Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007482

Physical Location & Seq

Genomic Coordinates Forward (+)

15290816 .. 15292697

Gene Structure 1882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G129600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGATTCACAAGCTGAACCCAAACTTGAAATTTTCTTTTTCCCATACATTCTTGGTGGTCACTTGATCCCCATGATAGATTTAGCCAGACTCTTTGCATCTCATGGAGTGAAGGCCACCATTGTCACAACCCCTCACAATGTCCTCCTCTTTCAAAGCCCCATCCTCAGAGACCAAAAATTAGGCTATGATATTGGCTTCCACACTCTGAATTTCCGATCAGAAGAGTTTGGCCTACCAAATGGTTGTGAAAATGAGCTCACAACCACTAATGGTGACATGTTCATCAAGCTCTTCATGGCTGCTATGAAACTTCAAGACCCTCTTGGGAAGCTCCTTTGTGAGATCAGACCAGACTGTCTCGTCTCCGACAGGCTTTATCCTTGGACAGCAGATGTCACTGATGGCCTTGGCATTCCGCGGATTGTGTTCGATGGGAGTGGTTGCTTCTCTCATTGCGTGGAAGAGAGCCTCAGACGCTACGCACCGCATGAGAGAGTTTTATCTGAAACAGAGGCTTTTGTTGTGCCTGGCCTGCCCAACAAGATTGAGCTGAAGAGGTCAATGCTGCCAGATTATGTCAAAGCTGAAAATGGCTTCACTCTGTTCCTCAATGAGGCTCTGGAGGGTGAGATTAAAAGCTATGGGATTGTGGTCAACAGCTTCTATGAGTTGGAACAAGCTTATGCTGATTATTTTCAAAAGGAGATGAAGAGAAAAACATGGCACATAGGGCCAGTCTCATTGCACAACAGAAGCAACATTGACAAAGTTGAAAGAGGTATTAAAACCTCCATTGATGAGCACAGTTGTTTGAATTGGCTTGATTCTAGAGAACCCAACTCTGTTCTTTACATCAGCTTTGGAAGCATGCCAAGGATCACTTCAGCTCAGCTCTTGGAGATTGCTCATGGGCTTGAAGCCTCCAACCACCCTTTCATTTGGGTGATTGGGAGAATTTTAGATTATTCATCCAGAGAGAAGCAACAAGTAGAAAGTGTTCTGCTTCCTGTTGGGTTTGAAGAAAGAGTTACAAAATCAAAAGGAGGGCTCATAATCAGAGGCTGGGCTCCTCAGCTTCTGATTCTAGAACATCCAGCAGTTGGGGCTTATATGAACCATTGTGGATGGAACTCAATCATTGAAGGTGTCACAGCTGGTGTGCCTATGATCACATGGCCTTTCTCCTCTGAGCAATTTTACAATGAGAGATTCATTCTCAATGTAATAAGGGTTGGGATTTCAATGGGAAATGAGCACTGGGTTCCATTGACGGAGCTGCCTAGAGTGACCATCAAGAGTGAGAAAGTAGCCAAAGTTGTGAACAGACTAATGGGCAGTGAAGAAGCTGAAGTTCTGGGCATGAGAAAGAGAGCAGCTGAGTATAGAAACAAAGCCATGAGAGCTTTTGAAGAAGGCGGCTCTTCCTATGCAAATGTTGATGCTTTCATAGCTGAGCTCAAGTCTCGCCGGAAAAATCAAAATGGTCATGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

UDPGT

Protein Analysis

499

Amino Acids

56.33

Weight (kDa)

6.14

Isoelectric Point (pI)

