Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0013612

Physical Location & Seq

Genomic Coordinates Forward (+)

26985265 .. 26990772

Gene Structure 5508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00187590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGGGTAAGGTAGTGGAGACGAAGAAGAAGAAGAAGAAAGGACGCCCCTCTCTTTTAGATCTCCAAAAACGGAATATCAGGGAGCAACAACACCACCTCCACCGCACCTCCAACAATTCCAATTCCACTTCTGCCCCTCGTTCCAACCCTATTTACACCCCTACTACTGCCCCTCCCACCACCACCACCACCGCCAACCACAACCACAACCAGCCTCCGCTCCGTCGATCCACCCGCCGCAACCCCAACCCCGACGACGACGAGGATGACGACGACGACTCCGACGGAAACGGCGGCGTTTCGGACGGGAAGCGCCGCGAGAAGAAACTCAAGCTGGTTCTCAAATTGCCGAAATCGTCGGCCAATTCGGCGTCGGTGAATTCCGGCGGGCCGGAGAATGACGACGATGACGACAACGCCGCGTCGGAGAGCGGCAAAAAGCGCAAGATCAATGCTATAGGGGATGGATCTGGGCTCGCTCACCCGCCAAAGGGCGAGAAGTCGATTCCGGCTACAAACCCCTCCTCAAGCACCCACCAAGGTGGGGCGAAGTTGGATTCTGGACCCTCTACTCCTTTACCGAATACAAAGCTGCTACTTTTCGTTCTTGAGAGGCTTCAAAAGAAGGACACCTATGGGGTGTTTTCTGAACCTGTGGACCCAGAAGAGCTTCCAGACTACCATGAAGTAATAGACAACCCCATGGACTTTGGGACAGTGAAGAAGAAACTTACTAGTGGAGCGTATGCCAGCTTGGAGCAGTTTGAGGATGACATTTTCTTAATTTGCTCGAATGCAATGCAGTACAATGCCCCAGATACTATATATTTTCGACAGGTACTGTTAGATCCAGCTCCTTCTTTACGTAGGCAAGATAGTGATGATAATGAACCAGAACCCAAGGTTGTAAGAAGGGGTAGACCACCGACCAAAAATCTGAAGAAACCACTTGGCAGGCCTTCCTTGGAGCGCGCTGGTTCAGAGTTCTCAGATGCCACTCTCGCTACTGGGGCAGAAAATGCCATATTGTCCAATTATGATCGTTCACGAAATAATGATGTGTATACCAGTTGGTTGGCTGATAACAAATTTGAGAGGAATGATGACTTAACAGGTTCCATGTTGAGAGGTAATTCCAAGACTGGGAGAAAGCAGTTTGTATTTGATGAGAACAGGCGTAGTACATATCTACACTCTCATTCCTCAGCTAATGGACGAGAGTCAACCGTGTTGACTACATTTGATGGAGAAAGAAAACAGCTAATGCCTGTAGGGCTTCAGTCAGATGGTTATGGAAGGAGCCTGGCTCGATTTGCAGCGAATGTTGGACCTGTTGCTTGGAGAATTGCTGCAAAAAGGATCCAAAGGTCTTTGCCTGCTGGTGTTAAGTTCGGCCCTGGGTGGGTTGGTGAAAATGATGTTGCTCCTCATAGGCCACTGGTATTAGCCTCATCCTCAAAAGAGCAGCCATCTTCACCACAGCCCTTGTCCATTCGTGCAAACTTGTCTTCTGCTGCGACATATTGCTCTATTGAACCAAATAAAGATAAATTATCAGACAAACCTTCAGGTCATAACTTGTCAGCCCCTTCTATTTCTTCAGGGCCGGATGACCATCCAAGCAGTCCTCCCCCACTGTCTGCTGCCACCTCATCAGATCCCTTGGTTGCTAACAGATCTCCTGAATCCCTCACAGGAAAAGGAGAAACTGTTGAAGGATCAAACTCTCGTGGTGGGATTAATATGATGAACAGTAATCTTGGTGGAATCAGGCCAAGGCCTCCTTTTCAGATCCATCGGACTCCTGAAATACAACCTGGGGTGAATCGTTTGAATGGGACATATGGATTAAACCGTCCTGCTCAGGTAGGGAAACAAGTTGGCGTGACCAGGCCTGGTGGCTTCAGCTTCCAATCATCTCAAATGCTTGACCAAGTCTCCAGGACTAATACTAACTTGACTCATCCAGCGACTTCAAACAGCTTAAATTCAGAAGAAACCAAGCCCTCTGAAGATCCAGGTACAAAGCAGTCTTCTGGTTCATATTCAAATTCAGTGAAAAATGAGTCATTGCCAGCCCGAACATCGGGGCTTCATCCCCGGTCATCTTGGCAAGGGTCATCCCAACAGATTAAACCTAATCCAGGATTCTCTCCGCAACAGAAGCCTGACTCAGTTCCACCGGATCTGAACGTCAGATTTCAGTCGCCAGGGTCCCCTAGTTCTAGCCGGGCTGATTCAACGCAGCCGGATTTAGCATTGCAGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

756

Amino Acids

81.86

Weight (kDa)

9.28

Isoelectric Point (pI)

55.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	200 - 279	6.1e-24	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013612)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16690
malus_domestica	MD05G1135100.v1.1 MD10G1140600.v1.1
prunus_persica	Prupe.8G179000_v2.0.a1
pyrus_communis	pycom05g13170 pycom10g11920
rosa_chinensis	RchiOBHm_Chr6g0280831
rosa_laevigata	RLG00000013027
rosa_multiflora	Rmu_co8368811.1_g000001 Rmu_sc0003153.1_g000023 Rmu_sc0038972.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187590
rosa_rugosa	Rorug06G0134800
rosa_samantha	Rh6AG248200 Rh6BG249700 Rh6CG250900 Rh6DG242500
rosa_wichuraiana	Rw6G021450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	220, 432
AccI	GTMKAC	2 cut(s)	919, 1064
AccII	CGCG	3 cut(s)	318, 422, 972
AcoI	YGGCCR	1 cut(s)	360
AcsI	RAATTY	4 cut(s)	379, 1088, 1987, 2050
AcuI	CTGAAG	6 cut(s)	959, 1262, 1551, 1584, 1888, 2031
AcyI	GRCGYC	2 cut(s)	43, 371
AfaI	GTAC	4 cut(s)	806, 840, 1183, 2023
AfiI	CCNNNNNNNGG	7 cut(s)	490, 491, 544, 1143, 1402, 2086, 2144
AgsI	TTSAA	7 cut(s)	620, 1535, 1715, 1834, 1977, 2049, 2241
AhlI	ACTAGT	1 cut(s)	734
AjnI	CCWGG	9 cut(s)	1302, 1396, 1816, 1889, 1894, 1940, 2017, 2143, 2209
AleI	CACNNNNGTG	1 cut(s)	540
Alw26I	GTCTC	2 cut(s)	11, 1942
AlwNI	CAGNNNCTG	1 cut(s)	841
AoxI	GGCC	9 cut(s)	360, 389, 956, 1393, 1433, 1604, 1772, 1778, 1892
ApeKI	GCWGC	8 cut(s)	592, 1316, 1349, 1465, 1514, 1643, 2245, 2263
ApoI	RAATTY	4 cut(s)	379, 1088, 1987, 2050
AseI	ATTAAT	1 cut(s)	1740
Asp700I	GAANNNNTTC	1 cut(s)	669
AspLEI	GCGC	4 cut(s)	315, 444, 972, 974
AspS9I	GGNCC	7 cut(s)	389, 563, 658, 1328, 1394, 1604, 2214
AsuC2I	CCSGG	2 cut(s)	2101, 2231
AsuHPI	GGTGA	5 cut(s)	388, 473, 1421, 1467, 1834
AvaII	GGWCC	4 cut(s)	563, 658, 1328, 2214
