Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0013612

Physical Location & Seq

Genomic Coordinates Reverse (-)

42139105 .. 42144780

Gene Structure 5676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG250900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGGTAAGGTAGTGGAGACGAAGAAGAAGAAGAAGAAAGGACGCCCCTCTCTTTTAGATCTCCAAAAACGGAATATCAGAGAGCAACAACATCACCTCCACCGCACCTCCAACAATTCCAATTCCACTTCTGCCCCTCGTTCCAACCCTATTTACACCCCTACTGCCCCTCCCACCGCCACCGCCACCGCCAACCACAACCAGCCCCCGCTCCGTCGATCCACCCGCCGCAACCCCAACCCCGACGACGACGAGGATGACGACGACGACTCCGACGGAAACGGCGGCGTTTCGGACGGGAAGCGCCGCGAGAAGAAACTCAAGCTGGTTCTCAAATTGCCGAAATCGTCCGCGAATTCGGCGTCGGTGAATTCCGGCGGGTCGGAGAATGACGACGACGACGACAACGCCGCGTCGGAGAGCGGCAAAAAGCGTAAGATCAATGCTATAGGGGATGGATCTGGGCTCGCTCACCCGCCAAAGGGCGACAAGTCGATTCCTGCTACAAACCCCTCCTCAAGCACCCACCAAGGTGGGGCAAAGTTGGATTCTGGACCCTCTACTCCTTTACCCAATACAAAGCTGCTACTTTTCGTTCTTGAGAGGCTTCAAAAGAAGGACACCTATGGGGTGTTTTCTGAACCTGTGGACCCGGAAGAGCTTCCAGACTACCATGAAGTAATAGACAACCCTATGGATTTTGGGACAGTGAAGAAGAAACTTACTAGTGGAGCGTATGCCAGCTTGGAGCAGTTTGAGGATGACATTTTCTTAATTTGCTCGAATGCAATGCAGTACAATGCCCCAGATACTATATATTTTCGACAGGCACGCTCCATCCATGAGCTTGCGAAAAAGAACTTTGAAAATTTGAGGCAAGATAGTGATGATAATGAACCAGAACCCAAGGTCGTAAGAAGGGGTAGACCACCGACCAAAAATCTGAAGAAACCACTTGGCAGGCCTTCCTTGGAGCGCGCTGGTTCAGAGTTCTCAGATGCCACTCTCGCTACTGGGGCAGAAAATGCCATATTGTCCAATTATGATCGTTCACGAAGTAATGATGTGTATACTAGTTGGTTGGCTGATAACAAATTTGAGAGGAATGATGACTTAACAGGTTCCATGTTGAGAGGTAATTCCAAGACTGGGAGAAAGCAGTTTGTATTTGATGAGAACAGGCGTAATACATATCTACACTCTCATCCCTCAGCTAATGGACGAGAGTCAACCGTGTTGACTACATTTGATGGAGAAAGAAAACAGCTAATGCCTGTAGGGCTTCAGTCAGATGGTTATGCAAGGAGCCTGGCTCGATTTGCAGCGAATCTTGGACCTGTTGCTTGGAGAATTGCTGCACAAAGGATCCAAAGGTCTTTGCCTGCTGGTGTTAAATTCGGCCCTGGGTGGGTTGGTGAAAATGATGTTGCTCCTCATAGGCCACTGGTATTAGCCTCATCCTCAAAAGAGCAGCCATCTTCACCACAGCCCTTGCCCTTTCGTGCAAACTCGTCTTCTGCTGCAATATCTTGCTCTATTGAACCAAATAAAGATAAATTATCAGACAAACCTTCAGGTCACAACTTGTCAGAGAAACATGCCCCTTCTATTTCTTCAGGGCCGGATGACCATCCAAGCAGTCCTCCCCCACTGTCTGCTGCCACCTCATCAGATCCCTTAGTTGCTAACAGATCTCCTGAATCCCTCACAGGAAAAGGAGAAACTGTTGAAGGAACAAACTCTCGTGGTGGGATTAATATGATGAACAGTAATCTTGGTGGAATCAGGCCAAGGCCTCCTTTTCAGATCCATCGGACTCCTGAAATACAACCTGGGGTGAATGGATTGAATGGGACATATGGATTAAACCGTCTTGCTCAGGTAGGGAAACAAGTTGGCGTGACCAGGCCTGGTGGCTTCAGCTTCCAATCATCTCAAATGCTTGACCAAGTCTCCAGGACTAATACTAACCTGACTCATCCAGCGACTTCAAACAGCTTAAATTCAGAAGAAACCAAGCCCTCTGAAGATCCAGGTACAAAGCAGTCCTCTGGTTCATATTCAAATTCAGTGAAAAATGAGTCATTGCCAGCCCGAACATCGGGGCTTCATCCCCGGTCATCTTGGCGAGGGTCATCCCAACAGATTAAACCTAATCCAGGATTCTCTCCGCAACAGAAGCCTGACTCAGTTCCACCAGATCTGAACGTCAGATTTCAGTCACCAGGGTCCCCTAGTTCTAGCCGGGCTGATTCAACGCAGCCGGATTTAGCATTGCAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

