Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0003876

Physical Location & Seq

Genomic Coordinates Reverse (-)

19944337 .. 19950079

Gene Structure 5743 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1122400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGGGTTCGCTTCCGACCGCTCGTCCGTTTCCTCCGCCACCAAATGGATGGGATTCGTCACCGCCGTCTGGGTTCAAGCTATTTCCGGCAACAATTACACCTTCTCCAACTACTCCGATGCACTCAAAACCCTCATGAGCCTCACCCAGCTCGAACTCAACAACCTCTCCGTCGCCAAAGACGTCGGCAAAGCCTTCGGCCTCCTCGCCGGCCTCGCCTCTGACAAACTACCCACTTGGGTTATCCTCCTCATCGGCTCCGTCGAGGGCCTGGTCGGCTACGGCGCCCAGTGGCTCGTCGTCAGTGAAAGGATCAAACCCCTCTCCTACTGGCAGATGTGTATATTTCTCTGCATGGGCGGCAACAGCACGACGTGGATGAACACGGCGATACTTGTCACCTGCATCCGAAACTTCCGGCGAAACAGGGGACCCGTTTCGGGGATTCTGAAGGGCTACGTGGGTCTCAGCACCGCCATCTTCACCGACCTCTGCGCCGCTCTGTTCAACAACGACCCCGCTAGCTTCCTCCTCATGCTGTCCATAACCCCCTTCGCCGTCTGCTTAACCGCCATGCTCTTCCTCCGCGAGGTCACCCCTTCTTCCTCCTCCGCCGAAGACCACCGCGACTCCAGATATTTCTGGATCGTCAACGCCGGCGCAGTCTGCGTCGCCGTCTACCTCCTCGCCTACGACTTCATCCCAGACCCTTCGAACCTCTTCTCTCTAGTATTCTCCGTCATTCTCCTTATCCTCCTGGCGTCGCCGCTCGTGATTCCGGCGTACGCGTTTTTCACAGCGTGGGCCTCAAAGCCGGATCGGGTCGCGTCTGAGTCGGGTCTGGATCCGTATACCCGTGCAGACGAGCCGCTTCTGAGGCAGACGGCGGCGGACGATTCGCATCAGAAGCCGGAGGCGGATGCGGCGTCGGAGGAGATGGAGGCAAAGAGGAGGCCGGTTCTCGGGGAAGACCACACGATTTTCGAGGCAATGAGGGCGTTGGATTTCTGGATTTTGTTCGTGTCGTTTTTGTGCGGGGTGGGGACGGGTTTGGCGGTCATGAACAATATGGGGCAGATTGGATTGGCGATGGGATACGTCGACGTTTCGATCTTCGTTTCGCTCACGAGCATTTGGGGGTTTTTCGGGCGGATCGGTTCGGGTATGGTTTCGGAGAACTTCATCAGGAAAGCTGCAACACCAAGACCTCTGTGGAATGCTGCTTCTCAGATTCTAATGGCTGTTGGCTACATCCTAATGGCCATCGCCATGCCTGGTTCGCTATACATCGGTTCGATCGTCGTTGGCATATGCTACGGAATTCGTCTTGCCATCACAGTACCCACTGCATCTGAATTATTTGGTCTCAAATACTACGGACTTATTTACAACATTCTAATCCTCAACCTTCCACTCGGCTCCTTCCTCTTCTCCGGCCTGCTTGCCGGACTATTATACGACATGGAGGCTACCACCACGGAAGGAGGTGGCAACACCTGCGTTGGCGCACATTGCTACCGGCTCGTGTTTGTTATCATGGCCATTGCCTGTGTTATCGGGTTTGGTTTGGACGTTTTGCTGTCCATTAGAACCAAGAATCTCTACACCAAGATTCAAGCTGGCAAGAAAACAAAGAGAGTGGTTAATGGCACACAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nodulin-like

Protein Analysis

553

Amino Acids

59.9

Weight (kDa)

7.46

