Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0003876

Physical Location & Seq

Genomic Coordinates Reverse (-)

24041678 .. 24047281

Gene Structure 5604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1119300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGAAAGCCACGGAGGAAGATGACTCCGACCCTTTGCTGGGGAGTAGAAGAATTGAAAGGCAAAAAAGAGAAGAGAAGGAGCGTTTTGGTCGTCTACCAACTTTTAACGTCGAATTACAGGAAAGAAAACTTGACGAAAATGCAGGTCCAATACATGGAGAAACATCTGCAGAAAAGACCGACACAGAAATGGGGTTTGCTTCCTACCGCTCCTCTGTTTCCTCTGCCACCAAATGGCTGGGATTCGTCACCGCCGTCTGGGTCCAATCTATTTCCGGCAACAACTACACTTTCTCCAACTACTCCGCCGCCCTCAAAACCCTCATGGGCCTCACCCAGCTCGAACTCAACAACCTATCCGTCGCCAAAGACGTCGGCAAAGCGTTCGGTCTCCTCGCCGGGCTGGCTTCTGATAAACTGCCGACCTGGGTCATCCTCCTCATCGGCTCCGTCGAGGGTCTCGTCGGCTACGGCGCCCAGTGGCTCGTCGTCAGCGAAAGAATCAAGCCCCTCTCCTACTGGCAGATGTGTATATTTCTATGCATGGGCGGCAACAGCACGACGTGGATGAACACGGCGATTCTCGTCACATGTATTCGAAACTTCCGGCGAAACCGGGGACCCGTTTCGGGGATTCTGAAGGGTTACGTGGGTCTCAGCACCGCCATCTTCACCGACCTCTGCGCCGCTCTCTTCAACAACGACCCCGCTAGCTTCCTCCTCATGCTCGCCGTAACCCCCTTCGCCGTCTGCTTAACCGCCATGCTCTTCCTCCACGAGGTCCCCCCTTCTTCCTCCTCCTCAGAAGACAACCGCGACTCAAGATATTTCTGGGTCGTCAACGCCGTCGCCATCTGCGTCGCACTCTACCTCCTCGCCTACGACTTCATCCCAAACCCTTCGAACCTCTTGTCCCTAATCTTCTCCGTTATTCTGTTAATCCTCCTGGCGTCGCCGCTCGCGATTCCTGCGTATGCGTTTTTCACCGCGTGGGCCTCGAAGCCGGACCTGGTCGCGTCCGAGTCGGGTCCAGATCCGAACACCCGATCTGACGAGCCACTTTTGAGGCAGACGGCGGCGGACGACACACAGCACAAGCCAGAGGTGGCTGCTGCGGCGGCGGAGGTGGTGGAGGCGAAGAGGAGGCCGGTGCTCGGGGAGGACCACACCATCTTCGATGCGATGGTGAAGTTGGATTTCTGGATTTTGTTCGTGTCGTTTTTGTGCGGGGTGGGGACGGGTCTGGCGGTTATGAACAATATGGGGCAGATTGGATTGGCGCTCGGATACGTGGACGTGTCGATCTTCGTTTCGCTGACGAGCATTTGGGGTTTTTTCGGGCGGATCGGTTCGGGTATGATTTCGGAGTACTTCATCAGGAAAGCTGCAATACCAAGACCTCTATGGAATGCTGCTTCTCAGATTCTAATGGCTGTTGGCTACATCCTCATGGCCATTGCCATGCCCGGTTCGCTATACATCGGTTCGACCATCGTTGGCATTTGCTATGGAGTTCGTCTTGCCGTCACAGTACCCGTCGCTTCTGAACTATTTGGTCTCAAGTACTACGGACTTATTTACAACATTCTAATCCTCAACCTTCCACTCGGCTCCTTCCTCTTCTCCGGCCTGCTTGCCGGACTATTGTACGACATGGAGGCTACCACCACGGAAGGAGGTGGCAACACCTGCGTCGGCGCACATTGTTACCGGCTCGTGTTTGTCATCATGGCCATTGCCTGTGTTATTGGGTTTGGTTTGGACATTTTGCTGTCCATTAGAACCAAGAATCTCTACACGAGGATTCAAGCTGGCAAGAAAACAAAGAGAGTGGTTGATGGCACACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nodulin-like