761

Amino Acids

82.46

Weight (kDa)

9.27

Isoelectric Point (pI)

53.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	197 - 278	1.5e-24	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013612)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16690
malus_domestica	MD05G1135100.v1.1 MD10G1140600.v1.1
prunus_persica	Prupe.8G179000_v2.0.a1
pyrus_communis	pycom05g13170 pycom10g11920
rosa_chinensis	RchiOBHm_Chr6g0280831
rosa_laevigata	RLG00000013027
rosa_multiflora	Rmu_co8368811.1_g000001 Rmu_sc0003153.1_g000023 Rmu_sc0038972.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187590
rosa_rugosa	Rorug06G0134800
rosa_samantha	Rh6AG248200 Rh6BG249700 Rh6CG250900 Rh6DG242500
rosa_wichuraiana	Rw6G021450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	211, 423
AccI	GTMKAC	2 cut(s)	925, 1070
AccII	CGCG	4 cut(s)	309, 353, 413, 978
AclWI	GGATC	7 cut(s)	213, 466, 1360, 1373, 1667, 1801, 2024
AcsI	RAATTY	7 cut(s)	355, 370, 868, 1094, 1394, 2002, 2065
AcuI	CTGAAG	6 cut(s)	965, 1268, 1557, 1599, 1903, 2046
AcyI	GRCGYC	2 cut(s)	43, 362
AfaI	GTAC	2 cut(s)	797, 2038
AfiI	CCNNNNNNNGG	7 cut(s)	481, 482, 535, 1149, 1408, 2101, 2159
AgsI	TTSAA	8 cut(s)	611, 866, 1541, 1730, 1849, 1992, 2064, 2256
AhlI	ACTAGT	2 cut(s)	725, 1073
AjnI	CCWGG	9 cut(s)	1308, 1402, 1831, 1904, 1909, 1955, 2032, 2158, 2224
AleI	CACNNNNGTG	1 cut(s)	531
Alw26I	GTCTC	2 cut(s)	11, 1957
AlwI	GGATC	7 cut(s)	213, 466, 1360, 1373, 1667, 1801, 2024
AoxI	GGCC	7 cut(s)	962, 1399, 1439, 1619, 1787, 1793, 1907
ApeKI	GCWGC	8 cut(s)	583, 1322, 1355, 1471, 1520, 1658, 2260, 2278
ApoI	RAATTY	7 cut(s)	355, 370, 868, 1094, 1394, 2002, 2065
ArsI	GACNNNNNNTTYG	2 cut(s)	347, 379
AseI	ATTAAT	1 cut(s)	1755
Asp700I	GAANNNNTTC	1 cut(s)	660
AspLEI	GCGC	3 cut(s)	306, 978, 980
AspS9I	GGNCC	6 cut(s)	554, 649, 1334, 1400, 1619, 2229
AsuC2I	CCSGG	3 cut(s)	653, 2116, 2246
AsuHPI	GGTGA	7 cut(s)	86, 379, 464, 1427, 1473, 1849, 2214
AvaII	GGWCC	4 cut(s)	554, 649, 1334, 2229
BamHI	GGATCC	1 cut(s)	1365
BanII	GRGCYC	1 cut(s)	468
BauI	CACGAG	1 cut(s)	1743
BbsI	GAAGAC	1 cut(s)	1506
BbvCI	CCTCAGC	1 cut(s)	1210
BbvI	GCAGC	7 cut(s)	570, 1334, 1342, 1483, 1507, 1645, 2272
BccI	CCATC	7 cut(s)	449, 845, 1244, 1286, 1483, 1638, 1818
