Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013612

Physical Location & Seq

Genomic Coordinates Reverse (-)

44241870 .. 44247655

Gene Structure 5786 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25185

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGGTAAGGTAGTGGAGACGAAGAAGAAGAAGAAGAAAGGACGCCCCTCTCTTTTAGATCTCCAAAAACGGAATATCAGAGAGCAACAGCATCACCTCCACCGCACCTCCAACAATTCCAATTCCACTTCTGCCCCTCGTTCCAACCCTATTTACACCCCTACTGCCCCTCCCACCACCACCGCCACCGCCACCGCCAACCACAACCAGCCTCCGCTCCGTCGATCCACCCGCCGCAACCCCAACCCCGACGACGACGAGGATGACGACGACGACTCCGACGGAAACGGCGGCGTTTCGGACGGGAAGCGCCGCGAGAAGAAACTCAAGCTGGTCCTCAAATTGCCGAAATCGTCCGCGAATTCGGCGTCGGTGAATTCCGGCGGGTCGGAGAATGACGACGACGACAACGCCGCGTCGGAGAGCGGCAAAAAGCGGAAGATCAATGCTATAGGGGATGGATCTGGGCTCGCTCACCCGCCAAAGGGCGACAAGTCGATTCCTGCTACAAACCCCTCCTCAAGCACCCACCAAGGTGGGGCAAAGTTGGATTCTGGACCCTCTACTCCTTTACCCAATACAAAGCTGCTACTTTTCGTTCTTGAGCGGCTTCAAAAGAAGGACGCCTATGGGGTGTTTTCTGAACCTGTGGACCCGGAAGAGCTTCCAGACTACCATGAAGTAATAGAGAACCCTATGGATTTTGGGACAGTGAAGAAGAAACTTACAAGTGGAGCGTATGCCAGCTTGGAGCAGTTTGAGGATGACATTTTCTTAATTTGCTCGAATGCAATGCAGTACAATGCCCCAGATACTATATATTTTCGACAGGCGCGCTCCATCCATGAGCTTGCGAAAAAGAACTTTGAAAATTTGAGGCAAGATAGTGATGATAATGAACCAGAACCCAAGGTCGTAAGAAGGGGTAGACCACCGACCAAAAATCTGAAGAAACCACTTGGCAGGCCTTCCTTGGAGCGCGCTGGTTCAGAGTTCTCAGATGCCACTCTCGCTACTGGGGCAGAAAATGCCATATTGTCCAATTATGATCGTTCACGAAGTAATGATGTGTATACTAGTTGGTTGGCTGATAACAAATTTGAGAGGAATGATGACTTAACAGGTTCCATGTTGAGAGGTAATTCCAAGACTGGGAGAAAGCAGTTTGTATTTGATGAGAACAGGCGTAATACATATCTACACTCTCATCCCTCAGCTAATGGACGAGAGTCAACCGTGTTGACTACATTTGATGGAGAAAGAAAACAGCTAATGCCTGTAGGGCTTCAGTCAGATGGTTATGCAAGGAGCCTGGCTCGATTTGCAGCGAATCTTGGACCTGTTGCTTGGAGAATTGCTGCACAAAGGATCCAAAGGTCTTTGCCTGCTGGTGTTAAGTTCGGCCCTGGGTGGGTTGGTGAAAATGATGTTGCTCCTCATAGGCCACTGGTATTAGCCTCATCCTCAAAAGAGCAGCCATCTTCACCACAGCCCTTGCCCTTTCGTGCAAACTCGTCTTCTGCTACAATATCTTGCTCTATTGAACCAAATAAAGATAAATTATCAGACAAACCTTCAGGTCATAACTTGTCAGAGAAACATGCCCCTTCTATTTCTTCAGGGCCGGATGACCATCCAAGCAGTCCTCCCCCACTGTCTGCTGCCACCTCATCAGATCCCTTAGTTGCTAACAGATCTCCTGAATCCCGCACAGGAAAAGGAGAAACTGTTGAAGGATCAAACTCTCGTGGTGGGATTAATATGATGAACAGTAATCTTGGTGGAATCAGGCCAAGGCCTCCTTTTCAGATCCATCGGACTCCTGAAATACAACCTGGGGTGAATGGATTGAATGGGACATATGGATTAAACCGTCCTGCTCAGGTAGGGAAACAAGTTGGCGTGACCAGGCCTGGTGGCTTCAGCTTCCAATCATCTCAAATGCTTGACCAAGTCTCCAGGACTAATACTAACCTGACTCATCCAGCGACTTCAAACAGCTTAAATTCAGAAGAAACCAAGCCCTCTGACGATCCAGGTACAAAGCAGTCTTCTGGTTCATATTCAAATTCAGTGAAAAATGAGTCATTGCCAGCCCGAACATCGGGGCTTCATCCCCGGTCATCTTGGCGAGGGTCATCCCAACAGATTAAACCTAATCCAGGATTCTCTCCGCAACAGAAGCCTGACTCAGTTCCACCAGATCTGAACGTCAGATTTCAGTCACCAGGGTCCCCTAGTTCTAGCCGGGCTGATTCAACGCAGCCGGATTTAGCATTGCAGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

762

Amino Acids

82.56

Weight (kDa)

9.37

Isoelectric Point (pI)

55.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	198 - 279	4e-25	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013612)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16690
malus_domestica	MD05G1135100.v1.1 MD10G1140600.v1.1
prunus_persica	Prupe.8G179000_v2.0.a1
pyrus_communis	pycom05g13170 pycom10g11920
rosa_chinensis	RchiOBHm_Chr6g0280831
rosa_laevigata	RLG00000013027
rosa_multiflora	Rmu_co8368811.1_g000001 Rmu_sc0003153.1_g000023 Rmu_sc0038972.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187590
rosa_rugosa	Rorug06G0134800
rosa_samantha	Rh6AG248200 Rh6BG249700 Rh6CG250900 Rh6DG242500
rosa_wichuraiana	Rw6G021450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	3 cut(s)	217, 426, 607
AccI	GTMKAC	2 cut(s)	928, 1073
AccII	CGCG	5 cut(s)	315, 359, 416, 835, 981
AclWI	GGATC	8 cut(s)	219, 469, 1363, 1376, 1670, 1744, 1804, 2027
AcsI	RAATTY	6 cut(s)	361, 376, 871, 1097, 2005, 2068
AcuI	CTGAAG	5 cut(s)	968, 1271, 1560, 1602, 1906
AcyI	GRCGYC	3 cut(s)	43, 368, 624
AfaI	GTAC	2 cut(s)	800, 2041
AfiI	CCNNNNNNNGG	7 cut(s)	484, 485, 538, 1152, 1411, 2104, 2162
AgsI	TTSAA	8 cut(s)	614, 869, 1544, 1733, 1852, 1995, 2067, 2259
AhlI	ACTAGT	1 cut(s)	1076
AjnI	CCWGG	9 cut(s)	1311, 1405, 1834, 1907, 1912, 1958, 2035, 2161, 2227
AleI	CACNNNNGTG	1 cut(s)	534
Alw26I	GTCTC	2 cut(s)	11, 1960
AlwI	GGATC	8 cut(s)	219, 469, 1363, 1376, 1670, 1744, 1804, 2027
AoxI	GGCC	7 cut(s)	965, 1402, 1442, 1622, 1790, 1796, 1910
ApeKI	GCWGC	7 cut(s)	586, 1325, 1358, 1474, 1661, 2263, 2281
ApoI	RAATTY	6 cut(s)	361, 376, 871, 1097, 2005, 2068
ArsI	GACNNNNNNTTYG	2 cut(s)	353, 385
AseI	ATTAAT	1 cut(s)	1758
Asp700I	GAANNNNTTC	1 cut(s)	663
AspLEI	GCGC	5 cut(s)	312, 835, 837, 981, 983