Protein Analysis

617

Amino Acids

67.07

Weight (kDa)

6.28

Isoelectric Point (pI)

33.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	78 - 323	6e-94	Nodulin-like
NFD4_C	PF23262	396 - 599	3.9e-31	NFD4, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003876)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16660 AT2G16660 AT4G34950
fragaria_vesca	FvH4_1g11700 FvH4_2g01480
malus_domestica	MD02G1130000.v1.1 MD05G1119300.v1.1 MD10G1122400.v1.1
prunus_persica	Prupe.7G169700_v2.0.a1 Prupe.8G163500_v2.0.a1
pyrus_communis	pycom02g10190 pycom05g11320 pycom05g11330 pycom10g10530
rosa_chinensis	RchiOBHm_Chr2g0099271 RchiOBHm_Chr6g0244111
rosa_laevigata	RLG00000015380 RLG00000016867
rosa_multiflora	Rmu_sc0001455.1_g000032 Rmu_sc0029692.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143260 Rroxscaffold_7G00216060
rosa_rugosa	Rorug02G0078300 Rorug05G0507500
rosa_samantha	Rh2AG127600 Rh2BG130600 Rh2CG131800 Rh2DG132300 Rh6AG022000 Rh6BG017700 Rh6CG014400 Rh6DG015600
rosa_wichuraiana	Rw2G009850 Rw6G001810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1697
AatII	GACGTC	1 cut(s)	375
Acc36I	ACCTGC	2 cut(s)	134, 1697
AccB1I	GGYRCC	1 cut(s)	473
AccB7I	CCANNNNNTGG	2 cut(s)	155, 234
AccBSI	CCGCTC	3 cut(s)	210, 689, 958
AccI	GTMKAC	1 cut(s)	94
AccII	CGCG	4 cut(s)	816, 962, 989, 1016
AclWI	GGATC	2 cut(s)	1028, 1352
AcoI	YGGCCR	2 cut(s)	1452, 1731
AcuI	CTGAAG	1 cut(s)	659
AcyI	GRCGYC	3 cut(s)	372, 474, 950
AdeI	CACNNNGTG	2 cut(s)	564, 990
AfaI	GTAC	4 cut(s)	1370, 1533, 1565, 1649
AfiI	CCNNNNNNNGG	9 cut(s)	37, 38, 155, 234, 258, 629, 630, 778, 1154
AflIII	ACRYGT	2 cut(s)	590, 1296
AgsI	TTSAA	3 cut(s)	56, 697, 1808
AjiI	CACGTC	2 cut(s)	564, 1297
AjnI	CCWGG	3 cut(s)	425, 945, 1008
AloI	GAACNNNNNNTCC	2 cut(s)	896, 928
AluBI	AGCT	4 cut(s)	340, 714, 1385, 1811
AluI	AGCT	4 cut(s)	340, 714, 1385, 1811
Alw21I	GWGCWC	1 cut(s)	1155
Alw26I	GTCTC	4 cut(s)	395, 464, 659, 1562
