Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0013612

Physical Location & Seq

Genomic Coordinates Reverse (-)

26337105 .. 26342714

Gene Structure 5610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1135100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGGGTAAGGTAGTGGAGAGGAAGAAGAAGAAAGGACGGCCCTCTCTTTTGGATCTTCAAAAAAGGACTCTCAGAGAGCAGCAGGAGCAATTGCAACAGCAGCAGAAGCGAAAGCCCAACTCTGCCCCTCATTCCAACCCTAATTACAGGACTGCTCCTGCCGACTCTGCCCGCGCTTCCCTGCGTCGATCCACCCGCCGCAACCCTGACCCCGACGGTAATTCAAACGACGAAGAGGAGGATGAAGACGAAGACGAATACGCTTCGGCCGGGAAGCGCCGCGAGAAAAAACTCAAGCTCGTCCTCAAATTGCCCCCCAACAATCAGAAATCGTCGGCCAATTCCGCGACTCGGAACTCCCACGGCGGCGGCTCCGAGTCCAATGACGACGACGACGGCGACTACAGAACCGACCGGAAGCGCAAGATCAATGCGATCGGCGATGGATCTGGTCTCGCTCACCCTCAAAAGGGTGAGAAATCAATTCCTGCTGCAAACCCACCAAGCAGCCTCCAAGGAGTGGCTACAACGTTGGACCCTGGACCCTCTACCCCTTTGCCTGATAAAAAGTTGCTGCTGTTCGTTCTCGACAGGCTCCAAAAGAAGGACACGTACGGAGTGTTTTCTGAACCAGTGGACCCAAAAGAGCTCCCGGACTACCATGAAGTAATAGAGCACCCTATGGATTTCGGGACGGTGAAGAAGAAACTTACGAGTGGAGTGTACTCCAGTTTGGAACAGTTTGAGGATGATATTTTCTTAATCTGCTCCAATGCGATGCAGTACAATGCCCCAGATACCATATATTTTCGACAGGCACGCTCAATACAAGAGCTTGCGAAAAAGAATTTTGAAAATTTGAGGCAAGACAGTGATGATAATGAATCAGGACCAAAGGTCGTAAGAAGAGGTAGACCACCAACAAAAAATTTGCATAAAAAACTGGGCAGGCCTTCCCTGGACCGTGCTGGTTCAGAGTTCTCACATGCCACTCTTGCTACTGGGGCTGAAAACGCCACATTGGATCATAAAAAAGGATCTCATCTTTCAGACAAGTCTGGTTTGACAGGTTCACGGAATAATGATGTTTATACTAATTGGTTGACGGATAACAAGTTTGAGAGGAATGATGACGTCACAGGTTTCACGAAGGCTAATTTGAAGCTAGGGAAAAAACATTTTGTGTTTGATGAGAACAGGCGTAATACATATAATCAATCTCATCCTTCAGCCAGTGGACAAGAGTCATCTGTATTGACTACATTTGATGGAGAAAGGAAACAGCTAATGGCTGTAGGGCTTCACTCGGACTATGGTTATGCAAGGAGCCTGGCTCGATTTGCTGCAAATCTTGGACCTGTTGCATGGAACATTGCTGCAAAGAAGATTGAAAGGTCTTTGCCCCCTGGTGTTAAGTTCGGCCCAGGGTGGATTGGAGAAAATGATGTTGCGCCAAATAGGCCACTGCAATTAGCCTCAGCCTCACTAGGTCAGCCATCTTCATCAGAGCCCTTTCCCATTCGTCCAAATGCATCTTCTGCTGCAACATCTTACTCTGTTGAGTCTAACGGAGATAAATTGTCAGAGAAGTTGTCGGGGCATAACTCTTCAGAGAAGCCATTGGGACATAACTCATCAGAGAAGCATGTGCCTTCTATTCCTTCAGCAAATACAAGCAGTCCTCTTCCTCTGTCTGCTGCTACCTCATCACCCCCCATTGTTGCCAATAAATCTCCTGAACCCCTCCCTGGAAAAGTAGAAACTGCTGAAGGATCAAACGCTCATACTGGGTTTAATATGCCGAGCAGCAATCTTGGTGTAATGAGACCGAAGTCTCCATTTCAGATCCATCAGAATTCTGTATTCCGACCTGGGATCAACGGATTTAACGGCACATACGGATTAAACATTCCTGCTCAGATGGGAAAGCCAGTTGGAGTGGCCAGGCCCGGTGGTTTTAACTTCCAGCCGTCTCAAATGCTCGACTCAGTCTCTAGGACTAACGCTAACTTCCATCCAGCTACTTCAAACAGCTTAACTTCAGAAGAAACTAAACTCTCCAAAACTCCAGGTACAATAAGCTCTTCCAGTTCATTTCCAAATTCAGTGAATGAGGCAACGGCAGCTCGGACAATGGGAACTCGTCCTCGGCCATCTTGGCAAGGGTTGTCACAACAGCAGAAAGCCAGTTCAGCATTGTCGCCACAACAAAAGCCCGACTCAGTTCCACCAGACCTGAATGTGAGGTTCCAGTCCCCAGGGTCCCCTAGTTCTAGCCGGGCTGATTCAGCGCAGCCGGATTTAGCATTGCAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

773

Amino Acids

83.86

Weight (kDa)

9.4

Isoelectric Point (pI)

53.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	193 - 274	2.5e-25	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013612)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16690
malus_domestica	MD05G1135100.v1.1 MD10G1140600.v1.1
prunus_persica	Prupe.8G179000_v2.0.a1
pyrus_communis	pycom05g13170 pycom10g11920
rosa_chinensis	RchiOBHm_Chr6g0280831
rosa_laevigata	RLG00000013027
rosa_multiflora	Rmu_co8368811.1_g000001 Rmu_sc0003153.1_g000023 Rmu_sc0038972.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187590
rosa_rugosa	Rorug06G0134800
rosa_samantha	Rh6AG248200 Rh6BG249700 Rh6CG250900 Rh6DG242500
rosa_wichuraiana	Rw6G021450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1137
AccB7I	CCANNNNNTGG	1 cut(s)	520
AccI	GTMKAC	1 cut(s)	913
AccII	CGCG	3 cut(s)	174, 282, 347
AciI	CCGC	7 cut(s)	172, 196, 199, 280, 345, 366, 369
AclI	AACGTT	1 cut(s)	530
AclWI	GGATC	8 cut(s)	60, 183, 454, 1032, 1045, 1780, 1840, 1883
AcoI	YGGCCR	4 cut(s)	267, 336, 1941, 2150
AcsI	RAATTY	5 cut(s)	847, 856, 928, 1855, 2101
AcuI	CTGAAG	5 cut(s)	1212, 1593, 1647, 1788, 2025
AcyI	GRCGYC	1 cut(s)	1134
AfaI	GTAC	4 cut(s)	614, 725, 785, 2074
AfiI	CCNNNNNNNGG	6 cut(s)	351, 469, 470, 520, 604, 1748
AflIII	ACRYGT	1 cut(s)	609
AgsI	TTSAA	6 cut(s)	59, 225, 854, 1162, 1391, 2028
AhdI	GACNNNNNGTC	1 cut(s)	896
AjuI	GAANNNNNNNTTGG	2 cut(s)	1519, 1551
Alw21I	GWGCWC	2 cut(s)	651, 678
