Rmu_sc0002219.1_g000013

Leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002219.1
Physical Location & Seq
Forward (+)
50295 .. 51725
1431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002219.1_g000013.1.cds

Sequence Viewer

Length: 1431 bp
atgaagcaccaccacctctccatcctcctcctcttcctcaccctcaccctccgctccctcacccccacctccgccgcctgccacgtcgacgaccaaaccggcctcctcgccttcaagtcaggcatcacagccgacccctccaacatgctcacctcatggaaaaagggcacagactgctgcacgtggaacggcctaaactgcgacagcaacaaccgggtcacaagcctgtccctcttgggccaacccgacaagcccaactccttcttatccggtacaatctctccctccctctcaaagctcacattcctagacggcatctatctcacggggctcagaaacctcacgggtcctttcccggttttcctcttccagctccccaatctcatattcgtctacatcgaaaacagcaagctctctggtcggatacccgattccgtcggtaacttgacccagctcgtgtcactcagtttttactacaaccgcttcaccggtccaatcccgagttcaatatcccggttgactcagttgagtcagctcaaactcggcggcaaccttttaaccgggtccatacccaccggcatcaaaaacctcaaccagctcaactatctgactctcgagcgaaacaggttgttgggtcccatacccgacttcttcgcctcttttccggagctcctaattctcaaacttttcggcaataagtttaccgggaaaattccagcttcaatctccgctttggcgccaaaattgctctacctcgagcttggccacaatgccttgaccggtcaaatcccagcatttctaggaaacttcaaggcccttgatacccttgatcttggttacaataaattaacaggcactgtgcctcagacacttgacaatttgaccaagatcttcaatctcgatctttctcataatcaacttgtggatccattcccacagctgaatgtgaaaggcattgagtcacttgatctatcttacaacaagttccatctgaatgagattccgaaatgggctacttcttcgccgatcatttactctctgaagcttgcaaattgcgggattaagctgaagctggaggactggaagccggaggagccctatttctatgactacattgatttgtcggggaatcagattacgggtagtccggttgggttgttgaacaagactgatttcttggtgggtttttgggcttccggaaacaagttgaagtttaatctggagagtttgaggattgtgcagacattgaaggacttagacgtgtccaggaatttggttttcgggaaggtgcctaagacagtgtctaggcttgacagattgaacgtcagctataatcatctgtgtggacagcttccggccaccaagtttccggcttcggcatttttggggaacgattgtctctgcggtcgtccactggctgcatgtaaataa

Protein Analysis

476

Amino Acids

52.47

Weight (kDa)

9.1

Isoelectric Point (pI)

