Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003876

Physical Location & Seq

Genomic Coordinates Forward (+)

7026912 .. 7032110

Gene Structure 5199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g10190.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGCTTTTTCCGTCGCGATTTCTCGCTTCCCCTGCCGGAAAATGGCTGGGATTTGTGACAGCCATTTGGGTTCAAGCCATCAGCGGCAACAACTACACATTTTCCAACTATTCTGGTGCCCTAAAATCTTTGATGGAACTCTCCCAGACTCAACTCAACAATCTATCCGTTGCTAAAGATGTAGGCAAGGCATTCGGGTTGTTATCCGGCCTTGCTTCCGATCGTTTGCCGACTTCCGCCATCCTCATTGTCGGAGCATTGGAGGGCCTCATTGGATATGGAGTTCAATGGCTGGTTGTTAGTCAGAGAATCAGCCCTCTTCCCTACTGGCAGATGTGCATATTTATGTGCATGGGAGGAAACAGTACAACATGGATGAACACGGCAGTGCTAGTGACATGCATGAGAAATTTCACGAAAAACCGCGGCCCGGTCTCAGGAATCCTCAAAGGGTATGTAGGGCTAAGCACAGCAATCTTCACAGATTTATGCACAGCTCTCTTCTCATCCAATCCCTCCAAATTTCTCTTCATGCTTGCCGTAGTCCCTGCTGTTATCTGCCTCATAGCTACCCTTTTCCTCAAGGAAACCCCGCCGGCTTCCACTCTACCGGAGATAAAACAAGAAGCCAAGTTCTTCCATGTCTTTGATTTAATTGCGGTTTTCGTAGCTATCTATCTCTTGGCCTTTGACATGTCTGGAAAGCACGGCCATGATCTCTCTTTGATATTTTCTGTTGGACTTCTTTTCCTGCTAGCTTTTCCCTTGTGTGTACCTATGTACACTTTGCTTTTCAAACCCAATTCTCATCACGATTTAGAACAAGAAATTAAGGAACCTTTGCTTGCTCAAGTCGGACCGATTGTGAAGCCAGAGATGCAGAACTCTAATGGTGCAGGCATTAAGGTGGATGATGTTGCGGTGAAGAGACAACCTTTGATTGGGGAAGACCATACCATTTTTGAAATGATAAAAACACTTGAGTTTTGGATACTTTTTGTGTCGTTTCTTTGTGGTGTAGGGACTGGAATGTGTGTCATGAACAACATGGCTCAAATGGGACTTGCTCTTGGCTACTATGATGTCTCCATTTTTGTGTCACTTACTAGCATTTGGGGGTTCTTTGGACGCATAGTCTCCGGCCTAGTCTCGGAATACTATATCGGGAAATCAGCCACCCCTAGGCCACTTTGGAATGCAGCTTCCGAGATTCTAATGGCCCTCGGGTTCATATCCATGGCGTCGGCCTTGCCGGCTTCCTTCCATATCGGCTCGAGTCTAGTCGGAATGGGTTACGGAGTCCTCCTCACCATAACAGTTCCAGTTGCCTCGGAGCTATTTGGTCTCAAATACTATGGCCTCTTGTACAACATTCTCATCCTCAACCTTCCCTTGGGCTCCTTCCTCTTCTCTGGCTTGCTTGCTGGCATTGTCTACGATTCTCAAGCCACAGTTAGCCCTAGTGGAGGTGGGACCACTTGCGTTGGGTCCCACTGCTACATGCTTGTGTTTGTTGTGATGGCAGTTGCTTGCATGTTTGGGCTTGCAATGGACGTTTTGCTGGCGTTTAGGACAAAGCATGTTTATGCCAAGATTTGTGAGAGCAAGAAACCGCAGTATAAGTGCCCGCAGACAGAGCTGCAGAGACTGAATCCAATGGAAACAACCGTCAAAGCTTCCTCTCTCCGGTGGAAAATTCTCCGTCAAGCTCTCCTCCGCAAACCCACCGGAGAAGATTCGCAATCCGAAATCGGCGTCAAGAAAATCACGAGGAAGACGACGCAGGGCTTCAACTTGATCCCATCCCACATCGCCAACGACCCATCATCTCGCTCCGGCGACGTCACCGTCTGCTACACCTTGCCCGACGACTCTGCCCCCAAGCTTCGCCTCACTCAAAGAGTGGTTGACCGAGCTGAGCTCAGTGACTTTGAGATTTGTAATGAGTACAATATTGACAACACTGGGCTTGTTTGTCAGTGGCCGTCGGAAGAGGTTCTTGCTTATTTTTGCTTGACTCACGCGGACATGTTCAGGTCGAAAAGAGTACTTGAGCTCGGGTCAGGCTATGGCCTAGGCGGCTTCGTTATTGCAGCTGTTACTGAGGCATCAGAAGTTGTAATTTCAGATGGGAATCCACAAGTAGTAAATTATATTCAGCACAATATTGATGCAAACTCTAAAGCATTTGGTGGTACAAAAGTGAAGTCCATGATGTTGCATTGGAATCAGAATGAAATTTCTACTATCTCTAGCGAATTTGATCTCATTGTTGCTAGTGACTGCACTTTTTTTAAGGAATTCCACAATGGACTTGCTCAAATTCTCAAATTCCTGCTGGGAAAAGTGAAATCCTCGGAAGCTATATTCTTCAGTCCTAAAAGGGGTGACTCCTTAGACAAGTTCTTAGAAACAATCAAAGAATGTGGTTTGCACTTTAGCATAACAGAGAATTATGATGCAGAAATTTGGAAGCATCACGAGGAGTTTTTGGACGGCGATGGTTCCTGGCCTAGCTATCAAAAGGATCACTGCTATCCCTTATTGATCAGGATTACAGAATGGGAAATGCAATGTACAGCCAAAGTTTGGCCCCTGAAAATGGTGGTGGATACAGATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nodulin-like

Protein Analysis

875

Amino Acids

96.35

Weight (kDa)

6.33

Isoelectric Point (pI)

36.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003876)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16660 AT2G16660 AT4G34950
fragaria_vesca	FvH4_1g11700 FvH4_2g01480
malus_domestica	MD02G1130000.v1.1 MD05G1119300.v1.1 MD10G1122400.v1.1
prunus_persica	Prupe.7G169700_v2.0.a1 Prupe.8G163500_v2.0.a1
pyrus_communis	pycom02g10190 pycom05g11320 pycom05g11330 pycom10g10530
rosa_chinensis	RchiOBHm_Chr2g0099271 RchiOBHm_Chr6g0244111
rosa_laevigata	RLG00000015380 RLG00000016867
rosa_multiflora	Rmu_sc0001455.1_g000032 Rmu_sc0029692.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143260 Rroxscaffold_7G00216060
rosa_rugosa	Rorug02G0078300 Rorug05G0507500
rosa_samantha	Rh2AG127600 Rh2BG130600 Rh2CG131800 Rh2DG132300 Rh6AG022000 Rh6BG017700 Rh6CG014400 Rh6DG015600
rosa_wichuraiana	Rw2G009850 Rw6G001810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1847
AatII	GACGTC	1 cut(s)	1845
AccB1I	GGYRCC	1 cut(s)	116
AccB7I	CCANNNNNTGG	1 cut(s)	2589
AccI	GTMKAC	1 cut(s)	1434
AccII	CGCG	3 cut(s)	16, 426, 2024
AclWI	GGATC	3 cut(s)	1792, 2535, 2612
AcoI	YGGCCR	2 cut(s)	709, 1982
AcsI	RAATTY	9 cut(s)	409, 521, 1695, 2238, 2258, 2300, 2322, 2330, 2466
AcuI	CTGAAG	1 cut(s)	2356
AcyI	GRCGYC	3 cut(s)	1241, 1755, 1842
AfaI	GTAC	8 cut(s)	367, 774, 782, 1367, 1949, 2049, 2197, 2578
AflIII	ACRYGT	2 cut(s)	693, 2028
AgsI	TTSAA	5 cut(s)	74, 287, 796, 965, 1792
AhdI	GACNNNNNGTC	1 cut(s)	1133
AjnI	CCWGG	1 cut(s)	2507
AjuI	GAANNNNNNNTTGG	2 cut(s)	512, 544
AleI	CACNNNNGTG	1 cut(s)	386
