Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0013612

Physical Location & Seq

Genomic Coordinates Reverse (-)

18012136 .. 18017913

Gene Structure 5778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G179000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGGTAAGGTAGTGGAGAGGAAGAAGAAGAAGAAAGGACGGCCCTCTCTTTTAGATCTTCAAAAACGGACTCTCAGAGAACAAGAGGAGCAGCTGCAGCAACAACAACAACAGCAGCAGAAGCGCAAAAACAACTCTGCCCGTCATTCCAACCCTAATTACAAGACTGCCCCTGCCGACTCCGCCAAGGCTCCGGTTCGTCGATCCACCCGCCGCAACCCTAACCCCGACGATAACGAGGACGAGGACGACGGCGAAGATGAGGACGACGACGTTTTGGCCGGGAAGCGACGCGAGAAAAAGCTCAAGCTCGTCCTCAAATTGCCTCCTAATCAGAAATCGTCGGCCAATTCCGCGTCTTTGAACTCTGGCGGCTCCGAGTCCAACGCCGATGGCGATAACGCTGCGCCGGAGGTCGATAAGAAGCGCAAAATCAATGCGATCGGCGATGGATCTGGGCTCGCTCACCCTCAGAAGGGTGAGAAGACAATTTCAGCTACAAACCCTTCAAGCGCCCTCCAAGGAGGGACAGCGTTGGATTCTGAACCCTCTACGCCTTTACCTGATAAAAAGCTGTTGCTGTTCGTTCTCGACAGGCTTCAAAAGAAGGACACGTACGGTGTGTTTTCTGAACCAGTGGACCCCAAAGAGCTTCCGGACTACCATGAAGTAATAGAGCATCCTATGGATTTTGGGACGGTGAAGAAGAAACTTACTAGTGGAGTGTATACTAGCTTGGAACGGTTTGAGAGTGATATCTTCTTAATCTGCTCCAATGCAATGCAGTACAATGCTCCAGATACCATATATTTTCGGCAGGCGCGCTCCATACATGAGCTAGCAAAAAAGAATTTTGATAATTTGAGACAAGATAGTGATGATAATGAGCCAGGACCCAAGGTTGTAAGAAGAGGTAGACCACCGACCAAAAATTTGAAAAAACCACTGGGCAGGCCTTCCTTGGAGCGTGCTGGTTCAGAGTTCTCAGATGCCACTCTTGCTACTGGGGCAGAAAATGCGAATTATGATCTGAGAAAAGGACCTCATTTTTCGGACAAGTCTGGTTTAGCAGATTCATCGGGGAGATTCCATGGTTCACGAAATAATGATGTTTATACTAGTTGGTTAGCTGATAACAAATTTGAGAGGAATGATGACTTCACAGGTTCCATGTTGCGGGGTAATTCGAAGCTTGGGAGAAAACAATTTGTTTTTGATGAGAACAGGCGCAATACATATAATCAATCTCACCCTTCAGCTGGTGGACGAGAGTCATCAGTGTTGACTACATTTGATAGAGAAAGGAAACAGCTAATGGCTGTAGGGCTTCACTCAGACTATGGTTATGCAAGGAGCCTGACCCGATTTGCTGCAAATATTGGACCTGTTGCTTGGAACATTGCTGCAAAGAAGATTGAAAGGTCTTTGCCCCCTGGTGTTAAGTTTGGCCCTGGGTGGGTTGGAGAAAATGATGTTGTGCCACATAGGCCACTGCTATTGGACTCAACTTCACTAGGGCAGCCATATTCATCAGAGCTCATTCCCATCCGTGCAAATTCATCTTCTGCTGCAACATCTTGCTCTGTTGAGCCTAAGGGAGATAAATCATCAGACAAGCCTTCAGGACATAACTCATCAGAAAAGCGTGTGCCTTCTGTTCCTTCAGCGCTGGAAGGCCATATAAGCAGGCCTCCTCCTCTGGCTGCTGCTACCTCATCACCCCATGTAGCCGCTAATAAATCTCCTGAACCCCTCACTGGAAAAGCAGAAACTGTTGAAGGATCGAACTCTCGTACTGGGTTTAATATGAGCAGCAATCTTGGTGTAATTAGGCCAAGACCTCCATTTCAGATCCATCAAAATTCTGTAATCCAACCCGGGATCAATGGATTTAATGGAGCATATGGATTGAACCTTCCTGCTCAGATGGGAAAGCTAGTTGGATTGGCCAGGCCTGGTGGTTTTAACTTCCAGTCATCTCAAATGCTTGATACAGTCTCTAGGACTAATAGTGGCTTCATCCAACCATCAGCGTCAACCAGCTTAAATTCAGAAGAAACAAAGTTTTCTGAAAATTCGGGTACGATAAACTCTTCCGGTTCATATCCAAATTCTGTGAAAGAGGCACTGGCAGCCCGGACATTGGGGATTCCTCCCCGGCCGTCTTTGCTAGGCTTGTCACAACAGCAGAAACCCGATTCAGGATTGTCACCACAACAAAAACCCGATTCAGTTCCACCAGATCTGAACGTCAGATTTCAGTCCCCAGGTTCTCCTAGTTCTAGCCGGACTGATTCAGCGCAGCCAGATTTAGCATTGCAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

776

Amino Acids

84.3

Weight (kDa)

9.38

Isoelectric Point (pI)

53.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013612)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16690
malus_domestica	MD05G1135100.v1.1 MD10G1140600.v1.1
prunus_persica	Prupe.8G179000_v2.0.a1
pyrus_communis	pycom05g13170 pycom10g11920
rosa_chinensis	RchiOBHm_Chr6g0280831
rosa_laevigata	RLG00000013027
rosa_multiflora	Rmu_co8368811.1_g000001 Rmu_sc0003153.1_g000023 Rmu_sc0038972.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187590
rosa_rugosa	Rorug06G0134800
rosa_samantha	Rh6AG248200 Rh6BG249700 Rh6CG250900 Rh6DG242500
rosa_wichuraiana	Rw6G021450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	728, 916
AccII	CGCG	3 cut(s)	294, 356, 823
AccIII	TCCGGA	1 cut(s)	655
AciI	CCGC	7 cut(s)	183, 211, 214, 354, 372, 1177, 1731
AclWI	GGATC	5 cut(s)	198, 460, 1789, 1846, 1889
AcoI	YGGCCR	4 cut(s)	279, 345, 1947, 2159
AcsI	RAATTY	8 cut(s)	850, 931, 1139, 1555, 1861, 2047, 2074, 2110
AcuI	CTGAAG	3 cut(s)	1239, 1605, 1647
AfaI	GTAC	4 cut(s)	617, 788, 1795, 2083
AfeI	AGCGCT	1 cut(s)	1668
AfiI	CCNNNNNNNGG	8 cut(s)	475, 476, 1176, 1259, 1456, 1757, 2143, 2201
AflIII	ACRYGT	1 cut(s)	612
AgsI	TTSAA	8 cut(s)	62, 364, 510, 602, 937, 1418, 1778, 1912
AhlI	ACTAGT	2 cut(s)	716, 1118
AjnI	CCWGG	6 cut(s)	889, 1432, 1450, 1949, 1954, 2266
Alw21I	GWGCWC	1 cut(s)	1539
Alw26I	GTCTC	2 cut(s)	859, 2002
AlwI	GGATC	5 cut(s)	198, 460, 1789, 1846, 1889
AlwNI	CAGNNNCTG	1 cut(s)	1772
Ama87I	CYCGRG	1 cut(s)	1877
Aor13HI	TCCGGA	1 cut(s)	655
Aor51HI	AGCGCT	1 cut(s)	1668
ApoI	RAATTY	8 cut(s)	850, 931, 1139, 1555, 1861, 2047, 2074, 2110
ArsI	GACNNNNNNTTYG	2 cut(s)	916, 948
AspLEI	GCGC	9 cut(s)	126, 409, 429, 515, 823, 825, 1230, 1669, 2302
AspS9I	GGNCC	6 cut(s)	42, 640, 893, 1040, 1382, 1448
AsuC2I	CCSGG	5 cut(s)	283, 1878, 1879, 2137, 2158
AsuHPI	GGTGA	6 cut(s)	458, 491, 712, 1241, 1710, 2202
AsuII	TTCGAA	1 cut(s)	1187
AsuNHI	GCTAGC	1 cut(s)	838