AlwI	GGATC	2 cut(s)	1028, 1352
Ama87I	CYCGRG	1 cut(s)	1154
AoxI	GGCC	6 cut(s)	328, 993, 1145, 1452, 1627, 1731
ApeKI	GCWGC	4 cut(s)	1109, 1112, 1385, 1412
ArsI	GACNNNNNNTTYG	2 cut(s)	896, 928
AspLEI	GCGC	4 cut(s)	476, 686, 1282, 1700
AspS9I	GGNCC	9 cut(s)	146, 262, 328, 620, 781, 993, 1006, 1028, 1162
AsuC2I	CCSGG	3 cut(s)	400, 617, 1467
AsuHPI	GGTGA	5 cut(s)	241, 325, 664, 976, 1198
AsuII	TTCGAA	2 cut(s)	598, 902
AsuNHI	GCTAGC	1 cut(s)	710
AvaI	CYCGRG	1 cut(s)	1154
AvaII	GGWCC	7 cut(s)	146, 262, 620, 781, 1006, 1028, 1162
BalI	TGGCCA	2 cut(s)	1454, 1733
BanI	GGYRCC	1 cut(s)	473
BauI	CACGAG	3 cut(s)	776, 1715, 1798
BbsI	GAAGAC	1 cut(s)	813
Bbv12I	GWGCWC	1 cut(s)	1155
BbvI	GCAGC	4 cut(s)	1096, 1099, 1372, 1399
BccI	CCATC	6 cut(s)	674, 860, 1177, 1178, 1499, 1832
BceAI	ACGGC	8 cut(s)	239, 487, 591, 716, 731, 830, 1089, 1508
BcgI	CGANNNNNNTGC	2 cut(s)	367, 401
BciT130I	CCWGG	3 cut(s)	427, 947, 1010
BciVI	GTATCC	1 cut(s)	1280
BcnI	CCSGG	3 cut(s)	400, 617, 1467
BcoDI	GTCTC	4 cut(s)	395, 464, 659, 1562
BfaI	CTAG	1 cut(s)	711
BfmI	CTRYAG	1 cut(s)	168
BfoI	RGCGCY	2 cut(s)	477, 1283
BfuAI	ACCTGC	2 cut(s)	134, 1697
BfuI	GTATCC	1 cut(s)	1280
BglI	GCCNNNNNGGC	1 cut(s)	404
BmcAI	AGTACT	2 cut(s)	1370, 1565
Bme1390I	CCNGG	6 cut(s)	400, 427, 617, 947, 1010, 1467
Bme18I	GGWCC	7 cut(s)	146, 262, 620, 781, 1006, 1028, 1162
BmeT110I	CYCGRG	1 cut(s)	1154
BmgBI	CACGTC	2 cut(s)	564, 1297
BmgT120I	GGNCC	9 cut(s)	146, 262, 328, 620, 781, 993, 1006, 1028, 1162
BmiI	GGNNCC	8 cut(s)	263, 448, 475, 621, 622, 783, 1029, 1612
BmrFI	CCNGG	6 cut(s)	400, 427, 617, 947, 1010, 1467
BmrI	ACTGGG	1 cut(s)	472
BmsI	GCATC	1 cut(s)	1168
BmtI	GCTAGC	1 cut(s)	714
BmuI	ACTGGG	1 cut(s)	472
BoxI	GACNNNNGTC	1 cut(s)	428
BpiI	GAAGAC	1 cut(s)	813
Bpu14I	TTCGAA	2 cut(s)	598, 902
BpuEI	CTTGAG	2 cut(s)	805, 1544
BpuMI	CCSGG	3 cut(s)	400, 617, 1467
BsaAI	YACGTR	2 cut(s)	649, 1291
BsaHI	GRCGYC	3 cut(s)	372, 474, 950
BsaI	GGTCTC	4 cut(s)	395, 464, 659, 1562
BsaJI	CCNNGG	4 cut(s)	9, 426, 616, 1668
BsaXI	ACNNNNNCTCC	4 cut(s)	278, 308, 855, 885