AloI	GAACNNNNNNTCC	2 cut(s)	267, 299
Alw21I	GWGCWC	2 cut(s)	1923, 2058
Alw26I	GTCTC	7 cut(s)	439, 922, 1090, 1141, 1153, 1349, 1639
AlwI	GGATC	3 cut(s)	1792, 2535, 2612
AlwNI	CAGNNNCTG	1 cut(s)	1648
Ama87I	CYCGRG	3 cut(s)	1223, 1273, 2057
ApeKI	GCWGC	3 cut(s)	1199, 1639, 2093
ApoI	RAATTY	9 cut(s)	409, 521, 1695, 2238, 2258, 2300, 2322, 2330, 2466
ArsI	GACNNNNNNTTYG	4 cut(s)	1740, 1772, 2192, 2224
Asp700I	GAANNNNTTC	1 cut(s)	1995
AspA2I	CCTAGG	2 cut(s)	1181, 2074
AspS9I	GGNCC	7 cut(s)	265, 428, 857, 1219, 1473, 1488, 2592
AsuC2I	CCSGG	1 cut(s)	431
AsuHPI	GGTGA	4 cut(s)	934, 1300, 1837, 2399
AsuNHI	GCTAGC	1 cut(s)	754
AvaI	CYCGRG	3 cut(s)	1223, 1273, 2057
AvaII	GGWCC	3 cut(s)	857, 1473, 1488
AvrII	CCTAGG	2 cut(s)	1181, 2074
BaeGI	GKGCMC	2 cut(s)	121, 1628
BaeI	ACNNNNGTAYC	2 cut(s)	2187, 2220
BanI	GGYRCC	1 cut(s)	116
BanII	GRGCYC	3 cut(s)	1400, 1923, 2058
BauI	CACGAG	2 cut(s)	1768, 2480
BbsI	GAAGAC	2 cut(s)	954, 1781
Bbv12I	GWGCWC	2 cut(s)	1923, 2058
BbvI	GCAGC	3 cut(s)	1211, 1626, 2105
BccI	CCATC	8 cut(s)	86, 127, 248, 1513, 1810, 1831, 2123, 2495
BceAI	ACGGC	5 cut(s)	399, 524, 724, 1969, 2512
BcgI	CGANNNNNNTGC	4 cut(s)	175, 209, 1856, 1890
BciT130I	CCWGG	1 cut(s)	2509
BciVI	GTATCC	2 cut(s)	984, 2605
BclI	TGATCA	1 cut(s)	2547
BcnI	CCSGG	1 cut(s)	431
BcoDI	GTCTC	7 cut(s)	439, 922, 1090, 1141, 1153, 1349, 1639
BfmI	CTRYAG	1 cut(s)	1640
BfuI	GTATCC	2 cut(s)	984, 2605
BglI	GCCNNNNNGGC	2 cut(s)	1253, 2079
BisI	GCNGC	6 cut(s)	85, 427, 1200, 1640, 2080, 2094
BlnI	CCTAGG	2 cut(s)	1181, 2074
BlpI	GCTNAGC	2 cut(s)	464, 1917
BlsI	GCNGC	6 cut(s)	86, 428, 1201, 1641, 2081, 2095
BmcAI	AGTACT	1 cut(s)	2049
Bme1390I	CCNGG	2 cut(s)	431, 2509
Bme18I	GGWCC	3 cut(s)	857, 1473, 1488
BmeRI	GACNNNNNGTC	1 cut(s)	1133
BmeT110I	CYCGRG	3 cut(s)	1223, 1273, 2057
BmgT120I	GGNCC	7 cut(s)	265, 428, 857, 1219, 1473, 1488, 2592
BmiI	GGNNCC	8 cut(s)	118, 837, 1399, 1474, 1489, 1490, 2506, 2594
BmrFI	CCNGG	2 cut(s)	431, 2509
BmrI	ACTGGG	1 cut(s)	1974
BmsI	GCATC	5 cut(s)	867, 2117, 2161, 2449, 2485
BmtI	GCTAGC	1 cut(s)	758
BmuI	ACTGGG	1 cut(s)	1974
BpiI	GAAGAC	2 cut(s)	954, 1781
BplI	GAGNNNNNCTC	4 cut(s)	1290, 1322, 1905, 1937
Bpu1102I	GCTNAGC	2 cut(s)	464, 1917
BpuEI	CTTGAG	5 cut(s)	566, 834, 1001, 1428, 2072
BpuMI	CCSGG	1 cut(s)	431
BsaBI	GATNNNNATC	2 cut(s)	2133, 2616