43.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007482)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g05690 FvH4_2g05700
malus_domestica	MD05G1085400.v1.1 MD05G1085600.v1.1
prunus_persica	Prupe.8G129600_v2.0.a1 Prupe.8G129700_v2.0.a1
pyrus_communis	pycom05g08480 pycom05g08490
rosa_chinensis	RchiOBHm_Chr5g0039721 RchiOBHm_Chr6g0256571
rosa_laevigata	RLG00000014758 RLG00000014761
rosa_multiflora	Rmu_sc0000103.1_g000010 Rmu_sc0003012.1_g000017 Rmu_sc0003012.1_g000019 Rmu_ssc0000052.1_g000002
rosa_roxburghii	Rroxscaffold_7G00209220 Rroxscaffold_7G00209230
rosa_rugosa	Rorug05G0181400 Rorug05G0564700 Rorug05G0564700
rosa_samantha	Rh6BG074800 Rh6CG071700
rosa_wichuraiana	Rw6G007400 Rw6G007420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	357, 362
AccB7I	CCANNNNNTGG	1 cut(s)	1103
AccII	CGCG	1 cut(s)	421
AciI	CCGC	4 cut(s)	419, 421, 488, 1419
AclWI	GGATC	2 cut(s)	61, 887
AcsI	RAATTY	3 cut(s)	30, 211, 957
AcuI	CTGAAG	3 cut(s)	575, 870, 1371
AfiI	CCNNNNNNNGG	2 cut(s)	616, 1103
AflIII	ACRYGT	1 cut(s)	279
AjnI	CCWGG	1 cut(s)	529
AjuI	GAANNNNNNNTTGG	4 cut(s)	868, 900, 920, 952
Alw21I	GWGCWC	4 cut(s)	261, 807, 1260, 1461
Alw26I	GTCTC	5 cut(s)	165, 365, 370, 745, 1470
AlwI	GGATC	2 cut(s)	61, 887
AlwNI	CAGNNNCTG	2 cut(s)	1065, 1081
AoxI	GGCC	6 cut(s)	114, 232, 406, 532, 734, 1178
ApeKI	GCWGC	4 cut(s)	302, 568, 1279, 1376
ApoI	RAATTY	3 cut(s)	30, 211, 957
Asp700I	GAANNNNTTC	1 cut(s)	999
AspS9I	GGNCC	1 cut(s)	734
AsuHPI	GGTGA	3 cut(s)	287, 641, 958
BanII	GRGCYC	4 cut(s)	261, 1053, 1072, 1461
Bbv12I	GWGCWC	4 cut(s)	261, 807, 1260, 1461
BbvCI	CCTCAGC	1 cut(s)	1074
BbvI	GCAGC	4 cut(s)	289, 555, 1266, 1388
BccI	CCATC	5 cut(s)	170, 398, 428, 1122, 1301
BciT130I	CCWGG	1 cut(s)	531
BclI	TGATCA	1 cut(s)	1170
BcoDI	GTCTC	5 cut(s)	165, 365, 370, 745, 1470
BfaI	CTAG	3 cut(s)	831, 1088, 1284
BisI	GCNGC	5 cut(s)	303, 569, 1280, 1377, 1420
BlpI	GCTNAGC	2 cut(s)	891, 1455
BlsI	GCNGC	5 cut(s)	304, 570, 1281, 1378, 1421
Bme1390I	CCNGG	1 cut(s)	531
BmgT120I	GGNCC	1 cut(s)	734
BmiI	GGNNCC	2 cut(s)	1071, 1266
BmrFI	CCNGG	1 cut(s)	531
BmrI	ACTGGG	1 cut(s)	1270
BmsI	GCATC	2 cut(s)	107, 1432
BmuI	ACTGGG	1 cut(s)	1270
BpmI	CTGGAG	1 cut(s)	644
Bpu10I	CCTNAGC	1 cut(s)	1074
Bpu1102I	GCTNAGC	2 cut(s)	891, 1455
BpuEI	CTTGAG	1 cut(s)	1445
BsaI	GGTCTC	1 cut(s)	165
BsaJI	CCNNGG	4 cut(s)	383, 409, 419, 875
Bsc4I	CCNNNNNNNGG	2 cut(s)	616, 1103
Bse1I	ACTGG	2 cut(s)	737, 1265
Bse3DI	GCAATG	2 cut(s)	454, 743
BseBI	CCWGG	1 cut(s)	531
BseDI	CCNNGG	4 cut(s)	383, 409, 419, 875
