Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003876

Physical Location & Seq

Genomic Coordinates Forward (+)

134483 .. 138074

Gene Structure 3592 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ21879

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGGTTTTGGTTTGGAGCGACCTTCTGTTTCATCAACCATCAAATGGCTTGGTTTCGTCACCGCCATTTGGGTCCAGGCCATTTCAGGCAACAACTACACTTTCTCCAACTACTCAGATGCTCTCAAAACCCTCATGAACCTCACCCAGCTCGAGCTCAACAACCTCTCCGTCGCCAAAGACGTCGGTAAAGCTTTCGGCCTCCTCGCTGGCCTCGCTTCCGACCGCTTCCCCACCTGGGTCCTCCTACTCATCGGCTCCGTCGAGGGCCTGGTCGGTTACGGAGCCCAGTGGCTCGTCGTCAGCCAAAAAATCCAACCCCTTTCGTACTGGCAGATGTGCATATTTCTTTGCATGGGAGGCAACAGCACGACGTGGATGAACACGGCCGTATTAGTGACGTGTATTCGGAACTTCCGGAGCAACCGAGGACCGGTCTCCGGCATTCTCAAAGGCTACGTGGGTCTGAGCACCGCCATATTCACCGACCTCTGCACCGCTCTGTTTAACGACAACTCGGGCAGCTTCCTGTTCATGCTCGCCGTCACTCCCTTCGCCGTCTGCCTCACCGCCATGGTCTTCCTCCATGAAATCCCTCCGTCGTCCTCCGCCGCCGAGGACAAGCAGGAGTCCAGATACTTCTGGTTCTTCAACGGCCTCGCCTTCTTCGTCGCCGTCTACCTCCTGGCTTACGACTTCATTCCAGACCCCTCCACGCTCTTCTCTCACGTCTTCTCCGCCATTCTCTTACTCCTCCTCGCTTCGCCGTTGGTGGTTCCGGCTTACTCATATTTCAAGTCGTGGGCCCCGAACCGGGTCGGGTCGTCGGATCCGGAAAAGCCGGTTGCGGTTTTGGTTCTGGACGAGCCGCTGCTGGCGGCGGGAAAGCCGGAGGTGGTTCCGTCGTCGTCGTCGTCGTCGGAGGATGACGTGGCGGTGGTGGAGAGGAGGAGGAGGCCGGTGATTGGAGAGGAGCACACAATTTTCGAGGCGATGAGGACTTTGGATTTCTGGATACTTTTTGTGTCGTTTCTGTGTGGGGTGGGGACTGGATTGGCGGTTATGAACAATTTGGGCCAGATTGGGCTGGCGCTTGGATACGCCGACGTTTCGATCTTCGTTTCGCTCACCAGTATTTGGGGTTTTTTCGGGCGAATCGTTTCGGGTATGGTTTCCGAGTATTTCATCAGGAAAGCGGCAATACCGAGGCCACTATGGAATGCAGCTTCTCAGATTCTAATGGCTGTTGGATACATACTCCTCGCCATTGCCATGCCTGGCTCCCTCTACATTGGTTCAATTGTGGTCGGAATCTGCTATGGAGTTCGTCTTGCTATCACAGTCCCAGCAGCATCTGAACTATTTGGTCTCAAATACTATGGGCTAATCTACAACGTTCTGATCCTCAATCTCCCACTTGGGTCCTTACTCTTCTCAGGCCTCCTTGCCGGGTTTTTATACGATATGGAGGCTACCCCAACGGCCGGAGGTGGCAACACCTGCATTGGGGCCCATTGTTACAGGCTTGTGTTTGTTGTCATGGCCATTGCCTGTGTTGTTGGGTTTGGTTTGGACATTTTGTTGTCCATCAGAACTAGGCGGCTTTACACGAAGATTCAAGCTGGCAAGAAAACAAAGAGAGTTTCTAATGGCACATCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nodulin-like

Protein Analysis

553

Amino Acids

59.99

Weight (kDa)

8.42

Isoelectric Point (pI)

