MD05G1085400.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0007482
Physical Location & Seq
Forward (+)
17897462 .. 17898958
1497 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1085400.v1.1.491

Sequence Viewer

Length: 1497 bp
ATGGATTCTCAAGCCGAACCCAAGCTTGAAATTTTCTTTTTTCCTTACATACTTGGTGGTCACTTGATCCCCATGATAGACCTAGCCAGACTCTTTGCTTCTCATGGCGTGAAGGCCACCATTGTCACAACCCCTCACAATGTCCTCCTCTTCCAAAACCCCATCCTCAGAGACCAACAACTAGGCTATGATATAGGCTTCCTCACCTTAAATTTCCCGGCTGAAGAGTTTGGTCTCCCGAACGGTTGCGAAAACGAACTCACAACCACTAATGGTGACATGTTCACCAAACTCTTCATGGCTGCCATGAAGCTCCAAGACCCTCTCCGGAAGCTCCTTAGCCAGACCCGACCGGACTGTCTTATCTCGGACAGGCTTTATCCTTGGATTGCAGATGTCACTAACGGGCTTGGAATCCCTAGGGTTGTGTTTGATGGGAGTGGCTGCTTCTCTCACTGTGTGGAGGAAAGTCTCAGACGGTATGCTCCACATGAGAAAGTTGTGTTTGAAACTGAGTCTTTTCTCGTGCCCGGCCTACCCAACCAAATCGAGCTCAAAAGGTCAATGCTGCCGGATTATGTCAAAGCCGAAAATGTGTTCACTCATTTTCTCAATGAGGCTCTAGAGTGTGAGATTAAAAGCTATGGGATTGTGGTGAACAGCTTCTACGAGCTAGAACAAGCTTATGCTGATTACTTTCAGAAGGATATGAAGAGGAAGATATGGCACATAGGGCCGGTCTCATTGTACAACCGGACCAACATCGACAAGGTCGAAAGAGGCATCAAAACCTCCATTGATGAGCATAGTTGTTTGAGTTGGCTTGATTCTAGAGACCCCAACTCAGTTCTTTACATAAGCTTTGGAAGCATGCCAAGAATCACTTCAGCTCAGCTTTTGGAAATTGCTCATGGGCTTGAAGCTTCCAACCACCCTTTCATTTGGGTGATTGGGAGGATTTTAGACTACTCATCAAAAGAGAAGCAACAAGTGGAAAGTGTTGTGCTTCCTGTGGGATTCGAAGAAAGGATTACGAAATCGAAAAGAGGGCTTATGATAAGAGGCTGGGCTCCTCAGCTTTTGATTTTAGAACACCCAGCTGTTGGTGCTTATATGAACCATTGTGGGTGGAACTCCATCATTGAAGGTGTCACAGCTGGTCTGCCAATGATCACATGGCCTTTCTCCTCGGAGCAGTTCTACAATGAGAGGTTCATTCTCAATGTCATAAGGGTTGGGATTTCAATGGGGAATGAGGACTGGGTTCCACTGAAGGAGGTGCCTAGGGTGACCATAAAGAGGGACAAGGTTGCCCATGTTGTGAACAGACTAATGGGATGTGAAGAAGATGAAGTGGTTGACATGAGAAAGAGAGCAGAAGAGTTTAGAGACAAAGCCATGAAAGCTTTTGAAAAAGGTGGCTCTTCTCATTCCAATGTTCATGCTTTCATTGCCGAGCTCAAGTCTTGCCGGAAAATTAGTCAAAATGGTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

499

Amino Acids

56.7

Weight (kDa)

6.09

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 276 - 404 7.1e-16 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 357
AccB1I GGYRCC 1 cut(s) 1279
AccB7I CCANNNNNTGG 1 cut(s) 1103
AccIII TCCGGA 1 cut(s) 327
AclWI GGATC 1 cut(s) 61
AcsI RAATTY 2 cut(s) 30, 211
AcuI CTGAAG 3 cut(s) 243, 870, 1292
AdeI CACNNNGTG 1 cut(s) 460
AfaI GTAC 1 cut(s) 749
AfiI CCNNNNNNNGG 2 cut(s) 1103, 1299
AflIII ACRYGT 1 cut(s) 279
AgsI TTSAA 6 cut(s) 29, 509, 920, 1145, 1245, 1412
AjuI GAANNNNNNNTTGG 4 cut(s) 868, 900, 920, 952