AspS9I	GGNCC	7 cut(s)	334, 557, 652, 1337, 1403, 1622, 2232
AsuC2I	CCSGG	3 cut(s)	656, 2119, 2249
AsuHPI	GGTGA	7 cut(s)	86, 385, 467, 1430, 1476, 1852, 2217
AvaII	GGWCC	5 cut(s)	334, 557, 652, 1337, 2232
BamHI	GGATCC	1 cut(s)	1368
BanII	GRGCYC	1 cut(s)	471
BauI	CACGAG	1 cut(s)	1746
BbsI	GAAGAC	2 cut(s)	1509, 2043
BbvCI	CCTCAGC	1 cut(s)	1213
BbvI	GCAGC	6 cut(s)	573, 1337, 1345, 1486, 1648, 2275
BccI	CCATC	7 cut(s)	452, 848, 1247, 1289, 1486, 1641, 1821
BceAI	ACGGC	1 cut(s)	304
BcgI	CGANNNNNNTGC	2 cut(s)	775, 809
BciT130I	CCWGG	9 cut(s)	1313, 1407, 1836, 1909, 1914, 1960, 2037, 2163, 2229
BcnI	CCSGG	3 cut(s)	656, 2119, 2249
BcoDI	GTCTC	2 cut(s)	11, 1960
BcuI	ACTAGT	1 cut(s)	1076
BfaI	CTAG	3 cut(s)	1077, 2238, 2244
BfmI	CTRYAG	2 cut(s)	450, 1278
BfoI	RGCGCY	1 cut(s)	313
BglI	GCCNNNNNGGC	1 cut(s)	1282
BglII	AGATCT	3 cut(s)	58, 1694, 2203
Bme18I	GGWCC	5 cut(s)	334, 557, 652, 1337, 2232
BmgT120I	GGNCC	7 cut(s)	334, 557, 652, 1337, 1403, 1622, 2232
BmiI	GGNNCC	7 cut(s)	559, 654, 1126, 1310, 1370, 2233, 2234
BmrI	ACTGGG	2 cut(s)	1026, 1161
BmsI	GCATC	2 cut(s)	100, 991
BmuI	ACTGGG	2 cut(s)	1026, 1161
BoxI	GACNNNNGTC	1 cut(s)	1228
BpiI	GAAGAC	2 cut(s)	1509, 2043
BplI	GAGNNNNNCTC	2 cut(s)	1300, 1332
BpmI	CTGGAG	1 cut(s)	1942
Bpu10I	CCTNAGC	2 cut(s)	1213, 1881
BpuEI	CTTGAG	3 cut(s)	311, 505, 623
BpuMI	CCSGG	3 cut(s)	656, 2119, 2249
BsaBI	GATNNNNATC	1 cut(s)	1632
BsaHI	GRCGYC	3 cut(s)	43, 368, 624
BsaJI	CCNNGG	9 cut(s)	532, 909, 972, 1405, 1406, 1793, 1835, 2117, 2228
Bsc4I	CCNNNNNNNGG	7 cut(s)	484, 485, 538, 1152, 1411, 2104, 2162
Bse1I	ACTGG	3 cut(s)	1021, 1156, 1452
Bse3DI	GCAATG	3 cut(s)	798, 2087, 2276
Bse8I	GATNNNNATC	1 cut(s)	1632
BseBI	CCWGG	9 cut(s)	1313, 1407, 1836, 1909, 1914, 1960, 2037, 2163, 2229
BseDI	CCNNGG	9 cut(s)	532, 909, 972, 1405, 1406, 1793, 1835, 2117, 2228
BseJI	GATNNNNATC	1 cut(s)	1632
BseLI	CCNNNNNNNGG	7 cut(s)	484, 485, 538, 1152, 1411, 2104, 2162
BseMI	GCAATG	3 cut(s)	798, 2087, 2276
BseMII	CTCAG	4 cut(s)	1011, 1227, 1895, 2205
BseNI	ACTGG	3 cut(s)	1021, 1156, 1452
BsePI	GCGCGC	2 cut(s)	833, 979
BseRI	GAGGAG	2 cut(s)	508, 1425
BseXI	GCAGC	6 cut(s)	573, 1337, 1345, 1486, 1648, 2275
BsgI	GTGCAG	1 cut(s)	1344
Bsh1236I	CGCG	5 cut(s)	315, 359, 416, 835, 981