Bsc4I	CCNNNNNNNGG	9 cut(s)	37, 38, 155, 234, 258, 629, 630, 778, 1154
Bse118I	RCCGGY	2 cut(s)	1147, 1710
Bse1I	ACTGG	2 cut(s)	478, 524
Bse3DI	GCAATG	2 cut(s)	1455, 1734
BseBI	CCWGG	3 cut(s)	427, 947, 1010
BseDI	CCNNGG	4 cut(s)	9, 426, 616, 1668
BseGI	GGATG	4 cut(s)	432, 573, 888, 1443
BseLI	CCNNNNNNNGG	9 cut(s)	37, 38, 155, 234, 258, 629, 630, 778, 1154
BseMI	GCAATG	2 cut(s)	1455, 1734
BseMII	CTCAG	3 cut(s)	670, 816, 1433
BseNI	ACTGG	2 cut(s)	478, 524
BseRI	GAGGAG	8 cut(s)	202, 383, 428, 710, 787, 790, 863, 1156
BseXI	GCAGC	4 cut(s)	1096, 1099, 1372, 1399
BseYI	CCCAGC	3 cut(s)	37, 238, 336
Bsh1236I	CGCG	4 cut(s)	816, 962, 989, 1016
BshFI	GGCC	6 cut(s)	330, 995, 1147, 1454, 1629, 1733
BshNI	GGYRCC	1 cut(s)	473
BsiHKAI	GWGCWC	1 cut(s)	1155
BsiHKCI	CYCGRG	1 cut(s)	1154
BslFI	GGGAC	4 cut(s)	633, 767, 898, 1249
BslI	CCNNNNNNNGG	9 cut(s)	37, 38, 155, 234, 258, 629, 630, 778, 1154
BsmAI	GTCTC	4 cut(s)	395, 464, 659, 1562
BsmFI	GGGAC	4 cut(s)	633, 767, 898, 1249
BsmI	GAATGC	1 cut(s)	1414
BsnI	GGCC	6 cut(s)	330, 995, 1147, 1454, 1629, 1733
Bso31I	GGTCTC	4 cut(s)	395, 464, 659, 1562
BsoBI	CYCGRG	1 cut(s)	1154
Bsp119I	TTCGAA	2 cut(s)	598, 902
Bsp1286I	GDGCHC	1 cut(s)	1155
Bsp143I	GATC	4 cut(s)	1033, 1046, 1302, 1344
Bsp68I	TCGCGA	1 cut(s)	962
BspANI	GGCC	6 cut(s)	330, 995, 1147, 1454, 1629, 1733
BspCNI	CTCAG	3 cut(s)	669, 815, 1432
BspFNI	CGCG	4 cut(s)	816, 962, 989, 1016
BspLI	GGNNCC	8 cut(s)	263, 448, 475, 621, 622, 783, 1029, 1612
BspMAI	CTGCAG	1 cut(s)	172
BspMI	ACCTGC	2 cut(s)	134, 1697
BspOI	GCTAGC	1 cut(s)	714
BspPI	GGATC	2 cut(s)	1028, 1352
BspQI	GCTCTTC	1 cut(s)	773
BspT104I	TTCGAA	2 cut(s)	598, 902
BspT107I	GGYRCC	1 cut(s)	473
BspTNI	GGTCTC	4 cut(s)	395, 464, 659, 1562
BsrBI	CCGCTC	3 cut(s)	210, 689, 958
BsrDI	GCAATG	2 cut(s)	1455, 1734
BsrFI	RCCGGY	2 cut(s)	1147, 1710
BsrI	ACTGG	2 cut(s)	478, 524
BssAI	RCCGGY	2 cut(s)	1147, 1710
BssECI	CCNNGG	4 cut(s)	9, 426, 616, 1668
BssMI	GATC	4 cut(s)	1033, 1046, 1302, 1344
BssNI	GRCGYC	3 cut(s)	372, 474, 950
BssSI	CACGAG	3 cut(s)	776, 1715, 1798
Bst2BI	CACGAG	3 cut(s)	776, 1715, 1798
