Rh6BG074800

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0007482
Physical Location & Seq
Reverse (-)
11502481 .. 11549795
47315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG074800.1

Sequence Viewer

Length: 1437 bp
ATGGATTCAGAACCTCCAGTTGAAATGTACTTCTTCCCCTTCGTCGGCGGCGGCCACCAAATCCCGATGATCGACACCGCCCGAGTCTTCGCCAGCCACGGCGCCAAGTCCACCATCCTCTCCACCACTCTCTCCAACGCCCTCCGCTTCCGCAACTCCATCCACCGCGACCAAACCCTCAACCGCCGAATCACCATCCACGTCCTCGACCTCCCAAACGACGCCGCTCCCCCCGACACCTCCATGTCCGCCGCCCCCTTCACCGACACCTCCGTCTTCCAACAGCCCCTCAAGCAATTCCTCACCCAATACCCTCCCGACTGCATCGTCATCGACATCTTCCACCGCTGGGCCTCTGACCTCATCGACTCCCTCGGAATCAGGAGGATCGTCTTCAACGGAAATGGGTTCTTCTCCCGCTGCGTCATGCACAATGTCAGCCGATTTCGGCCGCACGAGAAACTGGGTTCCGATTCGGAGCCGTTTGTGGTGCCGGGTCTGCCTGATCGGGTCGAGCTGACGAAATCCCAGATGCCCATTTTCTCCAGAAACAAATCTGGGCCTGATAAGTTTGGGCAATTGGAGGATAAGAGCTTCGGGGTTGTGGTGAATAGCTTCTATGAATTGGAGTCCAAATATGCTGACTTTTTCAAGAAGGAATTGGGGAAGAAGGCGTGGGGGATCGGCCCGGTTTCGCTATGCAACAGAGACGAAGCTGATAAATCTGAGAGGGGACAAGCTGCTTCTGTTGATGAGGAGAACATGAAGTGGTGTTTGAATTGGTTGGATTCTCAAGAACCTAACTCGGTTGTGTACATTAGTTTCGGAAGCTTGGCTCGATTGTCTTATAAGCAACTGATTGAGATCGCTCATGGGCTTGAGAATTCTAAGCAGGGTTTTGTCTGGGTTATTGGGAAAGTGTTTACATCTGAGAATGAGAATCATGAAGATGAGGAAAATTGGCTTGTGGGTTTTGAGAAGAGAATGAGGGAGAGTCAAAGAGGGGTTGTGATAAGGGGATGGGCTCCTCAGATACTGATGCTGGAGCATAAGTCTGTAGGTGGGTTTGTGAGTCACTGTGGGTGGAACTCGACACTGGAGAGTGTCTGCGCCGGTGTGCCGATGATCACGTGGCCGCTCTCGGCGGAGCAGTTCTCGAATGAGAAGCTGATTACTGATTTGTTGGGGATTGGTGTTCAGGTTGGGAGCAAAGAGTGGGCGTCGTGGAATATGGAGAGGAAGGAGTTGATTGGGAGAGAGAAGGTGGAAGTTGCGGTGAGGAGGGTGGTGGGTGGTGGAGATGAGGCGGTGGAGATGAGGAAGAGAGCCAGAGATCTTGCGGAGAAGGCCAAAAGAGCTGTTGAAGAAGGTGGGTCATCATATGCAGAAGTGGATGCTCTGATTTCAGAGCTCAAGTCACTGAAGAAGAAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

478

Amino Acids

53.77

Weight (kDa)

6.18

Isoelectric Point (pI)

39.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 264 - 407 1.3e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 849
AasI GACNNNNNNGTC 2 cut(s) 272, 326
AccB1I GGYRCC 2 cut(s) 101, 490
AccBSI CCGCTC 2 cut(s) 227, 1138
AccII CGCG 1 cut(s) 168
AclWI GGATC 2 cut(s) 395, 689
AcoI YGGCCR 3 cut(s) 52, 449, 1133
AcsI RAATTY 1 cut(s) 883