BshFI	GGCC	7 cut(s)	967, 1404, 1444, 1624, 1792, 1798, 1912
BsiSI	CCGG	6 cut(s)	381, 656, 1625, 2119, 2248, 2267
BslFI	GGGAC	3 cut(s)	721, 1870, 2218
BslI	CCNNNNNNNGG	7 cut(s)	484, 485, 538, 1152, 1411, 2104, 2162
BsmAI	GTCTC	2 cut(s)	11, 1960
BsmBI	CGTCTC	1 cut(s)	11
BsmFI	GGGAC	3 cut(s)	721, 1870, 2218
BsmI	GAATGC	1 cut(s)	793
BsnI	GGCC	7 cut(s)	967, 1404, 1444, 1624, 1792, 1798, 1912
Bsp1286I	GDGCHC	1 cut(s)	471
BspANI	GGCC	7 cut(s)	967, 1404, 1444, 1624, 1792, 1798, 1912
BspCNI	CTCAG	4 cut(s)	1010, 1226, 1894, 2204
BspFNI	CGCG	5 cut(s)	315, 359, 416, 835, 981
BspLI	GGNNCC	7 cut(s)	559, 654, 1126, 1310, 1370, 2233, 2234
BspPI	GGATC	8 cut(s)	219, 469, 1363, 1376, 1670, 1744, 1804, 2027
BspQI	GCTCTTC	1 cut(s)	654
BsrBI	CCGCTC	3 cut(s)	217, 426, 607
BsrDI	GCAATG	3 cut(s)	798, 2087, 2276
BsrI	ACTGG	3 cut(s)	1021, 1156, 1452
BssECI	CCNNGG	9 cut(s)	532, 909, 972, 1405, 1406, 1793, 1835, 2117, 2228
BssHII	GCGCGC	2 cut(s)	833, 979
BssNAI	GTATAC	1 cut(s)	1074
BssNI	GRCGYC	3 cut(s)	43, 368, 624
BssSI	CACGAG	1 cut(s)	1746
BssT1I	CCWWGG	4 cut(s)	532, 909, 972, 1793
Bst1107I	GTATAC	1 cut(s)	1074
Bst2BI	CACGAG	1 cut(s)	1746
Bst2UI	CCWGG	9 cut(s)	1313, 1407, 1836, 1909, 1914, 1960, 2037, 2163, 2229
Bst4CI	ACNGT	6 cut(s)	712, 1237, 1656, 1729, 1772, 1874
Bst6I	CTCTTC	1 cut(s)	654
BstACI	GRCGYC	3 cut(s)	43, 368, 624
BstAPI	GCANNNNNTGC	1 cut(s)	1028
BstC8I	GCNNGC	8 cut(s)	471, 745, 835, 852, 965, 981, 1386, 2094
BstDEI	CTNAG	5 cut(s)	997, 1213, 1681, 1881, 2191
BstENI	CCTNNNNNAGG	1 cut(s)	2160
BstFNI	CGCG	5 cut(s)	315, 359, 416, 835, 981
BstH2I	RGCGCY	1 cut(s)	313
BstHHI	GCGC	5 cut(s)	312, 835, 837, 981, 983
BstMAI	GTCTC	2 cut(s)	11, 1960
BstMWI	GCNNNNNNNGC	7 cut(s)	365, 1010, 1019, 1028, 1282, 1322, 2182
BstNI	CCWGG	9 cut(s)	1313, 1407, 1836, 1909, 1914, 1960, 2037, 2163, 2229
BstNSI	RCATGY	1 cut(s)	1604
BstPAI	GACNNNNGTC	1 cut(s)	1228
BstSFI	CTRYAG	2 cut(s)	450, 1278
BstUI	CGCG	5 cut(s)	315, 359, 416, 835, 981
BstV1I	GCAGC	6 cut(s)	573, 1337, 1345, 1486, 1648, 2275
BstV2I	GAAGAC	2 cut(s)	1509, 2043
BstX2I	RGATCY	7 cut(s)	58, 461, 1368, 1675, 1694, 1809, 2203
BstXI	CCANNNNNNTGG	1 cut(s)	536
BstYI	RGATCY	7 cut(s)	58, 461, 1368, 1675, 1694, 1809, 2203