Alw26I	GTCTC	5 cut(s)	458, 1819, 1839, 1977, 1996
AlwI	GGATC	8 cut(s)	60, 183, 454, 1032, 1045, 1780, 1840, 1883
AoxI	GGCC	9 cut(s)	38, 267, 336, 950, 1420, 1460, 1941, 1946, 2150
ApoI	RAATTY	5 cut(s)	847, 856, 928, 1855, 2101
AspLEI	GCGC	5 cut(s)	176, 279, 423, 1453, 2293
AsuC2I	CCSGG	4 cut(s)	271, 653, 1950, 2279
AsuHPI	GGTGA	4 cut(s)	452, 485, 709, 1701
AvaII	GGWCC	7 cut(s)	535, 542, 637, 890, 961, 1355, 2262
BalI	TGGCCA	1 cut(s)	1943
BanII	GRGCYC	2 cut(s)	651, 1512
BarI	GAAGNNNNNNTAC	2 cut(s)	596, 628
BbsI	GAAGAC	2 cut(s)	252, 258
Bbv12I	GWGCWC	2 cut(s)	651, 678
BbvCI	CCTCAGC	1 cut(s)	1477
BccI	CCATC	7 cut(s)	437, 1262, 1504, 1857, 1915, 2022, 2161
BceAI	ACGGC	6 cut(s)	53, 379, 412, 1906, 1954, 2136
BcnI	CCSGG	4 cut(s)	271, 653, 1950, 2279
BcoDI	GTCTC	5 cut(s)	458, 1819, 1839, 1977, 1996
BfaI	CTAG	5 cut(s)	1166, 1487, 1995, 2268, 2274
BfmI	CTRYAG	2 cut(s)	403, 1293
BfoI	RGCGCY	1 cut(s)	280
BglI	GCCNNNNNGGC	2 cut(s)	1459, 2158
Bme18I	GGWCC	7 cut(s)	535, 542, 637, 890, 961, 1355, 2262
BmeRI	GACNNNNNGTC	1 cut(s)	896
BmiI	GGNNCC	9 cut(s)	373, 537, 544, 596, 639, 1328, 2249, 2263, 2264
BmrI	ACTGGG	3 cut(s)	953, 1011, 1797
BmsI	GCATC	2 cut(s)	768, 1541
BmuI	ACTGGG	3 cut(s)	953, 1011, 1797
BoxI	GACNNNNGTC	2 cut(s)	1243, 1831
BpiI	GAAGAC	2 cut(s)	252, 258
BplI	GAGNNNNNCTC	2 cut(s)	1318, 1350
BpmI	CTGGAG	2 cut(s)	712, 2052
Bpu10I	CCTNAGC	1 cut(s)	1477
BpuEI	CTTGAG	1 cut(s)	278
BpuMI	CCSGG	4 cut(s)	271, 653, 1950, 2279
BsaAI	YACGTR	1 cut(s)	612
BsaHI	GRCGYC	1 cut(s)	1134
BsaI	GGTCTC	2 cut(s)	458, 1819
BsaWI	WCCGGW	1 cut(s)	414
Bsc4I	CCNNNNNNNGG	6 cut(s)	351, 469, 470, 520, 604, 1748
Bse3DI	GCAATG	2 cut(s)	1371, 2306
BseGI	GGATG	4 cut(s)	247, 754, 1222, 2014
BseLI	CCNNNNNNNGG	6 cut(s)	351, 469, 470, 520, 604, 1748
BseMI	GCAATG	2 cut(s)	1371, 2306
BseMII	CTCAG	5 cut(s)	85, 1491, 1931, 2001, 2235
BseRI	GAGGAG	1 cut(s)	251
BseX3I	CGGCCG	1 cut(s)	267
Bsh1236I	CGCG	3 cut(s)	174, 282, 347
Bsh1285I	CGRYCG	3 cut(s)	270, 415, 438
BshFI	GGCC	9 cut(s)	40, 269, 338, 952, 1422, 1462, 1943, 1948, 2152