AcvI CACGTG 1 cut(s) 1131
AcyI GRCGYC 3 cut(s) 102, 222, 1220
AfaI GTAC 2 cut(s) 29, 815
AfiI CCNNNNNNNGG 2 cut(s) 44, 349
AgsI TTSAA 5 cut(s) 23, 397, 652, 778, 1364
AjiI CACGTC 1 cut(s) 202
AluBI AGCT 9 cut(s) 517, 594, 615, 716, 740, 831, 1168, 1358, 1411
AluI AGCT 9 cut(s) 517, 594, 615, 716, 740, 831, 1168, 1358, 1411
Alw21I GWGCWC 1 cut(s) 1413
Alw26I GTCTC 1 cut(s) 702
AlwI GGATC 2 cut(s) 395, 689
AlwNI CAGNNNCTG 1 cut(s) 1036
Ama87I CYCGRG 1 cut(s) 81
AoxI GGCC 7 cut(s) 52, 351, 449, 560, 685, 1133, 1347
ApeKI GCWGC 2 cut(s) 420, 740
ApoI RAATTY 1 cut(s) 883
Asp700I GAANNNNTTC 1 cut(s) 614
AspLEI GCGC 2 cut(s) 104, 1112
AspS9I GGNCC 3 cut(s) 351, 560, 686
AsuC2I CCSGG 2 cut(s) 495, 689
AsuHPI GGTGA 5 cut(s) 184, 253, 295, 619, 1288
AvaI CYCGRG 1 cut(s) 81
BanI GGYRCC 2 cut(s) 101, 490
BanII GRGCYC 2 cut(s) 1027, 1413
BauI CACGAG 1 cut(s) 455
BbrPI CACGTG 1 cut(s) 1131
BbsI GAAGAC 3 cut(s) 79, 268, 385
Bbv12I GWGCWC 1 cut(s) 1413
BbvI GCAGC 2 cut(s) 407, 727
BccI CCATC 4 cut(s) 122, 167, 203, 1014
BceAI ACGGC 2 cut(s) 115, 466
BcgI CGANNNNNNTGC 2 cut(s) 313, 347
BclI TGATCA 1 cut(s) 1125
BcnI CCSGG 2 cut(s) 495, 689
BcoDI GTCTC 1 cut(s) 702
BfmI CTRYAG 1 cut(s) 1056
BfoI RGCGCY 1 cut(s) 105
BglII AGATCT 1 cut(s) 1333
BisI GCNGC 8 cut(s) 49, 52, 225, 252, 421, 452, 741, 1136
BlsI GCNGC 8 cut(s) 50, 53, 226, 253, 422, 453, 742, 1137
Bme1390I CCNGG 2 cut(s) 495, 689
BmeT110I CYCGRG 1 cut(s) 81
BmgBI CACGTC 1 cut(s) 202
BmgT120I GGNCC 3 cut(s) 351, 560, 686
BmiI GGNNCC 5 cut(s) 103, 469, 480, 492, 1026
BmrFI CCNGG 2 cut(s) 495, 689
BmrI ACTGGG 1 cut(s) 473
BmsI GCATC 4 cut(s) 333, 522, 1029, 1384
BmuI ACTGGG 1 cut(s) 473
BpiI GAAGAC 3 cut(s) 79, 268, 385
BplI GAGNNNNNCTC 2 cut(s) 1139, 1171
BpmI CTGGAG 3 cut(s) 529, 1064, 1118
BpuEI CTTGAG 4 cut(s) 275, 777, 899, 1397
BpuMI CCSGG 2 cut(s) 495, 689
BsaAI YACGTR 1 cut(s) 1131
BsaBI GATNNNNATC 1 cut(s) 863
BsaHI GRCGYC 3 cut(s) 102, 222, 1220
BsaJI CCNNGG 2 cut(s) 97, 373
BsaXI ACNNNNNCTCC 2 cut(s) 1037, 1067
Bsc4I CCNNNNNNNGG 2 cut(s) 44, 349
Bse118I RCCGGY 1 cut(s) 1112
Bse1I ACTGG 3 cut(s) 17, 468, 1101