BceAI	ACGGC	1 cut(s)	298
BcgI	CGANNNNNNTGC	2 cut(s)	772, 806
BciT130I	CCWGG	9 cut(s)	1310, 1404, 1833, 1906, 1911, 1957, 2034, 2160, 2226
BcnI	CCSGG	3 cut(s)	653, 2116, 2246
BcoDI	GTCTC	2 cut(s)	11, 1957
BcuI	ACTAGT	2 cut(s)	725, 1073
BfaI	CTAG	4 cut(s)	726, 1074, 2235, 2241
BfmI	CTRYAG	2 cut(s)	447, 1275
BfoI	RGCGCY	1 cut(s)	307
BglI	GCCNNNNNGGC	1 cut(s)	1279
BglII	AGATCT	3 cut(s)	58, 1691, 2200
Bme18I	GGWCC	4 cut(s)	554, 649, 1334, 2229
BmgT120I	GGNCC	6 cut(s)	554, 649, 1334, 1400, 1619, 2229
BmiI	GGNNCC	7 cut(s)	556, 651, 1123, 1307, 1367, 2230, 2231
BmrI	ACTGGG	2 cut(s)	1023, 1158
BmsI	GCATC	1 cut(s)	988
BmuI	ACTGGG	2 cut(s)	1023, 1158
BoxI	GACNNNNGTC	1 cut(s)	1225
BpiI	GAAGAC	1 cut(s)	1506
BplI	GAGNNNNNCTC	2 cut(s)	1297, 1329
BpmI	CTGGAG	1 cut(s)	1939
Bpu10I	CCTNAGC	2 cut(s)	1210, 1878
BpuEI	CTTGAG	3 cut(s)	305, 502, 620
BpuMI	CCSGG	3 cut(s)	653, 2116, 2246
BsaBI	GATNNNNATC	1 cut(s)	1629
BsaHI	GRCGYC	2 cut(s)	43, 362
BsaJI	CCNNGG	9 cut(s)	529, 906, 969, 1402, 1403, 1790, 1832, 2114, 2225
Bsc4I	CCNNNNNNNGG	7 cut(s)	481, 482, 535, 1149, 1408, 2101, 2159
Bse1I	ACTGG	3 cut(s)	1018, 1153, 1449
Bse3DI	GCAATG	3 cut(s)	795, 2084, 2273
Bse8I	GATNNNNATC	1 cut(s)	1629
BseBI	CCWGG	9 cut(s)	1310, 1404, 1833, 1906, 1911, 1957, 2034, 2160, 2226
BseDI	CCNNGG	9 cut(s)	529, 906, 969, 1402, 1403, 1790, 1832, 2114, 2225
BseJI	GATNNNNATC	1 cut(s)	1629
BseLI	CCNNNNNNNGG	7 cut(s)	481, 482, 535, 1149, 1408, 2101, 2159
BseMI	GCAATG	3 cut(s)	795, 2084, 2273
BseMII	CTCAG	4 cut(s)	1008, 1224, 1892, 2202
BseNI	ACTGG	3 cut(s)	1018, 1153, 1449
BsePI	GCGCGC	1 cut(s)	976
BseRI	GAGGAG	2 cut(s)	505, 1422
BseXI	GCAGC	7 cut(s)	570, 1334, 1342, 1483, 1507, 1645, 2272
BsgI	GTGCAG	1 cut(s)	1341
Bsh1236I	CGCG	4 cut(s)	309, 353, 413, 978
BshFI	GGCC	7 cut(s)	964, 1401, 1441, 1621, 1789, 1795, 1909
BsiSI	CCGG	6 cut(s)	375, 653, 1622, 2116, 2245, 2264
BslFI	GGGAC	3 cut(s)	718, 1867, 2215
BslI	CCNNNNNNNGG	7 cut(s)	481, 482, 535, 1149, 1408, 2101, 2159
BsmAI	GTCTC	2 cut(s)	11, 1957
BsmBI	CGTCTC	1 cut(s)	11
BsmFI	GGGAC	3 cut(s)	718, 1867, 2215
BsmI	GAATGC	1 cut(s)	790
BsnI	GGCC	7 cut(s)	964, 1401, 1441, 1621, 1789, 1795, 1909
Bsp1286I	GDGCHC	1 cut(s)	468
BspANI	GGCC	7 cut(s)	964, 1401, 1441, 1621, 1789, 1795, 1909
