MD05G1085600.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0007482
Physical Location & Seq
Forward (+)
17907338 .. 17908786
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1085600.v1.1.491

Sequence Viewer

Length: 1449 bp
ATGGCTTCTTCAGAAACTCCAGTCGTCATGTACTTCTTCCCATTTGTAGGCGGAGGCCACCAGATTCCTATGATCGACATGGCCAGAGTCTTCTCCTCCCATGGAGCCAAAGTCACAATCCTAAGCACCACTCCCGCCGACGCCCTCCGCTTCCGAAACTCCATCCGCCGCGATCAAACCCTCAACCGCTCAATCACCATCCACGTCCTCAAGCTCCCAGGCGACGACGCCTCGGCCGACTCTTCCATGACCTCAGCCCCCCTCACTGACACCTCAGTCCTCCAAGAATCCCTCAGGCAATTCATCACCCTAAACCTACCCAATTGCATCGTAATCGACGTCTTCCACCGTTGGGCGGCACAAGTCATCGACGAGCTTTTCATCAAACGGGTGGTGTTCAATGGAAACGGGTTATTCTCCCGCTGCGTCAGTGAGTGTATCGGCCGATTCGCGCCGCATCAGAATGTGGGTTCTGATTGCGAGCCATTTCTAGTGCCGAACTTGCCCGATCGGATCGAATTGACGAAATCTCAGCTGCCTTCTTTCGCAAGAAACAGGCCAGGGCTTCCTGATAAGGTGGGAAAAGTAGAGGAGAAGAGTTTTGGGGTTGTGGTGAACAGTTTTTACGAATTGGAGTCGAAATATGTGGAGTATTTCACGACTGAGTTGGGGAAGAAGGCATGGCCGATCGGCCCGGTTTCGCTATACAACCGAAGCAACGACGATAAGACTGACAGAGGCCAAGCAGCCTTGGTCGATGAGCAGAGCCTCCTGCATTGTCTGAATTGGTTGGATTCCAAGGAACCTGATTCGGTGGTTTATATCAGTTTTGGGAGCTTGGCTCGGTTGTCTGCAGCCCAACTCGTCGAAATCGCACATGGGATTGAATCTTCGGGGCATAATTTCGTTTGGGTAATCGGAAAAATCTTCAGAGCGGTGGAGGACGGTGGTTATGTGGGAGACAAAGAGGATTGGATTCCGGCGGGATTTGCAGAGAGAATGTGGGAAATGAAGAGAGGGGTTGTGATAGGGGGGTGGGCCCCGCAGATTCTGATACTGGAGCACTGCGCTGTTGGCGGGTTTGTGAGCCACTGCGGGTGGAACTCGACATTGGAGAGCGTGAGCGCAGGGGTGCCCATGGTGACTTGGCCATTGTCGGCGGAGCAGTTCTACAATGAGAAGCTGATAACTGATGTGTTGGGCATTGGGGTGCAAGTGGGGAGTAGGGAATGGGAGTCGTGGAATGTGGAGAGGAAGGAACTGGTGAGGAGAGAGAAGGTGGATGCGGCGGTGAGAAGGATGATGGGCGGCAGTGATGAGGCGGCGGAAATGAAGAAGAGAGCGAGAGCGCTTTCAGAGAAGGCGAAGAGAGCTGTGGAAGAAGGTGGGTCTTCATATGTAGGGGTGGATGCTCTGATTTTAGAGATCAGATTATCGAGGAAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

483

Amino Acids

53.5

Weight (kDa)

6.0

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 270 - 408 4.2e-16 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 275
AatII GACGTC 1 cut(s) 342
AccB1I GGYRCC 1 cut(s) 1132
AccBSI CCGCTC 2 cut(s) 189, 935
AccII CGCG 2 cut(s) 171, 452
AclWI GGATC 1 cut(s) 521
AcoI YGGCCR 5 cut(s) 81, 234, 442, 683, 1148
AcuI CTGAAG 1 cut(s) 913
AcyI GRCGYC 3 cut(s) 141, 228, 339
AfaI GTAC 1 cut(s) 32
AfeI AGCGCT 1 cut(s) 1350
AfiI CCNNNNNNNGG 3 cut(s) 47, 352, 355
AgsI TTSAA 2 cut(s) 400, 887
AjiI CACGTC 1 cut(s) 205
AjnI CCWGG 2 cut(s) 217, 559
AjuI GAANNNNNNNTTGG 2 cut(s) 1094, 1126