28.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 736, 1288
AccBSI CCGCTC 1 cut(s) 54
AccI GTMKAC 2 cut(s) 87, 393
AccIII TCCGGA 2 cut(s) 664, 1196
AciI CCGC 8 cut(s) 52, 72, 75, 481, 546, 729, 1056, 1404
AclWI GGATC 2 cut(s) 920, 933
AcoI YGGCCR 2 cut(s) 763, 1356
AcsI RAATTY 2 cut(s) 711, 1270
AcuI CTGAAG 2 cut(s) 1061, 1088
AcvI CACGTG 1 cut(s) 183
AcyI GRCGYC 1 cut(s) 737
AfaI GTAC 1 cut(s) 274
AflIII ACRYGT 1 cut(s) 1260
AgeI ACCGGT 2 cut(s) 488, 779
AgsI TTSAA 9 cut(s) 115, 507, 723, 811, 895, 1162, 1210, 1249, 1321
AjiI CACGTC 2 cut(s) 85, 1261
AjnI CCWGG 1 cut(s) 1265
AjuI GAANNNNNNNTTGG 4 cut(s) 371, 403, 487, 519
Alw21I GWGCWC 1 cut(s) 672
Alw26I GTCTC 1 cut(s) 1403
AlwI GGATC 2 cut(s) 920, 933
AlwNI CAGNNNCTG 1 cut(s) 857
Ama87I CYCGRG 3 cut(s) 499, 614, 755
Aor13HI TCCGGA 2 cut(s) 664, 1196
AoxI GGCC 6 cut(s) 100, 190, 238, 763, 813, 1356
ApeKI GCWGC 2 cut(s) 177, 1418
ApoI RAATTY 2 cut(s) 711, 1270
AsiGI ACCGGT 2 cut(s) 488, 779
AspLEI GCGC 1 cut(s) 739
AspS9I GGNCC 6 cut(s) 238, 347, 491, 564, 635, 814
AsuC2I CCSGG 5 cut(s) 215, 356, 514, 562, 706
AsuHPI GGTGA 5 cut(s) 31, 37, 52, 142, 478
AvaI CYCGRG 3 cut(s) 499, 614, 755
AvaII GGWCC 4 cut(s) 347, 491, 564, 635
BaeGI GKGCMC 1 cut(s) 170
BalI TGGCCA 1 cut(s) 765
BamHI GGATCC 1 cut(s) 925
BanI GGYRCC 2 cut(s) 736, 1288
BanII GRGCYC 3 cut(s) 333, 672, 1098
BauI CACGAG 1 cut(s) 455
BbrPI CACGTG 1 cut(s) 183
Bbv12I GWGCWC 1 cut(s) 672
BbvI GCAGC 2 cut(s) 164, 1405
BccI CCATC 2 cut(s) 29, 996
BceAI ACGGC 2 cut(s) 205, 328
BciT130I CCWGG 1 cut(s) 1267
BciVI GTATCC 1 cut(s) 417
BcnI CCSGG 5 cut(s) 215, 356, 514, 562, 706
BcoDI GTCTC 1 cut(s) 1403
BfaI CTAG 3 cut(s) 308, 800, 1305
BfoI RGCGCY 1 cut(s) 740
BfuI GTATCC 1 cut(s) 417
BglII AGATCT 1 cut(s) 888
BisI GCNGC 4 cut(s) 75, 178, 547, 1419
BlsI GCNGC 4 cut(s) 76, 179, 548, 1420
Bme1390I CCNGG 6 cut(s) 215, 356, 514, 562, 706, 1267
Bme18I GGWCC 4 cut(s) 347, 491, 564, 635
BmeT110I CYCGRG 3 cut(s) 499, 614, 755
BmgBI CACGTC 2 cut(s) 85, 1261
BmgT120I GGNCC 6 cut(s) 238, 347, 491, 564, 635, 814
BmiI GGNNCC 8 cut(s) 348, 565, 636, 637, 738, 927, 1095, 1290
BmrFI CCNGG 6 cut(s) 215, 356, 514, 562, 706, 1267
BmsI GCATC 3 cut(s) 132, 324, 588
BpmI CTGGAG 2 cut(s) 1094, 1241
BpuMI CCSGG 5 cut(s) 215, 356, 514, 562, 706
BsaAI YACGTR 1 cut(s) 183
BsaHI GRCGYC 1 cut(s) 737