BsaHI	GRCGYC	3 cut(s)	1241, 1755, 1842
BsaI	GGTCTC	2 cut(s)	439, 1349
BsaJI	CCNNGG	8 cut(s)	424, 1181, 1222, 1236, 1329, 1392, 2074, 2355
BsaWI	WCCGGW	3 cut(s)	610, 1686, 1727
Bse118I	RCCGGY	2 cut(s)	595, 1252
Bse1I	ACTGG	4 cut(s)	332, 1030, 1322, 1969
Bse3DI	GCAATG	2 cut(s)	1554, 2579
Bse8I	GATNNNNATC	2 cut(s)	2133, 2616
BseBI	CCWGG	1 cut(s)	2509
BseDI	CCNNGG	8 cut(s)	424, 1181, 1222, 1236, 1329, 1392, 2074, 2355
BseGI	GGATG	6 cut(s)	240, 381, 506, 916, 1377, 1802
BseJI	GATNNNNATC	2 cut(s)	2133, 2616
BseMI	GCAATG	2 cut(s)	1554, 2579
BseMII	CTCAG	4 cut(s)	450, 1908, 1936, 2094
BseNI	ACTGG	4 cut(s)	332, 1030, 1322, 1969
BseRI	GAGGAG	3 cut(s)	1295, 1703, 2498
BseSI	GKGCMC	2 cut(s)	121, 1628
BseXI	GCAGC	3 cut(s)	1211, 1626, 2105
BseYI	CCCAGC	2 cut(s)	46, 2338
BsgI	GTGCAG	2 cut(s)	915, 2269
Bsh1236I	CGCG	3 cut(s)	16, 426, 2024
Bsh1285I	CGRYCG	1 cut(s)	223
BshNI	GGYRCC	1 cut(s)	116
BsiEI	CGRYCG	1 cut(s)	223
BsiHKAI	GWGCWC	2 cut(s)	1923, 2058
BsiHKCI	CYCGRG	3 cut(s)	1223, 1273, 2057
BslFI	GGGAC	5 cut(s)	530, 1036, 1074, 1474, 1486
BsmAI	GTCTC	7 cut(s)	439, 922, 1090, 1141, 1153, 1349, 1639
BsmFI	GGGAC	5 cut(s)	530, 1036, 1074, 1474, 1486
BsmI	GAATGC	2 cut(s)	191, 1201
Bso31I	GGTCTC	2 cut(s)	439, 1349
BsoBI	CYCGRG	3 cut(s)	1223, 1273, 2057
Bsp1286I	GDGCHC	5 cut(s)	121, 1400, 1628, 1923, 2058
Bsp1407I	TGTACA	3 cut(s)	780, 1365, 2576
Bsp143I	GATC	7 cut(s)	220, 715, 1797, 2263, 2527, 2547, 2617
Bsp1720I	GCTNAGC	2 cut(s)	464, 1917
Bsp19I	CCATGG	1 cut(s)	1236
Bsp68I	TCGCGA	1 cut(s)	16
BspCNI	CTCAG	4 cut(s)	449, 1909, 1935, 2095
BspFNI	CGCG	3 cut(s)	16, 426, 2024
BspHI	TCATGA	1 cut(s)	1038
BspLI	GGNNCC	8 cut(s)	118, 837, 1399, 1474, 1489, 1490, 2506, 2594
BspMAI	CTGCAG	1 cut(s)	1644
BspOI	GCTAGC	1 cut(s)	758
BspPI	GGATC	3 cut(s)	1792, 2535, 2612
BspT107I	GGYRCC	1 cut(s)	116
BspTNI	GGTCTC	2 cut(s)	439, 1349
BsrDI	GCAATG	2 cut(s)	1554, 2579
BsrFI	RCCGGY	2 cut(s)	595, 1252
BsrGI	TGTACA	3 cut(s)	780, 1365, 2576
BsrI	ACTGG	4 cut(s)	332, 1030, 1322, 1969
BssAI	RCCGGY	2 cut(s)	595, 1252
BssECI	CCNNGG	8 cut(s)	424, 1181, 1222, 1236, 1329, 1392, 2074, 2355
BssMI	GATC	7 cut(s)	220, 715, 1797, 2263, 2527, 2547, 2617
BssNI	GRCGYC	3 cut(s)	1241, 1755, 1842
BssSI	CACGAG	2 cut(s)	1768, 2480
BssT1I	CCWWGG	4 cut(s)	1181, 1236, 1392, 2074