BstZ17I	GTATAC	1 cut(s)	1074
BsuRI	GGCC	7 cut(s)	967, 1404, 1444, 1624, 1792, 1798, 1912
BtsIMutI	CAGTG	4 cut(s)	717, 1445, 1652, 2079
Cac8I	GCNNGC	8 cut(s)	471, 745, 835, 852, 965, 981, 1386, 2094
CfoI	GCGC	5 cut(s)	312, 835, 837, 981, 983
Cfr13I	GGNCC	7 cut(s)	334, 557, 652, 1337, 1403, 1622, 2232
CseI	GACGC	4 cut(s)	51, 357, 405, 632
Csp6I	GTAC	2 cut(s)	799, 2040
CspCI	CAANNNNNGTGG	2 cut(s)	1476, 1511
CviAII	CATG	4 cut(s)	677, 845, 1129, 1601
CviQI	GTAC	2 cut(s)	799, 2040
DdeI	CTNAG	5 cut(s)	997, 1213, 1681, 1881, 2191
Eam1104I	CTCTTC	1 cut(s)	654
EarI	CTCTTC	1 cut(s)	654
Eco130I	CCWWGG	4 cut(s)	532, 909, 972, 1793
Eco147I	AGGCCT	3 cut(s)	967, 1798, 1912
Eco24I	GRGCYC	1 cut(s)	471
Eco47I	GGWCC	5 cut(s)	334, 557, 652, 1337, 2232
Eco57I	CTGAAG	5 cut(s)	968, 1271, 1560, 1602, 1906
EcoNI	CCTNNNNNAGG	1 cut(s)	2160
EcoO109I	RGGNCCY	1 cut(s)	2232
EcoRI	GAATTC	2 cut(s)	361, 376
EcoRII	CCWGG	9 cut(s)	1311, 1405, 1834, 1907, 1912, 1958, 2035, 2161, 2227
EcoT14I	CCWWGG	4 cut(s)	532, 909, 972, 1793
EcoT38I	GRGCYC	1 cut(s)	471
ErhI	CCWWGG	4 cut(s)	532, 909, 972, 1793
Esp3I	CGTCTC	1 cut(s)	11
FaeI	CATG	4 cut(s)	680, 848, 1132, 1604
FalI	AAGNNNNNCTT	2 cut(s)	1786, 1818
FaqI	GGGAC	3 cut(s)	721, 1870, 2218
FatI	CATG	4 cut(s)	676, 844, 1128, 1600
FauI	CCCGC	4 cut(s)	239, 377, 486, 1715
FauNDI	CATATG	1 cut(s)	1861
FblI	GTMKAC	2 cut(s)	928, 1073
FriOI	GRGCYC	1 cut(s)	471
FspBI	CTAG	3 cut(s)	1077, 2238, 2244
GlaI	GCGC	5 cut(s)	311, 834, 836, 980, 982
GsuI	CTGGAG	1 cut(s)	1942
HaeII	RGCGCY	1 cut(s)	313
HaeIII	GGCC	7 cut(s)	967, 1404, 1444, 1624, 1792, 1798, 1912
HapII	CCGG	6 cut(s)	381, 656, 1625, 2119, 2248, 2267
HgaI	GACGC	4 cut(s)	51, 357, 405, 632
HhaI	GCGC	5 cut(s)	312, 835, 837, 981, 983
Hin1I	GRCGYC	3 cut(s)	43, 368, 624
Hin1II	CATG	4 cut(s)	680, 848, 1132, 1604
Hin6I	GCGC	5 cut(s)	310, 833, 835, 979, 981
HinP1I	GCGC	5 cut(s)	310, 833, 835, 979, 981
HincII	GTYRAC	2 cut(s)	1233, 1242
HindII	GTYRAC	2 cut(s)	1233, 1242
HpaII	CCGG	6 cut(s)	381, 656, 1625, 2119, 2248, 2267
HphI	GGTGA	7 cut(s)	86, 385, 467, 1430, 1476, 1852, 2217
Hpy166II	GTNNAC	6 cut(s)	652, 929, 1055, 1074, 1233, 1242
Hpy188III	TCNNGA	6 cut(s)	555, 602, 668, 1056, 1700, 1823