BseGI	GGATG	4 cut(s)	162, 971, 1093, 1133
BseLI	CCNNNNNNNGG	2 cut(s)	616, 1103
BseMI	GCAATG	2 cut(s)	454, 743
BseMII	CTCAG	7 cut(s)	181, 487, 905, 1088, 1182, 1371, 1446
BseNI	ACTGG	2 cut(s)	737, 1265
BseRI	GAGGAG	3 cut(s)	137, 1062, 1177
BseXI	GCAGC	4 cut(s)	289, 555, 1266, 1388
BseYI	CCCAGC	1 cut(s)	1065
Bsh1236I	CGCG	1 cut(s)	421
BshFI	GGCC	6 cut(s)	116, 234, 408, 534, 736, 1180
BsiHKAI	GWGCWC	4 cut(s)	261, 807, 1260, 1461
BsiSI	CCGG	1 cut(s)	1471
BslI	CCNNNNNNNGG	2 cut(s)	616, 1103
BsmAI	GTCTC	5 cut(s)	165, 365, 370, 745, 1470
BsmBI	CGTCTC	1 cut(s)	370
BsmI	GAATGC	1 cut(s)	414
BsnI	GGCC	6 cut(s)	116, 234, 408, 534, 736, 1180
Bso31I	GGTCTC	1 cut(s)	165
Bsp1286I	GDGCHC	6 cut(s)	261, 807, 1053, 1072, 1260, 1461
Bsp143I	GATC	5 cut(s)	66, 218, 345, 879, 1170
Bsp1720I	GCTNAGC	2 cut(s)	891, 1455
BspACI	CCGC	4 cut(s)	419, 421, 488, 1419
BspANI	GGCC	6 cut(s)	116, 234, 408, 534, 736, 1180
BspCNI	CTCAG	7 cut(s)	180, 486, 904, 1087, 1183, 1372, 1447
BspFNI	CGCG	1 cut(s)	421
BspLI	GGNNCC	2 cut(s)	1071, 1266
BspPI	GGATC	2 cut(s)	61, 887
BspQI	GCTCTTC	2 cut(s)	299, 1429
BspTNI	GGTCTC	1 cut(s)	165
BsrDI	GCAATG	2 cut(s)	454, 743
BsrI	ACTGG	2 cut(s)	737, 1265
BssECI	CCNNGG	4 cut(s)	383, 409, 419, 875
BssMI	GATC	5 cut(s)	66, 218, 345, 879, 1170
BssT1I	CCWWGG	3 cut(s)	383, 409, 875
Bst2UI	CCWGG	1 cut(s)	531
Bst4CI	ACNGT	2 cut(s)	359, 809
Bst6I	CTCTTC	6 cut(s)	219, 299, 459, 551, 707, 1429
BstC8I	GCNNGC	2 cut(s)	536, 872
BstDEI	CTNAG	7 cut(s)	167, 473, 891, 1074, 1191, 1380, 1455
BstDSI	CCRYGG	1 cut(s)	419
BstENI	CCTNNNNNAGG	1 cut(s)	614
BstF5I	GGATG	4 cut(s)	162, 971, 1093, 1133
BstFNI	CGCG	1 cut(s)	421
BstKTI	GATC	5 cut(s)	69, 221, 348, 882, 1173
BstMAI	GTCTC	5 cut(s)	165, 365, 370, 745, 1470
BstMBI	GATC	5 cut(s)	66, 218, 345, 879, 1170
BstMWI	GCNNNNNNNGC	7 cut(s)	477, 535, 733, 867, 1106, 1403, 1451
BstNI	CCWGG	1 cut(s)	531
BstNSI	RCATGY	2 cut(s)	283, 874
BstSCI	CCNGG	1 cut(s)	529
BstUI	CGCG	1 cut(s)	421
BstV1I	GCAGC	4 cut(s)	289, 555, 1266, 1388
BsuRI	GGCC	6 cut(s)	116, 234, 408, 534, 736, 1180
BtgI	CCRYGG	1 cut(s)	419
BtsCI	GGATG	4 cut(s)	162, 971, 1093, 1133
BtsI	GCAGTG	1 cut(s)	1345
BtsIMutI	CAGTG	3 cut(s)	399, 1258, 1345
Cac8I	GCNNGC	2 cut(s)	536, 872
CaiI	CAGNNNCTG	2 cut(s)	1065, 1081
Cfr13I	GGNCC	1 cut(s)	734
Cfr42I	CCGCGG	1 cut(s)	422
CseI	GACGC	1 cut(s)	486
DdeI	CTNAG	7 cut(s)	167, 473, 891, 1074, 1191, 1380, 1455
DpnI	GATC	5 cut(s)	68, 220, 347, 881, 1172
DpnII	GATC	5 cut(s)	66, 218, 345, 879, 1170
DrdI	GACNNNNNNGTC	2 cut(s)	357, 362
