Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0003876

Physical Location & Seq

Genomic Coordinates Reverse (-)

65301275 .. 65304594

Gene Structure 3320 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015380

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGGTTTTGGTTTGGAGCGACCTTCTGTTTCATCAACCATCAAATGGCTTGGTTTCGTCACCGCCATTTGGGTCCAGTCCATTTCAGGCAACAACTACACTTTCTCCAACTACTCCGATGCTCTCAAAACCCTCATGAACCTCACCCAGCTCGAGCTCAACAACCTCTCCGTCGCCAAAGACGTCGGTAAAGCTTTCGGCCTCCTCGCCGGCCTCGCTTCCGACCGTTTCCCCACCTGGGTCCTCCTACTCATCGGCTCCGTCGAGGGCTTGATCGGTTACGGCGCCCAGTGGCTCGTTGTCAGCCAAAAAATTCAACCCCTTTCGTACTGGCAGATGTGTATATTTCTTTGCATGGGAGGCAACAGCACCACGTGGATGAACACGGCCGTATTAGTGACGTGTATTCGGAACTTCCGGAGCAACCGAGGACCGGTCTCCGGCATTCTCAAAGGCTACGTGGGTCTGAGCACCGCCATATTCACCGACCTCTGCGCCGCTCTGTTTAACGACAACTCGGCCAGTTTCCTGTTCATGCTCGCCGTCACTCCCTTCGCAGTCTGCCTCACCGCCATGGTCTTCCTCCATGAAATCCCTCCGTCGTCCTCCGCCGCCGAGGACAAGCAGGAGTCCAGATACTTCTGGTTCTTCAACGGCCTCGCCTTCTTCGTCGCCCTCTACCTGTTGGCTTACGACTTCATTCCAGACCCCTCCACGCTCTTCTCTCACGTCTTCTCCGCCACTCTCTTACTCCTCCTCGCTTCGCCGTTGGTGGTTCCGGCTTTCTCTTATTTCAACGCGCGGGCCTCGAACCGGGTCGGGTCGTCGGATCCGGAAAAGCCGGTTCCGGTTTTGGTTCTGGACGAGCCGCTGCTGGCGGCGAAAAAGCCGGAGGTGGTTCCGTCGTCGTCGTCATCGGAGGATGACGTGGCGGTGGTGGAGAGGAGGAGGAGACCGGTGATTGGAGAGGAGCACACAATTTTCGAGGCGATGAGGACGTTGGATTTCTGGATACTTTTTGTGTCGTTTTTGTGTGGGGTGGGGACTGGATTGGCGGTTATGAACAATTTGGGCCAGATTGGGCTGGCGCTTGGATACGCCGACGTTTCGATCTTCGTTTCGCTCACCAGTATTTGGGGTTTTTTCGGGCGAATCGTTTCGGGTATGGTTTCCGAGTATTTCATCAGGAAAGCGGCAATACCGAGACCACTATGGAATGCAGCTTCTCAGATTCTAATGGCTGTTGGATACATACTCCTCGCCATTGCCATGCCTGGCTCCCTCTACATTGGTTCAATTGTGGTCGGAATCTGCTATGGAGTTCGTCTTGCTATCACAGTCCCAGCAGCATCTGAACTATTTGGTCTCAAATACTATGGGCTTATCTACAACGTTCTGATCCTCAATCTCCCACTTGGGTCCTTGCTCTTCTCAGGCCTCCTTGCCGGGTTTTTATACGATATGGAGGCTACCCCAACGGCCGGAGGTGGCAACACCTGCATTGGGGCCCATTGTTACAGGCTTGTGTTTGTTGTCATGGCCCTTGCCTGTGTTGTTGGGTTTGGTTTGGACATTTTGTTGTCCATCAGAACTAAGCGGCTTTACACGAAGATTCAAGCTGGCAAGAAAACAAAGAGAGTTTCTAATGGCACATCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nodulin-like

Protein Analysis

553

Amino Acids

59.9

Weight (kDa)

8.57

Isoelectric Point (pI)