Hpy8I	GTNNAC	6 cut(s)	652, 929, 1055, 1074, 1233, 1242
HpyAV	CCTTC	6 cut(s)	613, 915, 978, 1584, 1617, 1727
HpyCH4III	ACNGT	6 cut(s)	712, 1237, 1656, 1729, 1772, 1874
HpyCH4IV	ACGT	1 cut(s)	2211
HpyCH4V	TGCA	7 cut(s)	791, 796, 1304, 1325, 1361, 1508, 2281
HpyF10VI	GCNNNNNNNGC	7 cut(s)	365, 1010, 1019, 1028, 1282, 1322, 2182
HpyF3I	CTNAG	5 cut(s)	997, 1213, 1681, 1881, 2191
HpySE526I	ACGT	1 cut(s)	2211
Hsp92I	GRCGYC	3 cut(s)	43, 368, 624
Hsp92II	CATG	4 cut(s)	680, 848, 1132, 1604
HspAI	GCGC	5 cut(s)	310, 833, 835, 979, 981
KflI	GGGWCCC	1 cut(s)	2232
LguI	GCTCTTC	1 cut(s)	654
LmnI	GCTCC	7 cut(s)	222, 734, 751, 842, 976, 1308, 1438
Lsp1109I	GCAGC	6 cut(s)	573, 1337, 1345, 1486, 1648, 2275
LweI	GCATC	2 cut(s)	100, 991
MaeI	CTAG	3 cut(s)	1077, 2238, 2244
MaeII	ACGT	1 cut(s)	2211
MaeIII	GTNAC	2 cut(s)	1903, 2223
MbiI	CCGCTC	3 cut(s)	217, 426, 607
MflI	RGATCY	7 cut(s)	58, 461, 1368, 1675, 1694, 1809, 2203
MhlI	GDGCHC	1 cut(s)	471
MlyI	GAGTC	6 cut(s)	269, 1238, 1813, 1972, 2093, 2183
MmeI	TCCRAC	6 cut(s)	135, 168, 303, 369, 399, 528
MroXI	GAANNNNTTC	1 cut(s)	663
MseI	TTAA	7 cut(s)	776, 1118, 1395, 1758, 1868, 2003, 2151
MslI	CAYNNNNRTG	1 cut(s)	534
MspI	CCGG	6 cut(s)	381, 656, 1625, 2119, 2248, 2267
Mva1269I	GAATGC	1 cut(s)	793
MvaI	CCWGG	9 cut(s)	1313, 1407, 1836, 1909, 1914, 1960, 2037, 2163, 2229
MvnI	CGCG	5 cut(s)	315, 359, 416, 835, 981
MwoI	GCNNNNNNNGC	7 cut(s)	365, 1010, 1019, 1028, 1282, 1322, 2182
NciI	CCSGG	3 cut(s)	656, 2119, 2249
NdeI	CATATG	1 cut(s)	1861
NlaIII	CATG	4 cut(s)	680, 848, 1132, 1604
NlaIV	GGNNCC	7 cut(s)	559, 654, 1126, 1310, 1370, 2233, 2234
NmuCI	GTSAC	2 cut(s)	1903, 2223
NspI	RCATGY	1 cut(s)	1604
OliI	CACNNNNGTG	1 cut(s)	534
PasI	CCCWGGG	1 cut(s)	1406
PauI	GCGCGC	2 cut(s)	833, 979
PceI	AGGCCT	3 cut(s)	967, 1798, 1912
PciSI	GCTCTTC	1 cut(s)	654
PcsI	WCGNNNNNNNCGW	2 cut(s)	264, 276
PctI	GAATGC	1 cut(s)	793
PdmI	GAANNNNTTC	1 cut(s)	663
PfeI	GAWTC	7 cut(s)	499, 551, 1330, 1703, 1785, 2166, 2255
PflFI	GACNNNGTC	1 cut(s)	1952
PfoI	TCCNGGA	2 cut(s)	1958, 2161
PleI	GAGTC	6 cut(s)	269, 1237, 1813, 1972, 2092, 2183
PpsI	GAGTC	6 cut(s)	269, 1237, 1813, 1972, 2092, 2183
PpuMI	RGGWCCY	1 cut(s)	2232
PshAI	GACNNNNGTC	1 cut(s)	1228
PshBI	ATTAAT	1 cut(s)	1758