DseDI	GACNNNNNNGTC	2 cut(s)	357, 362
Eam1104I	CTCTTC	6 cut(s)	219, 299, 459, 551, 707, 1429
EarI	CTCTTC	6 cut(s)	219, 299, 459, 551, 707, 1429
Ecl136II	GAGCTC	2 cut(s)	259, 1459
Eco130I	CCWWGG	3 cut(s)	383, 409, 875
Eco24I	GRGCYC	4 cut(s)	261, 1053, 1072, 1461
Eco31I	GGTCTC	1 cut(s)	165
Eco53kI	GAGCTC	2 cut(s)	259, 1459
Eco57I	CTGAAG	3 cut(s)	575, 870, 1371
EcoICRI	GAGCTC	2 cut(s)	259, 1459
EcoNI	CCTNNNNNAGG	1 cut(s)	614
EcoRII	CCWGG	1 cut(s)	529
EcoT14I	CCWWGG	3 cut(s)	383, 409, 875
EcoT38I	GRGCYC	4 cut(s)	261, 1053, 1072, 1461
ErhI	CCWWGG	3 cut(s)	383, 409, 875
Esp3I	CGTCTC	1 cut(s)	370
FalI	AAGNNNNNCTT	4 cut(s)	309, 341, 868, 900
FbaI	TGATCA	1 cut(s)	1170
Fnu4HI	GCNGC	5 cut(s)	303, 569, 1280, 1377, 1420
FokI	GGATG	4 cut(s)	149, 958, 1080, 1140
FriOI	GRGCYC	4 cut(s)	261, 1053, 1072, 1461
Fsp4HI	GCNGC	5 cut(s)	303, 569, 1280, 1377, 1420
FspBI	CTAG	3 cut(s)	831, 1088, 1284
GluI	GCNGC	5 cut(s)	303, 569, 1280, 1377, 1420
GsaI	CCCAGC	1 cut(s)	1069
GsuI	CTGGAG	1 cut(s)	644
HaeIII	GGCC	6 cut(s)	116, 234, 408, 534, 736, 1180
HapII	CCGG	1 cut(s)	1471
HgaI	GACGC	1 cut(s)	486
HincII	GTYRAC	1 cut(s)	658
HindII	GTYRAC	1 cut(s)	658
HindIII	AAGCTT	1 cut(s)	681
HinfI	GANTC	5 cut(s)	5, 90, 827, 1084, 1212
HpaII	CCGG	1 cut(s)	1471
HphI	GGTGA	3 cut(s)	287, 641, 958
Hpy166II	GTNNAC	2 cut(s)	658, 1324
Hpy188III	TCNNGA	6 cut(s)	317, 623, 831, 975, 1088, 1297
Hpy8I	GTNNAC	2 cut(s)	658, 1324
HpyAV	CCTTC	3 cut(s)	106, 1139, 1409
HpyCH4III	ACNGT	2 cut(s)	359, 809
HpyCH4V	TGCA	3 cut(s)	98, 748, 1433
HpyF10VI	GCNNNNNNNGC	7 cut(s)	477, 535, 733, 867, 1106, 1403, 1451
HpyF3I	CTNAG	7 cut(s)	167, 473, 891, 1074, 1191, 1380, 1455
Ksp22I	TGATCA	1 cut(s)	1170
KspI	CCGCGG	1 cut(s)	422
Kzo9I	GATC	5 cut(s)	66, 218, 345, 879, 1170
LguI	GCTCTTC	2 cut(s)	299, 1429
LmnI	GCTCC	3 cut(s)	339, 1075, 1276
Lsp1109I	GCAGC	4 cut(s)	289, 555, 1266, 1388
LweI	GCATC	2 cut(s)	107, 1432
MaeI	CTAG	3 cut(s)	831, 1088, 1284
MaeIII	GTNAC	7 cut(s)	59, 124, 275, 397, 1030, 1150, 1288
MalI	GATC	5 cut(s)	68, 220, 347, 881, 1172
MboI	GATC	5 cut(s)	66, 218, 345, 879, 1170
MboII	GAAGA	9 cut(s)	236, 286, 476, 568, 724, 1034, 1355, 1416, 1424
MhlI	GDGCHC	6 cut(s)	261, 807, 1053, 1072, 1260, 1461
MluCI	AATT	6 cut(s)	30, 179, 211, 817, 957, 1196
MlyI	GAGTC	1 cut(s)	84
MmeI	TCCRAC	3 cut(s)	393, 654, 951
MroXI	GAANNNNTTC	1 cut(s)	999
MseI	TTAA	2 cut(s)	636, 786
MslI	CAYNNNNRTG	1 cut(s)	944
MspA1I	CMGCKG	3 cut(s)	421, 1157, 1379
MspI	CCGG	1 cut(s)	1471
MspR9I	CCNGG	1 cut(s)	531