Bst2BI	CACGAG	2 cut(s)	1768, 2480
Bst2UI	CCWGG	1 cut(s)	2509
Bst4CI	ACNGT	5 cut(s)	365, 1318, 1453, 1669, 1849
Bst6I	CTCTTC	6 cut(s)	324, 506, 533, 920, 1412, 1986
BstACI	GRCGYC	3 cut(s)	1241, 1755, 1842
BstAUI	TGTACA	3 cut(s)	780, 1365, 2576
BstDEI	CTNAG	7 cut(s)	436, 464, 1917, 1922, 2103, 2395, 2407
BstDSI	CCRYGG	2 cut(s)	424, 1236
BstENI	CCTNNNNNAGG	1 cut(s)	1464
BstF5I	GGATG	6 cut(s)	240, 381, 506, 916, 1377, 1802
BstFNI	CGCG	3 cut(s)	16, 426, 2024
BstKTI	GATC	7 cut(s)	223, 718, 1800, 2266, 2530, 2550, 2620
BstMAI	GTCTC	7 cut(s)	439, 922, 1090, 1141, 1153, 1349, 1639
BstMBI	GATC	7 cut(s)	220, 715, 1797, 2263, 2527, 2547, 2617
BstMCI	CGRYCG	1 cut(s)	223
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 877, 1253, 1636, 2079
BstNI	CCWGG	1 cut(s)	2509
BstNSI	RCATGY	6 cut(s)	402, 697, 1504, 1537, 1583, 2032
BstSCI	CCNGG	2 cut(s)	429, 2507
BstSFI	CTRYAG	1 cut(s)	1640
BstSLI	GKGCMC	2 cut(s)	121, 1628
BstUI	CGCG	3 cut(s)	16, 426, 2024
BstV1I	GCAGC	3 cut(s)	1211, 1626, 2105
BstV2I	GAAGAC	2 cut(s)	954, 1781
BstX2I	RGATCY	1 cut(s)	2617
BstYI	RGATCY	1 cut(s)	2617
BsuI	GTATCC	2 cut(s)	984, 2605
BtgI	CCRYGG	2 cut(s)	424, 1236
BtgZI	GCGATG	2 cut(s)	1795, 2514
BtsCI	GGATG	6 cut(s)	240, 381, 506, 916, 1377, 1802
BtsI	GCAGTG	3 cut(s)	393, 1492, 2530
BtsIMutI	CAGTG	6 cut(s)	393, 1492, 1930, 1962, 1985, 2530
BtuMI	TCGCGA	1 cut(s)	16
CaiI	CAGNNNCTG	1 cut(s)	1648
CciI	TCATGA	1 cut(s)	1038
Cfr10I	RCCGGY	2 cut(s)	595, 1252
Cfr13I	GGNCC	7 cut(s)	265, 428, 857, 1219, 1473, 1488, 2592
Cfr42I	CCGCGG	1 cut(s)	427
CpoI	CGGWCCG	1 cut(s)	857
CseI	GACGC	4 cut(s)	1137, 1230, 1744, 1789
Csp6I	GTAC	8 cut(s)	366, 773, 781, 1366, 1948, 2048, 2196, 2577
CspCI	CAANNNNNGTGG	4 cut(s)	1465, 1500, 2407, 2442
CspI	CGGWCCG	1 cut(s)	857
CviQI	GTAC	8 cut(s)	366, 773, 781, 1366, 1948, 2048, 2196, 2577
DdeI	CTNAG	7 cut(s)	436, 464, 1917, 1922, 2103, 2395, 2407
DpnI	GATC	7 cut(s)	222, 717, 1799, 2265, 2529, 2549, 2619
DpnII	GATC	7 cut(s)	220, 715, 1797, 2263, 2527, 2547, 2617
DrdI	GACNNNNNNGTC	1 cut(s)	1847
DriI	GACNNNNNGTC	1 cut(s)	1133
DseDI	GACNNNNNNGTC	1 cut(s)	1847
EaeI	YGGCCR	2 cut(s)	709, 1982
Eam1104I	CTCTTC	6 cut(s)	324, 506, 533, 920, 1412, 1986
Eam1105I	GACNNNNNGTC	1 cut(s)	1133
EarI	CTCTTC	6 cut(s)	324, 506, 533, 920, 1412, 1986
EciI	GGCGGA	1 cut(s)	226