Isoelectric Point (pI)

26.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	15 - 260	4.3e-93	Nodulin-like
NFD4_C	PF23262	330 - 535	2.8e-31	NFD4, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003876)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16660 AT2G16660 AT4G34950
fragaria_vesca	FvH4_1g11700 FvH4_2g01480
malus_domestica	MD02G1130000.v1.1 MD05G1119300.v1.1 MD10G1122400.v1.1
prunus_persica	Prupe.7G169700_v2.0.a1 Prupe.8G163500_v2.0.a1
pyrus_communis	pycom02g10190 pycom05g11320 pycom05g11330 pycom10g10530
rosa_chinensis	RchiOBHm_Chr2g0099271 RchiOBHm_Chr6g0244111
rosa_laevigata	RLG00000015380 RLG00000016867
rosa_multiflora	Rmu_sc0001455.1_g000032 Rmu_sc0029692.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143260 Rroxscaffold_7G00216060
rosa_rugosa	Rorug02G0078300 Rorug05G0507500
rosa_samantha	Rh2AG127600 Rh2BG130600 Rh2CG131800 Rh2DG132300 Rh6AG022000 Rh6BG017700 Rh6CG014400 Rh6DG015600
rosa_wichuraiana	Rw2G009850 Rw6G001810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	410, 1505
AatII	GACGTC	1 cut(s)	186
Acc36I	ACCTGC	2 cut(s)	410, 1505
AccB1I	GGYRCC	1 cut(s)	284
AccB7I	CCANNNNNTGG	1 cut(s)	45
AccBSI	CCGCTC	3 cut(s)	21, 500, 769
AccI	GTMKAC	3 cut(s)	678, 851, 1101
AccII	CGCG	4 cut(s)	588, 627, 788, 827
AclWI	GGATC	6 cut(s)	320, 653, 825, 839, 852, 1160
AcoI	YGGCCR	2 cut(s)	1260, 1539
AcsI	RAATTY	1 cut(s)	1320
AcuI	CTGAAG	1 cut(s)	470
AcyI	GRCGYC	4 cut(s)	183, 285, 761, 926
AdeI	CACNNNGTG	2 cut(s)	375, 801
AfaI	GTAC	2 cut(s)	785, 1341
AfiI	CCNNNNNNNGG	6 cut(s)	45, 69, 440, 441, 589, 962
AflIII	ACRYGT	1 cut(s)	786
AgsI	TTSAA	3 cut(s)	77, 508, 1616
AhdI	GACNNNNNGTC	1 cut(s)	22
AjiI	CACGTC	1 cut(s)	375
AjnI	CCWGG	3 cut(s)	270, 756, 1273
AluBI	AGCT	5 cut(s)	80, 151, 525, 1193, 1619
AluI	AGCT	5 cut(s)	80, 151, 525, 1193, 1619
Alw26I	GTCTC	2 cut(s)	470, 1370
AlwI	GGATC	6 cut(s)	320, 653, 825, 839, 852, 1160
Ama87I	CYCGRG	1 cut(s)	962
AoxI	GGCC	8 cut(s)	199, 211, 268, 804, 953, 1260, 1435, 1539
ApeKI	GCWGC	2 cut(s)	1193, 1220
ApoI	RAATTY	1 cut(s)	1320
Asp700I	GAANNNNTTC	1 cut(s)	719