AluBI AGCT 6 cut(s) 214, 376, 535, 837, 1183, 1373
AluI AGCT 6 cut(s) 214, 376, 535, 837, 1183, 1373
Alw21I GWGCWC 1 cut(s) 1065
Alw26I GTCTC 1 cut(s) 954
AlwI GGATC 1 cut(s) 521
AlwNI CAGNNNCTG 1 cut(s) 1051
Aor51HI AGCGCT 1 cut(s) 1350
ApaI GGGCCC 1 cut(s) 1042
ApeKI GCWGC 4 cut(s) 423, 535, 746, 854
AspLEI GCGC 4 cut(s) 454, 1070, 1127, 1351
AspS9I GGNCC 3 cut(s) 692, 1038, 1039
AsuC2I CCSGG 1 cut(s) 695
AsuHPI GGTGA 6 cut(s) 187, 298, 625, 1153, 1276, 1303
AxyI CCTNAGG 1 cut(s) 293
BaeGI GKGCMC 2 cut(s) 1042, 1137
BalI TGGCCA 2 cut(s) 83, 1150
BanI GGYRCC 1 cut(s) 1132
BanII GRGCYC 1 cut(s) 1042
BbsI GAAGAC 3 cut(s) 82, 334, 1383
Bbv12I GWGCWC 1 cut(s) 1065
BbvCI CCTCAGC 1 cut(s) 253
BbvI GCAGC 4 cut(s) 410, 522, 758, 866
BccI CCATC 3 cut(s) 170, 206, 1297
BcgI CGANNNNNNTGC 2 cut(s) 316, 350
BciT130I CCWGG 2 cut(s) 219, 561
BcnI CCSGG 1 cut(s) 695
BcoDI GTCTC 1 cut(s) 954
BfaI CTAG 1 cut(s) 491
BfmI CTRYAG 1 cut(s) 852
BfoI RGCGCY 1 cut(s) 1352
Bme1390I CCNGG 3 cut(s) 219, 561, 695
BmgBI CACGTC 1 cut(s) 205
BmgT120I GGNCC 3 cut(s) 692, 1038, 1039
BmiI GGNNCC 5 cut(s) 106, 804, 1040, 1041, 1134
BmrFI CCNGG 3 cut(s) 219, 561, 695
BmsI GCATC 4 cut(s) 336, 466, 1273, 1399
BpiI GAAGAC 3 cut(s) 82, 334, 1383
BplI GAGNNNNNCTC 2 cut(s) 826, 858
BpmI CTGGAG 1 cut(s) 1079
Bpu10I CCTNAGC 2 cut(s) 122, 253
BpuEI CTTGAG 1 cut(s) 194
BpuMI CCSGG 1 cut(s) 695
BsaHI GRCGYC 3 cut(s) 141, 228, 339
BsaJI CCNNGG 7 cut(s) 100, 217, 231, 560, 750, 798, 1137
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 3 cut(s) 47, 352, 355
Bse1I ACTGG 3 cut(s) 20, 1062, 1266
Bse21I CCTNAGG 1 cut(s) 293
BseBI CCWGG 2 cut(s) 219, 561
BseDI CCNNGG 7 cut(s) 100, 217, 231, 560, 750, 798, 1137
BseGI GGATG 5 cut(s) 162, 198, 1288, 1305, 1414
BseLI CCNNNNNNNGG 3 cut(s) 47, 352, 355
BseMII CTCAG 5 cut(s) 267, 288, 307, 545, 654
BseNI ACTGG 3 cut(s) 20, 1062, 1266
BseRI GAGGAG 3 cut(s) 85, 605, 1282
BseSI GKGCMC 2 cut(s) 1042, 1137
BseX3I CGGCCG 2 cut(s) 234, 442
BseXI GCAGC 4 cut(s) 410, 522, 758, 866
Bsh1236I CGCG 2 cut(s) 171, 452
Bsh1285I CGRYCG 4 cut(s) 237, 445, 511, 690
BshNI GGYRCC 1 cut(s) 1132
BsiEI CGRYCG 4 cut(s) 237, 445, 511, 690
BsiHKAI GWGCWC 1 cut(s) 1065
BsiSI CCGG 2 cut(s) 695, 980
BslI CCNNNNNNNGG 3 cut(s) 47, 352, 355
BsmAI GTCTC 1 cut(s) 954
Bsp120I GGGCCC 1 cut(s) 1038
Bsp1286I GDGCHC 3 cut(s) 1042, 1065, 1137
Bsp143I GATC 6 cut(s) 72, 172, 508, 513, 687, 1425