30.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	15 - 260	1.1e-92	Nodulin-like
MFS_1	PF07690	66 - 422	7.2e-06	Major Facilitator Superfamily
NFD4_C	PF23262	323 - 535	3.3e-33	NFD4, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003876)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16660 AT2G16660 AT4G34950
fragaria_vesca	FvH4_1g11700 FvH4_2g01480
malus_domestica	MD02G1130000.v1.1 MD05G1119300.v1.1 MD10G1122400.v1.1
prunus_persica	Prupe.7G169700_v2.0.a1 Prupe.8G163500_v2.0.a1
pyrus_communis	pycom02g10190 pycom05g11320 pycom05g11330 pycom10g10530
rosa_chinensis	RchiOBHm_Chr2g0099271 RchiOBHm_Chr6g0244111
rosa_laevigata	RLG00000015380 RLG00000016867
rosa_multiflora	Rmu_sc0001455.1_g000032 Rmu_sc0029692.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143260 Rroxscaffold_7G00216060
rosa_rugosa	Rorug02G0078300 Rorug05G0507500
rosa_samantha	Rh2AG127600 Rh2BG130600 Rh2CG131800 Rh2DG132300 Rh6AG022000 Rh6BG017700 Rh6CG014400 Rh6DG015600
rosa_wichuraiana	Rw2G009850 Rw6G001810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1505
AatII	GACGTC	1 cut(s)	186
Acc36I	ACCTGC	1 cut(s)	1505
AccB1I	GGYRCC	1 cut(s)	284
AccB7I	CCANNNNNTGG	2 cut(s)	45, 1134
AccBSI	CCGCTC	1 cut(s)	500
AccII	CGCG	2 cut(s)	800, 802
AccIII	TCCGGA	2 cut(s)	417, 832
AclI	AACGTT	1 cut(s)	1392
AclWI	GGATC	3 cut(s)	824, 837, 1393
AcoI	YGGCCR	3 cut(s)	387, 519, 1479
AcsI	RAATTY	1 cut(s)	312
AcvI	CACGTG	1 cut(s)	375
AcyI	GRCGYC	2 cut(s)	183, 285
AdeI	CACNNNGTG	1 cut(s)	375
AfaI	GTAC	1 cut(s)	329
AflIII	ACRYGT	1 cut(s)	401
AgeI	ACCGGT	2 cut(s)	433, 955
AgsI	TTSAA	5 cut(s)	317, 652, 796, 1296, 1616
AjiI	CACGTC	3 cut(s)	402, 730, 928
AjnI	CCWGG	2 cut(s)	236, 1273
AluBI	AGCT	5 cut(s)	151, 157, 194, 1223, 1619
AluI	AGCT	5 cut(s)	151, 157, 194, 1223, 1619
Alw21I	GWGCWC	3 cut(s)	159, 473, 975
Alw26I	GTCTC	4 cut(s)	442, 946, 1198, 1370
AlwI	GGATC	3 cut(s)	824, 837, 1393
AlwNI	CAGNNNCTG	1 cut(s)	1352
Ama87I	CYCGRG	1 cut(s)	152
Aor13HI	TCCGGA	2 cut(s)	417, 832
ApaI	GGGCCC	1 cut(s)	1510
ApeKI	GCWGC	3 cut(s)	871, 1220, 1346
ApoI	RAATTY	1 cut(s)	312
AsiGI	ACCGGT	2 cut(s)	433, 955
Asp700I	GAANNNNTTC	1 cut(s)	1156
AspLEI	GCGC	4 cut(s)	287, 497, 802, 1090
AspS9I	GGNCC	9 cut(s)	73, 241, 431, 804, 1072, 1419, 1506, 1507, 1540
AsuC2I	CCSGG	2 cut(s)	815, 1447