Mva1269I	GAATGC	1 cut(s)	414
MvaI	CCWGG	1 cut(s)	531
MvnI	CGCG	1 cut(s)	421
MwoI	GCNNNNNNNGC	7 cut(s)	477, 535, 733, 867, 1106, 1403, 1451
NdeII	GATC	5 cut(s)	66, 218, 345, 879, 1170
NlaIV	GGNNCC	2 cut(s)	1071, 1266
NmuCI	GTSAC	6 cut(s)	59, 124, 275, 397, 1150, 1288
NspI	RCATGY	2 cut(s)	283, 874
PaeI	GCATGC	1 cut(s)	874
PciI	ACATGT	1 cut(s)	279
PciSI	GCTCTTC	2 cut(s)	299, 1429
PctI	GAATGC	1 cut(s)	414
PdmI	GAANNNNTTC	1 cut(s)	999
PfeI	GAWTC	4 cut(s)	5, 827, 1084, 1212
PflMI	CCANNNNNTGG	1 cut(s)	1103
PkrI	GCNGC	5 cut(s)	304, 570, 1281, 1378, 1421
PleI	GAGTC	1 cut(s)	84
PpsI	GAGTC	1 cut(s)	84
PscI	ACATGT	1 cut(s)	279
Psp124BI	GAGCTC	2 cut(s)	261, 1461
Psp6I	CCWGG	1 cut(s)	529
PspFI	CCCAGC	1 cut(s)	1065
PspGI	CCWGG	1 cut(s)	529
PspN4I	GGNNCC	2 cut(s)	1071, 1266
PspPI	GGNCC	1 cut(s)	734
PsrI	GAACNNNNNNTAC	2 cut(s)	984, 1016
PstNI	CAGNNNCTG	2 cut(s)	1065, 1081
PvuII	CAGCTG	2 cut(s)	1157, 1379
RseI	CAYNNNNRTG	1 cut(s)	944
SacI	GAGCTC	2 cut(s)	261, 1461
SacII	CCGCGG	1 cut(s)	422
SapI	GCTCTTC	2 cut(s)	299, 1429
SaqAI	TTAA	2 cut(s)	636, 786
SatI	GCNGC	5 cut(s)	303, 569, 1280, 1377, 1420
Sau3AI	GATC	5 cut(s)	66, 218, 345, 879, 1170
Sau96I	GGNCC	1 cut(s)	734
SchI	GAGTC	1 cut(s)	84
ScrFI	CCNGG	1 cut(s)	531
SduI	GDGCHC	6 cut(s)	261, 807, 1053, 1072, 1260, 1461
SfaNI	GCATC	2 cut(s)	107, 1432
Sfr303I	CCGCGG	1 cut(s)	422
SgrBI	CCGCGG	1 cut(s)	422
SmiMI	CAYNNNNRTG	1 cut(s)	944
SmlI	CTYRAG	1 cut(s)	1460
SmoI	CTYRAG	1 cut(s)	1460
SphI	GCATGC	1 cut(s)	874
Sse9I	AATT	6 cut(s)	30, 179, 211, 817, 957, 1196
SsiI	CCGC	4 cut(s)	419, 421, 488, 1419
SspMI	CTAG	3 cut(s)	831, 1088, 1284
SstI	GAGCTC	2 cut(s)	261, 1461
StyD4I	CCNGG	1 cut(s)	529
StyI	CCWWGG	3 cut(s)	383, 409, 875
TaaI	ACNGT	2 cut(s)	359, 809
TaqI	TCGA	1 cut(s)	432
TasI	AATT	6 cut(s)	30, 179, 211, 817, 957, 1196
TauI	GCSGC	1 cut(s)	1422
TfiI	GAWTC	4 cut(s)	5, 827, 1084, 1212
Tru1I	TTAA	2 cut(s)	636, 786
Tru9I	TTAA	2 cut(s)	636, 786
TscAI	CASTG	3 cut(s)	406, 1265, 1345
TseFI	GTSAC	6 cut(s)	59, 124, 275, 397, 1150, 1288
TseI	GCWGC	4 cut(s)	302, 568, 1279, 1376
Tsp45I	GTSAC	6 cut(s)	59, 124, 275, 397, 1150, 1288
TspDTI	ATGAA	9 cut(s)	274, 286, 323, 725, 928, 960, 1130, 1204, 1438
TspGWI	ACGGA	1 cut(s)	1289
TspRI	CASTG	3 cut(s)	406, 1265, 1345
Van91I	CCANNNNNTGG	1 cut(s)	1103
XagI	CCTNNNNNAGG	1 cut(s)	614
XapI	RAATTY	3 cut(s)	30, 211, 957
XbaI	TCTAGA	2 cut(s)	830, 1087
XceI	RCATGY	2 cut(s)	283, 874
XmnI	GAANNNNTTC	1 cut(s)	999
XspI	CTAG	3 cut(s)	831, 1088, 1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.