Bsp19I CCATGG 2 cut(s) 100, 1137
BspCNI CTCAG 5 cut(s) 266, 287, 306, 544, 655
BspFNI CGCG 2 cut(s) 171, 452
BspLI GGNNCC 5 cut(s) 106, 804, 1040, 1041, 1134
BspMAI CTGCAG 1 cut(s) 856
BspPI GGATC 1 cut(s) 521
BspT107I GGYRCC 1 cut(s) 1132
BsrBI CCGCTC 2 cut(s) 189, 935
BsrI ACTGG 3 cut(s) 20, 1062, 1266
BssECI CCNNGG 7 cut(s) 100, 217, 231, 560, 750, 798, 1137
BssMI GATC 6 cut(s) 72, 172, 508, 513, 687, 1425
BssNI GRCGYC 3 cut(s) 141, 228, 339
BssT1I CCWWGG 4 cut(s) 100, 750, 798, 1137
Bst2UI CCWGG 2 cut(s) 219, 561
Bst4CI ACNGT 3 cut(s) 350, 620, 947
Bst6I CTCTTC 5 cut(s) 247, 590, 1007, 1331, 1361
BstACI GRCGYC 3 cut(s) 141, 228, 339
BstC8I GCNNGC 1 cut(s) 482
BstDEI CTNAG 6 cut(s) 122, 253, 274, 293, 531, 663
BstDSI CCRYGG 2 cut(s) 100, 1137
BstF5I GGATG 5 cut(s) 162, 198, 1288, 1305, 1414
BstFNI CGCG 2 cut(s) 171, 452
BstH2I RGCGCY 1 cut(s) 1352
BstHHI GCGC 4 cut(s) 454, 1070, 1127, 1351
BstKTI GATC 6 cut(s) 75, 175, 511, 516, 690, 1428
BstMAI GTCTC 1 cut(s) 954
BstMBI GATC 6 cut(s) 72, 172, 508, 513, 687, 1425
BstMCI CGRYCG 4 cut(s) 237, 445, 511, 690
BstMWI GCNNNNNNNGC 4 cut(s) 502, 989, 1074, 1370
BstNI CCWGG 2 cut(s) 219, 561
BstSCI CCNGG 3 cut(s) 217, 559, 693
BstSFI CTRYAG 1 cut(s) 852
BstSLI GKGCMC 2 cut(s) 1042, 1137
BstUI CGCG 2 cut(s) 171, 452
BstV1I GCAGC 4 cut(s) 410, 522, 758, 866
BstV2I GAAGAC 3 cut(s) 82, 334, 1383
BstZI CGGCCG 2 cut(s) 234, 442
Bsu36I CCTNAGG 1 cut(s) 293
BtgI CCRYGG 2 cut(s) 100, 1137
BtrI CACGTC 1 cut(s) 205
BtsCI GGATG 5 cut(s) 162, 198, 1288, 1305, 1414
BtsI GCAGTG 3 cut(s) 1063, 1090, 1318
BtsIMutI CAGTG 5 cut(s) 264, 436, 1063, 1090, 1318
Cac8I GCNNGC 1 cut(s) 482
CaiI CAGNNNCTG 1 cut(s) 1051
CfoI GCGC 4 cut(s) 454, 1070, 1127, 1351
Cfr13I GGNCC 3 cut(s) 692, 1038, 1039
CseI GACGC 3 cut(s) 149, 236, 415
Csp6I GTAC 1 cut(s) 31
CviAII CATG 7 cut(s) 28, 79, 101, 247, 681, 878, 1138
CviQI GTAC 1 cut(s) 31
DdeI CTNAG 6 cut(s) 122, 253, 274, 293, 531, 663
DpnI GATC 6 cut(s) 74, 174, 510, 515, 689, 1427
DpnII GATC 6 cut(s) 72, 172, 508, 513, 687, 1425
DrdI GACNNNNNNGTC 1 cut(s) 275
DseDI GACNNNNNNGTC 1 cut(s) 275
EaeI YGGCCR 5 cut(s) 81, 234, 442, 683, 1148
EagI CGGCCG 2 cut(s) 234, 442
Eam1104I CTCTTC 5 cut(s) 247, 590, 1007, 1331, 1361
EarI CTCTTC 5 cut(s) 247, 590, 1007, 1331, 1361
EciI GGCGGA 4 cut(s) 66, 155, 1175, 1340
EclXI CGGCCG 2 cut(s) 234, 442