BamHI	GGATCC	1 cut(s)	1359
BanII	GRGCYC	1 cut(s)	477
BauI	CACGAG	1 cut(s)	1728
BbsI	GAAGAC	2 cut(s)	1500, 2025
BbvCI	CCTCAGC	1 cut(s)	1204
BbvI	GCAGC	7 cut(s)	579, 1328, 1336, 1477, 1501, 1630, 2257
BccI	CCATC	6 cut(s)	458, 1238, 1280, 1477, 1623, 1803
BceAI	ACGGC	1 cut(s)	307
BcgI	CGANNNNNNTGC	2 cut(s)	781, 815
BciT130I	CCWGG	9 cut(s)	1304, 1398, 1818, 1891, 1896, 1942, 2019, 2145, 2211
BcnI	CCSGG	2 cut(s)	2101, 2231
BcoDI	GTCTC	2 cut(s)	11, 1942
BcuI	ACTAGT	1 cut(s)	734
BfaI	CTAG	3 cut(s)	735, 2220, 2226
BfmI	CTRYAG	2 cut(s)	456, 1269
BfoI	RGCGCY	1 cut(s)	316
BglI	GCCNNNNNGGC	2 cut(s)	368, 1273
BglII	AGATCT	2 cut(s)	58, 1676
Bme18I	GGWCC	4 cut(s)	563, 658, 1328, 2214
BmgT120I	GGNCC	7 cut(s)	389, 563, 658, 1328, 1394, 1604, 2214
BmiI	GGNNCC	7 cut(s)	565, 660, 1117, 1301, 1361, 2215, 2216
BmrI	ACTGGG	2 cut(s)	1017, 1152
BmsI	GCATC	1 cut(s)	982
BmuI	ACTGGG	2 cut(s)	1017, 1152
BoxI	GACNNNNGTC	1 cut(s)	1219
BpiI	GAAGAC	2 cut(s)	1500, 2025
BplI	GAGNNNNNCTC	2 cut(s)	1291, 1323
BpmI	CTGGAG	1 cut(s)	1924
Bpu10I	CCTNAGC	2 cut(s)	1204, 1863
BpuEI	CTTGAG	3 cut(s)	314, 511, 629
BpuMI	CCSGG	2 cut(s)	2101, 2231
BsaAI	YACGTR	1 cut(s)	866
BsaBI	GATNNNNATC	1 cut(s)	1614
BsaHI	GRCGYC	2 cut(s)	43, 371
BsaWI	WCCGGW	1 cut(s)	2182
Bsc4I	CCNNNNNNNGG	7 cut(s)	490, 491, 544, 1143, 1402, 2086, 2144
Bse1I	ACTGG	4 cut(s)	1012, 1068, 1147, 1443
Bse3DI	GCAATG	3 cut(s)	804, 2069, 2258
Bse8I	GATNNNNATC	1 cut(s)	1614
BseBI	CCWGG	9 cut(s)	1304, 1398, 1818, 1891, 1896, 1942, 2019, 2145, 2211
BseGI	GGATG	9 cut(s)	271, 469, 775, 1451, 1615, 1615, 1963, 2095, 2120
BseJI	GATNNNNATC	1 cut(s)	1614
BseLI	CCNNNNNNNGG	7 cut(s)	490, 491, 544, 1143, 1402, 2086, 2144
BseMI	GCAATG	3 cut(s)	804, 2069, 2258
BseMII	CTCAG	4 cut(s)	1002, 1218, 1877, 2187
BseNI	ACTGG	4 cut(s)	1012, 1068, 1147, 1443
BsePI	GCGCGC	1 cut(s)	970
BseRI	GAGGAG	2 cut(s)	514, 1416
BseXI	GCAGC	7 cut(s)	579, 1328, 1336, 1477, 1501, 1630, 2257
Bsh1236I	CGCG	3 cut(s)	318, 422, 972
BshFI	GGCC	9 cut(s)	362, 391, 958, 1395, 1435, 1606, 1774, 1780, 1894
BsiSI	CCGG	8 cut(s)	384, 392, 509, 1607, 2101, 2183, 2230, 2249
BslFI	GGGAC	3 cut(s)	727, 1852, 2200
BslI	CCNNNNNNNGG	7 cut(s)	490, 491, 544, 1143, 1402, 2086, 2144
BsmAI	GTCTC	2 cut(s)	11, 1942