Bse8I GATNNNNATC 1 cut(s) 863
BseDI CCNNGG 2 cut(s) 97, 373
BseGI GGATG 5 cut(s) 114, 159, 195, 1025, 1399
BseJI GATNNNNATC 1 cut(s) 863
BseLI CCNNNNNNNGG 2 cut(s) 44, 349
BseMII CTCAG 3 cut(s) 717, 921, 1043
BseNI ACTGG 3 cut(s) 17, 468, 1101
BseRI GAGGAG 3 cut(s) 770, 1017, 1294
BseX3I CGGCCG 1 cut(s) 449
BseXI GCAGC 2 cut(s) 407, 727
BseYI CCCAGC 1 cut(s) 348
Bsh1236I CGCG 1 cut(s) 168
Bsh1285I CGRYCG 1 cut(s) 452
BshFI GGCC 7 cut(s) 54, 353, 451, 562, 687, 1135, 1349
BshNI GGYRCC 2 cut(s) 101, 490
BsiEI CGRYCG 1 cut(s) 452
BsiHKAI GWGCWC 1 cut(s) 1413
BsiHKCI CYCGRG 1 cut(s) 81
BsiSI CCGG 3 cut(s) 494, 689, 1113
BslFI GGGAC 1 cut(s) 747
BslI CCNNNNNNNGG 2 cut(s) 44, 349
BsmAI GTCTC 1 cut(s) 702
BsmBI CGTCTC 1 cut(s) 702
BsmFI GGGAC 1 cut(s) 747
BsnI GGCC 7 cut(s) 54, 353, 451, 562, 687, 1135, 1349
BsoBI CYCGRG 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 1027, 1413
Bsp1407I TGTACA 1 cut(s) 813
Bsp143I GATC 7 cut(s) 69, 387, 505, 681, 864, 1125, 1333
BspANI GGCC 7 cut(s) 54, 353, 451, 562, 687, 1135, 1349
BspCNI CTCAG 3 cut(s) 718, 922, 1042
BspFNI CGCG 1 cut(s) 168
BspHI TCATGA 1 cut(s) 943
BspLI GGNNCC 5 cut(s) 103, 469, 480, 492, 1026
BspPI GGATC 2 cut(s) 395, 689
BspT107I GGYRCC 2 cut(s) 101, 490
BsrBI CCGCTC 2 cut(s) 227, 1138
BsrFI RCCGGY 1 cut(s) 1112
BsrGI TGTACA 1 cut(s) 813
BsrI ACTGG 3 cut(s) 17, 468, 1101
BssAI RCCGGY 1 cut(s) 1112
BssECI CCNNGG 2 cut(s) 97, 373
BssMI GATC 7 cut(s) 69, 387, 505, 681, 864, 1125, 1333
BssNI GRCGYC 3 cut(s) 102, 222, 1220
BssSI CACGAG 1 cut(s) 455
Bst2BI CACGAG 1 cut(s) 455
Bst4CI ACNGT 1 cut(s) 1079
Bst6I CTCTTC 2 cut(s) 974, 1316
BstACI GRCGYC 3 cut(s) 102, 222, 1220
BstAUI TGTACA 1 cut(s) 813
BstBAI YACGTR 1 cut(s) 1131
BstC8I GCNNGC 1 cut(s) 94
BstDEI CTNAG 4 cut(s) 726, 888, 930, 1029
BstDSI CCRYGG 1 cut(s) 97
BstF5I GGATG 5 cut(s) 114, 159, 195, 1025, 1399
BstFNI CGCG 1 cut(s) 168
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 2 cut(s) 104, 1112
BstKTI GATC 7 cut(s) 72, 390, 508, 684, 867, 1128, 1336
BstMAI GTCTC 1 cut(s) 702
BstMBI GATC 7 cut(s) 69, 387, 505, 681, 864, 1125, 1333
BstMCI CGRYCG 1 cut(s) 452