Eco130I CCWWGG 4 cut(s) 100, 750, 798, 1137
Eco24I GRGCYC 1 cut(s) 1042
Eco47III AGCGCT 1 cut(s) 1350
Eco52I CGGCCG 2 cut(s) 234, 442
Eco57I CTGAAG 1 cut(s) 913
Eco81I CCTNAGG 1 cut(s) 293
EcoO109I RGGNCCY 1 cut(s) 1039
EcoRII CCWGG 2 cut(s) 217, 559
EcoT14I CCWWGG 4 cut(s) 100, 750, 798, 1137
EcoT38I GRGCYC 1 cut(s) 1042
ErhI CCWWGG 4 cut(s) 100, 750, 798, 1137
FaeI CATG 7 cut(s) 31, 82, 104, 250, 684, 881, 1141
FatI CATG 7 cut(s) 27, 78, 100, 246, 680, 877, 1137
FauI CCCGC 6 cut(s) 142, 428, 976, 1050, 1070, 1088
FauNDI CATATG 1 cut(s) 1396
FokI GGATG 5 cut(s) 149, 185, 1295, 1312, 1421
FriOI GRGCYC 1 cut(s) 1042
FspBI CTAG 1 cut(s) 491
GlaI GCGC 4 cut(s) 453, 1069, 1126, 1350
GsuI CTGGAG 1 cut(s) 1079
HaeII RGCGCY 1 cut(s) 1352
HapII CCGG 2 cut(s) 695, 980
HgaI GACGC 3 cut(s) 149, 236, 415
HhaI GCGC 4 cut(s) 454, 1070, 1127, 1351
Hin1I GRCGYC 3 cut(s) 141, 228, 339
Hin1II CATG 7 cut(s) 31, 82, 104, 250, 684, 881, 1141
Hin6I GCGC 4 cut(s) 452, 1068, 1125, 1349
HinP1I GCGC 4 cut(s) 452, 1068, 1125, 1349
HpaII CCGG 2 cut(s) 695, 980
HphI GGTGA 6 cut(s) 187, 298, 625, 1153, 1276, 1303
Hpy166II GTNNAC 1 cut(s) 616
Hpy188III TCNNGA 2 cut(s) 569, 658
Hpy8I GTNNAC 1 cut(s) 616
Hpy99I CGWCG 7 cut(s) 143, 227, 230, 341, 374, 725, 869
HpyAV CCTTC 7 cut(s) 549, 670, 1249, 1270, 1290, 1354, 1376
HpyCH4III ACNGT 3 cut(s) 350, 620, 947
HpyCH4IV ACGT 2 cut(s) 204, 339
HpyCH4V TGCA 5 cut(s) 327, 775, 854, 992, 1213
HpyF10VI GCNNNNNNNGC 4 cut(s) 502, 989, 1074, 1370
HpyF3I CTNAG 6 cut(s) 122, 253, 274, 293, 531, 663
HpySE526I ACGT 2 cut(s) 204, 339
Hsp92I GRCGYC 3 cut(s) 141, 228, 339
Hsp92II CATG 7 cut(s) 31, 82, 104, 250, 684, 881, 1141
HspAI GCGC 4 cut(s) 452, 1068, 1125, 1349
Kzo9I GATC 6 cut(s) 72, 172, 508, 513, 687, 1425
LmnI GCTCC 5 cut(s) 104, 219, 834, 1060, 1162
Lsp1109I GCAGC 4 cut(s) 410, 522, 758, 866
LweI GCATC 4 cut(s) 336, 466, 1273, 1399
MaeI CTAG 1 cut(s) 491
MaeII ACGT 2 cut(s) 204, 339
MaeIII GTNAC 2 cut(s) 112, 1141
MalI GATC 6 cut(s) 74, 174, 510, 515, 689, 1427
MbiI CCGCTC 2 cut(s) 189, 935
MboI GATC 6 cut(s) 72, 172, 508, 513, 687, 1425
MfeI CAATTG 1 cut(s) 322
MhlI GDGCHC 3 cut(s) 1042, 1065, 1137
MlsI TGGCCA 2 cut(s) 83, 1150
MluCI AATT 7 cut(s) 299, 322, 518, 629, 784, 901, 1444
MluNI TGGCCA 2 cut(s) 83, 1150
MlyI GAGTC 4 cut(s) 96, 233, 644, 1244
MmeI TCCRAC 1 cut(s) 771
Mox20I TGGCCA 2 cut(s) 83, 1150