AsuHPI	GGTGA	6 cut(s)	52, 136, 475, 559, 970, 1117
AvaI	CYCGRG	1 cut(s)	152
AvaII	GGWCC	4 cut(s)	73, 241, 431, 1419
BaeGI	GKGCMC	1 cut(s)	1510
BamHI	GGATCC	1 cut(s)	829
BanI	GGYRCC	1 cut(s)	284
BanII	GRGCYC	2 cut(s)	159, 1510
BbrPI	CACGTG	1 cut(s)	375
BbsI	GAAGAC	2 cut(s)	571, 724
Bbv12I	GWGCWC	3 cut(s)	159, 473, 975
BbvI	GCAGC	3 cut(s)	858, 1232, 1358
BccI	CCATC	2 cut(s)	47, 1592
BceAI	ACGGC	7 cut(s)	298, 374, 402, 527, 670, 751, 1494
BciT130I	CCWGG	2 cut(s)	238, 1275
BciVI	GTATCC	3 cut(s)	1005, 1088, 1241
BcnI	CCSGG	2 cut(s)	815, 1447
BcoDI	GTCTC	4 cut(s)	442, 946, 1198, 1370
BfoI	RGCGCY	2 cut(s)	288, 1091
BfuAI	ACCTGC	1 cut(s)	1505
BfuI	GTATCC	3 cut(s)	1005, 1088, 1241
BisI	GCNGC	9 cut(s)	498, 612, 869, 872, 879, 1194, 1221, 1347, 1598
BlsI	GCNGC	9 cut(s)	499, 613, 870, 873, 880, 1195, 1222, 1348, 1599
Bme1390I	CCNGG	4 cut(s)	238, 815, 1275, 1447
Bme18I	GGWCC	4 cut(s)	73, 241, 431, 1419
BmeT110I	CYCGRG	1 cut(s)	152
BmgBI	CACGTC	3 cut(s)	402, 730, 928
BmgT120I	GGNCC	9 cut(s)	73, 241, 431, 804, 1072, 1419, 1506, 1507, 1540
BmrFI	CCNGG	4 cut(s)	238, 815, 1275, 1447
BmrI	ACTGGG	1 cut(s)	283
BmsI	GCATC	2 cut(s)	109, 1358
BmuI	ACTGGG	1 cut(s)	283
BpiI	GAAGAC	2 cut(s)	571, 724
BpuMI	CCSGG	2 cut(s)	815, 1447
BsaAI	YACGTR	2 cut(s)	375, 460
BsaHI	GRCGYC	2 cut(s)	183, 285
BsaI	GGTCTC	4 cut(s)	442, 946, 1198, 1370
BsaJI	CCNNGG	4 cut(s)	237, 427, 573, 615
BsaWI	WCCGGW	5 cut(s)	417, 433, 832, 847, 955
BsaXI	ACNNNNNCTCC	6 cut(s)	89, 119, 152, 182, 719, 749
Bse118I	RCCGGY	4 cut(s)	209, 433, 841, 955
Bse1I	ACTGG	6 cut(s)	76, 289, 335, 522, 1051, 1128
Bse3DI	GCAATG	1 cut(s)	1263
BseAI	TCCGGA	2 cut(s)	417, 832
BseBI	CCWGG	2 cut(s)	238, 1275
BseDI	CCNNGG	4 cut(s)	237, 427, 573, 615
BseGI	GGATG	2 cut(s)	384, 928
BseMI	GCAATG	1 cut(s)	1263
BseMII	CTCAG	3 cut(s)	458, 1241, 1446
BseNI	ACTGG	6 cut(s)	76, 289, 335, 522, 1051, 1128
BseRI	GAGGAG	8 cut(s)	194, 743, 746, 958, 961, 964, 983, 1247
BseSI	GKGCMC	1 cut(s)	1510
BseX3I	CGGCCG	2 cut(s)	387, 1479
BseXI	GCAGC	3 cut(s)	858, 1232, 1358
BseYI	CCCAGC	2 cut(s)	147, 1342
Bsh1236I	CGCG	2 cut(s)	800, 802
Bsh1285I	CGRYCG	3 cut(s)	226, 390, 1482
BshNI	GGYRCC	1 cut(s)	284
BshTI	ACCGGT	2 cut(s)	433, 955
BsiEI	CGRYCG	3 cut(s)	226, 390, 1482
BsiHKAI	GWGCWC	3 cut(s)	159, 473, 975
BsiHKCI	CYCGRG	1 cut(s)	152
BslFI	GGGAC	2 cut(s)	1057, 1325