Ecl136II	GAGCTC	2 cut(s)	1921, 2056
Eco130I	CCWWGG	4 cut(s)	1181, 1236, 1392, 2074
Eco24I	GRGCYC	3 cut(s)	1400, 1923, 2058
Eco31I	GGTCTC	2 cut(s)	439, 1349
Eco47I	GGWCC	3 cut(s)	857, 1473, 1488
Eco53kI	GAGCTC	2 cut(s)	1921, 2056
Eco57I	CTGAAG	1 cut(s)	2356
Eco88I	CYCGRG	3 cut(s)	1223, 1273, 2057
EcoICRI	GAGCTC	2 cut(s)	1921, 2056
EcoNI	CCTNNNNNAGG	1 cut(s)	1464
EcoO109I	RGGNCCY	2 cut(s)	265, 1488
EcoRI	GAATTC	1 cut(s)	2300
EcoRII	CCWGG	1 cut(s)	2507
EcoT14I	CCWWGG	4 cut(s)	1181, 1236, 1392, 2074
EcoT22I	ATGCAT	1 cut(s)	404
EcoT38I	GRGCYC	3 cut(s)	1400, 1923, 2058
ErhI	CCWWGG	4 cut(s)	1181, 1236, 1392, 2074
FalI	AAGNNNNNCTT	2 cut(s)	1983, 2015
FaqI	GGGAC	5 cut(s)	530, 1036, 1074, 1474, 1486
FauI	CCCGC	2 cut(s)	600, 1635
FbaI	TGATCA	1 cut(s)	2547
FblI	GTMKAC	1 cut(s)	1434
Fnu4HI	GCNGC	6 cut(s)	85, 427, 1200, 1640, 2080, 2094
FokI	GGATG	6 cut(s)	227, 388, 493, 923, 1364, 1789
FriOI	GRGCYC	3 cut(s)	1400, 1923, 2058
Fsp4HI	GCNGC	6 cut(s)	85, 427, 1200, 1640, 2080, 2094
GluI	GCNGC	6 cut(s)	85, 427, 1200, 1640, 2080, 2094
GsaI	CCCAGC	2 cut(s)	50, 2342
HgaI	GACGC	4 cut(s)	1137, 1230, 1744, 1789
Hin1I	GRCGYC	3 cut(s)	1241, 1755, 1842
HincII	GTYRAC	1 cut(s)	1909
HindII	GTYRAC	1 cut(s)	1909
HindIII	AAGCTT	2 cut(s)	1674, 1883
HphI	GGTGA	4 cut(s)	934, 1300, 1837, 2399
Hpy166II	GTNNAC	4 cut(s)	773, 783, 1435, 1909
Hpy8I	GTNNAC	4 cut(s)	773, 783, 1435, 1909
Hpy99I	CGWCG	6 cut(s)	16, 1246, 1783, 1844, 1871, 1990
HpyAV	CCTTC	3 cut(s)	1270, 1397, 1411
HpyCH4III	ACNGT	5 cut(s)	365, 1318, 1453, 1669, 1849
HpyCH4IV	ACGT	2 cut(s)	1554, 1842
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 877, 1253, 1636, 2079
HpyF3I	CTNAG	7 cut(s)	436, 464, 1917, 1922, 2103, 2395, 2407
HpySE526I	ACGT	2 cut(s)	1554, 1842
Hsp92I	GRCGYC	3 cut(s)	1241, 1755, 1842
KflI	GGGWCCC	1 cut(s)	1488
KroI	GCCGGC	2 cut(s)	595, 1252
KroNI	GCCGGC	2 cut(s)	597, 1254
Ksp22I	TGATCA	1 cut(s)	2547
KspI	CCGCGG	1 cut(s)	427
Kzo9I	GATC	7 cut(s)	220, 715, 1797, 2263, 2527, 2547, 2617
LmnI	GCTCC	4 cut(s)	254, 1333, 1403, 1838
Lsp1109I	GCAGC	3 cut(s)	1211, 1626, 2105
LweI	GCATC	5 cut(s)	867, 2117, 2161, 2449, 2485
MaeII	ACGT	2 cut(s)	1554, 1842
MaeIII	GTNAC	9 cut(s)	55, 394, 1098, 1292, 1843, 1925, 2098, 2279, 2387
MalI	GATC	7 cut(s)	222, 717, 1799, 2265, 2529, 2549, 2619
MboI	GATC	7 cut(s)	220, 715, 1797, 2263, 2527, 2547, 2617