BsmBI	CGTCTC	1 cut(s)	11
BsmFI	GGGAC	3 cut(s)	727, 1852, 2200
BsmI	GAATGC	1 cut(s)	799
BsnI	GGCC	9 cut(s)	362, 391, 958, 1395, 1435, 1606, 1774, 1780, 1894
Bsp1286I	GDGCHC	1 cut(s)	477
Bsp19I	CCATGG	1 cut(s)	702
BspANI	GGCC	9 cut(s)	362, 391, 958, 1395, 1435, 1606, 1774, 1780, 1894
BspCNI	CTCAG	4 cut(s)	1001, 1217, 1876, 2186
BspFNI	CGCG	3 cut(s)	318, 422, 972
BspLI	GGNNCC	7 cut(s)	565, 660, 1117, 1301, 1361, 2215, 2216
BspQI	GCTCTTC	1 cut(s)	660
BsrBI	CCGCTC	2 cut(s)	220, 432
BsrDI	GCAATG	3 cut(s)	804, 2069, 2258
BsrI	ACTGG	4 cut(s)	1012, 1068, 1147, 1443
BssHII	GCGCGC	1 cut(s)	970
BssNAI	GTATAC	1 cut(s)	1065
BssNI	GRCGYC	2 cut(s)	43, 371
BssSI	CACGAG	1 cut(s)	1728
BssT1I	CCWWGG	6 cut(s)	538, 702, 900, 963, 1662, 1775
Bst1107I	GTATAC	1 cut(s)	1065
Bst2BI	CACGAG	1 cut(s)	1728
Bst2UI	CCWGG	9 cut(s)	1304, 1398, 1818, 1891, 1896, 1942, 2019, 2145, 2211
Bst4CI	ACNGT	7 cut(s)	718, 843, 1228, 1638, 1711, 1754, 1856
Bst6I	CTCTTC	1 cut(s)	660
BstACI	GRCGYC	2 cut(s)	43, 371
BstAPI	GCANNNNNTGC	1 cut(s)	1019
BstBAI	YACGTR	1 cut(s)	866
BstC8I	GCNNGC	7 cut(s)	389, 477, 751, 956, 972, 1377, 2076
BstDEI	CTNAG	4 cut(s)	988, 1204, 1863, 2173
BstDSI	CCRYGG	1 cut(s)	702
BstENI	CCTNNNNNAGG	1 cut(s)	2142
BstF5I	GGATG	9 cut(s)	271, 469, 775, 1451, 1615, 1615, 1963, 2095, 2120
BstFNI	CGCG	3 cut(s)	318, 422, 972
BstH2I	RGCGCY	1 cut(s)	316
BstHHI	GCGC	4 cut(s)	315, 444, 972, 974
BstMAI	GTCTC	2 cut(s)	11, 1942
BstMWI	GCNNNNNNNGC	8 cut(s)	368, 441, 1001, 1010, 1019, 1273, 1313, 2164
BstNI	CCWGG	9 cut(s)	1304, 1398, 1818, 1891, 1896, 1942, 2019, 2145, 2211
BstPAI	GACNNNNGTC	1 cut(s)	1219
BstSFI	CTRYAG	2 cut(s)	456, 1269
BstSNI	TACGTA	1 cut(s)	866
BstUI	CGCG	3 cut(s)	318, 422, 972
BstV1I	GCAGC	7 cut(s)	579, 1328, 1336, 1477, 1501, 1630, 2257
BstV2I	GAAGAC	2 cut(s)	1500, 2025
BstX2I	RGATCY	9 cut(s)	58, 467, 847, 1359, 1657, 1676, 1791, 2014, 2185
BstXI	CCANNNNNNTGG	2 cut(s)	542, 1075
BstYI	RGATCY	9 cut(s)	58, 467, 847, 1359, 1657, 1676, 1791, 2014, 2185
BstZ17I	GTATAC	1 cut(s)	1065
BsuRI	GGCC	9 cut(s)	362, 391, 958, 1395, 1435, 1606, 1774, 1780, 1894
BtgI	CCRYGG	1 cut(s)	702
BtsCI	GGATG	9 cut(s)	271, 469, 775, 1451, 1615, 1615, 1963, 2095, 2120
BtsIMutI	CAGTG	4 cut(s)	723, 1436, 1634, 2061