BsiEI	CGRYCG	3 cut(s)	270, 415, 438
BsiHKAI	GWGCWC	2 cut(s)	651, 678
BsiSI	CCGG	6 cut(s)	270, 415, 653, 1950, 2278, 2297
BsiWI	CGTACG	1 cut(s)	612
BslFI	GGGAC	4 cut(s)	706, 1638, 2239, 2248
BslI	CCNNNNNNNGG	6 cut(s)	351, 469, 470, 520, 604, 1748
BsmAI	GTCTC	5 cut(s)	458, 1819, 1839, 1977, 1996
BsmBI	CGTCTC	1 cut(s)	1977
BsmFI	GGGAC	4 cut(s)	706, 1638, 2239, 2248
BsnI	GGCC	9 cut(s)	40, 269, 338, 952, 1422, 1462, 1943, 1948, 2152
Bso31I	GGTCTC	2 cut(s)	458, 1819
Bsp1286I	GDGCHC	3 cut(s)	651, 678, 1512
BspACI	CCGC	7 cut(s)	172, 196, 199, 280, 345, 366, 369
BspANI	GGCC	9 cut(s)	40, 269, 338, 952, 1422, 1462, 1943, 1948, 2152
BspCNI	CTCAG	5 cut(s)	84, 1490, 1930, 2000, 2234
BspFNI	CGCG	3 cut(s)	174, 282, 347
BspLI	GGNNCC	9 cut(s)	373, 537, 544, 596, 639, 1328, 2249, 2263, 2264
BspPI	GGATC	8 cut(s)	60, 183, 454, 1032, 1045, 1780, 1840, 1883
BspQI	GCTCTTC	1 cut(s)	2089
BspTNI	GGTCTC	2 cut(s)	458, 1819
BsrDI	GCAATG	2 cut(s)	1371, 2306
BssNI	GRCGYC	1 cut(s)	1134
BssT1I	CCWWGG	1 cut(s)	514
Bst4CI	ACNGT	5 cut(s)	218, 697, 741, 872, 965
Bst6I	CTCTTC	5 cut(s)	228, 901, 1612, 1689, 2089
BstACI	GRCGYC	1 cut(s)	1134
BstAPI	GCANNNNNTGC	1 cut(s)	1538
BstBAI	YACGTR	1 cut(s)	612
BstC8I	GCNNGC	4 cut(s)	172, 820, 837, 950
BstDEI	CTNAG	5 cut(s)	71, 1477, 1917, 1987, 2221
BstDSI	CCRYGG	1 cut(s)	361
BstF5I	GGATG	4 cut(s)	247, 754, 1222, 2014
BstFNI	CGCG	3 cut(s)	174, 282, 347
BstH2I	RGCGCY	1 cut(s)	280
BstHHI	GCGC	5 cut(s)	176, 279, 423, 1453, 2293
BstMAI	GTCTC	5 cut(s)	458, 1819, 1839, 1977, 1996
BstMCI	CGRYCG	3 cut(s)	270, 415, 438
BstNSI	RCATGY	2 cut(s)	989, 1649
BstPAI	GACNNNNGTC	2 cut(s)	1243, 1831
BstSFI	CTRYAG	2 cut(s)	403, 1293
BstUI	CGCG	3 cut(s)	174, 282, 347
BstV2I	GAAGAC	2 cut(s)	252, 258
BstX2I	RGATCY	4 cut(s)	52, 446, 1037, 1845
BstYI	RGATCY	4 cut(s)	52, 446, 1037, 1845
BstZI	CGGCCG	1 cut(s)	267
BsuRI	GGCC	9 cut(s)	40, 269, 338, 952, 1422, 1462, 1943, 1948, 2152
BtgI	CCRYGG	1 cut(s)	361
BtgZI	GCGATG	2 cut(s)	456, 791
BtsCI	GGATG	4 cut(s)	247, 754, 1222, 2014
BtsI	GCAGTG	1 cut(s)	1463
BtsIMutI	CAGTG	5 cut(s)	639, 877, 1240, 1463, 2112