BsaWI WCCGGW 6 cut(s) 269, 488, 664, 779, 1147, 1196
BsaXI ACNNNNNCTCC 3 cut(s) 32, 265, 295
Bse118I RCCGGY 4 cut(s) 98, 488, 575, 779
Bse1I ACTGG 2 cut(s) 1085, 1419
BseAI TCCGGA 2 cut(s) 664, 1196
BseBI CCWGG 1 cut(s) 1267
BseGI GGATG 1 cut(s) 21
BseMII CTCAG 4 cut(s) 346, 478, 536, 878
BseNI ACTGG 2 cut(s) 1085, 1419
BseRI GAGGAG 4 cut(s) 17, 20, 95, 1106
BseSI GKGCMC 1 cut(s) 170
BseXI GCAGC 2 cut(s) 164, 1405
BseYI CCCAGC 2 cut(s) 450, 790
BsgI GTGCAG 2 cut(s) 163, 1259
Bsh1285I CGRYCG 1 cut(s) 1408
BshFI GGCC 6 cut(s) 102, 192, 240, 765, 815, 1358
BshNI GGYRCC 2 cut(s) 736, 1288
BshTI ACCGGT 2 cut(s) 488, 779
BsiEI CGRYCG 1 cut(s) 1408
BsiHKAI GWGCWC 1 cut(s) 672
BsiHKCI CYCGRG 3 cut(s) 499, 614, 755
BslFI GGGAC 2 cut(s) 214, 621
BsmAI GTCTC 1 cut(s) 1403
BsmFI GGGAC 2 cut(s) 214, 621
BsnI GGCC 6 cut(s) 102, 192, 240, 765, 815, 1358
BsoBI CYCGRG 3 cut(s) 499, 614, 755
Bsp1286I GDGCHC 4 cut(s) 170, 333, 672, 1098
Bsp13I TCCGGA 2 cut(s) 664, 1196
Bsp143I GATC 6 cut(s) 829, 888, 901, 925, 967, 1026
BspACI CCGC 8 cut(s) 52, 72, 75, 481, 546, 729, 1056, 1404
BspANI GGCC 6 cut(s) 102, 192, 240, 765, 815, 1358
BspCNI CTCAG 4 cut(s) 345, 477, 535, 877
BspEI TCCGGA 2 cut(s) 664, 1196
BspLI GGNNCC 8 cut(s) 348, 565, 636, 637, 738, 927, 1095, 1290
BspPI GGATC 2 cut(s) 920, 933
BspT107I GGYRCC 2 cut(s) 736, 1288
BsrBI CCGCTC 1 cut(s) 54
BsrFI RCCGGY 4 cut(s) 98, 488, 575, 779
BsrI ACTGG 2 cut(s) 1085, 1419
BssAI RCCGGY 4 cut(s) 98, 488, 575, 779
BssMI GATC 6 cut(s) 829, 888, 901, 925, 967, 1026
BssNI GRCGYC 1 cut(s) 737
BssSI CACGAG 1 cut(s) 455
Bst2BI CACGAG 1 cut(s) 455
Bst2UI CCWGG 1 cut(s) 1267
Bst4CI ACNGT 2 cut(s) 859, 1300
Bst6I CTCTTC 2 cut(s) 38, 371
BstACI GRCGYC 1 cut(s) 737
BstAPI GCANNNNNTGC 1 cut(s) 174
BstBAI YACGTR 1 cut(s) 183
BstC8I GCNNGC 3 cut(s) 79, 410, 1047
BstDEI CTNAG 6 cut(s) 332, 464, 522, 864, 1255, 1293
BstF5I GGATG 1 cut(s) 21
BstH2I RGCGCY 1 cut(s) 740
BstHHI GCGC 1 cut(s) 739
BstKTI GATC 6 cut(s) 832, 891, 904, 928, 970, 1029
BstMAI GTCTC 1 cut(s) 1403
BstMBI GATC 6 cut(s) 829, 888, 901, 925, 967, 1026
BstMCI CGRYCG 1 cut(s) 1408
BstMWI GCNNNNNNNGC 4 cut(s) 174, 198, 745, 1093
BstNI CCWGG 1 cut(s) 1267
BstNSI RCATGY 2 cut(s) 148, 1425
BstSCI CCNGG 6 cut(s) 213, 354, 512, 560, 704, 1265
BstSLI GKGCMC 1 cut(s) 170
BstV1I GCAGC 2 cut(s) 164, 1405
BstX2I RGATCY 2 cut(s) 888, 925