Cac8I	GCNNGC	7 cut(s)	389, 477, 751, 956, 972, 1377, 2076
CaiI	CAGNNNCTG	1 cut(s)	841
CfoI	GCGC	4 cut(s)	315, 444, 972, 974
Cfr13I	GGNCC	7 cut(s)	389, 563, 658, 1328, 1394, 1604, 2214
CseI	GACGC	3 cut(s)	51, 360, 411
Csp6I	GTAC	4 cut(s)	805, 839, 1182, 2022
CspCI	CAANNNNNGTGG	2 cut(s)	1467, 1502
CviAII	CATG	3 cut(s)	683, 703, 1120
CviQI	GTAC	4 cut(s)	805, 839, 1182, 2022
DdeI	CTNAG	4 cut(s)	988, 1204, 1863, 2173
EaeI	YGGCCR	1 cut(s)	360
Eam1104I	CTCTTC	1 cut(s)	660
EarI	CTCTTC	1 cut(s)	660
Eco105I	TACGTA	1 cut(s)	866
Eco130I	CCWWGG	6 cut(s)	538, 702, 900, 963, 1662, 1775
Eco147I	AGGCCT	3 cut(s)	958, 1780, 1894
Eco24I	GRGCYC	1 cut(s)	477
Eco47I	GGWCC	4 cut(s)	563, 658, 1328, 2214
Eco57I	CTGAAG	6 cut(s)	959, 1262, 1551, 1584, 1888, 2031
EcoNI	CCTNNNNNAGG	1 cut(s)	2142
EcoO109I	RGGNCCY	1 cut(s)	2214
EcoRI	GAATTC	1 cut(s)	379
EcoRII	CCWGG	9 cut(s)	1302, 1396, 1816, 1889, 1894, 1940, 2017, 2143, 2209
EcoT14I	CCWWGG	6 cut(s)	538, 702, 900, 963, 1662, 1775
EcoT38I	GRGCYC	1 cut(s)	477
ErhI	CCWWGG	6 cut(s)	538, 702, 900, 963, 1662, 1775
Esp3I	CGTCTC	1 cut(s)	11
FaeI	CATG	3 cut(s)	686, 706, 1123
FalI	AAGNNNNNCTT	2 cut(s)	1768, 1800
FaqI	GGGAC	3 cut(s)	727, 1852, 2200
FatI	CATG	3 cut(s)	682, 702, 1119
FauI	CCCGC	3 cut(s)	242, 380, 492
FauNDI	CATATG	1 cut(s)	1843
FblI	GTMKAC	2 cut(s)	919, 1064
FokI	GGATG	9 cut(s)	278, 476, 782, 1438, 1602, 1622, 1950, 2082, 2107
FriOI	GRGCYC	1 cut(s)	477
FspBI	CTAG	3 cut(s)	735, 2220, 2226
GlaI	GCGC	4 cut(s)	314, 443, 971, 973
GsuI	CTGGAG	1 cut(s)	1924
HaeII	RGCGCY	1 cut(s)	316
HaeIII	GGCC	9 cut(s)	362, 391, 958, 1395, 1435, 1606, 1774, 1780, 1894
HapII	CCGG	8 cut(s)	384, 392, 509, 1607, 2101, 2183, 2230, 2249
HgaI	GACGC	3 cut(s)	51, 360, 411
HhaI	GCGC	4 cut(s)	315, 444, 972, 974
Hin1I	GRCGYC	2 cut(s)	43, 371
Hin1II	CATG	3 cut(s)	686, 706, 1123
Hin6I	GCGC	4 cut(s)	313, 442, 970, 972
HinP1I	GCGC	4 cut(s)	313, 442, 970, 972
HincII	GTYRAC	2 cut(s)	1224, 1233
HindII	GTYRAC	2 cut(s)	1224, 1233
HpaII	CCGG	8 cut(s)	384, 392, 509, 1607, 2101, 2183, 2230, 2249
HphI	GGTGA	5 cut(s)	388, 473, 1421, 1467, 1834
Hpy166II	GTNNAC	6 cut(s)	658, 920, 1046, 1065, 1224, 1233
Hpy188III	TCNNGA	6 cut(s)	561, 608, 674, 1047, 1682, 1805
Hpy8I	GTNNAC	6 cut(s)	658, 920, 1046, 1065, 1224, 1233