30.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	15 - 260	4.3e-94	Nodulin-like
NFD4_C	PF23262	324 - 536	1.3e-33	NFD4, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003876)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16660 AT2G16660 AT4G34950
fragaria_vesca	FvH4_1g11700 FvH4_2g01480
malus_domestica	MD02G1130000.v1.1 MD05G1119300.v1.1 MD10G1122400.v1.1
prunus_persica	Prupe.7G169700_v2.0.a1 Prupe.8G163500_v2.0.a1
pyrus_communis	pycom02g10190 pycom05g11320 pycom05g11330 pycom10g10530
rosa_chinensis	RchiOBHm_Chr2g0099271 RchiOBHm_Chr6g0244111
rosa_laevigata	RLG00000015380 RLG00000016867
rosa_multiflora	Rmu_sc0001455.1_g000032 Rmu_sc0029692.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143260 Rroxscaffold_7G00216060
rosa_rugosa	Rorug02G0078300 Rorug05G0507500
rosa_samantha	Rh2AG127600 Rh2BG130600 Rh2CG131800 Rh2DG132300 Rh6AG022000 Rh6BG017700 Rh6CG014400 Rh6DG015600
rosa_wichuraiana	Rw2G009850 Rw6G001810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1508
AatII	GACGTC	1 cut(s)	186
Acc36I	ACCTGC	1 cut(s)	1508
AccB7I	CCANNNNNTGG	2 cut(s)	45, 1137
AccBSI	CCGCTC	1 cut(s)	500
AccI	GTMKAC	1 cut(s)	678
AccIII	TCCGGA	2 cut(s)	417, 832
AclI	AACGTT	1 cut(s)	1395
AclWI	GGATC	3 cut(s)	824, 837, 1396
AcoI	YGGCCR	3 cut(s)	387, 1482, 1542
AcyI	GRCGYC	1 cut(s)	183
AdeI	CACNNNGTG	1 cut(s)	375
AfaI	GTAC	1 cut(s)	329
AflIII	ACRYGT	1 cut(s)	401
AgeI	ACCGGT	1 cut(s)	433
AgsI	TTSAA	4 cut(s)	652, 796, 1299, 1619
AjiI	CACGTC	4 cut(s)	375, 402, 730, 931
AjnI	CCWGG	5 cut(s)	75, 236, 270, 684, 1276
AluBI	AGCT	6 cut(s)	151, 157, 194, 525, 1226, 1622
AluI	AGCT	6 cut(s)	151, 157, 194, 525, 1226, 1622
Alw21I	GWGCWC	3 cut(s)	159, 473, 978
Alw26I	GTCTC	2 cut(s)	442, 1373
AlwI	GGATC	3 cut(s)	824, 837, 1396
AlwNI	CAGNNNCTG	1 cut(s)	1355
Ama87I	CYCGRG	2 cut(s)	152, 517
Aor13HI	TCCGGA	2 cut(s)	417, 832
ApaI	GGGCCC	2 cut(s)	808, 1513
ApeKI	GCWGC	4 cut(s)	522, 871, 1223, 1349
AsiGI	ACCGGT	1 cut(s)	433
Asp700I	GAANNNNTTC	1 cut(s)	1159
AspLEI	GCGC	1 cut(s)	1093
AsuC2I	CCSGG	2 cut(s)	815, 1450
AsuHPI	GGTGA	6 cut(s)	52, 136, 475, 559, 973, 1120
AvaI	CYCGRG	2 cut(s)	152, 517
AvaII	GGWCC	4 cut(s)	73, 241, 431, 1422