Bst2UI	CCWGG	3 cut(s)	427, 947, 1010
Bst4CI	ACNGT	2 cut(s)	1531, 1848
Bst6I	CTCTTC	5 cut(s)	66, 698, 773, 1133, 1625
BstACI	GRCGYC	3 cut(s)	372, 474, 950
BstAPI	GCANNNNNTGC	1 cut(s)	1689
BstBAI	YACGTR	2 cut(s)	649, 1291
BstBI	TTCGAA	2 cut(s)	598, 902
BstC8I	GCNNGC	7 cut(s)	405, 712, 729, 960, 1631, 1635, 1813
BstDEI	CTNAG	3 cut(s)	656, 802, 1419
BstDSI	CCRYGG	2 cut(s)	9, 1668
BstENI	CCTNNNNNAGG	1 cut(s)	776
BstF5I	GGATG	4 cut(s)	432, 573, 888, 1443
BstFNI	CGCG	4 cut(s)	816, 962, 989, 1016
BstH2I	RGCGCY	2 cut(s)	477, 1283
BstHHI	GCGC	4 cut(s)	476, 686, 1282, 1700
BstKTI	GATC	4 cut(s)	1036, 1049, 1305, 1347
BstMAI	GTCTC	4 cut(s)	395, 464, 659, 1562
BstMBI	GATC	4 cut(s)	1033, 1046, 1302, 1344
BstMWI	GCNNNNNNNGC	8 cut(s)	404, 549, 555, 968, 1115, 1118, 1471, 1689
BstNI	CCWGG	3 cut(s)	427, 947, 1010
BstNSI	RCATGY	1 cut(s)	594
BstPAI	GACNNNNGTC	1 cut(s)	428
BstSCI	CCNGG	6 cut(s)	398, 425, 615, 945, 1008, 1465
BstSFI	CTRYAG	1 cut(s)	168
BstUI	CGCG	4 cut(s)	816, 962, 989, 1016
BstV1I	GCAGC	4 cut(s)	1096, 1099, 1372, 1399
BstV2I	GAAGAC	1 cut(s)	813
BstX2I	RGATCY	1 cut(s)	1033
BstXI	CCANNNNNNTGG	1 cut(s)	238
BstYI	RGATCY	1 cut(s)	1033
BsuI	GTATCC	1 cut(s)	1280
BsuRI	GGCC	6 cut(s)	330, 995, 1147, 1454, 1629, 1733
BtgI	CCRYGG	2 cut(s)	9, 1668
BtgZI	GCGATG	1 cut(s)	1196
BtrI	CACGTC	2 cut(s)	564, 1297
BtsCI	GGATG	4 cut(s)	432, 573, 888, 1443
BtsIMutI	CAGTG	1 cut(s)	485
BtuMI	TCGCGA	1 cut(s)	962
BveI	ACCTGC	2 cut(s)	134, 1697
Cac8I	GCNNGC	7 cut(s)	405, 712, 729, 960, 1631, 1635, 1813
CfoI	GCGC	4 cut(s)	476, 686, 1282, 1700
Cfr10I	RCCGGY	2 cut(s)	1147, 1710
Cfr13I	GGNCC	9 cut(s)	146, 262, 328, 620, 781, 993, 1006, 1028, 1162
CseI	GACGC	4 cut(s)	847, 939, 1005, 1681
CsiI	ACCWGGT	1 cut(s)	1008
Csp6I	GTAC	4 cut(s)	1369, 1532, 1564, 1648
CspCI	CAANNNNNGTGG	2 cut(s)	1812, 1847
CviQI	GTAC	4 cut(s)	1369, 1532, 1564, 1648
DdeI	CTNAG	3 cut(s)	656, 802, 1419
DinI	GGCGCC	1 cut(s)	475
DpnI	GATC	4 cut(s)	1035, 1048, 1304, 1346
DpnII	GATC	4 cut(s)	1033, 1046, 1302, 1344
DraIII	CACNNNGTG	2 cut(s)	564, 990