HpyAV	CCTTC	8 cut(s)	619, 867, 906, 969, 1290, 1575, 1599, 1709
HpyCH4III	ACNGT	7 cut(s)	718, 843, 1228, 1638, 1711, 1754, 1856
HpyCH4IV	ACGT	2 cut(s)	865, 2193
HpyCH4V	TGCA	6 cut(s)	797, 802, 1316, 1352, 1499, 2263
HpyF10VI	GCNNNNNNNGC	8 cut(s)	368, 441, 1001, 1010, 1019, 1273, 1313, 2164
HpyF3I	CTNAG	4 cut(s)	988, 1204, 1863, 2173
HpySE526I	ACGT	2 cut(s)	865, 2193
Hsp92I	GRCGYC	2 cut(s)	43, 371
Hsp92II	CATG	3 cut(s)	686, 706, 1123
HspAI	GCGC	4 cut(s)	313, 442, 970, 972
KflI	GGGWCCC	1 cut(s)	2214
LguI	GCTCTTC	1 cut(s)	660
LmnI	GCTCC	8 cut(s)	82, 225, 740, 757, 859, 967, 1299, 1429
Lsp1109I	GCAGC	7 cut(s)	579, 1328, 1336, 1477, 1501, 1630, 2257
LweI	GCATC	1 cut(s)	982
MaeI	CTAG	3 cut(s)	735, 2220, 2226
MaeII	ACGT	2 cut(s)	865, 2193
MaeIII	GTNAC	1 cut(s)	1885
MbiI	CCGCTC	2 cut(s)	220, 432
MflI	RGATCY	9 cut(s)	58, 467, 847, 1359, 1657, 1676, 1791, 2014, 2185
MhlI	GDGCHC	1 cut(s)	477
MlyI	GAGTC	6 cut(s)	272, 1229, 1795, 1954, 2075, 2165
MmeI	TCCRAC	6 cut(s)	135, 168, 306, 405, 534, 1306
MroXI	GAANNNNTTC	1 cut(s)	669
MseI	TTAA	7 cut(s)	782, 1109, 1386, 1740, 1850, 1985, 2133
MslI	CAYNNNNRTG	1 cut(s)	540
MspI	CCGG	8 cut(s)	384, 392, 509, 1607, 2101, 2183, 2230, 2249
Mva1269I	GAATGC	1 cut(s)	799
MvaI	CCWGG	9 cut(s)	1304, 1398, 1818, 1891, 1896, 1942, 2019, 2145, 2211
MvnI	CGCG	3 cut(s)	318, 422, 972
MwoI	GCNNNNNNNGC	8 cut(s)	368, 441, 1001, 1010, 1019, 1273, 1313, 2164
NciI	CCSGG	2 cut(s)	2101, 2231
NcoI	CCATGG	1 cut(s)	702
NdeI	CATATG	1 cut(s)	1843
NlaIII	CATG	3 cut(s)	686, 706, 1123
NlaIV	GGNNCC	7 cut(s)	565, 660, 1117, 1301, 1361, 2215, 2216
NmuCI	GTSAC	1 cut(s)	1885
OliI	CACNNNNGTG	1 cut(s)	540
PasI	CCCWGGG	1 cut(s)	1397
PauI	GCGCGC	1 cut(s)	970
PceI	AGGCCT	3 cut(s)	958, 1780, 1894
PciSI	GCTCTTC	1 cut(s)	660
PcsI	WCGNNNNNNNCGW	3 cut(s)	267, 279, 408
PctI	GAATGC	1 cut(s)	799
PdmI	GAANNNNTTC	1 cut(s)	669
PfeI	GAWTC	7 cut(s)	505, 557, 1685, 1767, 1825, 2148, 2237
PflFI	GACNNNGTC	1 cut(s)	1934
PfoI	TCCNGGA	2 cut(s)	1940, 2143
PleI	GAGTC	6 cut(s)	272, 1228, 1795, 1954, 2074, 2165
PpsI	GAGTC	6 cut(s)	272, 1228, 1795, 1954, 2074, 2165
Ppu21I	YACGTR	1 cut(s)	866
PpuMI	RGGWCCY	1 cut(s)	2214
PshAI	GACNNNNGTC	1 cut(s)	1219
PshBI	ATTAAT	1 cut(s)	1740
Psp5II	RGGWCCY	1 cut(s)	2214