BaeGI	GKGCMC	2 cut(s)	808, 1513
BalI	TGGCCA	1 cut(s)	1544
BamHI	GGATCC	1 cut(s)	829
BanII	GRGCYC	4 cut(s)	159, 289, 808, 1513
BbsI	GAAGAC	2 cut(s)	571, 724
Bbv12I	GWGCWC	3 cut(s)	159, 473, 978
BbvI	GCAGC	4 cut(s)	534, 858, 1235, 1361
BccI	CCATC	2 cut(s)	47, 1595
BceAI	ACGGC	8 cut(s)	374, 402, 527, 542, 659, 670, 751, 1497
BciT130I	CCWGG	5 cut(s)	77, 238, 272, 686, 1278
BciVI	GTATCC	3 cut(s)	1008, 1091, 1244
BcnI	CCSGG	2 cut(s)	815, 1450
BcoDI	GTCTC	2 cut(s)	442, 1373
BfaI	CTAG	1 cut(s)	1596
BfoI	RGCGCY	1 cut(s)	1094
BfuAI	ACCTGC	1 cut(s)	1508
BfuI	GTATCC	3 cut(s)	1008, 1091, 1244
BisI	GCNGC	9 cut(s)	523, 612, 869, 872, 879, 1197, 1224, 1350, 1601
BlsI	GCNGC	9 cut(s)	524, 613, 870, 873, 880, 1198, 1225, 1351, 1602
Bme1390I	CCNGG	7 cut(s)	77, 238, 272, 686, 815, 1278, 1450
Bme18I	GGWCC	4 cut(s)	73, 241, 431, 1422
BmeT110I	CYCGRG	2 cut(s)	152, 517
BmgBI	CACGTC	4 cut(s)	375, 402, 730, 931
BmrFI	CCNGG	7 cut(s)	77, 238, 272, 686, 815, 1278, 1450
BmrI	ACTGGG	1 cut(s)	283
BmsI	GCATC	2 cut(s)	109, 1361
BmuI	ACTGGG	1 cut(s)	283
BpiI	GAAGAC	2 cut(s)	571, 724
BpuMI	CCSGG	2 cut(s)	815, 1450
BsaAI	YACGTR	1 cut(s)	460
BsaHI	GRCGYC	1 cut(s)	183
BsaI	GGTCTC	2 cut(s)	442, 1373
BsaJI	CCNNGG	5 cut(s)	237, 427, 573, 615, 1205
BsaWI	WCCGGW	3 cut(s)	417, 433, 832
BsaXI	ACNNNNNCTCC	6 cut(s)	89, 119, 152, 182, 719, 749
Bse118I	RCCGGY	3 cut(s)	433, 841, 958
Bse1I	ACTGG	4 cut(s)	289, 335, 1054, 1131
Bse3DI	GCAATG	2 cut(s)	1266, 1545
BseAI	TCCGGA	2 cut(s)	417, 832
BseBI	CCWGG	5 cut(s)	77, 238, 272, 686, 1278
BseDI	CCNNGG	5 cut(s)	237, 427, 573, 615, 1205
BseGI	GGATG	2 cut(s)	384, 931
BseMI	GCAATG	2 cut(s)	1266, 1545
BseMII	CTCAG	4 cut(s)	129, 458, 1244, 1449
BseNI	ACTGG	4 cut(s)	289, 335, 1054, 1131
BseRI	GAGGAG	8 cut(s)	194, 743, 746, 961, 964, 967, 986, 1250
BseSI	GKGCMC	2 cut(s)	808, 1513
BseX3I	CGGCCG	2 cut(s)	387, 1482
BseXI	GCAGC	4 cut(s)	534, 858, 1235, 1361
BseYI	CCCAGC	2 cut(s)	147, 1345
BsgI	GTGCAG	1 cut(s)	478
Bsh1285I	CGRYCG	3 cut(s)	226, 390, 1485
BshTI	ACCGGT	1 cut(s)	433
BsiEI	CGRYCG	3 cut(s)	226, 390, 1485
BsiHKAI	GWGCWC	3 cut(s)	159, 473, 978
BsiHKCI	CYCGRG	2 cut(s)	152, 517
BslFI	GGGAC	2 cut(s)	1060, 1328