AspLEI	GCGC	4 cut(s)	287, 497, 662, 1508
AspS9I	GGNCC	3 cut(s)	268, 431, 804
AsuHPI	GGTGA	5 cut(s)	52, 136, 391, 475, 586
AsuII	TTCGAA	1 cut(s)	713
AsuNHI	GCTAGC	1 cut(s)	521
AvaI	CYCGRG	1 cut(s)	962
AvaII	GGWCC	1 cut(s)	431
BalI	TGGCCA	2 cut(s)	1262, 1541
BamHI	GGATCC	1 cut(s)	844
BanI	GGYRCC	1 cut(s)	284
BauI	CACGAG	3 cut(s)	770, 1126, 1523
BbsI	GAAGAC	2 cut(s)	624, 975
BbvI	GCAGC	2 cut(s)	1180, 1207
BccI	CCATC	6 cut(s)	43, 485, 931, 1084, 1271, 1340
BceAI	ACGGC	6 cut(s)	50, 298, 402, 542, 659, 900
BcgI	CGANNNNNNTGC	2 cut(s)	178, 212
BciT130I	CCWGG	3 cut(s)	272, 758, 1275
BciVI	GTATCC	1 cut(s)	1088
BcoDI	GTCTC	2 cut(s)	470, 1370
BfaI	CTAG	2 cut(s)	522, 728
BfoI	RGCGCY	1 cut(s)	288
BfuAI	ACCTGC	2 cut(s)	410, 1505
BfuI	GTATCC	1 cut(s)	1088
BglI	GCCNNNNNGGC	1 cut(s)	276
BisI	GCNGC	8 cut(s)	361, 498, 767, 869, 888, 924, 1194, 1221
BlsI	GCNGC	8 cut(s)	362, 499, 768, 870, 889, 925, 1195, 1222
Bme1390I	CCNGG	3 cut(s)	272, 758, 1275
Bme18I	GGWCC	1 cut(s)	431
BmeRI	GACNNNNNGTC	1 cut(s)	22
BmeT110I	CYCGRG	1 cut(s)	962
BmgBI	CACGTC	1 cut(s)	375
BmgT120I	GGNCC	3 cut(s)	268, 431, 804
BmiI	GGNNCC	6 cut(s)	259, 286, 432, 433, 846, 1420
BmrFI	CCNGG	3 cut(s)	272, 758, 1275
BmrI	ACTGGG	1 cut(s)	283
BmsI	GCATC	5 cut(s)	109, 414, 910, 910, 1358
BmtI	GCTAGC	1 cut(s)	525
BmuI	ACTGGG	1 cut(s)	283
BpiI	GAAGAC	2 cut(s)	624, 975
BpmI	CTGGAG	1 cut(s)	616
Bpu14I	TTCGAA	1 cut(s)	713
BsaAI	YACGTR	1 cut(s)	460
BsaBI	GATNNNNATC	1 cut(s)	900
BsaHI	GRCGYC	4 cut(s)	183, 285, 761, 926
BsaI	GGTCTC	2 cut(s)	470, 1370
BsaJI	CCNNGG	1 cut(s)	1476
BsaXI	ACNNNNNCTCC	6 cut(s)	89, 119, 152, 182, 614, 644
Bsc4I	CCNNNNNNNGG	6 cut(s)	45, 69, 440, 441, 589, 962
Bse118I	RCCGGY	4 cut(s)	209, 656, 955, 1518
Bse1I	ACTGG	2 cut(s)	289, 335
Bse3DI	GCAATG	3 cut(s)	996, 1510, 1542
Bse8I	GATNNNNATC	1 cut(s)	900
BseBI	CCWGG	3 cut(s)	272, 758, 1275
BseDI	CCNNGG	1 cut(s)	1476
BseGI	GGATG	6 cut(s)	54, 384, 405, 699, 925, 1251
BseJI	GATNNNNATC	1 cut(s)	900
BseLI	CCNNNNNNNGG	6 cut(s)	45, 69, 440, 441, 589, 962
BseMI	GCAATG	3 cut(s)	996, 1510, 1542
BseMII	CTCAG	4 cut(s)	481, 822, 866, 1241