BstXI CCANNNNNNTGG 1 cut(s) 1273
BstYI RGATCY 2 cut(s) 888, 925
BsuI GTATCC 1 cut(s) 417
BsuRI GGCC 6 cut(s) 102, 192, 240, 765, 815, 1358
BtrI CACGTC 2 cut(s) 85, 1261
BtsCI GGATG 1 cut(s) 21
BtsIMutI CAGTG 3 cut(s) 855, 1305, 1412
Cac8I GCNNGC 3 cut(s) 79, 410, 1047
CaiI CAGNNNCTG 1 cut(s) 857
CfoI GCGC 1 cut(s) 739
Cfr10I RCCGGY 4 cut(s) 98, 488, 575, 779
Cfr13I GGNCC 6 cut(s) 238, 347, 491, 564, 635, 814
Csp6I GTAC 1 cut(s) 273
CspAI ACCGGT 2 cut(s) 488, 779
CviAII CATG 3 cut(s) 145, 156, 1422
CviQI GTAC 1 cut(s) 273
DdeI CTNAG 6 cut(s) 332, 464, 522, 864, 1255, 1293
DinI GGCGCC 1 cut(s) 738
DpnI GATC 6 cut(s) 831, 890, 903, 927, 969, 1028
DpnII GATC 6 cut(s) 829, 888, 901, 925, 967, 1026
EaeI YGGCCR 2 cut(s) 763, 1356
Eam1104I CTCTTC 2 cut(s) 38, 371
EarI CTCTTC 2 cut(s) 38, 371
EciI GGCGGA 1 cut(s) 61
Ecl136II GAGCTC 1 cut(s) 670
Eco24I GRGCYC 3 cut(s) 333, 672, 1098
Eco47I GGWCC 4 cut(s) 347, 491, 564, 635
Eco53kI GAGCTC 1 cut(s) 670
Eco57I CTGAAG 2 cut(s) 1061, 1088
Eco72I CACGTG 1 cut(s) 183
Eco88I CYCGRG 3 cut(s) 499, 614, 755
EcoICRI GAGCTC 1 cut(s) 670
EcoO109I RGGNCCY 3 cut(s) 347, 635, 814
EcoRII CCWGG 1 cut(s) 1265
EcoT38I GRGCYC 3 cut(s) 333, 672, 1098
EgeI GGCGCC 1 cut(s) 738
EheI GGCGCC 1 cut(s) 738
FaeI CATG 3 cut(s) 148, 159, 1425
FaiI YATR 9 cut(s) 146, 157, 386, 569, 641, 912, 1107, 1332, 1423
FaqI GGGAC 2 cut(s) 214, 621
FatI CATG 3 cut(s) 144, 155, 1421
FauI CCCGC 1 cut(s) 1049
FblI GTMKAC 2 cut(s) 87, 393
Fnu4HI GCNGC 4 cut(s) 75, 178, 547, 1419
FokI GGATG 1 cut(s) 8
FriOI GRGCYC 3 cut(s) 333, 672, 1098
Fsp4HI GCNGC 4 cut(s) 75, 178, 547, 1419
FspBI CTAG 3 cut(s) 308, 800, 1305
GlaI GCGC 1 cut(s) 738
GluI GCNGC 4 cut(s) 75, 178, 547, 1419
GsaI CCCAGC 2 cut(s) 454, 794
GsuI CTGGAG 2 cut(s) 1094, 1241
HaeII RGCGCY 1 cut(s) 740
HaeIII GGCC 6 cut(s) 102, 192, 240, 765, 815, 1358
HhaI GCGC 1 cut(s) 739
Hin1I GRCGYC 1 cut(s) 737
Hin1II CATG 3 cut(s) 148, 159, 1425
Hin6I GCGC 1 cut(s) 737
HinP1I GCGC 1 cut(s) 737
HincII GTYRAC 2 cut(s) 88, 519
HindII GTYRAC 2 cut(s) 88, 519
HindIII AAGCTT 1 cut(s) 1043
HinfI GANTC 7 cut(s) 431, 520, 529, 610, 959, 1000, 1129
HphI GGTGA 5 cut(s) 31, 37, 52, 142, 478
Hpy166II GTNNAC 6 cut(s) 88, 394, 519, 702, 1346, 1412
Hpy188I TCNGA 8 cut(s) 335, 423, 609, 867, 993, 1005, 1041, 1134
Hpy188III TCNNGA 7 cut(s) 499, 614, 665, 899, 1197, 1220, 1282