EaeI	YGGCCR	2 cut(s)	1452, 1731
Eam1104I	CTCTTC	5 cut(s)	66, 698, 773, 1133, 1625
EarI	CTCTTC	5 cut(s)	66, 698, 773, 1133, 1625
EciI	GGCGGA	4 cut(s)	295, 1094, 1136, 1357
Eco31I	GGTCTC	4 cut(s)	395, 464, 659, 1562
Eco47I	GGWCC	7 cut(s)	146, 262, 620, 781, 1006, 1028, 1162
Eco57I	CTGAAG	1 cut(s)	659
Eco88I	CYCGRG	1 cut(s)	1154
EcoNI	CCTNNNNNAGG	1 cut(s)	776
EcoO109I	RGGNCCY	2 cut(s)	620, 781
EcoRII	CCWGG	3 cut(s)	425, 945, 1008
EcoT22I	ATGCAT	1 cut(s)	545
EgeI	GGCGCC	1 cut(s)	475
EheI	GGCGCC	1 cut(s)	475
FaqI	GGGAC	4 cut(s)	633, 767, 898, 1249
FauI	CCCGC	2 cut(s)	715, 1220
FblI	GTMKAC	1 cut(s)	94
FokI	GGATG	4 cut(s)	419, 580, 875, 1430
FspBI	CTAG	1 cut(s)	711
GlaI	GCGC	4 cut(s)	475, 685, 1281, 1699
GsaI	CCCAGC	3 cut(s)	41, 242, 340
HaeII	RGCGCY	2 cut(s)	477, 1283
HaeIII	GGCC	6 cut(s)	330, 995, 1147, 1454, 1629, 1733
HgaI	GACGC	4 cut(s)	847, 939, 1005, 1681
HhaI	GCGC	4 cut(s)	476, 686, 1282, 1700
Hin1I	GRCGYC	3 cut(s)	372, 474, 950
Hin6I	GCGC	4 cut(s)	474, 684, 1280, 1698
HinP1I	GCGC	4 cut(s)	474, 684, 1280, 1698
HincII	GTYRAC	1 cut(s)	841
HindII	GTYRAC	1 cut(s)	841
HphI	GGTGA	5 cut(s)	241, 325, 664, 976, 1198
Hpy166II	GTNNAC	3 cut(s)	95, 841, 1294
Hpy188III	TCNNGA	5 cut(s)	822, 961, 1031, 1201, 1378
Hpy8I	GTNNAC	3 cut(s)	95, 841, 1294
HpyAV	CCTTC	8 cut(s)	70, 634, 751, 798, 909, 1610, 1624, 1667
HpyCH4III	ACNGT	2 cut(s)	1531, 1848
HpyCH4IV	ACGT	6 cut(s)	108, 372, 563, 648, 1290, 1296
HpyCH4V	TGCA	4 cut(s)	143, 170, 543, 1388
HpyF10VI	GCNNNNNNNGC	8 cut(s)	404, 549, 555, 968, 1115, 1118, 1471, 1689
HpyF3I	CTNAG	3 cut(s)	656, 802, 1419
HpySE526I	ACGT	6 cut(s)	108, 372, 563, 648, 1290, 1296
Hsp92I	GRCGYC	3 cut(s)	372, 474, 950
HspAI	GCGC	4 cut(s)	474, 684, 1280, 1698
KasI	GGCGCC	1 cut(s)	473
KflI	GGGWCCC	1 cut(s)	620
Kzo9I	GATC	4 cut(s)	1033, 1046, 1302, 1344
LguI	GCTCTTC	1 cut(s)	773
LmnI	GCTCC	4 cut(s)	79, 215, 452, 1616
Lsp1109I	GCAGC	4 cut(s)	1096, 1099, 1372, 1399
LweI	GCATC	1 cut(s)	1168
MabI	ACCWGGT	1 cut(s)	1008
MaeI	CTAG	1 cut(s)	711
MaeII	ACGT	6 cut(s)	108, 372, 563, 648, 1290, 1296