Cac8I	GCNNGC	4 cut(s)	172, 820, 837, 950
CfoI	GCGC	5 cut(s)	176, 279, 423, 1453, 2293
CseI	GACGC	1 cut(s)	173
Csp6I	GTAC	4 cut(s)	613, 724, 784, 2073
CviAII	CATG	4 cut(s)	662, 986, 1365, 1646
CviQI	GTAC	4 cut(s)	613, 724, 784, 2073
DdeI	CTNAG	5 cut(s)	71, 1477, 1917, 1987, 2221
DriI	GACNNNNNGTC	1 cut(s)	896
EaeI	YGGCCR	4 cut(s)	267, 336, 1941, 2150
EagI	CGGCCG	1 cut(s)	267
Eam1104I	CTCTTC	5 cut(s)	228, 901, 1612, 1689, 2089
Eam1105I	GACNNNNNGTC	1 cut(s)	896
EarI	CTCTTC	5 cut(s)	228, 901, 1612, 1689, 2089
Ecl136II	GAGCTC	1 cut(s)	649
EclXI	CGGCCG	1 cut(s)	267
Eco130I	CCWWGG	1 cut(s)	514
Eco147I	AGGCCT	1 cut(s)	952
Eco24I	GRGCYC	2 cut(s)	651, 1512
Eco31I	GGTCTC	2 cut(s)	458, 1819
Eco47I	GGWCC	7 cut(s)	535, 542, 637, 890, 961, 1355, 2262
Eco52I	CGGCCG	1 cut(s)	267
Eco53kI	GAGCTC	1 cut(s)	649
Eco57I	CTGAAG	5 cut(s)	1212, 1593, 1647, 1788, 2025
EcoICRI	GAGCTC	1 cut(s)	649
EcoO109I	RGGNCCY	1 cut(s)	2262
EcoRI	GAATTC	1 cut(s)	1855
EcoT14I	CCWWGG	1 cut(s)	514
EcoT22I	ATGCAT	1 cut(s)	1534
EcoT38I	GRGCYC	2 cut(s)	651, 1512
ErhI	CCWWGG	1 cut(s)	514
Esp3I	CGTCTC	1 cut(s)	1977
FaeI	CATG	4 cut(s)	665, 989, 1368, 1649
FaqI	GGGAC	4 cut(s)	706, 1638, 2239, 2248
FatI	CATG	4 cut(s)	661, 985, 1364, 1645
FauI	CCCGC	2 cut(s)	179, 203
FblI	GTMKAC	1 cut(s)	913
FokI	GGATG	4 cut(s)	254, 761, 1209, 2001
FriOI	GRGCYC	2 cut(s)	651, 1512
FspBI	CTAG	5 cut(s)	1166, 1487, 1995, 2268, 2274
GlaI	GCGC	5 cut(s)	175, 278, 422, 1452, 2292
GsuI	CTGGAG	2 cut(s)	712, 2052
HaeII	RGCGCY	1 cut(s)	280
HaeIII	GGCC	9 cut(s)	40, 269, 338, 952, 1422, 1462, 1943, 1948, 2152
HapII	CCGG	6 cut(s)	270, 415, 653, 1950, 2278, 2297
HgaI	GACGC	1 cut(s)	173
HhaI	GCGC	5 cut(s)	176, 279, 423, 1453, 2293
Hin1I	GRCGYC	1 cut(s)	1134
Hin1II	CATG	4 cut(s)	665, 989, 1368, 1649
Hin6I	GCGC	5 cut(s)	174, 277, 421, 1451, 2291
HinP1I	GCGC	5 cut(s)	174, 277, 421, 1451, 2291
HincII	GTYRAC	1 cut(s)	1104
HindII	GTYRAC	1 cut(s)	1104
HpaII	CCGG	6 cut(s)	270, 415, 653, 1950, 2278, 2297
HphI	GGTGA	4 cut(s)	452, 485, 709, 1701
Hpy166II	GTNNAC	6 cut(s)	637, 724, 914, 1073, 1104, 1238