BstMWI GCNNNNNNNGC 4 cut(s) 292, 499, 1346, 1355
BstSCI CCNGG 2 cut(s) 493, 687
BstSFI CTRYAG 1 cut(s) 1056
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 2 cut(s) 407, 727
BstV2I GAAGAC 3 cut(s) 79, 268, 385
BstX2I RGATCY 1 cut(s) 1333
BstYI RGATCY 1 cut(s) 1333
BstZI CGGCCG 1 cut(s) 449
BsuRI GGCC 7 cut(s) 54, 353, 451, 562, 687, 1135, 1349
BtgI CCRYGG 1 cut(s) 97
BtrI CACGTC 1 cut(s) 202
BtsCI GGATG 5 cut(s) 114, 159, 195, 1025, 1399
BtsIMutI CAGTG 3 cut(s) 1075, 1094, 1418
Cac8I GCNNGC 1 cut(s) 94
CaiI CAGNNNCTG 1 cut(s) 1036
CciI TCATGA 1 cut(s) 943
CfoI GCGC 2 cut(s) 104, 1112
Cfr10I RCCGGY 1 cut(s) 1112
Cfr13I GGNCC 3 cut(s) 351, 560, 686
CseI GACGC 3 cut(s) 230, 412, 1209
Csp6I GTAC 2 cut(s) 28, 814
CviAII CATG 5 cut(s) 244, 427, 763, 872, 944
CviQI GTAC 2 cut(s) 28, 814
DdeI CTNAG 4 cut(s) 726, 888, 930, 1029
DinI GGCGCC 1 cut(s) 103
DpnI GATC 7 cut(s) 71, 389, 507, 683, 866, 1127, 1335
DpnII GATC 7 cut(s) 69, 387, 505, 681, 864, 1125, 1333
DrdI GACNNNNNNGTC 2 cut(s) 272, 326
DseDI GACNNNNNNGTC 2 cut(s) 272, 326
EaeI YGGCCR 3 cut(s) 52, 449, 1133
EagI CGGCCG 1 cut(s) 449
Eam1104I CTCTTC 2 cut(s) 974, 1316
EarI CTCTTC 2 cut(s) 974, 1316
EciI GGCGGA 2 cut(s) 238, 1160
Ecl136II GAGCTC 1 cut(s) 1411
EclXI CGGCCG 1 cut(s) 449
Eco24I GRGCYC 2 cut(s) 1027, 1413
Eco52I CGGCCG 1 cut(s) 449
Eco53kI GAGCTC 1 cut(s) 1411
Eco72I CACGTG 1 cut(s) 1131
Eco88I CYCGRG 1 cut(s) 81
EcoICRI GAGCTC 1 cut(s) 1411
EcoRI GAATTC 1 cut(s) 883
EcoT38I GRGCYC 2 cut(s) 1027, 1413
EgeI GGCGCC 1 cut(s) 103
EheI GGCGCC 1 cut(s) 103
Esp3I CGTCTC 1 cut(s) 702
FaeI CATG 5 cut(s) 247, 430, 766, 875, 947
FaqI GGGAC 1 cut(s) 747
FatI CATG 5 cut(s) 243, 426, 762, 871, 943
FauI CCCGC 1 cut(s) 425
FauNDI CATATG 1 cut(s) 1381
FbaI TGATCA 1 cut(s) 1125
Fnu4HI GCNGC 8 cut(s) 49, 52, 225, 252, 421, 452, 741, 1136
FokI GGATG 5 cut(s) 101, 146, 182, 1032, 1406
FriOI GRGCYC 2 cut(s) 1027, 1413
Fsp4HI GCNGC 8 cut(s) 49, 52, 225, 252, 421, 452, 741, 1136
GlaI GCGC 2 cut(s) 103, 1111
GluI GCNGC 8 cut(s) 49, 52, 225, 252, 421, 452, 741, 1136
GsaI CCCAGC 1 cut(s) 352
GsuI CTGGAG 3 cut(s) 529, 1064, 1118