Psp5II	RGGWCCY	1 cut(s)	2232
Psp6I	CCWGG	9 cut(s)	1311, 1405, 1834, 1907, 1912, 1958, 2035, 2161, 2227
PspGI	CCWGG	9 cut(s)	1311, 1405, 1834, 1907, 1912, 1958, 2035, 2161, 2227
PspN4I	GGNNCC	7 cut(s)	559, 654, 1126, 1310, 1370, 2233, 2234
PspPI	GGNCC	7 cut(s)	334, 557, 652, 1337, 1403, 1622, 2232
PspPPI	RGGWCCY	1 cut(s)	2232
PsuI	RGATCY	7 cut(s)	58, 461, 1368, 1675, 1694, 1809, 2203
PsyI	GACNNNGTC	1 cut(s)	1952
PteI	GCGCGC	2 cut(s)	833, 979
RsaI	GTAC	2 cut(s)	800, 2041
RsaNI	GTAC	2 cut(s)	799, 2040
RseI	CAYNNNNRTG	1 cut(s)	534
SapI	GCTCTTC	1 cut(s)	654
SaqAI	TTAA	7 cut(s)	776, 1118, 1395, 1758, 1868, 2003, 2151
Sau96I	GGNCC	7 cut(s)	334, 557, 652, 1337, 1403, 1622, 2232
SchI	GAGTC	6 cut(s)	269, 1238, 1813, 1972, 2093, 2183
SduI	GDGCHC	1 cut(s)	471
SfaNI	GCATC	2 cut(s)	100, 991
SfcI	CTRYAG	2 cut(s)	450, 1278
SinI	GGWCC	5 cut(s)	334, 557, 652, 1337, 2232
SmiMI	CAYNNNNRTG	1 cut(s)	534
SmlI	CTYRAG	3 cut(s)	326, 520, 602
SmoI	CTYRAG	3 cut(s)	326, 520, 602
SpeI	ACTAGT	1 cut(s)	1076
SseBI	AGGCCT	3 cut(s)	967, 1798, 1912
SspMI	CTAG	3 cut(s)	1077, 2238, 2244
StuI	AGGCCT	3 cut(s)	967, 1798, 1912
StyI	CCWWGG	4 cut(s)	532, 909, 972, 1793
TaaI	ACNGT	6 cut(s)	712, 1237, 1656, 1729, 1772, 1874
TaiI	ACGT	1 cut(s)	2214
TaqI	TCGA	5 cut(s)	223, 497, 785, 826, 1318
TatI	WGTACW	1 cut(s)	798
TauI	GCSGC	6 cut(s)	237, 294, 315, 416, 429, 610
TfiI	GAWTC	7 cut(s)	499, 551, 1330, 1703, 1785, 2166, 2255
Tru1I	TTAA	7 cut(s)	776, 1118, 1395, 1758, 1868, 2003, 2151
Tru9I	TTAA	7 cut(s)	776, 1118, 1395, 1758, 1868, 2003, 2151
TscAI	CASTG	4 cut(s)	717, 1452, 1659, 2079
TseFI	GTSAC	2 cut(s)	1903, 2223
TseI	GCWGC	7 cut(s)	586, 1325, 1358, 1474, 1661, 2263, 2281
Tsp45I	GTSAC	2 cut(s)	1903, 2223
TspDTI	ATGAA	5 cut(s)	693, 912, 1781, 2049, 2102
TspGWI	ACGGA	3 cut(s)	85, 209, 297
TspRI	CASTG	4 cut(s)	717, 1452, 1659, 2079
Tth111I	GACNNNGTC	1 cut(s)	1952
VpaK11BI	GGWCC	5 cut(s)	334, 557, 652, 1337, 2232
VspI	ATTAAT	1 cut(s)	1758
XagI	CCTNNNNNAGG	1 cut(s)	2160
XapI	RAATTY	6 cut(s)	361, 376, 871, 1097, 2005, 2068
XceI	RCATGY	1 cut(s)	1604
XmiI	GTMKAC	2 cut(s)	928, 1073
XmnI	GAANNNNTTC	1 cut(s)	663
XspI	CTAG	3 cut(s)	1077, 2238, 2244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.