BsmAI	GTCTC	2 cut(s)	442, 1373
BsmFI	GGGAC	2 cut(s)	1060, 1328
BsmI	GAATGC	2 cut(s)	444, 1225
Bso31I	GGTCTC	2 cut(s)	442, 1373
BsoBI	CYCGRG	2 cut(s)	152, 517
Bsp120I	GGGCCC	2 cut(s)	804, 1509
Bsp1286I	GDGCHC	6 cut(s)	159, 289, 473, 808, 978, 1513
Bsp13I	TCCGGA	2 cut(s)	417, 832
Bsp143I	GATC	3 cut(s)	829, 1113, 1401
Bsp19I	CCATGG	1 cut(s)	573
BspCNI	CTCAG	4 cut(s)	128, 459, 1243, 1448
BspEI	TCCGGA	2 cut(s)	417, 832
BspHI	TCATGA	1 cut(s)	135
BspMI	ACCTGC	1 cut(s)	1508
BspPI	GGATC	3 cut(s)	824, 837, 1396
BspQI	GCTCTTC	1 cut(s)	725
BspTNI	GGTCTC	2 cut(s)	442, 1373
BsrBI	CCGCTC	1 cut(s)	500
BsrDI	GCAATG	2 cut(s)	1266, 1545
BsrFI	RCCGGY	3 cut(s)	433, 841, 958
BsrI	ACTGG	4 cut(s)	289, 335, 1054, 1131
BssAI	RCCGGY	3 cut(s)	433, 841, 958
BssECI	CCNNGG	5 cut(s)	237, 427, 573, 615, 1205
BssMI	GATC	3 cut(s)	829, 1113, 1401
BssNI	GRCGYC	1 cut(s)	183
BssT1I	CCWWGG	1 cut(s)	573
Bst2UI	CCWGG	5 cut(s)	77, 238, 272, 686, 1278
Bst4CI	ACNGT	1 cut(s)	1342
Bst6I	CTCTTC	2 cut(s)	725, 1436
BstACI	GRCGYC	1 cut(s)	183
BstAPI	GCANNNNNTGC	1 cut(s)	1500
BstBAI	YACGTR	1 cut(s)	460
BstC8I	GCNNGC	5 cut(s)	211, 540, 876, 1089, 1624
BstDEI	CTNAG	4 cut(s)	115, 467, 1230, 1435
BstDSI	CCRYGG	1 cut(s)	573
BstF5I	GGATG	2 cut(s)	384, 931
BstH2I	RGCGCY	1 cut(s)	1094
BstHHI	GCGC	1 cut(s)	1093
BstKTI	GATC	3 cut(s)	832, 1116, 1404
BstMAI	GTCTC	2 cut(s)	442, 1373
BstMBI	GATC	3 cut(s)	829, 1113, 1401
BstMCI	CGRYCG	3 cut(s)	226, 390, 1485
BstMWI	GCNNNNNNNGC	3 cut(s)	215, 360, 1500
BstNI	CCWGG	5 cut(s)	77, 238, 272, 686, 1278
BstSCI	CCNGG	7 cut(s)	75, 236, 270, 684, 813, 1276, 1448
BstSLI	GKGCMC	2 cut(s)	808, 1513
BstV1I	GCAGC	4 cut(s)	534, 858, 1235, 1361
BstV2I	GAAGAC	2 cut(s)	571, 724
BstX2I	RGATCY	1 cut(s)	829
BstYI	RGATCY	1 cut(s)	829
BstZI	CGGCCG	2 cut(s)	387, 1482
BsuI	GTATCC	3 cut(s)	1008, 1091, 1244
BtgI	CCRYGG	1 cut(s)	573
BtgZI	GCGATG	1 cut(s)	1007
BtrI	CACGTC	4 cut(s)	375, 402, 730, 931
BtsCI	GGATG	2 cut(s)	384, 931
BtsIMutI	CAGTG	1 cut(s)	296
BveI	ACCTGC	1 cut(s)	1508
Cac8I	GCNNGC	5 cut(s)	211, 540, 876, 1089, 1624
CaiI	CAGNNNCTG	1 cut(s)	1355
CciI	TCATGA	1 cut(s)	135
CfoI	GCGC	1 cut(s)	1093
Cfr10I	RCCGGY	3 cut(s)	433, 841, 958