MaeIII	GTNAC	6 cut(s)	247, 586, 644, 733, 1525, 1706
MalI	GATC	4 cut(s)	1035, 1048, 1304, 1346
MbiI	CCGCTC	3 cut(s)	210, 689, 958
MboI	GATC	4 cut(s)	1033, 1046, 1302, 1344
MflI	RGATCY	1 cut(s)	1033
MhlI	GDGCHC	1 cut(s)	1155
MlsI	TGGCCA	2 cut(s)	1454, 1733
MluCI	AATT	2 cut(s)	51, 113
MluNI	TGGCCA	2 cut(s)	1454, 1733
Mly113I	GGCGCC	1 cut(s)	474
MlyI	GAGTC	3 cut(s)	17, 812, 1031
MmeI	TCCRAC	3 cut(s)	51, 321, 1173
Mox20I	TGGCCA	2 cut(s)	1454, 1733
Mph1103I	ATGCAT	1 cut(s)	545
MscI	TGGCCA	2 cut(s)	1454, 1733
MseI	TTAA	3 cut(s)	105, 755, 938
MslI	CAYNNNNRTG	3 cut(s)	188, 1448, 1460
Msp20I	TGGCCA	2 cut(s)	1454, 1733
MspR9I	CCNGG	6 cut(s)	400, 427, 617, 947, 1010, 1467
Mva1269I	GAATGC	1 cut(s)	1414
MvaI	CCWGG	3 cut(s)	427, 947, 1010
MvnI	CGCG	4 cut(s)	816, 962, 989, 1016
MwoI	GCNNNNNNNGC	8 cut(s)	404, 549, 555, 968, 1115, 1118, 1471, 1689
NarI	GGCGCC	1 cut(s)	474
NciI	CCSGG	3 cut(s)	400, 617, 1467
NdeII	GATC	4 cut(s)	1033, 1046, 1302, 1344
NheI	GCTAGC	1 cut(s)	710
NlaIV	GGNNCC	8 cut(s)	263, 448, 475, 621, 622, 783, 1029, 1612
NmeAIII	GCCGAG	1 cut(s)	1587
NmuCI	GTSAC	3 cut(s)	247, 586, 1525
NruI	TCGCGA	1 cut(s)	962
NsiI	ATGCAT	1 cut(s)	545
NspI	RCATGY	1 cut(s)	594
NspV	TTCGAA	2 cut(s)	598, 902
PaqCI	CACCTGC	1 cut(s)	1697
PciI	ACATGT	1 cut(s)	590
PciSI	GCTCTTC	1 cut(s)	773
PcsI	WCGNNNNNNNCGW	8 cut(s)	252, 369, 450, 459, 492, 843, 855, 959
PctI	GAATGC	1 cut(s)	1414
PfeI	GAWTC	8 cut(s)	243, 501, 580, 634, 964, 1423, 1789, 1804
PflFI	GACNNNGTC	1 cut(s)	1010
PflMI	CCANNNNNTGG	2 cut(s)	155, 234
PleI	GAGTC	3 cut(s)	17, 812, 1030
PluTI	GGCGCC	1 cut(s)	477
PpsI	GAGTC	3 cut(s)	17, 812, 1030
Ppu21I	YACGTR	2 cut(s)	649, 1291
PpuMI	RGGWCCY	2 cut(s)	620, 781
PscI	ACATGT	1 cut(s)	590
PshAI	GACNNNNGTC	1 cut(s)	428
Psp5II	RGGWCCY	2 cut(s)	620, 781
Psp6I	CCWGG	3 cut(s)	425, 945, 1008
PspFI	CCCAGC	3 cut(s)	37, 238, 336
PspGI	CCWGG	3 cut(s)	425, 945, 1008
PspN4I	GGNNCC	8 cut(s)	263, 448, 475, 621, 622, 783, 1029, 1612
PspPI	GGNCC	9 cut(s)	146, 262, 328, 620, 781, 993, 1006, 1028, 1162
PspPPI	RGGWCCY	2 cut(s)	620, 781
PstI	CTGCAG	1 cut(s)	172