MscI TGGCCA 2 cut(s) 83, 1150
MslI CAYNNNNRTG 2 cut(s) 462, 1208
Msp20I TGGCCA 2 cut(s) 83, 1150
MspA1I CMGCKG 2 cut(s) 423, 535
MspI CCGG 2 cut(s) 695, 980
MspR9I CCNGG 3 cut(s) 219, 561, 695
MunI CAATTG 1 cut(s) 322
MvaI CCWGG 2 cut(s) 219, 561
MvnI CGCG 2 cut(s) 171, 452
MwoI GCNNNNNNNGC 4 cut(s) 502, 989, 1074, 1370
NciI CCSGG 1 cut(s) 695
NcoI CCATGG 2 cut(s) 100, 1137
NdeI CATATG 1 cut(s) 1396
NdeII GATC 6 cut(s) 72, 172, 508, 513, 687, 1425
NlaIII CATG 7 cut(s) 31, 82, 104, 250, 684, 881, 1141
NlaIV GGNNCC 5 cut(s) 106, 804, 1040, 1041, 1134
NmeAIII GCCGAG 1 cut(s) 212
NmuCI GTSAC 2 cut(s) 112, 1141
PcsI WCGNNNNNNNCGW 2 cut(s) 234, 336
PfeI GAWTC 8 cut(s) 64, 287, 447, 794, 809, 887, 976, 1048
Ple19I CGATCG 2 cut(s) 511, 690
PleI GAGTC 4 cut(s) 95, 233, 643, 1243
PpsI GAGTC 4 cut(s) 95, 233, 643, 1243
Psp6I CCWGG 2 cut(s) 217, 559
PspGI CCWGG 2 cut(s) 217, 559
PspN4I GGNNCC 5 cut(s) 106, 804, 1040, 1041, 1134
PspOMI GGGCCC 1 cut(s) 1038
PspPI GGNCC 3 cut(s) 692, 1038, 1039
PsrI GAACNNNNNNTAC 2 cut(s) 608, 640
PstI CTGCAG 1 cut(s) 856
PstNI CAGNNNCTG 1 cut(s) 1051
PvuI CGATCG 2 cut(s) 511, 690
PvuII CAGCTG 1 cut(s) 535
RsaI GTAC 1 cut(s) 32
RsaNI GTAC 1 cut(s) 31
RseI CAYNNNNRTG 2 cut(s) 462, 1208
Sau3AI GATC 6 cut(s) 72, 172, 508, 513, 687, 1425
Sau96I GGNCC 3 cut(s) 692, 1038, 1039
SchI GAGTC 4 cut(s) 96, 233, 644, 1244
ScrFI CCNGG 3 cut(s) 219, 561, 695
SduI GDGCHC 3 cut(s) 1042, 1065, 1137
SfaNI GCATC 4 cut(s) 336, 466, 1273, 1399
SfcI CTRYAG 1 cut(s) 852
SmiMI CAYNNNNRTG 2 cut(s) 462, 1208
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 7 cut(s) 299, 322, 518, 629, 784, 901, 1444
SspMI CTAG 1 cut(s) 491
StyD4I CCNGG 3 cut(s) 217, 559, 693
StyI CCWWGG 4 cut(s) 100, 750, 798, 1137
TaaI ACNGT 3 cut(s) 350, 620, 947
TaiI ACGT 2 cut(s) 207, 342
TaqI TCGA 9 cut(s) 75, 336, 369, 516, 638, 756, 867, 1106, 1436
TasI AATT 7 cut(s) 299, 322, 518, 629, 784, 901, 1444
TatI WGTACW 1 cut(s) 30
TauI GCSGC 6 cut(s) 171, 359, 457, 1289, 1311, 1325
TfiI GAWTC 8 cut(s) 64, 287, 447, 794, 809, 887, 976, 1048
TscAI CASTG 5 cut(s) 271, 436, 1070, 1097, 1318
TseFI GTSAC 2 cut(s) 112, 1141
TseI GCWGC 4 cut(s) 423, 535, 746, 854
Tsp45I GTSAC 2 cut(s) 112, 1141
TspDTI ATGAA 5 cut(s) 292, 370, 1025, 1346, 1383
TspRI CASTG 5 cut(s) 271, 436, 1070, 1097, 1318
XspI CTAG 1 cut(s) 491
ZraI GACGTC 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.