	TCCGGA	2 cut(s)	739, 1009
MroNI	GCCGGC	1 cut(s)	1162
MseI	TTAA	3 cut(s)	411, 521, 632
MspR9I	CCNGG	6 cut(s)	293, 431, 598, 781, 830, 1040
Mva1269I	GAATGC	1 cut(s)	654
MvaI	CCWGG	2 cut(s)	830, 1040
MvnI	CGCG	1 cut(s)	950
MwoI	GCNNNNNNNGC	3 cut(s)	209, 598, 607
NaeI	GCCGGC	1 cut(s)	1164
NarI	GGCGCC	1 cut(s)	812
NciI	CCSGG	4 cut(s)	293, 431, 598, 781
NdeII	GATC	7 cut(s)	433, 642, 963, 976, 1101, 1134, 1492
NgoMIV	GCCGGC	1 cut(s)	1162
NlaIII	CATG	3 cut(s)	94, 240, 267
NlaIV	GGNNCC	6 cut(s)	423, 424, 711, 712, 813, 1365
NmeAIII	GCCGAG	3 cut(s)	816, 855, 1392
NmuCI	GTSAC	2 cut(s)	295, 1087
NruI	TCGCGA	1 cut(s)	950
PaeR7I	CTCGAG	1 cut(s)	689
PcsI	WCGNNNNNNNCGW	4 cut(s)	171, 450, 1097, 1188
PctI	GAATGC	1 cut(s)	654
PdiI	GCCGGC	1 cut(s)	1164
PfeI	GAWTC	1 cut(s)	952
PflFI	GACNNNGTC	1 cut(s)	1093
PfoI	TCCNGGA	1 cut(s)	429
PinAI	ACCGGT	3 cut(s)	555, 563, 635
PkrI	GCNGC	4 cut(s)	157, 260, 623, 1233
PleI	GAGTC	4 cut(s)	753, 758, 1042, 1227
PluTI	GGCGCC	1 cut(s)	815
PpsI	GAGTC	4 cut(s)	753, 758, 1042, 1227
PpuMI	RGGWCCY	2 cut(s)	422, 710
Psp124BI	GAGCTC	2 cut(s)	747, 837
Psp5II	RGGWCCY	2 cut(s)	422, 710
Psp6I	CCWGG	2 cut(s)	828, 1038
PspEI	GGTNACC	1 cut(s)	295
PspFI	CCCAGC	2 cut(s)	606, 790
PspGI	CCWGG	2 cut(s)	828, 1038
PspN4I	GGNNCC	6 cut(s)	423, 424, 711, 712, 813, 1365
PspPI	GGNCC	6 cut(s)	422, 566, 710, 889, 1242, 1421
PspPPI	RGGWCCY	2 cut(s)	422, 710
PspXI	VCTCGAGB	1 cut(s)	689
PsuI	RGATCY	3 cut(s)	433, 963, 1492
PsyI	GACNNNGTC	1 cut(s)	1093
RruI	TCGCGA	1 cut(s)	950
RsaI	GTAC	4 cut(s)	250, 274, 337, 1052
RsaNI	GTAC	4 cut(s)	249, 273, 336, 1051
Rsr2I	CGGWCCG	1 cut(s)	1421
RsrII	CGGWCCG	1 cut(s)	1421
SacI	GAGCTC	2 cut(s)	747, 837
SalI	GTCGAC	1 cut(s)	167
SaqAI	TTAA	3 cut(s)	411, 521, 632
SatI	GCNGC	4 cut(s)	156, 259, 622, 1232
Sau3AI	GATC	7 cut(s)	433, 642, 963, 976, 1101, 1134, 1492
Sau96I	GGNCC	6 cut(s)	422, 566, 710, 889, 1242, 1421
ScaI	AGTACT	1 cut(s)	337
SchI	GAGTC	4 cut(s)	753, 759, 1043, 1228
ScrFI	CCNGG	6 cut(s)	293, 431, 598, 781, 830, 1040
SduI	GDGCHC	3 cut(s)	747, 837, 1486
SfaNI	GCATC	2 cut(s)	402, 1038
SfoI	GGCGCC	1 cut(s)	813
Sfr274I	CTCGAG	1 cut(s)	689
SgrDI	CGTCGACG	1 cut(s)	167
SinI	GGWCC	5 cut(s)	422, 566, 710, 1242, 1421
SlaI	CTCGAG	1 cut(s)	689
SmlI	CTYRAG	2 cut(s)	665, 689
SmoI	CTYRAG	2 cut(s)	665, 689
Sse9I	AATT	9 cut(s)	380, 570, 798, 880, 920, 988, 1074, 1145, 1345
SsiI	CCGC	8 cut(s)	153, 179, 269, 621, 804, 1166, 1419, 1424
SspDI	GGCGCC	1 cut(s)	811
SspI	AATATT	1 cut(s)	84
SspMI	CTAG	2 cut(s)	912, 1490
SstI	GAGCTC	2 cut(s)	747, 837
StyD4I	CCNGG	6 cut(s)	291, 429, 596, 779, 828, 1038
StyI	CCWWGG	1 cut(s)	616
TaiI	ACGT	7 cut(s)	168, 468, 1023, 1094, 1175, 1322, 1401
TaqII	GACCGA	1 cut(s)	1259
TasI	AATT	9 cut(s)	380, 570, 798, 880, 920, 988, 1074, 1145, 1345
TatI	WGTACW	1 cut(s)	335
TauI	GCSGC	1 cut(s)	624
TfiI	GAWTC	1 cut(s)	952
Tru1I	TTAA	3 cut(s)	411, 521, 632
Tru9I	TTAA	3 cut(s)	411, 521, 632
TseFI	GTSAC	2 cut(s)	295, 1087
TseI	GCWGC	3 cut(s)	155, 258, 1231
Tsp45I	GTSAC	2 cut(s)	295, 1087
TspDTI	ATGAA	2 cut(s)	21, 107
Tth111I	GACNNNGTC	1 cut(s)	1093
VpaK11BI	GGWCC	5 cut(s)	422, 566, 710, 1242, 1421
XapI	RAATTY	3 cut(s)	380, 1074, 1345
XcmI	CCANNNNNNNNNTGG	1 cut(s)	614
XhoI	CTCGAG	1 cut(s)	689
XmiI	GTMKAC	2 cut(s)	168, 468
XspI	CTAG	2 cut(s)	912, 1490
ZraI	GACGTC	1 cut(s)	1092
ZrmI	AGTACT	1 cut(s)	337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.