MflI	RGATCY	1 cut(s)	2617
MhlI	GDGCHC	5 cut(s)	121, 1400, 1628, 1923, 2058
MlyI	GAGTC	6 cut(s)	142, 1285, 1308, 1865, 2011, 2384
MmeI	TCCRAC	6 cut(s)	129, 232, 718, 835, 1264, 1968
Mph1103I	ATGCAT	1 cut(s)	404
MroNI	GCCGGC	2 cut(s)	595, 1252
MroXI	GAANNNNTTC	1 cut(s)	1995
MseI	TTAA	4 cut(s)	653, 831, 903, 2295
MslI	CAYNNNNRTG	8 cut(s)	344, 386, 711, 905, 1094, 1235, 1505, 1584
MspA1I	CMGCKG	3 cut(s)	84, 426, 2096
MspR9I	CCNGG	2 cut(s)	431, 2509
Mva1269I	GAATGC	2 cut(s)	191, 1201
MvaI	CCWGG	1 cut(s)	2509
MvnI	CGCG	3 cut(s)	16, 426, 2024
MwoI	GCNNNNNNNGC	5 cut(s)	32, 877, 1253, 1636, 2079
NaeI	GCCGGC	2 cut(s)	597, 1254
NciI	CCSGG	1 cut(s)	431
NcoI	CCATGG	1 cut(s)	1236
NdeII	GATC	7 cut(s)	220, 715, 1797, 2263, 2527, 2547, 2617
NgoMIV	GCCGGC	2 cut(s)	595, 1252
NheI	GCTAGC	1 cut(s)	754
NlaIV	GGNNCC	8 cut(s)	118, 837, 1399, 1474, 1489, 1490, 2506, 2594
NmuCI	GTSAC	7 cut(s)	55, 394, 1098, 1843, 1925, 2279, 2387
NruI	TCGCGA	1 cut(s)	16
NsiI	ATGCAT	1 cut(s)	404
NspI	RCATGY	6 cut(s)	402, 697, 1504, 1537, 1583, 2032
OliI	CACNNNNGTG	1 cut(s)	386
PaeR7I	CTCGAG	1 cut(s)	1273
PagI	TCATGA	1 cut(s)	1038
PciI	ACATGT	2 cut(s)	693, 2028
PcsI	WCGNNNNNNNCGW	1 cut(s)	1775
PctI	GAATGC	2 cut(s)	191, 1201
PdiI	GCCGGC	2 cut(s)	597, 1254
PdmI	GAANNNNTTC	1 cut(s)	1995
PfeI	GAWTC	8 cut(s)	309, 441, 1210, 1439, 1651, 1736, 2134, 2227
PflMI	CCANNNNNTGG	1 cut(s)	2589
PkrI	GCNGC	6 cut(s)	86, 428, 1201, 1641, 2081, 2095
Ple19I	CGATCG	1 cut(s)	223
PleI	GAGTC	6 cut(s)	142, 1284, 1307, 1865, 2011, 2384
PpsI	GAGTC	6 cut(s)	142, 1284, 1307, 1865, 2011, 2384
PpuMI	RGGWCCY	1 cut(s)	1488
PscI	ACATGT	2 cut(s)	693, 2028
Psp124BI	GAGCTC	2 cut(s)	1923, 2058
Psp5II	RGGWCCY	1 cut(s)	1488
Psp6I	CCWGG	1 cut(s)	2507
PspFI	CCCAGC	2 cut(s)	46, 2338
PspGI	CCWGG	1 cut(s)	2507
PspN4I	GGNNCC	8 cut(s)	118, 837, 1399, 1474, 1489, 1490, 2506, 2594
PspPI	GGNCC	7 cut(s)	265, 428, 857, 1219, 1473, 1488, 2592
PspPPI	RGGWCCY	1 cut(s)	1488
PspXI	VCTCGAGB	1 cut(s)	1273
PstI	CTGCAG	1 cut(s)	1644
PstNI	CAGNNNCTG	1 cut(s)	1648
PsuI	RGATCY	1 cut(s)	2617
PvuI	CGATCG	1 cut(s)	223
PvuII	CAGCTG	1 cut(s)	2096
RruI	TCGCGA	1 cut(s)	16
RsaI	GTAC	8 cut(s)	367, 774, 782, 1367, 1949, 2049, 2197, 2578
RsaNI	GTAC	8 cut(s)	366, 773, 781, 1366, 1948, 2048, 2196, 2577