BseNI	ACTGG	2 cut(s)	289, 335
BseRI	GAGGAG	7 cut(s)	194, 239, 521, 598, 674, 947, 964
BseXI	GCAGC	2 cut(s)	1180, 1207
BseYI	CCCAGC	1 cut(s)	147
BsgI	GTGCAG	1 cut(s)	879
Bsh1236I	CGCG	4 cut(s)	588, 627, 788, 827
Bsh1285I	CGRYCG	2 cut(s)	19, 1299
BshFI	GGCC	8 cut(s)	201, 213, 270, 806, 955, 1262, 1437, 1541
BshNI	GGYRCC	1 cut(s)	284
BsiEI	CGRYCG	2 cut(s)	19, 1299
BsiHKCI	CYCGRG	1 cut(s)	962
BsiWI	CGTACG	1 cut(s)	783
BslFI	GGGAC	2 cut(s)	444, 1057
BslI	CCNNNNNNNGG	6 cut(s)	45, 69, 440, 441, 589, 962
BsmAI	GTCTC	2 cut(s)	470, 1370
BsmFI	GGGAC	2 cut(s)	444, 1057
BsmI	GAATGC	1 cut(s)	1222
BsnI	GGCC	8 cut(s)	201, 213, 270, 806, 955, 1262, 1437, 1541
Bso31I	GGTCTC	2 cut(s)	470, 1370
BsoBI	CYCGRG	1 cut(s)	962
Bsp119I	TTCGAA	1 cut(s)	713
Bsp143I	GATC	7 cut(s)	312, 645, 817, 844, 1110, 1152, 1296
BspANI	GGCC	8 cut(s)	201, 213, 270, 806, 955, 1262, 1437, 1541
BspCNI	CTCAG	4 cut(s)	480, 823, 867, 1240
BspFNI	CGCG	4 cut(s)	588, 627, 788, 827
BspHI	TCATGA	2 cut(s)	135, 1059
BspLI	GGNNCC	6 cut(s)	259, 286, 432, 433, 846, 1420
BspMI	ACCTGC	2 cut(s)	410, 1505
BspOI	GCTAGC	1 cut(s)	525
BspPI	GGATC	6 cut(s)	320, 653, 825, 839, 852, 1160
BspQI	GCTCTTC	1 cut(s)	584
BspT104I	TTCGAA	1 cut(s)	713
BspT107I	GGYRCC	1 cut(s)	284
BspTNI	GGTCTC	2 cut(s)	470, 1370
BsrBI	CCGCTC	3 cut(s)	21, 500, 769
BsrDI	GCAATG	3 cut(s)	996, 1510, 1542
BsrFI	RCCGGY	4 cut(s)	209, 656, 955, 1518
BsrI	ACTGG	2 cut(s)	289, 335
BssAI	RCCGGY	4 cut(s)	209, 656, 955, 1518
BssECI	CCNNGG	1 cut(s)	1476
BssMI	GATC	7 cut(s)	312, 645, 817, 844, 1110, 1152, 1296
BssNAI	GTATAC	1 cut(s)	852
BssNI	GRCGYC	4 cut(s)	183, 285, 761, 926
BssSI	CACGAG	3 cut(s)	770, 1126, 1523
Bst1107I	GTATAC	1 cut(s)	852
Bst2BI	CACGAG	3 cut(s)	770, 1126, 1523
Bst2UI	CCWGG	3 cut(s)	272, 758, 1275
Bst4CI	ACNGT	1 cut(s)	1339
Bst6I	CTCTTC	3 cut(s)	584, 725, 1433
BstACI	GRCGYC	4 cut(s)	183, 285, 761, 926
BstAPI	GCANNNNNTGC	1 cut(s)	1497
BstBAI	YACGTR	1 cut(s)	460
BstBI	TTCGAA	1 cut(s)	713
BstC8I	GCNNGC	6 cut(s)	211, 523, 658, 1439, 1443, 1621
BstDEI	CTNAG	4 cut(s)	467, 831, 875, 1227
BstDSI	CCRYGG	1 cut(s)	1476