BsmAI	GTCTC	4 cut(s)	442, 946, 1198, 1370
BsmFI	GGGAC	2 cut(s)	1057, 1325
BsmI	GAATGC	2 cut(s)	444, 1222
Bso31I	GGTCTC	4 cut(s)	442, 946, 1198, 1370
BsoBI	CYCGRG	1 cut(s)	152
Bsp120I	GGGCCC	1 cut(s)	1506
Bsp1286I	GDGCHC	4 cut(s)	159, 473, 975, 1510
Bsp13I	TCCGGA	2 cut(s)	417, 832
Bsp143I	GATC	4 cut(s)	273, 829, 1110, 1398
Bsp19I	CCATGG	1 cut(s)	573
BspCNI	CTCAG	3 cut(s)	459, 1240, 1445
BspEI	TCCGGA	2 cut(s)	417, 832
BspFNI	CGCG	2 cut(s)	800, 802
BspHI	TCATGA	1 cut(s)	135
BspMI	ACCTGC	1 cut(s)	1505
BspPI	GGATC	3 cut(s)	824, 837, 1393
BspQI	GCTCTTC	2 cut(s)	725, 1433
BspT107I	GGYRCC	1 cut(s)	284
BspTNI	GGTCTC	4 cut(s)	442, 946, 1198, 1370
BsrBI	CCGCTC	1 cut(s)	500
BsrDI	GCAATG	1 cut(s)	1263
BsrFI	RCCGGY	4 cut(s)	209, 433, 841, 955
BsrI	ACTGG	6 cut(s)	76, 289, 335, 522, 1051, 1128
BssAI	RCCGGY	4 cut(s)	209, 433, 841, 955
BssECI	CCNNGG	4 cut(s)	237, 427, 573, 615
BssMI	GATC	4 cut(s)	273, 829, 1110, 1398
BssNI	GRCGYC	2 cut(s)	183, 285
BssT1I	CCWWGG	1 cut(s)	573
Bst2UI	CCWGG	2 cut(s)	238, 1275
Bst4CI	ACNGT	2 cut(s)	227, 1339
Bst6I	CTCTTC	2 cut(s)	725, 1433
BstACI	GRCGYC	2 cut(s)	183, 285
BstAPI	GCANNNNNTGC	1 cut(s)	1497
BstBAI	YACGTR	2 cut(s)	375, 460
BstC8I	GCNNGC	6 cut(s)	211, 540, 804, 876, 1086, 1621
BstDEI	CTNAG	4 cut(s)	467, 1227, 1432, 1593
BstDSI	CCRYGG	1 cut(s)	573
BstF5I	GGATG	2 cut(s)	384, 928
BstFNI	CGCG	2 cut(s)	800, 802
BstH2I	RGCGCY	2 cut(s)	288, 1091
BstHHI	GCGC	4 cut(s)	287, 497, 802, 1090
BstKTI	GATC	4 cut(s)	276, 832, 1113, 1401
BstMAI	GTCTC	4 cut(s)	442, 946, 1198, 1370
BstMBI	GATC	4 cut(s)	273, 829, 1110, 1398
BstMCI	CGRYCG	3 cut(s)	226, 390, 1482
BstMWI	GCNNNNNNNGC	3 cut(s)	215, 360, 1497
BstNI	CCWGG	2 cut(s)	238, 1275
BstSCI	CCNGG	4 cut(s)	236, 813, 1273, 1445
BstSLI	GKGCMC	1 cut(s)	1510
BstUI	CGCG	2 cut(s)	800, 802
BstV1I	GCAGC	3 cut(s)	858, 1232, 1358
BstV2I	GAAGAC	2 cut(s)	571, 724
BstX2I	RGATCY	1 cut(s)	829
BstYI	RGATCY	1 cut(s)	829
BstZI	CGGCCG	2 cut(s)	387, 1479
BsuI	GTATCC	3 cut(s)	1005, 1088, 1241
BtgI	CCRYGG	1 cut(s)	573
BtgZI	GCGATG	1 cut(s)	1004
BtrI	CACGTC	3 cut(s)	402, 730, 928
BtsCI	GGATG	2 cut(s)	384, 928
BtsIMutI	CAGTG	1 cut(s)	296
BveI	ACCTGC	1 cut(s)	1505
Cac8I	GCNNGC	6 cut(s)	211, 540, 804, 876, 1086, 1621
CaiI	CAGNNNCTG	1 cut(s)	1352
CciI	TCATGA	1 cut(s)	135
CfoI	GCGC	4 cut(s)	287, 497, 802, 1090