Csp6I	GTAC	1 cut(s)	328
CspAI	ACCGGT	1 cut(s)	433
CviAII	CATG	7 cut(s)	136, 355, 535, 574, 587, 1273, 1540
CviQI	GTAC	1 cut(s)	328
DdeI	CTNAG	4 cut(s)	115, 467, 1230, 1435
DpnI	GATC	3 cut(s)	831, 1115, 1403
DpnII	GATC	3 cut(s)	829, 1113, 1401
DraIII	CACNNNGTG	1 cut(s)	375
EaeI	YGGCCR	3 cut(s)	387, 1482, 1542
EagI	CGGCCG	2 cut(s)	387, 1482
Eam1104I	CTCTTC	2 cut(s)	725, 1436
EarI	CTCTTC	2 cut(s)	725, 1436
EciI	GGCGGA	2 cut(s)	598, 727
Ecl136II	GAGCTC	1 cut(s)	157
EclXI	CGGCCG	2 cut(s)	387, 1482
Eco130I	CCWWGG	1 cut(s)	573
Eco147I	AGGCCT	1 cut(s)	1440
Eco24I	GRGCYC	4 cut(s)	159, 289, 808, 1513
Eco31I	GGTCTC	2 cut(s)	442, 1373
Eco47I	GGWCC	4 cut(s)	73, 241, 431, 1422
Eco52I	CGGCCG	2 cut(s)	387, 1482
Eco53kI	GAGCTC	1 cut(s)	157
Eco88I	CYCGRG	2 cut(s)	152, 517
EcoICRI	GAGCTC	1 cut(s)	157
EcoO109I	RGGNCCY	5 cut(s)	241, 268, 805, 1422, 1509
EcoRII	CCWGG	5 cut(s)	75, 236, 270, 684, 1276
EcoT14I	CCWWGG	1 cut(s)	573
EcoT38I	GRGCYC	4 cut(s)	159, 289, 808, 1513
ErhI	CCWWGG	1 cut(s)	573
FaeI	CATG	7 cut(s)	139, 358, 538, 577, 590, 1276, 1543
FaqI	GGGAC	2 cut(s)	1060, 1328
FatI	CATG	7 cut(s)	135, 354, 534, 573, 586, 1272, 1539
FauI	CCCGC	1 cut(s)	874
FblI	GTMKAC	1 cut(s)	678
Fnu4HI	GCNGC	9 cut(s)	523, 612, 869, 872, 879, 1197, 1224, 1350, 1601
FokI	GGATG	2 cut(s)	391, 938
FriOI	GRGCYC	4 cut(s)	159, 289, 808, 1513
Fsp4HI	GCNGC	9 cut(s)	523, 612, 869, 872, 879, 1197, 1224, 1350, 1601
FspBI	CTAG	1 cut(s)	1596
GlaI	GCGC	1 cut(s)	1092
GluI	GCNGC	9 cut(s)	523, 612, 869, 872, 879, 1197, 1224, 1350, 1601
GsaI	CCCAGC	2 cut(s)	151, 1349
HaeII	RGCGCY	1 cut(s)	1094
HhaI	GCGC	1 cut(s)	1093
Hin1I	GRCGYC	1 cut(s)	183
Hin1II	CATG	7 cut(s)	139, 358, 538, 577, 590, 1276, 1543
Hin6I	GCGC	1 cut(s)	1091
HinP1I	GCGC	1 cut(s)	1091
HindIII	AAGCTT	1 cut(s)	192
HinfI	GANTC	5 cut(s)	629, 1155, 1234, 1311, 1615
HphI	GGTGA	6 cut(s)	52, 136, 475, 559, 973, 1120
Hpy166II	GTNNAC	1 cut(s)	679
Hpy188III	TCNNGA	8 cut(s)	136, 418, 633, 704, 833, 860, 1012, 1189
Hpy8I	GTNNAC	1 cut(s)	679
HpyAV	CCTTC	3 cut(s)	33, 562, 673
HpyCH4III	ACNGT	1 cut(s)	1342
HpyCH4IV	ACGT	8 cut(s)	183, 374, 401, 459, 729, 930, 1107, 1395