Alw21I GWGCWC 2 cut(s) 555, 1461
Alw26I GTCTC 6 cut(s) 165, 239, 476, 745, 828, 1383
AlwI GGATC 1 cut(s) 61
Aor13HI TCCGGA 1 cut(s) 327
AoxI GGCC 4 cut(s) 114, 532, 734, 1178
ApeKI GCWGC 3 cut(s) 302, 444, 568
ApoI RAATTY 2 cut(s) 30, 211
Asp700I GAANNNNTTC 2 cut(s) 662, 883
AspA2I CCTAGG 2 cut(s) 419, 1283
AspS9I GGNCC 2 cut(s) 734, 756
AsuC2I CCSGG 2 cut(s) 218, 531
AsuHPI GGTGA 6 cut(s) 196, 277, 287, 667, 958, 1300
AsuII TTCGAA 1 cut(s) 1020
AvaII GGWCC 1 cut(s) 756
AvrII CCTAGG 2 cut(s) 419, 1283
BaeGI GKGCMC 1 cut(s) 531
BanI GGYRCC 1 cut(s) 1279
BanII GRGCYC 3 cut(s) 555, 1072, 1461
BauI CACGAG 1 cut(s) 524
Bbv12I GWGCWC 2 cut(s) 555, 1461
BbvCI CCTCAGC 1 cut(s) 1074
BbvI GCAGC 3 cut(s) 289, 431, 555
BccI CCATC 3 cut(s) 170, 428, 1145
BclI TGATCA 1 cut(s) 1170
BcnI CCSGG 2 cut(s) 218, 531
BcoDI GTCTC 6 cut(s) 165, 239, 476, 745, 828, 1383
BfaI CTAG 7 cut(s) 83, 182, 420, 623, 674, 831, 1284
BisI GCNGC 3 cut(s) 303, 445, 569
BlnI CCTAGG 2 cut(s) 419, 1283
BlpI GCTNAGC 1 cut(s) 891
BlsI GCNGC 3 cut(s) 304, 446, 570
Bme1390I CCNGG 2 cut(s) 218, 531
Bme18I GGWCC 1 cut(s) 756
BmgT120I GGNCC 2 cut(s) 734, 756
BmiI GGNNCC 3 cut(s) 1071, 1266, 1281
BmrFI CCNGG 2 cut(s) 218, 531
BmrI ACTGGG 1 cut(s) 1270
BmsI GCATC 1 cut(s) 792
BmuI ACTGGG 1 cut(s) 1270
Bpu10I CCTNAGC 2 cut(s) 338, 1074
Bpu1102I GCTNAGC 1 cut(s) 891
Bpu14I TTCGAA 1 cut(s) 1020
BpuEI CTTGAG 1 cut(s) 1445
BpuMI CCSGG 2 cut(s) 218, 531
BsaI GGTCTC 4 cut(s) 165, 239, 745, 828
BsaJI CCNNGG 4 cut(s) 383, 419, 1188, 1283
BsaWI WCCGGW 3 cut(s) 327, 352, 753
Bsc4I CCNNNNNNNGG 2 cut(s) 1103, 1299
Bse118I RCCGGY 1 cut(s) 736
Bse1I ACTGG 1 cut(s) 1265
Bse3DI GCAATG 1 cut(s) 1449
BseAI TCCGGA 1 cut(s) 327
BseDI CCNNGG 4 cut(s) 383, 419, 1188, 1283
BseGI GGATG 2 cut(s) 162, 1343
BseLI CCNNNNNNNGG 2 cut(s) 1103, 1299
BseMI GCAATG 1 cut(s) 1449
BseMII CTCAG 6 cut(s) 181, 487, 504, 858, 905, 1088
BseNI ACTGG 1 cut(s) 1265
BseRI GAGGAG 3 cut(s) 137, 1062, 1177
BseSI GKGCMC 1 cut(s) 531
BseXI GCAGC 3 cut(s) 289, 431, 555
BseYI CCCAGC 2 cut(s) 1065, 1096
Bsh1285I CGRYCG 1 cut(s) 353
BshFI GGCC 4 cut(s) 116, 534, 736, 1180
BshNI GGYRCC 1 cut(s) 1279
BsiEI CGRYCG 1 cut(s) 353
BsiHKAI GWGCWC 2 cut(s) 555, 1461
BsiSI CCGG 8 cut(s) 218, 328, 353, 531, 572, 737, 754, 1471
BslFI GGGAC 1 cut(s) 1316
BslI CCNNNNNNNGG 2 cut(s) 1103, 1299