Psp6I	CCWGG	9 cut(s)	1302, 1396, 1816, 1889, 1894, 1940, 2017, 2143, 2209
PspGI	CCWGG	9 cut(s)	1302, 1396, 1816, 1889, 1894, 1940, 2017, 2143, 2209
PspN4I	GGNNCC	7 cut(s)	565, 660, 1117, 1301, 1361, 2215, 2216
PspPI	GGNCC	7 cut(s)	389, 563, 658, 1328, 1394, 1604, 2214
PspPPI	RGGWCCY	1 cut(s)	2214
PstNI	CAGNNNCTG	1 cut(s)	841
PsuI	RGATCY	9 cut(s)	58, 467, 847, 1359, 1657, 1676, 1791, 2014, 2185
PsyI	GACNNNGTC	1 cut(s)	1934
PteI	GCGCGC	1 cut(s)	970
RsaI	GTAC	4 cut(s)	806, 840, 1183, 2023
RsaNI	GTAC	4 cut(s)	805, 839, 1182, 2022
RseI	CAYNNNNRTG	1 cut(s)	540
SapI	GCTCTTC	1 cut(s)	660
SaqAI	TTAA	7 cut(s)	782, 1109, 1386, 1740, 1850, 1985, 2133
Sau96I	GGNCC	7 cut(s)	389, 563, 658, 1328, 1394, 1604, 2214
SchI	GAGTC	6 cut(s)	272, 1229, 1795, 1954, 2075, 2165
SduI	GDGCHC	1 cut(s)	477
SfaNI	GCATC	1 cut(s)	982
SfcI	CTRYAG	2 cut(s)	456, 1269
SinI	GGWCC	4 cut(s)	563, 658, 1328, 2214
SmiMI	CAYNNNNRTG	1 cut(s)	540
SmlI	CTYRAG	3 cut(s)	329, 526, 608
SmoI	CTYRAG	3 cut(s)	329, 526, 608
SnaBI	TACGTA	1 cut(s)	866
SpeI	ACTAGT	1 cut(s)	734
SseBI	AGGCCT	3 cut(s)	958, 1780, 1894
SspMI	CTAG	3 cut(s)	735, 2220, 2226
StuI	AGGCCT	3 cut(s)	958, 1780, 1894
StyI	CCWWGG	6 cut(s)	538, 702, 900, 963, 1662, 1775
TaaI	ACNGT	7 cut(s)	718, 843, 1228, 1638, 1711, 1754, 1856
TaiI	ACGT	2 cut(s)	868, 2196
TaqI	TCGA	5 cut(s)	226, 503, 791, 832, 1309
TatI	WGTACW	2 cut(s)	804, 1181
TauI	GCSGC	5 cut(s)	240, 297, 318, 422, 435
TfiI	GAWTC	7 cut(s)	505, 557, 1685, 1767, 1825, 2148, 2237
Tru1I	TTAA	7 cut(s)	782, 1109, 1386, 1740, 1850, 1985, 2133
Tru9I	TTAA	7 cut(s)	782, 1109, 1386, 1740, 1850, 1985, 2133
TscAI	CASTG	4 cut(s)	723, 1443, 1641, 2061
TseFI	GTSAC	1 cut(s)	1885
TseI	GCWGC	8 cut(s)	592, 1316, 1349, 1465, 1514, 1643, 2245, 2263
Tsp45I	GTSAC	1 cut(s)	1885
TspDTI	ATGAA	5 cut(s)	699, 903, 1763, 2031, 2084
TspGWI	ACGGA	3 cut(s)	85, 212, 300
TspRI	CASTG	4 cut(s)	723, 1443, 1641, 2061
Tth111I	GACNNNGTC	1 cut(s)	1934
VpaK11BI	GGWCC	4 cut(s)	563, 658, 1328, 2214
VspI	ATTAAT	1 cut(s)	1740
XagI	CCTNNNNNAGG	1 cut(s)	2142
XapI	RAATTY	4 cut(s)	379, 1088, 1987, 2050
XmiI	GTMKAC	2 cut(s)	919, 1064
XmnI	GAANNNNTTC	1 cut(s)	669
XspI	CTAG	3 cut(s)	735, 2220, 2226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.