PsuI	RGATCY	1 cut(s)	1033
PsyI	GACNNNGTC	1 cut(s)	1010
RruI	TCGCGA	1 cut(s)	962
RsaI	GTAC	4 cut(s)	1370, 1533, 1565, 1649
RsaNI	GTAC	4 cut(s)	1369, 1532, 1564, 1648
RseI	CAYNNNNRTG	3 cut(s)	188, 1448, 1460
SapI	GCTCTTC	1 cut(s)	773
SaqAI	TTAA	3 cut(s)	105, 755, 938
Sau3AI	GATC	4 cut(s)	1033, 1046, 1302, 1344
Sau96I	GGNCC	9 cut(s)	146, 262, 328, 620, 781, 993, 1006, 1028, 1162
ScaI	AGTACT	2 cut(s)	1370, 1565
SchI	GAGTC	3 cut(s)	17, 812, 1031
ScrFI	CCNGG	6 cut(s)	400, 427, 617, 947, 1010, 1467
SduI	GDGCHC	1 cut(s)	1155
SexAI	ACCWGGT	1 cut(s)	1008
SfaNI	GCATC	1 cut(s)	1168
SfcI	CTRYAG	1 cut(s)	168
SfoI	GGCGCC	1 cut(s)	475
SfuI	TTCGAA	2 cut(s)	598, 902
SinI	GGWCC	7 cut(s)	146, 262, 620, 781, 1006, 1028, 1162
SmiMI	CAYNNNNRTG	3 cut(s)	188, 1448, 1460
SmlI	CTYRAG	2 cut(s)	820, 1559
SmoI	CTYRAG	2 cut(s)	820, 1559
Sse9I	AATT	2 cut(s)	51, 113
SspDI	GGCGCC	1 cut(s)	473
SspMI	CTAG	1 cut(s)	711
StyD4I	CCNGG	6 cut(s)	398, 425, 615, 945, 1008, 1465
TaaI	ACNGT	2 cut(s)	1531, 1848
TaiI	ACGT	6 cut(s)	111, 375, 566, 651, 1293, 1299
TaqI	TCGA	9 cut(s)	111, 342, 453, 598, 902, 998, 1176, 1301, 1487
TaqII	GACCGA	2 cut(s)	194, 377
TasI	AATT	2 cut(s)	51, 113
TatI	WGTACW	2 cut(s)	1368, 1563
TauI	GCSGC	7 cut(s)	311, 552, 689, 958, 1079, 1118, 1121
TfiI	GAWTC	8 cut(s)	243, 501, 580, 634, 964, 1423, 1789, 1804
Tru1I	TTAA	3 cut(s)	105, 755, 938
Tru9I	TTAA	3 cut(s)	105, 755, 938
TscAI	CASTG	1 cut(s)	485
TseFI	GTSAC	3 cut(s)	247, 586, 1525
TseI	GCWGC	4 cut(s)	1109, 1112, 1385, 1412
Tsp45I	GTSAC	3 cut(s)	247, 586, 1525
TspDTI	ATGAA	5 cut(s)	17, 584, 877, 1268, 1363
TspGWI	ACGGA	6 cut(s)	26, 349, 439, 916, 1584, 1685
TspRI	CASTG	1 cut(s)	485
Tth111I	GACNNNGTC	1 cut(s)	1010
Van91I	CCANNNNNTGG	2 cut(s)	155, 234
VpaK11BI	GGWCC	7 cut(s)	146, 262, 620, 781, 1006, 1028, 1162
XagI	CCTNNNNNAGG	1 cut(s)	776
XceI	RCATGY	1 cut(s)	594
XcmI	CCANNNNNNNNNTGG	2 cut(s)	235, 1401
XmiI	GTMKAC	1 cut(s)	94
XspI	CTAG	1 cut(s)	711
ZraI	GACGTC	1 cut(s)	373
ZrmI	AGTACT	2 cut(s)	1370, 1565
Zsp2I	ATGCAT	1 cut(s)	545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.