BsmAI GTCTC 6 cut(s) 165, 239, 476, 745, 828, 1383
BsmFI GGGAC 1 cut(s) 1316
BsnI GGCC 4 cut(s) 116, 534, 736, 1180
Bso31I GGTCTC 4 cut(s) 165, 239, 745, 828
Bsp119I TTCGAA 1 cut(s) 1020
Bsp1286I GDGCHC 4 cut(s) 531, 555, 1072, 1461
Bsp13I TCCGGA 1 cut(s) 327
Bsp1407I TGTACA 1 cut(s) 747
Bsp143I GATC 2 cut(s) 66, 1170
Bsp1720I GCTNAGC 1 cut(s) 891
BspANI GGCC 4 cut(s) 116, 534, 736, 1180
BspCNI CTCAG 6 cut(s) 180, 486, 505, 857, 904, 1087
BspEI TCCGGA 1 cut(s) 327
BspLI GGNNCC 3 cut(s) 1071, 1266, 1281
BspPI GGATC 1 cut(s) 61
BspQI GCTCTTC 1 cut(s) 1429
BspT104I TTCGAA 1 cut(s) 1020
BspT107I GGYRCC 1 cut(s) 1279
BspTNI GGTCTC 4 cut(s) 165, 239, 745, 828
BsrDI GCAATG 1 cut(s) 1449
BsrFI RCCGGY 1 cut(s) 736
BsrGI TGTACA 1 cut(s) 747
BsrI ACTGG 1 cut(s) 1265
BssAI RCCGGY 1 cut(s) 736
BssECI CCNNGG 4 cut(s) 383, 419, 1188, 1283
BssMI GATC 2 cut(s) 66, 1170
BssSI CACGAG 1 cut(s) 524
BssT1I CCWWGG 3 cut(s) 383, 419, 1283
Bst2BI CACGAG 1 cut(s) 524
Bst4CI ACNGT 4 cut(s) 245, 359, 458, 480
Bst6I CTCTTC 6 cut(s) 155, 219, 299, 707, 1374, 1429
BstAUI TGTACA 1 cut(s) 747
BstBI TTCGAA 1 cut(s) 1020
BstC8I GCNNGC 1 cut(s) 872
BstDEI CTNAG 7 cut(s) 167, 338, 473, 513, 844, 891, 1074
BstEII GGTNACC 1 cut(s) 1288
BstF5I GGATG 2 cut(s) 162, 1343
BstKTI GATC 2 cut(s) 69, 1173
BstMAI GTCTC 6 cut(s) 165, 239, 476, 745, 828, 1383
BstMBI GATC 2 cut(s) 66, 1170
BstMCI CGRYCG 1 cut(s) 353
BstMWI GCNNNNNNNGC 5 cut(s) 733, 867, 1106, 1403, 1451
BstNSI RCATGY 2 cut(s) 283, 874
BstPI GGTNACC 1 cut(s) 1288
BstSCI CCNGG 2 cut(s) 216, 529
BstSLI GKGCMC 1 cut(s) 531
BstV1I GCAGC 3 cut(s) 289, 431, 555
BsuRI GGCC 4 cut(s) 116, 534, 736, 1180
BtsCI GGATG 2 cut(s) 162, 1343
BtsIMutI CAGTG 2 cut(s) 454, 1268
Cac8I GCNNGC 1 cut(s) 872
Cfr10I RCCGGY 1 cut(s) 736
Cfr13I GGNCC 2 cut(s) 734, 756
Csp6I GTAC 1 cut(s) 748
CviQI GTAC 1 cut(s) 748
DdeI CTNAG 7 cut(s) 167, 338, 473, 513, 844, 891, 1074
DpnI GATC 2 cut(s) 68, 1172
DpnII GATC 2 cut(s) 66, 1170
DraIII CACNNNGTG 1 cut(s) 460
DrdI GACNNNNNNGTC 1 cut(s) 357
DseDI GACNNNNNNGTC 1 cut(s) 357
Eam1104I CTCTTC 6 cut(s) 155, 219, 299, 707, 1374, 1429
EarI CTCTTC 6 cut(s) 155, 219, 299, 707, 1374, 1429
Ecl136II GAGCTC 2 cut(s) 553, 1459
Eco130I CCWWGG 3 cut(s) 383, 419, 1283
Eco24I GRGCYC 3 cut(s) 555, 1072, 1461
Eco31I GGTCTC 4 cut(s) 165, 239, 745, 828
Eco47I GGWCC 1 cut(s) 756
Eco53kI GAGCTC 2 cut(s) 553, 1459