Cfr10I	RCCGGY	4 cut(s)	209, 433, 841, 955
Cfr13I	GGNCC	9 cut(s)	73, 241, 431, 804, 1072, 1419, 1506, 1507, 1540
Csp6I	GTAC	1 cut(s)	328
CspAI	ACCGGT	2 cut(s)	433, 955
CviAII	CATG	7 cut(s)	136, 355, 535, 574, 587, 1270, 1537
CviQI	GTAC	1 cut(s)	328
DdeI	CTNAG	4 cut(s)	467, 1227, 1432, 1593
DinI	GGCGCC	1 cut(s)	286
DpnI	GATC	4 cut(s)	275, 831, 1112, 1400
DpnII	GATC	4 cut(s)	273, 829, 1110, 1398
DraIII	CACNNNGTG	1 cut(s)	375
EaeI	YGGCCR	3 cut(s)	387, 519, 1479
EagI	CGGCCG	2 cut(s)	387, 1479
Eam1104I	CTCTTC	2 cut(s)	725, 1433
EarI	CTCTTC	2 cut(s)	725, 1433
EciI	GGCGGA	2 cut(s)	598, 727
Ecl136II	GAGCTC	1 cut(s)	157
EclXI	CGGCCG	2 cut(s)	387, 1479
Eco130I	CCWWGG	1 cut(s)	573
Eco147I	AGGCCT	1 cut(s)	1437
Eco24I	GRGCYC	2 cut(s)	159, 1510
Eco31I	GGTCTC	4 cut(s)	442, 946, 1198, 1370
Eco47I	GGWCC	4 cut(s)	73, 241, 431, 1419
Eco52I	CGGCCG	2 cut(s)	387, 1479
Eco53kI	GAGCTC	1 cut(s)	157
Eco72I	CACGTG	1 cut(s)	375
Eco88I	CYCGRG	1 cut(s)	152
EcoICRI	GAGCTC	1 cut(s)	157
EcoO109I	RGGNCCY	3 cut(s)	241, 1419, 1506
EcoRII	CCWGG	2 cut(s)	236, 1273
EcoT14I	CCWWGG	1 cut(s)	573
EcoT38I	GRGCYC	2 cut(s)	159, 1510
EgeI	GGCGCC	1 cut(s)	286
EheI	GGCGCC	1 cut(s)	286
ErhI	CCWWGG	1 cut(s)	573
FaeI	CATG	7 cut(s)	139, 358, 538, 577, 590, 1273, 1540
FaqI	GGGAC	2 cut(s)	1057, 1325
FatI	CATG	7 cut(s)	135, 354, 534, 573, 586, 1269, 1536
FauI	CCCGC	1 cut(s)	795
Fnu4HI	GCNGC	9 cut(s)	498, 612, 869, 872, 879, 1194, 1221, 1347, 1598
FokI	GGATG	2 cut(s)	391, 935
FriOI	GRGCYC	2 cut(s)	159, 1510
Fsp4HI	GCNGC	9 cut(s)	498, 612, 869, 872, 879, 1194, 1221, 1347, 1598
GlaI	GCGC	4 cut(s)	286, 496, 801, 1089
GluI	GCNGC	9 cut(s)	498, 612, 869, 872, 879, 1194, 1221, 1347, 1598
GsaI	CCCAGC	2 cut(s)	151, 1346
HaeII	RGCGCY	2 cut(s)	288, 1091
HhaI	GCGC	4 cut(s)	287, 497, 802, 1090
Hin1I	GRCGYC	2 cut(s)	183, 285
Hin1II	CATG	7 cut(s)	139, 358, 538, 577, 590, 1273, 1540
Hin6I	GCGC	4 cut(s)	285, 495, 800, 1088
HinP1I	GCGC	4 cut(s)	285, 495, 800, 1088
HindIII	AAGCTT	1 cut(s)	192
HinfI	GANTC	5 cut(s)	629, 1152, 1231, 1308, 1612
HphI	GGTGA	6 cut(s)	52, 136, 475, 559, 970, 1117
Hpy188III	TCNNGA	8 cut(s)	136, 418, 633, 704, 833, 860, 1009, 1186
HpyAV	CCTTC	3 cut(s)	33, 562, 673
HpyCH4III	ACNGT	2 cut(s)	227, 1339
HpyCH4IV	ACGT	9 cut(s)	183, 374, 401, 459, 729, 927, 998, 1104, 1392
HpyCH4V	TGCA	3 cut(s)	354, 1220, 1500