BstEII	GGTNACC	1 cut(s)	592
BstENI	CCTNNNNNAGG	1 cut(s)	587
BstF5I	GGATG	6 cut(s)	54, 384, 405, 699, 925, 1251
BstFNI	CGCG	4 cut(s)	588, 627, 788, 827
BstH2I	RGCGCY	1 cut(s)	288
BstHHI	GCGC	4 cut(s)	287, 497, 662, 1508
BstKTI	GATC	7 cut(s)	315, 648, 820, 847, 1113, 1155, 1299
BstMAI	GTCTC	2 cut(s)	470, 1370
BstMBI	GATC	7 cut(s)	312, 645, 817, 844, 1110, 1152, 1296
BstMCI	CGRYCG	2 cut(s)	19, 1299
BstNI	CCWGG	3 cut(s)	272, 758, 1275
BstPI	GGTNACC	1 cut(s)	592
BstSCI	CCNGG	3 cut(s)	270, 756, 1273
BstUI	CGCG	4 cut(s)	588, 627, 788, 827
BstV1I	GCAGC	2 cut(s)	1180, 1207
BstV2I	GAAGAC	2 cut(s)	624, 975
BstX2I	RGATCY	1 cut(s)	844
BstXI	CCANNNNNNTGG	1 cut(s)	49
BstYI	RGATCY	1 cut(s)	844
BstZ17I	GTATAC	1 cut(s)	852
BsuI	GTATCC	1 cut(s)	1088
BsuRI	GGCC	8 cut(s)	201, 213, 270, 806, 955, 1262, 1437, 1541
BtgI	CCRYGG	1 cut(s)	1476
BtgZI	GCGATG	2 cut(s)	1103, 1249
BtrI	CACGTC	1 cut(s)	375
BtsCI	GGATG	6 cut(s)	54, 384, 405, 699, 925, 1251
BtsI	GCAGTG	1 cut(s)	1344
BtsIMutI	CAGTG	3 cut(s)	296, 310, 1344
BveI	ACCTGC	2 cut(s)	410, 1505
Cac8I	GCNNGC	6 cut(s)	211, 523, 658, 1439, 1443, 1621
CciI	TCATGA	2 cut(s)	135, 1059
CfoI	GCGC	4 cut(s)	287, 497, 662, 1508
Cfr10I	RCCGGY	4 cut(s)	209, 656, 955, 1518
Cfr13I	GGNCC	3 cut(s)	268, 431, 804
CseI	GACGC	4 cut(s)	658, 750, 816, 915
Csp6I	GTAC	2 cut(s)	784, 1340
CspCI	CAANNNNNGTGG	2 cut(s)	1620, 1655
CviAII	CATG	8 cut(s)	136, 355, 535, 574, 1060, 1270, 1462, 1537
CviQI	GTAC	2 cut(s)	784, 1340
DdeI	CTNAG	4 cut(s)	467, 831, 875, 1227
DinI	GGCGCC	1 cut(s)	286
DpnI	GATC	7 cut(s)	314, 647, 819, 846, 1112, 1154, 1298
DpnII	GATC	7 cut(s)	312, 645, 817, 844, 1110, 1152, 1296
DraIII	CACNNNGTG	2 cut(s)	375, 801
DriI	GACNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	2 cut(s)	1260, 1539
Eam1104I	CTCTTC	3 cut(s)	584, 725, 1433
Eam1105I	GACNNNNNGTC	1 cut(s)	22
EarI	CTCTTC	3 cut(s)	584, 725, 1433
EciI	GGCGGA	5 cut(s)	25, 601, 905, 932, 1165
Eco31I	GGTCTC	2 cut(s)	470, 1370
Eco47I	GGWCC	1 cut(s)	431
Eco57I	CTGAAG	1 cut(s)	470
Eco88I	CYCGRG	1 cut(s)	962
Eco91I	GGTNACC	1 cut(s)	592
EcoNI	CCTNNNNNAGG	1 cut(s)	587