Eco57I CTGAAG 3 cut(s) 243, 870, 1292
Eco91I GGTNACC 1 cut(s) 1288
EcoICRI GAGCTC 2 cut(s) 553, 1459
EcoO65I GGTNACC 1 cut(s) 1288
EcoT14I CCWWGG 3 cut(s) 383, 419, 1283
EcoT38I GRGCYC 3 cut(s) 555, 1072, 1461
ErhI CCWWGG 3 cut(s) 383, 419, 1283
FalI AAGNNNNNCTT 2 cut(s) 868, 900
FaqI GGGAC 1 cut(s) 1316
FbaI TGATCA 1 cut(s) 1170
Fnu4HI GCNGC 3 cut(s) 303, 445, 569
FokI GGATG 2 cut(s) 149, 1350
FriOI GRGCYC 3 cut(s) 555, 1072, 1461
Fsp4HI GCNGC 3 cut(s) 303, 445, 569
FspBI CTAG 7 cut(s) 83, 182, 420, 623, 674, 831, 1284
GluI GCNGC 3 cut(s) 303, 445, 569
GsaI CCCAGC 2 cut(s) 1069, 1100
HaeIII GGCC 4 cut(s) 116, 534, 736, 1180
HapII CCGG 8 cut(s) 218, 328, 353, 531, 572, 737, 754, 1471
HincII GTYRAC 1 cut(s) 1360
HindII GTYRAC 1 cut(s) 1360
HindIII AAGCTT 5 cut(s) 23, 681, 859, 921, 1404
HinfI GANTC 7 cut(s) 5, 90, 414, 515, 827, 879, 1017
HpaII CCGG 8 cut(s) 218, 328, 353, 531, 572, 737, 754, 1471
HphI GGTGA 6 cut(s) 196, 277, 287, 667, 958, 1300
Hpy166II GTNNAC 5 cut(s) 285, 600, 658, 1324, 1360
Hpy188I TCNGA 5 cut(s) 170, 370, 476, 702, 1192
Hpy188III TCNNGA 4 cut(s) 238, 328, 623, 831
Hpy8I GTNNAC 5 cut(s) 285, 600, 658, 1324, 1360
HpyAV CCTTC 4 cut(s) 106, 697, 1139, 1267
HpyCH4III ACNGT 4 cut(s) 245, 359, 458, 480
HpyCH4V TGCA 1 cut(s) 392
HpyF10VI GCNNNNNNNGC 5 cut(s) 733, 867, 1106, 1403, 1451
HpyF3I CTNAG 7 cut(s) 167, 338, 473, 513, 844, 891, 1074
Kpn2I TCCGGA 1 cut(s) 327
Ksp22I TGATCA 1 cut(s) 1170
Kzo9I GATC 2 cut(s) 66, 1170
LguI GCTCTTC 1 cut(s) 1429
LmnI GCTCC 5 cut(s) 318, 339, 490, 1075, 1192
Lsp1109I GCAGC 3 cut(s) 289, 431, 555
LweI GCATC 1 cut(s) 792
MaeI CTAG 7 cut(s) 83, 182, 420, 623, 674, 831, 1284
MaeIII GTNAC 6 cut(s) 59, 124, 275, 397, 1150, 1288
MalI GATC 2 cut(s) 68, 1172
MboI GATC 2 cut(s) 66, 1170
MhlI GDGCHC 4 cut(s) 531, 555, 1072, 1461
MluCI AATT 4 cut(s) 30, 211, 903, 1476
MlyI GAGTC 2 cut(s) 84, 524
MmeI TCCRAC 1 cut(s) 951
MroI TCCGGA 1 cut(s) 327
MroXI GAANNNNTTC 2 cut(s) 662, 883
MseI TTAA 3 cut(s) 209, 636, 1495
MslI CAYNNNNRTG 2 cut(s) 944, 1434
MspA1I CMGCKG 2 cut(s) 1100, 1157
MspI CCGG 8 cut(s) 218, 328, 353, 531, 572, 737, 754, 1471
MspR9I CCNGG 2 cut(s) 218, 531
MwoI GCNNNNNNNGC 5 cut(s) 733, 867, 1106, 1403, 1451
NciI CCSGG 2 cut(s) 218, 531
NdeII GATC 2 cut(s) 66, 1170
NlaIV GGNNCC 3 cut(s) 1071, 1266, 1281
NmeAIII GCCGAG 1 cut(s) 1480