Hpy8I GTNNAC 6 cut(s) 88, 394, 519, 702, 1346, 1412
Hpy99I CGWCG 3 cut(s) 89, 92, 440
HpyAV CCTTC 4 cut(s) 121, 271, 1243, 1279
HpyCH4III ACNGT 2 cut(s) 859, 1300
HpyCH4IV ACGT 4 cut(s) 84, 182, 1260, 1323
HpyCH4V TGCA 4 cut(s) 180, 1049, 1240, 1421
HpyF10VI GCNNNNNNNGC 4 cut(s) 174, 198, 745, 1093
HpyF3I CTNAG 6 cut(s) 332, 464, 522, 864, 1255, 1293
HpySE526I ACGT 4 cut(s) 84, 182, 1260, 1323
Hsp92I GRCGYC 1 cut(s) 737
Hsp92II CATG 3 cut(s) 148, 159, 1425
HspAI GCGC 1 cut(s) 737
KasI GGCGCC 1 cut(s) 736
KflI GGGWCCC 1 cut(s) 635
Kpn2I TCCGGA 2 cut(s) 664, 1196
Kzo9I GATC 6 cut(s) 829, 888, 901, 925, 967, 1026
LmnI GCTCC 5 cut(s) 59, 378, 667, 675, 1093
Lsp1109I GCAGC 2 cut(s) 164, 1405
LweI GCATC 3 cut(s) 132, 324, 588
MaeI CTAG 3 cut(s) 308, 800, 1305
MaeII ACGT 4 cut(s) 84, 182, 1260, 1323
MaeIII GTNAC 5 cut(s) 217, 440, 459, 836, 960
MalI GATC 6 cut(s) 831, 890, 903, 927, 969, 1028
MbiI CCGCTC 1 cut(s) 54
MboI GATC 6 cut(s) 829, 888, 901, 925, 967, 1026
MboII GAAGA 5 cut(s) 25, 358, 643, 883, 1011
MflI RGATCY 2 cut(s) 888, 925
MhlI GDGCHC 4 cut(s) 170, 333, 672, 1098
MlsI TGGCCA 1 cut(s) 765
MluCI AATT 7 cut(s) 675, 711, 743, 845, 877, 1051, 1270
MluNI TGGCCA 1 cut(s) 765
Mly113I GGCGCC 1 cut(s) 737
MlyI GAGTC 4 cut(s) 514, 538, 604, 968
MmeI TCCRAC 2 cut(s) 165, 401
Mox20I TGGCCA 1 cut(s) 765
MroI TCCGGA 2 cut(s) 664, 1196
MscI TGGCCA 1 cut(s) 765
MseI TTAA 4 cut(s) 557, 848, 1062, 1215
MslI CAYNNNNRTG 2 cut(s) 993, 1341
Msp20I TGGCCA 1 cut(s) 765
MspA1I CMGCKG 1 cut(s) 940
MspR9I CCNGG 6 cut(s) 215, 356, 514, 562, 706, 1267
MvaI CCWGG 1 cut(s) 1267
MwoI GCNNNNNNNGC 4 cut(s) 174, 198, 745, 1093
NarI GGCGCC 1 cut(s) 737
NciI CCSGG 5 cut(s) 215, 356, 514, 562, 706
NdeII GATC 6 cut(s) 829, 888, 901, 925, 967, 1026
NlaIII CATG 3 cut(s) 148, 159, 1425
NlaIV GGNNCC 8 cut(s) 348, 565, 636, 637, 738, 927, 1095, 1290
NmeAIII GCCGAG 1 cut(s) 522
NmuCI GTSAC 3 cut(s) 217, 459, 960
NspI RCATGY 2 cut(s) 148, 1425
PaeR7I CTCGAG 2 cut(s) 614, 755
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PfeI GAWTC 3 cut(s) 431, 1000, 1129
PflFI GACNNNGTC 1 cut(s) 1300
PfoI TCCNGGA 1 cut(s) 1265
PinAI ACCGGT 2 cut(s) 488, 779
PkrI GCNGC 4 cut(s) 76, 179, 548, 1420
PleI GAGTC 4 cut(s) 514, 537, 604, 967
PluTI GGCGCC 1 cut(s) 740
PmaCI CACGTG 1 cut(s) 183
PmlI CACGTG 1 cut(s) 183
PpsI GAGTC 4 cut(s) 514, 537, 604, 967