HpyCH4V	TGCA	5 cut(s)	342, 354, 495, 1223, 1503
HpyF10VI	GCNNNNNNNGC	3 cut(s)	215, 360, 1500
HpyF3I	CTNAG	4 cut(s)	115, 467, 1230, 1435
HpySE526I	ACGT	8 cut(s)	183, 374, 401, 459, 729, 930, 1107, 1395
Hsp92I	GRCGYC	1 cut(s)	183
Hsp92II	CATG	7 cut(s)	139, 358, 538, 577, 590, 1276, 1543
HspAI	GCGC	1 cut(s)	1091
Kpn2I	TCCGGA	2 cut(s)	417, 832
Kzo9I	GATC	3 cut(s)	829, 1113, 1401
LguI	GCTCTTC	1 cut(s)	725
LmnI	GCTCC	6 cut(s)	16, 263, 284, 420, 973, 1286
Lsp1109I	GCAGC	4 cut(s)	534, 858, 1235, 1361
LweI	GCATC	2 cut(s)	109, 1361
MaeI	CTAG	1 cut(s)	1596
MaeII	ACGT	8 cut(s)	183, 374, 401, 459, 729, 930, 1107, 1395
MaeIII	GTNAC	5 cut(s)	58, 278, 397, 544, 1517
MalI	GATC	3 cut(s)	831, 1115, 1403
MbiI	CCGCTC	1 cut(s)	500
MboI	GATC	3 cut(s)	829, 1113, 1401
MboII	GAAGA	8 cut(s)	571, 640, 658, 712, 724, 1108, 1423, 1624
MfeI	CAATTG	1 cut(s)	1299
MflI	RGATCY	1 cut(s)	829
MhlI	GDGCHC	6 cut(s)	159, 289, 473, 808, 978, 1513
MlsI	TGGCCA	1 cut(s)	1544
MluCI	AATT	3 cut(s)	981, 1069, 1299
MluNI	TGGCCA	1 cut(s)	1544
MlyI	GAGTC	1 cut(s)	638
MmeI	TCCRAC	7 cut(s)	132, 246, 340, 807, 900, 1228, 1288
Mox20I	TGGCCA	1 cut(s)	1544
MroI	TCCGGA	2 cut(s)	417, 832
MroXI	GAANNNNTTC	1 cut(s)	1159
MscI	TGGCCA	1 cut(s)	1544
MseI	TTAA	1 cut(s)	507
MslI	CAYNNNNRTG	2 cut(s)	572, 1271
Msp20I	TGGCCA	1 cut(s)	1544
MspA1I	CMGCKG	1 cut(s)	871
MspR9I	CCNGG	7 cut(s)	77, 238, 272, 686, 815, 1278, 1450
MunI	CAATTG	1 cut(s)	1299
Mva1269I	GAATGC	2 cut(s)	444, 1225
MvaI	CCWGG	5 cut(s)	77, 238, 272, 686, 1278
MwoI	GCNNNNNNNGC	3 cut(s)	215, 360, 1500
NciI	CCSGG	2 cut(s)	815, 1450
NcoI	CCATGG	1 cut(s)	573
NdeII	GATC	3 cut(s)	829, 1113, 1401
NlaIII	CATG	7 cut(s)	139, 358, 538, 577, 590, 1276, 1543
NmeAIII	GCCGAG	1 cut(s)	640
NmuCI	GTSAC	3 cut(s)	58, 397, 544
PaeR7I	CTCGAG	1 cut(s)	152
PagI	TCATGA	1 cut(s)	135
PaqCI	CACCTGC	1 cut(s)	1508
PceI	AGGCCT	1 cut(s)	1440
PciSI	GCTCTTC	1 cut(s)	725
PcsI	WCGNNNNNNNCGW	7 cut(s)	180, 261, 666, 806, 911, 914, 1155
PctI	GAATGC	2 cut(s)	444, 1225
PdmI	GAANNNNTTC	1 cut(s)	1159
PfeI	GAWTC	4 cut(s)	1155, 1234, 1311, 1615
PflMI	CCANNNNNTGG	2 cut(s)	45, 1137
PinAI	ACCGGT	1 cut(s)	433
PkrI	GCNGC	9 cut(s)	524, 613, 870, 873, 880, 1198, 1225, 1351, 1602