AvaI	CYCGRG	1 cut(s)	1877
AvaII	GGWCC	4 cut(s)	640, 893, 1040, 1382
AxyI	CCTNAGG	1 cut(s)	1593
BalI	TGGCCA	1 cut(s)	1949
BanII	GRGCYC	2 cut(s)	462, 1539
BarI	GAAGNNNNNNTAC	2 cut(s)	599, 631
BbsI	GAAGAC	1 cut(s)	491
Bbv12I	GWGCWC	1 cut(s)	1539
BccI	CCATC	6 cut(s)	386, 443, 1553, 1863, 1921, 2035
BceAI	ACGGC	3 cut(s)	56, 268, 2146
BcgI	CGANNNNNNTGC	4 cut(s)	386, 420, 1059, 1093
BciT130I	CCWGG	6 cut(s)	891, 1434, 1452, 1951, 1956, 2268
BcnI	CCSGG	5 cut(s)	283, 1878, 1879, 2137, 2158
BcoDI	GTCTC	2 cut(s)	859, 2002
BcuI	ACTAGT	2 cut(s)	716, 1118
BfmI	CTRYAG	2 cut(s)	95, 1320
BfoI	RGCGCY	2 cut(s)	516, 1670
BglI	GCCNNNNNGGC	1 cut(s)	1486
BglII	AGATCT	2 cut(s)	55, 2242
Bme18I	GGWCC	4 cut(s)	640, 893, 1040, 1382
BmeT110I	CYCGRG	1 cut(s)	1877
BmgT120I	GGNCC	6 cut(s)	42, 640, 893, 1040, 1382, 1448
BmiI	GGNNCC	6 cut(s)	192, 376, 642, 895, 1168, 1355
BmrI	ACTGGG	3 cut(s)	956, 1014, 1806
BmsI	GCATC	2 cut(s)	688, 979
BmtI	GCTAGC	1 cut(s)	842
BmuI	ACTGGG	3 cut(s)	956, 1014, 1806
BoxI	GACNNNNGTC	1 cut(s)	1270
BpiI	GAAGAC	1 cut(s)	491
BpmI	CTGGAG	1 cut(s)	780
Bpu14I	TTCGAA	1 cut(s)	1187
BpuEI	CTTGAG	1 cut(s)	290
BpuMI	CCSGG	5 cut(s)	283, 1878, 1879, 2137, 2158
BsaAI	YACGTR	1 cut(s)	615
BsaWI	WCCGGW	3 cut(s)	193, 655, 2096
Bsc4I	CCNNNNNNNGG	8 cut(s)	475, 476, 1176, 1259, 1456, 1757, 2143, 2201
Bse1I	ACTGG	7 cut(s)	635, 951, 1009, 1762, 1801, 1972, 2133
Bse21I	CCTNAGG	1 cut(s)	1593
Bse3DI	GCAATG	3 cut(s)	786, 1398, 2315
BseAI	TCCGGA	1 cut(s)	655
BseBI	CCWGG	6 cut(s)	891, 1434, 1452, 1951, 1956, 2268
BseGI	GGATG	3 cut(s)	679, 1545, 2019
BseLI	CCNNNNNNNGG	8 cut(s)	475, 476, 1176, 1259, 1456, 1757, 2143, 2201
BseMI	GCAATG	3 cut(s)	786, 1398, 2315
BseMII	CTCAG	6 cut(s)	88, 485, 999, 1022, 1347, 1937
BseNI	ACTGG	7 cut(s)	635, 951, 1009, 1762, 1801, 1972, 2133
BsePI	GCGCGC	1 cut(s)	821
BseRI	GAGGAG	3 cut(s)	101, 1683, 1686
BseX3I	CGGCCG	1 cut(s)	2159
Bsh1236I	CGCG	3 cut(s)	294, 356, 823
Bsh1285I	CGRYCG	2 cut(s)	444, 2162
BsiEI	CGRYCG	2 cut(s)	444, 2162
BsiHKAI	GWGCWC	1 cut(s)	1539
BsiHKCI	CYCGRG	1 cut(s)	1877
BsiSI	CCGG	9 cut(s)	194, 282, 410, 656, 1878, 2097, 2137, 2158, 2287
BsiWI	CGTACG	1 cut(s)	615
BslFI	GGGAC	3 cut(s)	541, 709, 2248
BslI	CCNNNNNNNGG	8 cut(s)	475, 476, 1176, 1259, 1456, 1757, 2143, 2201
BsmAI	GTCTC	2 cut(s)	859, 2002
BsmFI	GGGAC	3 cut(s)	541, 709, 2248