Hpy188III	TCNNGA	5 cut(s)	587, 691, 888, 1147, 1736
Hpy8I	GTNNAC	6 cut(s)	637, 724, 914, 1073, 1104, 1238
Hpy99I	CGWCG	7 cut(s)	189, 218, 233, 337, 392, 395, 398
HpyAV	CCTTC	7 cut(s)	598, 963, 1144, 1236, 1662, 1671, 1763
HpyCH4III	ACNGT	5 cut(s)	218, 697, 741, 872, 965
HpyCH4IV	ACGT	3 cut(s)	530, 611, 1134
HpyF3I	CTNAG	5 cut(s)	71, 1477, 1917, 1987, 2221
HpySE526I	ACGT	3 cut(s)	530, 611, 1134
Hsp92I	GRCGYC	1 cut(s)	1134
Hsp92II	CATG	4 cut(s)	665, 989, 1368, 1649
HspAI	GCGC	5 cut(s)	174, 277, 421, 1451, 2291
KflI	GGGWCCC	1 cut(s)	2262
LguI	GCTCTTC	1 cut(s)	2089
LmnI	GCTCC	7 cut(s)	85, 160, 377, 600, 654, 773, 1326
LweI	GCATC	2 cut(s)	768, 1541
MaeI	CTAG	5 cut(s)	1166, 1487, 1995, 2268, 2274
MaeII	ACGT	3 cut(s)	530, 611, 1134
MaeIII	GTNAC	2 cut(s)	1135, 2169
MfeI	CAATTG	1 cut(s)	89
MflI	RGATCY	4 cut(s)	52, 446, 1037, 1845
MhlI	GDGCHC	3 cut(s)	651, 678, 1512
MlsI	TGGCCA	1 cut(s)	1943
MluNI	TGGCCA	1 cut(s)	1943
MlyI	GAGTC	8 cut(s)	61, 158, 343, 386, 1253, 1571, 1979, 2213
MmeI	TCCRAC	4 cut(s)	159, 513, 1891, 1915
Mox20I	TGGCCA	1 cut(s)	1943
Mph1103I	ATGCAT	1 cut(s)	1534
MscI	TGGCCA	1 cut(s)	1943
MseI	TTAA	7 cut(s)	761, 1413, 1794, 1887, 1904, 1959, 2036
Msp20I	TGGCCA	1 cut(s)	1943
MspI	CCGG	6 cut(s)	270, 415, 653, 1950, 2278, 2297
MunI	CAATTG	1 cut(s)	89
MvnI	CGCG	3 cut(s)	174, 282, 347
NciI	CCSGG	4 cut(s)	271, 653, 1950, 2279
NlaIII	CATG	4 cut(s)	665, 989, 1368, 1649
NlaIV	GGNNCC	9 cut(s)	373, 537, 544, 596, 639, 1328, 2249, 2263, 2264
NmeAIII	GCCGAG	2 cut(s)	1827, 2128
NmuCI	GTSAC	2 cut(s)	1135, 2169
NsiI	ATGCAT	1 cut(s)	1534
NspI	RCATGY	2 cut(s)	989, 1649
PasI	CCCWGGG	2 cut(s)	1424, 2258
PceI	AGGCCT	1 cut(s)	952
PciSI	GCTCTTC	1 cut(s)	2089
PcsI	WCGNNNNNNNCGW	1 cut(s)	396
PfeI	GAWTC	2 cut(s)	884, 2285
Pfl23II	CGTACG	1 cut(s)	612
PflFI	GACNNNGTC	1 cut(s)	1988
PflMI	CCANNNNNTGG	1 cut(s)	520
PfoI	TCCNGGA	1 cut(s)	651
Ple19I	CGATCG	1 cut(s)	438
PleI	GAGTC	8 cut(s)	61, 158, 343, 385, 1252, 1570, 1979, 2213
PpsI	GAGTC	8 cut(s)	61, 158, 343, 385, 1252, 1570, 1979, 2213
Ppu21I	YACGTR	1 cut(s)	612