EcoO109I	RGGNCCY	2 cut(s)	268, 431
EcoO65I	GGTNACC	1 cut(s)	592
EcoRI	GAATTC	1 cut(s)	1320
EcoRII	CCWGG	3 cut(s)	270, 756, 1273
EgeI	GGCGCC	1 cut(s)	286
EheI	GGCGCC	1 cut(s)	286
FaeI	CATG	8 cut(s)	139, 358, 538, 577, 1063, 1273, 1465, 1540
FaqI	GGGAC	2 cut(s)	444, 1057
FatI	CATG	8 cut(s)	135, 354, 534, 573, 1059, 1269, 1461, 1536
FauI	CCCGC	2 cut(s)	526, 1028
FauNDI	CATATG	1 cut(s)	1310
FblI	GTMKAC	3 cut(s)	678, 851, 1101
Fnu4HI	GCNGC	8 cut(s)	361, 498, 767, 869, 888, 924, 1194, 1221
FokI	GGATG	6 cut(s)	61, 391, 392, 686, 932, 1238
Fsp4HI	GCNGC	8 cut(s)	361, 498, 767, 869, 888, 924, 1194, 1221
FspBI	CTAG	2 cut(s)	522, 728
GlaI	GCGC	4 cut(s)	286, 496, 661, 1507
GluI	GCNGC	8 cut(s)	361, 498, 767, 869, 888, 924, 1194, 1221
GsaI	CCCAGC	1 cut(s)	151
GsuI	CTGGAG	1 cut(s)	616
HaeII	RGCGCY	1 cut(s)	288
HaeIII	GGCC	8 cut(s)	201, 213, 270, 806, 955, 1262, 1437, 1541
HgaI	GACGC	4 cut(s)	658, 750, 816, 915
HhaI	GCGC	4 cut(s)	287, 497, 662, 1508
Hin1I	GRCGYC	4 cut(s)	183, 285, 761, 926
Hin1II	CATG	8 cut(s)	139, 358, 538, 577, 1063, 1273, 1465, 1540
Hin6I	GCGC	4 cut(s)	285, 495, 660, 1506
HinP1I	GCGC	4 cut(s)	285, 495, 660, 1506
HincII	GTYRAC	2 cut(s)	652, 1102
HindII	GTYRAC	2 cut(s)	652, 1102
HinfI	GANTC	9 cut(s)	54, 445, 629, 775, 833, 896, 1231, 1597, 1612
HphI	GGTGA	5 cut(s)	52, 136, 391, 475, 586
Hpy166II	GTNNAC	4 cut(s)	652, 679, 852, 1102
Hpy188III	TCNNGA	9 cut(s)	136, 633, 643, 772, 842, 1009, 1060, 1126, 1186
Hpy8I	GTNNAC	4 cut(s)	652, 679, 852, 1102
HpyAV	CCTTC	9 cut(s)	112, 205, 445, 562, 609, 720, 1418, 1432, 1475
HpyCH4III	ACNGT	1 cut(s)	1339
HpyCH4IV	ACGT	6 cut(s)	183, 374, 459, 1098, 1104, 1572
HpyCH4V	TGCA	6 cut(s)	122, 354, 405, 860, 1196, 1349
HpyF3I	CTNAG	4 cut(s)	467, 831, 875, 1227
HpySE526I	ACGT	6 cut(s)	183, 374, 459, 1098, 1104, 1572
Hsp92I	GRCGYC	4 cut(s)	183, 285, 761, 926
Hsp92II	CATG	8 cut(s)	139, 358, 538, 577, 1063, 1273, 1465, 1540
HspAI	GCGC	4 cut(s)	285, 495, 660, 1506
KasI	GGCGCC	1 cut(s)	284
KflI	GGGWCCC	1 cut(s)	431
KroI	GCCGGC	2 cut(s)	209, 656
KroNI	GCCGGC	2 cut(s)	211, 658