BsoBI	CYCGRG	1 cut(s)	1877
Bsp119I	TTCGAA	1 cut(s)	1187
Bsp1286I	GDGCHC	2 cut(s)	462, 1539
Bsp13I	TCCGGA	1 cut(s)	655
Bsp143I	GATC	9 cut(s)	55, 203, 441, 452, 1027, 1781, 1851, 1881, 2242
Bsp19I	CCATGG	1 cut(s)	1090
BspACI	CCGC	7 cut(s)	183, 211, 214, 354, 372, 1177, 1731
BspCNI	CTCAG	6 cut(s)	87, 484, 998, 1023, 1346, 1936
BspEI	TCCGGA	1 cut(s)	655
BspFNI	CGCG	3 cut(s)	294, 356, 823
BspLI	GGNNCC	6 cut(s)	192, 376, 642, 895, 1168, 1355
BspMAI	CTGCAG	1 cut(s)	99
BspOI	GCTAGC	1 cut(s)	842
BspPI	GGATC	5 cut(s)	198, 460, 1789, 1846, 1889
BspT104I	TTCGAA	1 cut(s)	1187
BsrDI	GCAATG	3 cut(s)	786, 1398, 2315
BsrI	ACTGG	7 cut(s)	635, 951, 1009, 1762, 1801, 1972, 2133
BssHII	GCGCGC	1 cut(s)	821
BssMI	GATC	9 cut(s)	55, 203, 441, 452, 1027, 1781, 1851, 1881, 2242
BssNAI	GTATAC	1 cut(s)	729
BssT1I	CCWWGG	5 cut(s)	186, 520, 897, 960, 1090
Bst1107I	GTATAC	1 cut(s)	729
Bst2UI	CCWGG	6 cut(s)	891, 1434, 1452, 1951, 1956, 2268
Bst4CI	ACNGT	5 cut(s)	620, 700, 744, 1774, 1996
Bst6I	CTCTTC	2 cut(s)	904, 2098
BstAPI	GCANNNNNTGC	1 cut(s)	1016
BstBAI	YACGTR	1 cut(s)	615
BstBI	TTCGAA	1 cut(s)	1187
BstC8I	GCNNGC	7 cut(s)	462, 819, 823, 840, 953, 969, 1688
BstDEI	CTNAG	7 cut(s)	74, 471, 985, 1031, 1333, 1593, 1923
BstDSI	CCRYGG	1 cut(s)	1090
BstF5I	GGATG	3 cut(s)	679, 1545, 2019
BstFNI	CGCG	3 cut(s)	294, 356, 823
BstH2I	RGCGCY	2 cut(s)	516, 1670
BstHHI	GCGC	9 cut(s)	126, 409, 429, 515, 823, 825, 1230, 1669, 2302
BstKTI	GATC	9 cut(s)	58, 206, 444, 455, 1030, 1784, 1854, 1884, 2245
BstMAI	GTCTC	2 cut(s)	859, 2002
BstMBI	GATC	9 cut(s)	55, 203, 441, 452, 1027, 1781, 1851, 1881, 2242
BstMCI	CGRYCG	2 cut(s)	444, 2162
BstNI	CCWGG	6 cut(s)	891, 1434, 1452, 1951, 1956, 2268
BstPAI	GACNNNNGTC	1 cut(s)	1270
BstSFI	CTRYAG	2 cut(s)	95, 1320
BstUI	CGCG	3 cut(s)	294, 356, 823
BstV2I	GAAGAC	1 cut(s)	491
BstX2I	RGATCY	4 cut(s)	55, 452, 1851, 2242
BstYI	RGATCY	4 cut(s)	55, 452, 1851, 2242
BstZ17I	GTATAC	1 cut(s)	729
BstZI	CGGCCG	1 cut(s)	2159
Bsu36I	CCTNAGG	1 cut(s)	1593
BtgI	CCRYGG	1 cut(s)	1090
BtgZI	GCGATG	1 cut(s)	462
BtsCI	GGATG	3 cut(s)	679, 1545, 2019
BtsI	GCAGTG	1 cut(s)	1490
BtsIMutI	CAGTG	6 cut(s)	642, 944, 1284, 1490, 1755, 2126
Cac8I	GCNNGC	7 cut(s)	462, 819, 823, 840, 953, 969, 1688
CaiI	CAGNNNCTG	1 cut(s)	1772
CfoI	GCGC	9 cut(s)	126, 409, 429, 515, 823, 825, 1230, 1669, 2302