PleI	GAGTC	1 cut(s)	637
PpsI	GAGTC	1 cut(s)	637
Ppu21I	YACGTR	1 cut(s)	460
PpuMI	RGGWCCY	2 cut(s)	241, 1422
Psp124BI	GAGCTC	1 cut(s)	159
Psp1406I	AACGTT	1 cut(s)	1395
Psp5II	RGGWCCY	2 cut(s)	241, 1422
Psp6I	CCWGG	5 cut(s)	75, 236, 270, 684, 1276
PspFI	CCCAGC	2 cut(s)	147, 1345
PspGI	CCWGG	5 cut(s)	75, 236, 270, 684, 1276
PspOMI	GGGCCC	2 cut(s)	804, 1509
PspPPI	RGGWCCY	2 cut(s)	241, 1422
PspXI	VCTCGAGB	1 cut(s)	152
PstNI	CAGNNNCTG	1 cut(s)	1355
PsuI	RGATCY	1 cut(s)	829
RsaI	GTAC	1 cut(s)	329
RsaNI	GTAC	1 cut(s)	328
RseI	CAYNNNNRTG	2 cut(s)	572, 1271
SacI	GAGCTC	1 cut(s)	159
SapI	GCTCTTC	1 cut(s)	725
SaqAI	TTAA	1 cut(s)	507
SatI	GCNGC	9 cut(s)	523, 612, 869, 872, 879, 1197, 1224, 1350, 1601
Sau3AI	GATC	3 cut(s)	829, 1113, 1401
SchI	GAGTC	1 cut(s)	638
ScrFI	CCNGG	7 cut(s)	77, 238, 272, 686, 815, 1278, 1450
SduI	GDGCHC	6 cut(s)	159, 289, 473, 808, 978, 1513
SfaNI	GCATC	2 cut(s)	109, 1361
Sfr274I	CTCGAG	1 cut(s)	152
SinI	GGWCC	4 cut(s)	73, 241, 431, 1422
SlaI	CTCGAG	1 cut(s)	152
SmiMI	CAYNNNNRTG	2 cut(s)	572, 1271
SmlI	CTYRAG	1 cut(s)	152
SmoI	CTYRAG	1 cut(s)	152
Sse9I	AATT	3 cut(s)	981, 1069, 1299
SseBI	AGGCCT	1 cut(s)	1440
SspMI	CTAG	1 cut(s)	1596
SstI	GAGCTC	1 cut(s)	159
StuI	AGGCCT	1 cut(s)	1440
StyD4I	CCNGG	7 cut(s)	75, 236, 270, 684, 813, 1276, 1448
StyI	CCWWGG	1 cut(s)	573
TaaI	ACNGT	1 cut(s)	1342
TaiI	ACGT	8 cut(s)	186, 377, 404, 462, 732, 933, 1110, 1398
TaqI	TCGA	4 cut(s)	153, 264, 987, 1112
TasI	AATT	3 cut(s)	981, 1069, 1299
TauI	GCSGC	5 cut(s)	614, 871, 881, 1199, 1603
TfiI	GAWTC	4 cut(s)	1155, 1234, 1311, 1615
Tru1I	TTAA	1 cut(s)	507
Tru9I	TTAA	1 cut(s)	507
TscAI	CASTG	1 cut(s)	296
TseFI	GTSAC	3 cut(s)	58, 397, 544
TseI	GCWGC	4 cut(s)	522, 871, 1223, 1349
Tsp45I	GTSAC	3 cut(s)	58, 397, 544
TspDTI	ATGAA	8 cut(s)	21, 152, 395, 523, 603, 688, 1079, 1174
TspGWI	ACGGA	5 cut(s)	160, 250, 297, 588, 891
TspRI	CASTG	1 cut(s)	296
Van91I	CCANNNNNTGG	2 cut(s)	45, 1137
VpaK11BI	GGWCC	4 cut(s)	73, 241, 431, 1422
XhoI	CTCGAG	1 cut(s)	152
XmiI	GTMKAC	1 cut(s)	678
XmnI	GAANNNNTTC	1 cut(s)	1159
XspI	CTAG	1 cut(s)	1596
ZraI	GACGTC	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.