NmuCI GTSAC 6 cut(s) 59, 124, 275, 397, 1150, 1288
NspI RCATGY 2 cut(s) 283, 874
NspV TTCGAA 1 cut(s) 1020
PaeI GCATGC 1 cut(s) 874
PciI ACATGT 1 cut(s) 279
PciSI GCTCTTC 1 cut(s) 1429
PcsI WCGNNNNNNNCGW 1 cut(s) 771
PdmI GAANNNNTTC 2 cut(s) 662, 883
PfeI GAWTC 5 cut(s) 5, 414, 827, 879, 1017
PflFI GACNNNGTC 1 cut(s) 770
PflMI CCANNNNNTGG 1 cut(s) 1103
PkrI GCNGC 3 cut(s) 304, 446, 570
PleI GAGTC 2 cut(s) 84, 523
PpsI GAGTC 2 cut(s) 84, 523
PscI ACATGT 1 cut(s) 279
Psp124BI GAGCTC 2 cut(s) 555, 1461
PspEI GGTNACC 1 cut(s) 1288
PspFI CCCAGC 2 cut(s) 1065, 1096
PspN4I GGNNCC 3 cut(s) 1071, 1266, 1281
PspPI GGNCC 2 cut(s) 734, 756
PsrI GAACNNNNNNTAC 2 cut(s) 650, 682
PsyI GACNNNGTC 1 cut(s) 770
PvuII CAGCTG 2 cut(s) 1100, 1157
RsaI GTAC 1 cut(s) 749
RsaNI GTAC 1 cut(s) 748
RseI CAYNNNNRTG 2 cut(s) 944, 1434
SacI GAGCTC 2 cut(s) 555, 1461
SapI GCTCTTC 1 cut(s) 1429
SaqAI TTAA 3 cut(s) 209, 636, 1495
SatI GCNGC 3 cut(s) 303, 445, 569
Sau3AI GATC 2 cut(s) 66, 1170
Sau96I GGNCC 2 cut(s) 734, 756
SchI GAGTC 2 cut(s) 84, 524
ScrFI CCNGG 2 cut(s) 218, 531
SduI GDGCHC 4 cut(s) 531, 555, 1072, 1461
SfaNI GCATC 1 cut(s) 792
SfuI TTCGAA 1 cut(s) 1020
SinI GGWCC 1 cut(s) 756
SmiMI CAYNNNNRTG 2 cut(s) 944, 1434
SmlI CTYRAG 2 cut(s) 9, 1460
SmoI CTYRAG 2 cut(s) 9, 1460
SphI GCATGC 1 cut(s) 874
Sse9I AATT 4 cut(s) 30, 211, 903, 1476
SspMI CTAG 7 cut(s) 83, 182, 420, 623, 674, 831, 1284
SstI GAGCTC 2 cut(s) 555, 1461
StyD4I CCNGG 2 cut(s) 216, 529
StyI CCWWGG 3 cut(s) 383, 419, 1283
TaaI ACNGT 4 cut(s) 245, 359, 458, 480
TaqI TCGA 5 cut(s) 549, 765, 774, 1020, 1040
TasI AATT 4 cut(s) 30, 211, 903, 1476
TatI WGTACW 1 cut(s) 747
TfiI GAWTC 5 cut(s) 5, 414, 827, 879, 1017
Tru1I TTAA 3 cut(s) 209, 636, 1495
Tru9I TTAA 3 cut(s) 209, 636, 1495
TscAI CASTG 2 cut(s) 461, 1275
TseFI GTSAC 6 cut(s) 59, 124, 275, 397, 1150, 1288
TseI GCWGC 3 cut(s) 302, 444, 568
Tsp45I GTSAC 6 cut(s) 59, 124, 275, 397, 1150, 1288
TspRI CASTG 2 cut(s) 461, 1275
Tth111I GACNNNGTC 1 cut(s) 770
Van91I CCANNNNNTGG 1 cut(s) 1103
VpaK11BI GGWCC 1 cut(s) 756
XapI RAATTY 2 cut(s) 30, 211
XbaI TCTAGA 2 cut(s) 622, 830
XceI RCATGY 2 cut(s) 283, 874
XcmI CCANNNNNNNNNTGG 2 cut(s) 295, 1173
XmaJI CCTAGG 2 cut(s) 419, 1283
XmnI GAANNNNTTC 2 cut(s) 662, 883
XspI CTAG 7 cut(s) 83, 182, 420, 623, 674, 831, 1284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.