Cfr13I	GGNCC	6 cut(s)	42, 640, 893, 1040, 1382, 1448
Cfr9I	CCCGGG	1 cut(s)	1877
CseI	GACGC	3 cut(s)	300, 345, 2022
Csp6I	GTAC	4 cut(s)	616, 787, 1794, 2082
CspCI	CAANNNNNGTGG	2 cut(s)	1479, 1514
CviAII	CATG	5 cut(s)	665, 833, 1091, 1171, 1724
CviQI	GTAC	4 cut(s)	616, 787, 1794, 2082
DdeI	CTNAG	7 cut(s)	74, 471, 985, 1031, 1333, 1593, 1923
DpnI	GATC	9 cut(s)	57, 205, 443, 454, 1029, 1783, 1853, 1883, 2244
DpnII	GATC	9 cut(s)	55, 203, 441, 452, 1027, 1781, 1851, 1881, 2242
EaeI	YGGCCR	4 cut(s)	279, 345, 1947, 2159
EagI	CGGCCG	1 cut(s)	2159
Eam1104I	CTCTTC	2 cut(s)	904, 2098
EarI	CTCTTC	2 cut(s)	904, 2098
EciI	GGCGGA	1 cut(s)	172
Ecl136II	GAGCTC	1 cut(s)	1537
EclXI	CGGCCG	1 cut(s)	2159
Eco130I	CCWWGG	5 cut(s)	186, 520, 897, 960, 1090
Eco147I	AGGCCT	3 cut(s)	955, 1690, 1954
Eco24I	GRGCYC	2 cut(s)	462, 1539
Eco32I	GATATC	1 cut(s)	757
Eco47I	GGWCC	4 cut(s)	640, 893, 1040, 1382
Eco47III	AGCGCT	1 cut(s)	1668
Eco52I	CGGCCG	1 cut(s)	2159
Eco53kI	GAGCTC	1 cut(s)	1537
Eco57I	CTGAAG	3 cut(s)	1239, 1605, 1647
Eco81I	CCTNAGG	1 cut(s)	1593
Eco88I	CYCGRG	1 cut(s)	1877
EcoICRI	GAGCTC	1 cut(s)	1537
EcoO109I	RGGNCCY	2 cut(s)	893, 1040
EcoRII	CCWGG	6 cut(s)	889, 1432, 1450, 1949, 1954, 2266
EcoRV	GATATC	1 cut(s)	757
EcoT14I	CCWWGG	5 cut(s)	186, 520, 897, 960, 1090
EcoT38I	GRGCYC	2 cut(s)	462, 1539
ErhI	CCWWGG	5 cut(s)	186, 520, 897, 960, 1090
FaeI	CATG	5 cut(s)	668, 836, 1094, 1174, 1727
FaqI	GGGAC	3 cut(s)	541, 709, 2248
FatI	CATG	5 cut(s)	664, 832, 1090, 1170, 1723
FauI	CCCGC	2 cut(s)	218, 1170
FauNDI	CATATG	1 cut(s)	1903
FblI	GTMKAC	2 cut(s)	728, 916
FokI	GGATG	3 cut(s)	666, 1532, 2006
FriOI	GRGCYC	2 cut(s)	462, 1539
GlaI	GCGC	9 cut(s)	125, 408, 428, 514, 822, 824, 1229, 1668, 2301
GsuI	CTGGAG	1 cut(s)	780
HaeII	RGCGCY	2 cut(s)	516, 1670
HapII	CCGG	9 cut(s)	194, 282, 410, 656, 1878, 2097, 2137, 2158, 2287
HgaI	GACGC	3 cut(s)	300, 345, 2022
HhaI	GCGC	9 cut(s)	126, 409, 429, 515, 823, 825, 1230, 1669, 2302
Hin1II	CATG	5 cut(s)	668, 836, 1094, 1174, 1727
Hin6I	GCGC	9 cut(s)	124, 407, 427, 513, 821, 823, 1228, 1667, 2300
HinP1I	GCGC	9 cut(s)	124, 407, 427, 513, 821, 823, 1228, 1667, 2300
HincII	GTYRAC	2 cut(s)	1284, 2037
HindII	GTYRAC	2 cut(s)	1284, 2037
HindIII	AAGCTT	1 cut(s)	1190
HpaII	CCGG	9 cut(s)	194, 282, 410, 656, 1878, 2097, 2137, 2158, 2287