Kzo9I	GATC	7 cut(s)	312, 645, 817, 844, 1110, 1152, 1296
LguI	GCTCTTC	1 cut(s)	584
LmnI	GCTCC	2 cut(s)	263, 1424
Lsp1109I	GCAGC	2 cut(s)	1180, 1207
LweI	GCATC	5 cut(s)	109, 414, 910, 910, 1358
MaeI	CTAG	2 cut(s)	522, 728
MaeII	ACGT	6 cut(s)	183, 374, 459, 1098, 1104, 1572
MaeIII	GTNAC	3 cut(s)	58, 397, 592
MalI	GATC	7 cut(s)	314, 647, 819, 846, 1112, 1154, 1298
MbiI	CCGCTC	3 cut(s)	21, 500, 769
MboI	GATC	7 cut(s)	312, 645, 817, 844, 1110, 1152, 1296
MboII	GAAGA	8 cut(s)	472, 571, 594, 629, 712, 980, 1105, 1420
MflI	RGATCY	1 cut(s)	844
MlsI	TGGCCA	2 cut(s)	1262, 1541
MluCI	AATT	3 cut(s)	94, 1320, 1355
MluI	ACGCGT	1 cut(s)	786
MluNI	TGGCCA	2 cut(s)	1262, 1541
Mly113I	GGCGCC	1 cut(s)	285
MlyI	GAGTC	2 cut(s)	623, 842
MmeI	TCCRAC	4 cut(s)	39, 132, 909, 981
Mox20I	TGGCCA	2 cut(s)	1262, 1541
MreI	CGCCGGCG	1 cut(s)	656
MroNI	GCCGGC	2 cut(s)	209, 656
MroXI	GAANNNNTTC	1 cut(s)	719
MscI	TGGCCA	2 cut(s)	1262, 1541
MseI	TTAA	2 cut(s)	566, 1644
MslI	CAYNNNNRTG	2 cut(s)	1256, 1268
Msp20I	TGGCCA	2 cut(s)	1262, 1541
MspR9I	CCNGG	3 cut(s)	272, 758, 1275
Mva1269I	GAATGC	1 cut(s)	1222
MvaI	CCWGG	3 cut(s)	272, 758, 1275
MvnI	CGCG	4 cut(s)	588, 627, 788, 827
NaeI	GCCGGC	2 cut(s)	211, 658
NarI	GGCGCC	1 cut(s)	285
NdeI	CATATG	1 cut(s)	1310
NdeII	GATC	7 cut(s)	312, 645, 817, 844, 1110, 1152, 1296
NgoMIV	GCCGGC	2 cut(s)	209, 656
NheI	GCTAGC	1 cut(s)	521
NlaIII	CATG	8 cut(s)	139, 358, 538, 577, 1063, 1273, 1465, 1540
NlaIV	GGNNCC	6 cut(s)	259, 286, 432, 433, 846, 1420
NmeAIII	GCCGAG	1 cut(s)	1395
NmuCI	GTSAC	3 cut(s)	58, 397, 592
NspV	TTCGAA	1 cut(s)	713
PagI	TCATGA	2 cut(s)	135, 1059
PaqCI	CACCTGC	2 cut(s)	410, 1505
PciSI	GCTCTTC	1 cut(s)	584
PcsI	WCGNNNNNNNCGW	4 cut(s)	63, 180, 261, 1296
PctI	GAATGC	1 cut(s)	1222
PdiI	GCCGGC	2 cut(s)	211, 658
PdmI	GAANNNNTTC	1 cut(s)	719
PfeI	GAWTC	7 cut(s)	54, 445, 775, 896, 1231, 1597, 1612
Pfl23II	CGTACG	1 cut(s)	783
PflMI	CCANNNNNTGG	1 cut(s)	45
PkrI	GCNGC	8 cut(s)	362, 499, 768, 870, 889, 925, 1195, 1222
Ple19I	CGATCG	1 cut(s)	1299
PleI	GAGTC	2 cut(s)	623, 841
PluTI	GGCGCC	1 cut(s)	288
PpsI	GAGTC	2 cut(s)	623, 841