RseI	CAYNNNNRTG	8 cut(s)	344, 386, 711, 905, 1094, 1235, 1505, 1584
Rsr2I	CGGWCCG	1 cut(s)	857
RsrII	CGGWCCG	1 cut(s)	857
SacI	GAGCTC	2 cut(s)	1923, 2058
SacII	CCGCGG	1 cut(s)	427
SaqAI	TTAA	4 cut(s)	653, 831, 903, 2295
SatI	GCNGC	6 cut(s)	85, 427, 1200, 1640, 2080, 2094
Sau3AI	GATC	7 cut(s)	220, 715, 1797, 2263, 2527, 2547, 2617
Sau96I	GGNCC	7 cut(s)	265, 428, 857, 1219, 1473, 1488, 2592
ScaI	AGTACT	1 cut(s)	2049
SchI	GAGTC	6 cut(s)	142, 1285, 1308, 1865, 2011, 2384
ScrFI	CCNGG	2 cut(s)	431, 2509
SduI	GDGCHC	5 cut(s)	121, 1400, 1628, 1923, 2058
SfaNI	GCATC	5 cut(s)	867, 2117, 2161, 2449, 2485
SfcI	CTRYAG	1 cut(s)	1640
Sfr274I	CTCGAG	1 cut(s)	1273
Sfr303I	CCGCGG	1 cut(s)	427
SgrBI	CCGCGG	1 cut(s)	427
SinI	GGWCC	3 cut(s)	857, 1473, 1488
SlaI	CTCGAG	1 cut(s)	1273
SmiMI	CAYNNNNRTG	8 cut(s)	344, 386, 711, 905, 1094, 1235, 1505, 1584
SmlI	CTYRAG	6 cut(s)	581, 849, 980, 1273, 1443, 2051
SmoI	CTYRAG	6 cut(s)	581, 849, 980, 1273, 1443, 2051
SspI	AATATT	2 cut(s)	1954, 2167
SstI	GAGCTC	2 cut(s)	1923, 2058
StyD4I	CCNGG	2 cut(s)	429, 2507
StyI	CCWWGG	4 cut(s)	1181, 1236, 1392, 2074
TaaI	ACNGT	5 cut(s)	365, 1318, 1453, 1669, 1849
TaiI	ACGT	2 cut(s)	1557, 1845
TaqI	TCGA	2 cut(s)	1274, 2039
TaqII	GACCGA	2 cut(s)	874, 1926
TatI	WGTACW	6 cut(s)	365, 780, 1365, 1947, 2047, 2576
TauI	GCSGC	3 cut(s)	87, 429, 2082
TfiI	GAWTC	8 cut(s)	309, 441, 1210, 1439, 1651, 1736, 2134, 2227
Tru1I	TTAA	4 cut(s)	653, 831, 903, 2295
Tru9I	TTAA	4 cut(s)	653, 831, 903, 2295
TscAI	CASTG	6 cut(s)	393, 1499, 1930, 1969, 1985, 2537
TseFI	GTSAC	7 cut(s)	55, 394, 1098, 1843, 1925, 2279, 2387
TseI	GCWGC	3 cut(s)	1199, 1639, 2093
Tsp45I	GTSAC	7 cut(s)	55, 394, 1098, 1843, 1925, 2279, 2387
TspDTI	ATGAA	5 cut(s)	392, 520, 1055, 1219, 2250
TspGWI	ACGGA	3 cut(s)	157, 1311, 1691
TspRI	CASTG	6 cut(s)	393, 1499, 1930, 1969, 1985, 2537
Van91I	CCANNNNNTGG	1 cut(s)	2589
VpaK11BI	GGWCC	3 cut(s)	857, 1473, 1488
XagI	CCTNNNNNAGG	1 cut(s)	1464
XapI	RAATTY	9 cut(s)	409, 521, 1695, 2238, 2258, 2300, 2322, 2330, 2466
XceI	RCATGY	6 cut(s)	402, 697, 1504, 1537, 1583, 2032
XhoI	CTCGAG	1 cut(s)	1273
XmaJI	CCTAGG	2 cut(s)	1181, 2074
XmiI	GTMKAC	1 cut(s)	1434
XmnI	GAANNNNTTC	1 cut(s)	1995
ZraI	GACGTC	1 cut(s)	1843
ZrmI	AGTACT	1 cut(s)	2049
Zsp2I	ATGCAT	1 cut(s)	404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.