HpyF10VI	GCNNNNNNNGC	3 cut(s)	215, 360, 1497
HpyF3I	CTNAG	4 cut(s)	467, 1227, 1432, 1593
HpySE526I	ACGT	9 cut(s)	183, 374, 401, 459, 729, 927, 998, 1104, 1392
Hsp92I	GRCGYC	2 cut(s)	183, 285
Hsp92II	CATG	7 cut(s)	139, 358, 538, 577, 590, 1273, 1540
HspAI	GCGC	4 cut(s)	285, 495, 800, 1088
KasI	GGCGCC	1 cut(s)	284
Kpn2I	TCCGGA	2 cut(s)	417, 832
KroI	GCCGGC	1 cut(s)	209
KroNI	GCCGGC	1 cut(s)	211
Kzo9I	GATC	4 cut(s)	273, 829, 1110, 1398
LguI	GCTCTTC	2 cut(s)	725, 1433
LmnI	GCTCC	5 cut(s)	16, 263, 420, 970, 1283
Lsp1109I	GCAGC	3 cut(s)	858, 1232, 1358
LweI	GCATC	2 cut(s)	109, 1358
MaeII	ACGT	9 cut(s)	183, 374, 401, 459, 729, 927, 998, 1104, 1392
MaeIII	GTNAC	5 cut(s)	58, 278, 397, 544, 1514
MalI	GATC	4 cut(s)	275, 831, 1112, 1400
MbiI	CCGCTC	1 cut(s)	500
MboI	GATC	4 cut(s)	273, 829, 1110, 1398
MboII	GAAGA	8 cut(s)	571, 640, 658, 712, 724, 1105, 1420, 1621
MfeI	CAATTG	1 cut(s)	1296
MflI	RGATCY	1 cut(s)	829
MhlI	GDGCHC	4 cut(s)	159, 473, 975, 1510
MluCI	AATT	4 cut(s)	312, 978, 1066, 1296
Mly113I	GGCGCC	1 cut(s)	285
MlyI	GAGTC	1 cut(s)	638
MmeI	TCCRAC	6 cut(s)	132, 246, 807, 981, 1225, 1285
MroI	TCCGGA	2 cut(s)	417, 832
MroNI	GCCGGC	1 cut(s)	209
MroXI	GAANNNNTTC	1 cut(s)	1156
MseI	TTAA	1 cut(s)	507
MslI	CAYNNNNRTG	3 cut(s)	377, 572, 1268
MspA1I	CMGCKG	1 cut(s)	871
MspR9I	CCNGG	4 cut(s)	238, 815, 1275, 1447
MunI	CAATTG	1 cut(s)	1296
Mva1269I	GAATGC	2 cut(s)	444, 1222
MvaI	CCWGG	2 cut(s)	238, 1275
MvnI	CGCG	2 cut(s)	800, 802
MwoI	GCNNNNNNNGC	3 cut(s)	215, 360, 1497
NaeI	GCCGGC	1 cut(s)	211
NarI	GGCGCC	1 cut(s)	285
NciI	CCSGG	2 cut(s)	815, 1447
NcoI	CCATGG	1 cut(s)	573
NdeII	GATC	4 cut(s)	273, 829, 1110, 1398
NgoMIV	GCCGGC	1 cut(s)	209
NlaIII	CATG	7 cut(s)	139, 358, 538, 577, 590, 1273, 1540
NmeAIII	GCCGAG	2 cut(s)	497, 640
NmuCI	GTSAC	3 cut(s)	58, 397, 544
PaeR7I	CTCGAG	1 cut(s)	152
PagI	TCATGA	1 cut(s)	135
PaqCI	CACCTGC	1 cut(s)	1505
PceI	AGGCCT	1 cut(s)	1437
PciSI	GCTCTTC	2 cut(s)	725, 1433
PcsI	WCGNNNNNNNCGW	4 cut(s)	180, 261, 666, 1152
PctI	GAATGC	2 cut(s)	444, 1222
PdiI	GCCGGC	1 cut(s)	211
PdmI	GAANNNNTTC	1 cut(s)	1156
PfeI	GAWTC	4 cut(s)	1152, 1231, 1308, 1612
PflMI	CCANNNNNTGG	2 cut(s)	45, 1134
PinAI	ACCGGT	2 cut(s)	433, 955
PkrI	GCNGC	9 cut(s)	499, 613, 870, 873, 880, 1195, 1222, 1348, 1599
PleI	GAGTC	1 cut(s)	637
PluTI	GGCGCC	1 cut(s)	288