HphI	GGTGA	6 cut(s)	458, 491, 712, 1241, 1710, 2202
Hpy166II	GTNNAC	7 cut(s)	640, 729, 917, 1097, 1265, 1284, 2037
Hpy188III	TCNNGA	7 cut(s)	590, 656, 797, 1098, 1623, 1745, 2202
Hpy8I	GTNNAC	7 cut(s)	640, 729, 917, 1097, 1265, 1284, 2037
Hpy99I	CGWCG	7 cut(s)	204, 233, 254, 272, 275, 294, 346
HpyCH4III	ACNGT	5 cut(s)	620, 700, 744, 1774, 1996
HpyCH4IV	ACGT	3 cut(s)	273, 614, 2250
HpyCH4V	TGCA	9 cut(s)	97, 779, 784, 1349, 1373, 1406, 1553, 1571, 2320
HpyF3I	CTNAG	7 cut(s)	74, 471, 985, 1031, 1333, 1593, 1923
HpySE526I	ACGT	3 cut(s)	273, 614, 2250
Hsp92II	CATG	5 cut(s)	668, 836, 1094, 1174, 1727
HspAI	GCGC	9 cut(s)	124, 407, 427, 513, 821, 823, 1228, 1667, 2300
Kpn2I	TCCGGA	1 cut(s)	655
Kzo9I	GATC	9 cut(s)	55, 203, 441, 452, 1027, 1781, 1851, 1881, 2242
LmnI	GCTCC	9 cut(s)	88, 196, 380, 776, 799, 830, 964, 1353, 1898
LweI	GCATC	2 cut(s)	688, 979
MaeII	ACGT	3 cut(s)	273, 614, 2250
MaeIII	GTNAC	2 cut(s)	2178, 2208
MalI	GATC	9 cut(s)	57, 205, 443, 454, 1029, 1783, 1853, 1883, 2244
MboI	GATC	9 cut(s)	55, 203, 441, 452, 1027, 1781, 1851, 1881, 2242
MflI	RGATCY	4 cut(s)	55, 452, 1851, 2242
MhlI	GDGCHC	2 cut(s)	462, 1539
MlsI	TGGCCA	1 cut(s)	1949
MluNI	TGGCCA	1 cut(s)	1949
MlyI	GAGTC	5 cut(s)	64, 173, 389, 1280, 1496
MmeI	TCCRAC	7 cut(s)	174, 408, 516, 1441, 1897, 1921, 2047
Mox20I	TGGCCA	1 cut(s)	1949
MroI	TCCGGA	1 cut(s)	655
MscI	TGGCCA	1 cut(s)	1949
MseI	TTAA	6 cut(s)	764, 1440, 1803, 1893, 1965, 2045
Msp20I	TGGCCA	1 cut(s)	1949
MspA1I	CMGCKG	2 cut(s)	94, 1259
MspI	CCGG	9 cut(s)	194, 282, 410, 656, 1878, 2097, 2137, 2158, 2287
MvaI	CCWGG	6 cut(s)	891, 1434, 1452, 1951, 1956, 2268
MvnI	CGCG	3 cut(s)	294, 356, 823
NciI	CCSGG	5 cut(s)	283, 1878, 1879, 2137, 2158
NcoI	CCATGG	1 cut(s)	1090
NdeI	CATATG	1 cut(s)	1903
NdeII	GATC	9 cut(s)	55, 203, 441, 452, 1027, 1781, 1851, 1881, 2242
NheI	GCTAGC	1 cut(s)	838
NlaIII	CATG	5 cut(s)	668, 836, 1094, 1174, 1727
NlaIV	GGNNCC	6 cut(s)	192, 376, 642, 895, 1168, 1355
NmuCI	GTSAC	2 cut(s)	2178, 2208
NspV	TTCGAA	1 cut(s)	1187
PasI	CCCWGGG	1 cut(s)	1451
PauI	GCGCGC	1 cut(s)	821
PceI	AGGCCT	3 cut(s)	955, 1690, 1954
PcsI	WCGNNNNNNNCGW	1 cut(s)	393
PfeI	GAWTC	7 cut(s)	539, 1073, 1086, 2149, 2198, 2228, 2294
Pfl23II	CGTACG	1 cut(s)	615
Ple19I	CGATCG	1 cut(s)	444
PleI	GAGTC	5 cut(s)	64, 173, 388, 1279, 1496
PpsI	GAGTC	5 cut(s)	64, 173, 388, 1279, 1496