Ppu21I	YACGTR	1 cut(s)	460
PpuMI	RGGWCCY	1 cut(s)	431
Psp5II	RGGWCCY	1 cut(s)	431
Psp6I	CCWGG	3 cut(s)	270, 756, 1273
PspEI	GGTNACC	1 cut(s)	592
PspFI	CCCAGC	1 cut(s)	147
PspGI	CCWGG	3 cut(s)	270, 756, 1273
PspLI	CGTACG	1 cut(s)	783
PspN4I	GGNNCC	6 cut(s)	259, 286, 432, 433, 846, 1420
PspPI	GGNCC	3 cut(s)	268, 431, 804
PspPPI	RGGWCCY	1 cut(s)	431
PsuI	RGATCY	1 cut(s)	844
PvuI	CGATCG	1 cut(s)	1299
RsaI	GTAC	2 cut(s)	785, 1341
RsaNI	GTAC	2 cut(s)	784, 1340
RseI	CAYNNNNRTG	2 cut(s)	1256, 1268
SalI	GTCGAC	1 cut(s)	1100
SapI	GCTCTTC	1 cut(s)	584
SaqAI	TTAA	2 cut(s)	566, 1644
SatI	GCNGC	8 cut(s)	361, 498, 767, 869, 888, 924, 1194, 1221
Sau3AI	GATC	7 cut(s)	312, 645, 817, 844, 1110, 1152, 1296
Sau96I	GGNCC	3 cut(s)	268, 431, 804
SchI	GAGTC	2 cut(s)	623, 842
ScrFI	CCNGG	3 cut(s)	272, 758, 1275
SfaNI	GCATC	5 cut(s)	109, 414, 910, 910, 1358
SfoI	GGCGCC	1 cut(s)	286
SfuI	TTCGAA	1 cut(s)	713
SgrAI	CRCCGGYG	1 cut(s)	656
SgrDI	CGTCGACG	1 cut(s)	1100
SinI	GGWCC	1 cut(s)	431
SmiMI	CAYNNNNRTG	2 cut(s)	1256, 1268
Sse9I	AATT	3 cut(s)	94, 1320, 1355
SspDI	GGCGCC	1 cut(s)	284
SspMI	CTAG	2 cut(s)	522, 728
StyD4I	CCNGG	3 cut(s)	270, 756, 1273
TaaI	ACNGT	1 cut(s)	1339
TaiI	ACGT	6 cut(s)	186, 377, 462, 1101, 1107, 1575
TaqI	TCGA	7 cut(s)	153, 264, 713, 984, 1101, 1109, 1295
TasI	AATT	3 cut(s)	94, 1320, 1355
TauI	GCSGC	6 cut(s)	363, 500, 769, 871, 890, 926
TfiI	GAWTC	7 cut(s)	54, 445, 775, 896, 1231, 1597, 1612
Tru1I	TTAA	2 cut(s)	566, 1644
Tru9I	TTAA	2 cut(s)	566, 1644
TscAI	CASTG	3 cut(s)	296, 310, 1351
TseFI	GTSAC	3 cut(s)	58, 397, 592
TseI	GCWGC	2 cut(s)	1193, 1220
Tsp45I	GTSAC	3 cut(s)	58, 397, 592
TspDTI	ATGAA	4 cut(s)	395, 688, 1076, 1171
TspGWI	ACGGA	8 cut(s)	16, 160, 250, 727, 837, 1332, 1392, 1493
TspRI	CASTG	3 cut(s)	296, 310, 1351
Van91I	CCANNNNNTGG	1 cut(s)	45
VpaK11BI	GGWCC	1 cut(s)	431
XagI	CCTNNNNNAGG	1 cut(s)	587
XapI	RAATTY	1 cut(s)	1320
XcmI	CCANNNNNNNNNTGG	2 cut(s)	46, 1209
XmiI	GTMKAC	3 cut(s)	678, 851, 1101
XmnI	GAANNNNTTC	1 cut(s)	719
XspI	CTAG	2 cut(s)	522, 728
ZraI	GACGTC	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.