PpuMI	RGGWCCY	1 cut(s)	2262
PshAI	GACNNNNGTC	2 cut(s)	1243, 1831
Psp124BI	GAGCTC	1 cut(s)	651
Psp1406I	AACGTT	1 cut(s)	530
Psp5II	RGGWCCY	1 cut(s)	2262
PspLI	CGTACG	1 cut(s)	612
PspN4I	GGNNCC	9 cut(s)	373, 537, 544, 596, 639, 1328, 2249, 2263, 2264
PspPPI	RGGWCCY	1 cut(s)	2262
PsuI	RGATCY	4 cut(s)	52, 446, 1037, 1845
PsyI	GACNNNGTC	1 cut(s)	1988
PvuI	CGATCG	1 cut(s)	438
RsaI	GTAC	4 cut(s)	614, 725, 785, 2074
RsaNI	GTAC	4 cut(s)	613, 724, 784, 2073
SacI	GAGCTC	1 cut(s)	651
SapI	GCTCTTC	1 cut(s)	2089
SaqAI	TTAA	7 cut(s)	761, 1413, 1794, 1887, 1904, 1959, 2036
SchI	GAGTC	8 cut(s)	61, 158, 343, 386, 1253, 1571, 1979, 2213
SduI	GDGCHC	3 cut(s)	651, 678, 1512
SfaNI	GCATC	2 cut(s)	768, 1541
SfcI	CTRYAG	2 cut(s)	403, 1293
SinI	GGWCC	7 cut(s)	535, 542, 637, 890, 961, 1355, 2262
SmlI	CTYRAG	1 cut(s)	293
SmoI	CTYRAG	1 cut(s)	293
SseBI	AGGCCT	1 cut(s)	952
SsiI	CCGC	7 cut(s)	172, 196, 199, 280, 345, 366, 369
SspMI	CTAG	5 cut(s)	1166, 1487, 1995, 2268, 2274
SstI	GAGCTC	1 cut(s)	651
StuI	AGGCCT	1 cut(s)	952
StyI	CCWWGG	1 cut(s)	514
TaaI	ACNGT	5 cut(s)	218, 697, 741, 872, 965
TaiI	ACGT	3 cut(s)	533, 614, 1137
TaqI	TCGA	5 cut(s)	187, 588, 811, 1336, 1983
TaqII	GACCGA	1 cut(s)	1843
TatI	WGTACW	2 cut(s)	723, 783
TauI	GCSGC	4 cut(s)	201, 282, 369, 372
TfiI	GAWTC	2 cut(s)	884, 2285
Tru1I	TTAA	7 cut(s)	761, 1413, 1794, 1887, 1904, 1959, 2036
Tru9I	TTAA	7 cut(s)	761, 1413, 1794, 1887, 1904, 1959, 2036
TscAI	CASTG	5 cut(s)	639, 877, 1240, 1470, 2112
TseFI	GTSAC	2 cut(s)	1135, 2169
Tsp45I	GTSAC	2 cut(s)	1135, 2169
TspDTI	ATGAA	5 cut(s)	258, 678, 897, 1491, 2082
TspGWI	ACGGA	6 cut(s)	630, 1090, 1121, 1584, 1896, 1914
TspRI	CASTG	5 cut(s)	639, 877, 1240, 1470, 2112
Tth111I	GACNNNGTC	1 cut(s)	1988
Van91I	CCANNNNNTGG	1 cut(s)	520
VpaK11BI	GGWCC	7 cut(s)	535, 542, 637, 890, 961, 1355, 2262
XapI	RAATTY	5 cut(s)	847, 856, 928, 1855, 2101
XceI	RCATGY	2 cut(s)	989, 1649
XmiI	GTMKAC	1 cut(s)	913
XspI	CTAG	5 cut(s)	1166, 1487, 1995, 2268, 2274
ZraI	GACGTC	1 cut(s)	1135
Zsp2I	ATGCAT	1 cut(s)	1534

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.