Ppu21I YACGTR 1 cut(s) 183
PpuMI RGGWCCY 2 cut(s) 347, 635
Psp124BI GAGCTC 1 cut(s) 672
Psp5II RGGWCCY 2 cut(s) 347, 635
Psp6I CCWGG 1 cut(s) 1265
PspCI CACGTG 1 cut(s) 183
PspFI CCCAGC 2 cut(s) 450, 790
PspGI CCWGG 1 cut(s) 1265
PspN4I GGNNCC 8 cut(s) 348, 565, 636, 637, 738, 927, 1095, 1290
PspPI GGNCC 6 cut(s) 238, 347, 491, 564, 635, 814
PspPPI RGGWCCY 2 cut(s) 347, 635
PspXI VCTCGAGB 1 cut(s) 755
PstNI CAGNNNCTG 1 cut(s) 857
PsuI RGATCY 2 cut(s) 888, 925
PsyI GACNNNGTC 1 cut(s) 1300
PvuII CAGCTG 1 cut(s) 940
RsaI GTAC 1 cut(s) 274
RsaNI GTAC 1 cut(s) 273
RseI CAYNNNNRTG 2 cut(s) 993, 1341
SacI GAGCTC 1 cut(s) 672
SalI GTCGAC 1 cut(s) 86
SaqAI TTAA 4 cut(s) 557, 848, 1062, 1215
SatI GCNGC 4 cut(s) 75, 178, 547, 1419
Sau3AI GATC 6 cut(s) 829, 888, 901, 925, 967, 1026
Sau96I GGNCC 6 cut(s) 238, 347, 491, 564, 635, 814
SchI GAGTC 4 cut(s) 514, 538, 604, 968
ScrFI CCNGG 6 cut(s) 215, 356, 514, 562, 706, 1267
SduI GDGCHC 4 cut(s) 170, 333, 672, 1098
SfaNI GCATC 3 cut(s) 132, 324, 588
SfoI GGCGCC 1 cut(s) 738
Sfr274I CTCGAG 2 cut(s) 614, 755
SgrDI CGTCGACG 1 cut(s) 86
SinI GGWCC 4 cut(s) 347, 491, 564, 635
SlaI CTCGAG 2 cut(s) 614, 755
SmiMI CAYNNNNRTG 2 cut(s) 993, 1341
SmlI CTYRAG 2 cut(s) 614, 755
SmoI CTYRAG 2 cut(s) 614, 755
Sse9I AATT 7 cut(s) 675, 711, 743, 845, 877, 1051, 1270
SsiI CCGC 8 cut(s) 52, 72, 75, 481, 546, 729, 1056, 1404
SspDI GGCGCC 1 cut(s) 736
SspMI CTAG 3 cut(s) 308, 800, 1305
SstI GAGCTC 1 cut(s) 672
StyD4I CCNGG 6 cut(s) 213, 354, 512, 560, 704, 1265
TaaI ACNGT 2 cut(s) 859, 1300
TaiI ACGT 4 cut(s) 87, 185, 1263, 1326
TaqI TCGA 5 cut(s) 87, 399, 615, 756, 900
TasI AATT 7 cut(s) 675, 711, 743, 845, 877, 1051, 1270
TauI GCSGC 2 cut(s) 77, 549
TfiI GAWTC 3 cut(s) 431, 1000, 1129
Tru1I TTAA 4 cut(s) 557, 848, 1062, 1215
Tru9I TTAA 4 cut(s) 557, 848, 1062, 1215
TscAI CASTG 3 cut(s) 862, 1305, 1419
TseFI GTSAC 3 cut(s) 217, 459, 960
TseI GCWGC 2 cut(s) 177, 1418
Tsp45I GTSAC 3 cut(s) 217, 459, 960
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 424
TspRI CASTG 3 cut(s) 862, 1305, 1419
Tth111I GACNNNGTC 1 cut(s) 1300
VpaK11BI GGWCC 4 cut(s) 347, 491, 564, 635
XapI RAATTY 2 cut(s) 711, 1270
XceI RCATGY 2 cut(s) 148, 1425
XhoI CTCGAG 2 cut(s) 614, 755
XmiI GTMKAC 2 cut(s) 87, 393
XspI CTAG 3 cut(s) 308, 800, 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.