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 7 cut(s) 54, 353, 451, 562, 687, 1135, 1349
HapII CCGG 3 cut(s) 494, 689, 1113
HgaI GACGC 3 cut(s) 230, 412, 1209
HhaI GCGC 2 cut(s) 104, 1112
Hin1I GRCGYC 3 cut(s) 102, 222, 1220
Hin1II CATG 5 cut(s) 247, 430, 766, 875, 947
Hin6I GCGC 2 cut(s) 102, 1110
HinP1I GCGC 2 cut(s) 102, 1110
HindIII AAGCTT 1 cut(s) 829
HpaII CCGG 3 cut(s) 494, 689, 1113
HphI GGTGA 5 cut(s) 184, 253, 295, 619, 1288
Hpy166II GTNNAC 3 cut(s) 111, 814, 924
Hpy188III TCNNGA 8 cut(s) 64, 317, 382, 546, 652, 794, 944, 1156
Hpy8I GTNNAC 3 cut(s) 111, 814, 924
Hpy99I CGWCG 3 cut(s) 47, 224, 1225
HpyAV CCTTC 8 cut(s) 49, 268, 649, 664, 1234, 1255, 1339, 1361
HpyCH4III ACNGT 1 cut(s) 1079
HpyCH4IV ACGT 2 cut(s) 201, 1130
HpyCH4V TGCA 4 cut(s) 324, 430, 702, 1385
HpyF10VI GCNNNNNNNGC 4 cut(s) 292, 499, 1346, 1355
HpyF3I CTNAG 4 cut(s) 726, 888, 930, 1029
HpySE526I ACGT 2 cut(s) 201, 1130
Hsp92I GRCGYC 3 cut(s) 102, 222, 1220
Hsp92II CATG 5 cut(s) 247, 430, 766, 875, 947
HspAI GCGC 2 cut(s) 102, 1110
KasI GGCGCC 1 cut(s) 101
Ksp22I TGATCA 1 cut(s) 1125
Kzo9I GATC 7 cut(s) 69, 387, 505, 681, 864, 1125, 1333
LmnI GCTCC 6 cut(s) 232, 478, 1030, 1045, 1147, 1206
Lsp1109I GCAGC 2 cut(s) 407, 727
LweI GCATC 4 cut(s) 333, 522, 1029, 1384
MaeII ACGT 2 cut(s) 201, 1130
MaeIII GTNAC 2 cut(s) 1073, 1416
MalI GATC 7 cut(s) 71, 389, 507, 683, 866, 1127, 1335
MbiI CCGCTC 2 cut(s) 227, 1138
MboI GATC 7 cut(s) 69, 387, 505, 681, 864, 1125, 1333
MfeI CAATTG 1 cut(s) 578
MflI RGATCY 1 cut(s) 1333
MhlI GDGCHC 2 cut(s) 1027, 1413
MluCI AATT 8 cut(s) 296, 578, 623, 659, 778, 883, 958, 1432
Mly113I GGCGCC 1 cut(s) 102
MlyI GAGTC 5 cut(s) 93, 362, 638, 1003, 1081
MmeI TCCRAC 3 cut(s) 159, 304, 765
MroXI GAANNNNTTC 1 cut(s) 614
MslI CAYNNNNRTG 2 cut(s) 242, 948
MspA1I CMGCKG 2 cut(s) 348, 420
MspI CCGG 3 cut(s) 494, 689, 1113
MspR9I CCNGG 2 cut(s) 495, 689
MunI CAATTG 1 cut(s) 578
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 4 cut(s) 292, 499, 1346, 1355
NarI GGCGCC 1 cut(s) 102
NciI CCSGG 2 cut(s) 495, 689
NdeI CATATG 1 cut(s) 1381
NdeII GATC 7 cut(s) 69, 387, 505, 681, 864, 1125, 1333
NlaIII CATG 5 cut(s) 247, 430, 766, 875, 947