Ppu21I	YACGTR	1 cut(s)	615
PpuMI	RGGWCCY	2 cut(s)	893, 1040
PshAI	GACNNNNGTC	1 cut(s)	1270
Psp124BI	GAGCTC	1 cut(s)	1539
Psp5II	RGGWCCY	2 cut(s)	893, 1040
Psp6I	CCWGG	6 cut(s)	889, 1432, 1450, 1949, 1954, 2266
PspGI	CCWGG	6 cut(s)	889, 1432, 1450, 1949, 1954, 2266
PspLI	CGTACG	1 cut(s)	615
PspN4I	GGNNCC	6 cut(s)	192, 376, 642, 895, 1168, 1355
PspPI	GGNCC	6 cut(s)	42, 640, 893, 1040, 1382, 1448
PspPPI	RGGWCCY	2 cut(s)	893, 1040
PstI	CTGCAG	1 cut(s)	99
PstNI	CAGNNNCTG	1 cut(s)	1772
PsuI	RGATCY	4 cut(s)	55, 452, 1851, 2242
PteI	GCGCGC	1 cut(s)	821
PvuI	CGATCG	1 cut(s)	444
PvuII	CAGCTG	2 cut(s)	94, 1259
RsaI	GTAC	4 cut(s)	617, 788, 1795, 2083
RsaNI	GTAC	4 cut(s)	616, 787, 1794, 2082
SacI	GAGCTC	1 cut(s)	1539
SaqAI	TTAA	6 cut(s)	764, 1440, 1803, 1893, 1965, 2045
Sau3AI	GATC	9 cut(s)	55, 203, 441, 452, 1027, 1781, 1851, 1881, 2242
Sau96I	GGNCC	6 cut(s)	42, 640, 893, 1040, 1382, 1448
SchI	GAGTC	5 cut(s)	64, 173, 389, 1280, 1496
SduI	GDGCHC	2 cut(s)	462, 1539
SfaNI	GCATC	2 cut(s)	688, 979
SfcI	CTRYAG	2 cut(s)	95, 1320
SfuI	TTCGAA	1 cut(s)	1187
SinI	GGWCC	4 cut(s)	640, 893, 1040, 1382
SmaI	CCCGGG	1 cut(s)	1879
SmlI	CTYRAG	1 cut(s)	305
SmoI	CTYRAG	1 cut(s)	305
SpeI	ACTAGT	2 cut(s)	716, 1118
SseBI	AGGCCT	3 cut(s)	955, 1690, 1954
SsiI	CCGC	7 cut(s)	183, 211, 214, 354, 372, 1177, 1731
SspI	AATATT	1 cut(s)	1378
SstI	GAGCTC	1 cut(s)	1539
StuI	AGGCCT	3 cut(s)	955, 1690, 1954
StyI	CCWWGG	5 cut(s)	186, 520, 897, 960, 1090
TaaI	ACNGT	5 cut(s)	620, 700, 744, 1774, 1996
TaiI	ACGT	3 cut(s)	276, 617, 2253
TaqI	TCGA	5 cut(s)	202, 417, 591, 1187, 1784
TatI	WGTACW	1 cut(s)	786
TauI	GCSGC	3 cut(s)	216, 375, 1733
TfiI	GAWTC	7 cut(s)	539, 1073, 1086, 2149, 2198, 2228, 2294
Tru1I	TTAA	6 cut(s)	764, 1440, 1803, 1893, 1965, 2045
Tru9I	TTAA	6 cut(s)	764, 1440, 1803, 1893, 1965, 2045
TscAI	CASTG	6 cut(s)	642, 951, 1284, 1497, 1762, 2133
TseFI	GTSAC	2 cut(s)	2178, 2208
Tsp45I	GTSAC	2 cut(s)	2178, 2208
TspDTI	ATGAA	6 cut(s)	681, 1065, 1518, 1548, 2008, 2091
TspGWI	ACGGA	2 cut(s)	82, 1538
TspMI	CCCGGG	1 cut(s)	1877
TspRI	CASTG	6 cut(s)	642, 951, 1284, 1497, 1762, 2133
VpaK11BI	GGWCC	4 cut(s)	640, 893, 1040, 1382
XapI	RAATTY	8 cut(s)	850, 931, 1139, 1555, 1861, 2047, 2074, 2110
XmaI	CCCGGG	1 cut(s)	1877
XmiI	GTMKAC	2 cut(s)	728, 916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.