PmaCI	CACGTG	1 cut(s)	375
PmlI	CACGTG	1 cut(s)	375
PpsI	GAGTC	1 cut(s)	637
Ppu21I	YACGTR	2 cut(s)	375, 460
PpuMI	RGGWCCY	2 cut(s)	241, 1419
Psp124BI	GAGCTC	1 cut(s)	159
Psp1406I	AACGTT	1 cut(s)	1392
Psp5II	RGGWCCY	2 cut(s)	241, 1419
Psp6I	CCWGG	2 cut(s)	236, 1273
PspCI	CACGTG	1 cut(s)	375
PspFI	CCCAGC	2 cut(s)	147, 1342
PspGI	CCWGG	2 cut(s)	236, 1273
PspOMI	GGGCCC	1 cut(s)	1506
PspPI	GGNCC	9 cut(s)	73, 241, 431, 804, 1072, 1419, 1506, 1507, 1540
PspPPI	RGGWCCY	2 cut(s)	241, 1419
PspXI	VCTCGAGB	1 cut(s)	152
PstNI	CAGNNNCTG	1 cut(s)	1352
PsuI	RGATCY	1 cut(s)	829
RsaI	GTAC	1 cut(s)	329
RsaNI	GTAC	1 cut(s)	328
RseI	CAYNNNNRTG	3 cut(s)	377, 572, 1268
SacI	GAGCTC	1 cut(s)	159
SapI	GCTCTTC	2 cut(s)	725, 1433
SaqAI	TTAA	1 cut(s)	507
SatI	GCNGC	9 cut(s)	498, 612, 869, 872, 879, 1194, 1221, 1347, 1598
Sau3AI	GATC	4 cut(s)	273, 829, 1110, 1398
Sau96I	GGNCC	9 cut(s)	73, 241, 431, 804, 1072, 1419, 1506, 1507, 1540
SchI	GAGTC	1 cut(s)	638
ScrFI	CCNGG	4 cut(s)	238, 815, 1275, 1447
SduI	GDGCHC	4 cut(s)	159, 473, 975, 1510
SfaNI	GCATC	2 cut(s)	109, 1358
SfoI	GGCGCC	1 cut(s)	286
Sfr274I	CTCGAG	1 cut(s)	152
SinI	GGWCC	4 cut(s)	73, 241, 431, 1419
SlaI	CTCGAG	1 cut(s)	152
SmiMI	CAYNNNNRTG	3 cut(s)	377, 572, 1268
SmlI	CTYRAG	1 cut(s)	152
SmoI	CTYRAG	1 cut(s)	152
Sse9I	AATT	4 cut(s)	312, 978, 1066, 1296
SseBI	AGGCCT	1 cut(s)	1437
SspDI	GGCGCC	1 cut(s)	284
SstI	GAGCTC	1 cut(s)	159
StuI	AGGCCT	1 cut(s)	1437
StyD4I	CCNGG	4 cut(s)	236, 813, 1273, 1445
StyI	CCWWGG	1 cut(s)	573
TaaI	ACNGT	2 cut(s)	227, 1339
TaiI	ACGT	9 cut(s)	186, 377, 404, 462, 732, 930, 1001, 1107, 1395
TaqI	TCGA	5 cut(s)	153, 264, 809, 984, 1109
TasI	AATT	4 cut(s)	312, 978, 1066, 1296
TauI	GCSGC	6 cut(s)	500, 614, 871, 881, 1196, 1600
TfiI	GAWTC	4 cut(s)	1152, 1231, 1308, 1612
Tru1I	TTAA	1 cut(s)	507
Tru9I	TTAA	1 cut(s)	507
TscAI	CASTG	1 cut(s)	296
TseFI	GTSAC	3 cut(s)	58, 397, 544
TseI	GCWGC	3 cut(s)	871, 1220, 1346
Tsp45I	GTSAC	3 cut(s)	58, 397, 544
TspDTI	ATGAA	8 cut(s)	21, 152, 395, 523, 603, 688, 1076, 1171
TspGWI	ACGGA	4 cut(s)	160, 250, 588, 891
TspRI	CASTG	1 cut(s)	296
Van91I	CCANNNNNTGG	2 cut(s)	45, 1134
VpaK11BI	GGWCC	4 cut(s)	73, 241, 431, 1419
XapI	RAATTY	1 cut(s)	312
XhoI	CTCGAG	1 cut(s)	152
XmnI	GAANNNNTTC	1 cut(s)	1156
ZraI	GACGTC	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.