NlaIV GGNNCC 5 cut(s) 103, 469, 480, 492, 1026
NmeAIII GCCGAG 1 cut(s) 1121
NmuCI GTSAC 2 cut(s) 1073, 1416
PagI TCATGA 1 cut(s) 943
PdmI GAANNNNTTC 1 cut(s) 614
PfeI GAWTC 6 cut(s) 5, 189, 378, 473, 788, 940
PkrI GCNGC 8 cut(s) 50, 53, 226, 253, 422, 453, 742, 1137
PleI GAGTC 5 cut(s) 92, 362, 637, 1002, 1080
PluTI GGCGCC 1 cut(s) 105
PmaCI CACGTG 1 cut(s) 1131
PmlI CACGTG 1 cut(s) 1131
PpsI GAGTC 5 cut(s) 92, 362, 637, 1002, 1080
Ppu21I YACGTR 1 cut(s) 1131
PsiI TTATAA 1 cut(s) 849
Psp124BI GAGCTC 1 cut(s) 1413
PspCI CACGTG 1 cut(s) 1131
PspFI CCCAGC 1 cut(s) 348
PspN4I GGNNCC 5 cut(s) 103, 469, 480, 492, 1026
PspPI GGNCC 3 cut(s) 351, 560, 686
PstNI CAGNNNCTG 1 cut(s) 1036
PsuI RGATCY 1 cut(s) 1333
RsaI GTAC 2 cut(s) 29, 815
RsaNI GTAC 2 cut(s) 28, 814
RseI CAYNNNNRTG 2 cut(s) 242, 948
SacI GAGCTC 1 cut(s) 1413
SatI GCNGC 8 cut(s) 49, 52, 225, 252, 421, 452, 741, 1136
Sau3AI GATC 7 cut(s) 69, 387, 505, 681, 864, 1125, 1333
Sau96I GGNCC 3 cut(s) 351, 560, 686
SchI GAGTC 5 cut(s) 93, 362, 638, 1003, 1081
ScrFI CCNGG 2 cut(s) 495, 689
SduI GDGCHC 2 cut(s) 1027, 1413
SfaNI GCATC 4 cut(s) 333, 522, 1029, 1384
SfcI CTRYAG 1 cut(s) 1056
SfoI GGCGCC 1 cut(s) 103
SgrAI CRCCGGYG 1 cut(s) 1112
SmiMI CAYNNNNRTG 2 cut(s) 242, 948
SmlI CTYRAG 4 cut(s) 290, 792, 878, 1412
SmoI CTYRAG 4 cut(s) 290, 792, 878, 1412
Sse9I AATT 8 cut(s) 296, 578, 623, 659, 778, 883, 958, 1432
SspDI GGCGCC 1 cut(s) 101
SstI GAGCTC 1 cut(s) 1413
StyD4I CCNGG 2 cut(s) 493, 687
TaaI ACNGT 1 cut(s) 1079
TaiI ACGT 2 cut(s) 204, 1133
TaqI TCGA 8 cut(s) 72, 207, 333, 366, 513, 838, 1091, 1157
TasI AATT 8 cut(s) 296, 578, 623, 659, 778, 883, 958, 1432
TatI WGTACW 2 cut(s) 27, 813
TauI GCSGC 6 cut(s) 51, 54, 227, 254, 454, 1138
TfiI GAWTC 6 cut(s) 5, 189, 378, 473, 788, 940
TscAI CASTG 3 cut(s) 1082, 1101, 1425
TseFI GTSAC 2 cut(s) 1073, 1416
TseI GCWGC 2 cut(s) 420, 740
Tsp45I GTSAC 2 cut(s) 1073, 1416
TspDTI ATGAA 3 cut(s) 636, 779, 960
TspGWI ACGGA 2 cut(s) 262, 414
TspRI CASTG 3 cut(s) 1082, 1101, 1425
XapI RAATTY 1 cut(s) 883
XmnI GAANNNNTTC 1 cut(s) 614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.