BspCNI	CTCAG	4 cut(s)	1007, 1223, 1891, 2201
BspFNI	CGCG	4 cut(s)	309, 353, 413, 978
BspLI	GGNNCC	7 cut(s)	556, 651, 1123, 1307, 1367, 2230, 2231
BspPI	GGATC	7 cut(s)	213, 466, 1360, 1373, 1667, 1801, 2024
BspQI	GCTCTTC	1 cut(s)	651
BsrBI	CCGCTC	2 cut(s)	211, 423
BsrDI	GCAATG	3 cut(s)	795, 2084, 2273
BsrI	ACTGG	3 cut(s)	1018, 1153, 1449
BssECI	CCNNGG	9 cut(s)	529, 906, 969, 1402, 1403, 1790, 1832, 2114, 2225
BssHII	GCGCGC	1 cut(s)	976
BssNAI	GTATAC	1 cut(s)	1071
BssNI	GRCGYC	2 cut(s)	43, 362
BssSI	CACGAG	1 cut(s)	1743
BssT1I	CCWWGG	4 cut(s)	529, 906, 969, 1790
Bst1107I	GTATAC	1 cut(s)	1071
Bst2BI	CACGAG	1 cut(s)	1743
Bst2UI	CCWGG	9 cut(s)	1310, 1404, 1833, 1906, 1911, 1957, 2034, 2160, 2226
Bst4CI	ACNGT	6 cut(s)	709, 1234, 1653, 1726, 1769, 1871
Bst6I	CTCTTC	1 cut(s)	651
BstACI	GRCGYC	2 cut(s)	43, 362
BstAPI	GCANNNNNTGC	1 cut(s)	1025
BstC8I	GCNNGC	8 cut(s)	468, 742, 832, 849, 962, 978, 1383, 2091
BstDEI	CTNAG	5 cut(s)	994, 1210, 1678, 1878, 2188
BstENI	CCTNNNNNAGG	1 cut(s)	2157
BstFNI	CGCG	4 cut(s)	309, 353, 413, 978
BstH2I	RGCGCY	1 cut(s)	307
BstHHI	GCGC	3 cut(s)	306, 978, 980
BstMAI	GTCTC	2 cut(s)	11, 1957
BstMWI	GCNNNNNNNGC	7 cut(s)	359, 1007, 1016, 1025, 1279, 1319, 2179
BstNI	CCWGG	9 cut(s)	1310, 1404, 1833, 1906, 1911, 1957, 2034, 2160, 2226
BstNSI	RCATGY	1 cut(s)	1601
BstPAI	GACNNNNGTC	1 cut(s)	1225
BstSFI	CTRYAG	2 cut(s)	447, 1275
BstUI	CGCG	4 cut(s)	309, 353, 413, 978
BstV1I	GCAGC	7 cut(s)	570, 1334, 1342, 1483, 1507, 1645, 2272
BstV2I	GAAGAC	1 cut(s)	1506
BstX2I	RGATCY	8 cut(s)	58, 458, 1365, 1672, 1691, 1806, 2029, 2200
BstXI	CCANNNNNNTGG	1 cut(s)	533
BstYI	RGATCY	8 cut(s)	58, 458, 1365, 1672, 1691, 1806, 2029, 2200
BstZ17I	GTATAC	1 cut(s)	1071
BsuRI	GGCC	7 cut(s)	964, 1401, 1441, 1621, 1789, 1795, 1909
BtsIMutI	CAGTG	4 cut(s)	714, 1442, 1649, 2076
Cac8I	GCNNGC	8 cut(s)	468, 742, 832, 849, 962, 978, 1383, 2091
CfoI	GCGC	3 cut(s)	306, 978, 980
Cfr13I	GGNCC	6 cut(s)	554, 649, 1334, 1400, 1619, 2229
CseI	GACGC	3 cut(s)	51, 351, 402
Csp6I	GTAC	2 cut(s)	796, 2037
CspCI	CAANNNNNGTGG	2 cut(s)	1473, 1508
CviAII	CATG	4 cut(s)	674, 842, 1126, 1598
CviQI	GTAC	2 cut(s)	796, 2037
DdeI	CTNAG	5 cut(s)	994, 1210, 1678, 1878, 2188
Eam1104I	CTCTTC	1 cut(s)	651
EarI	CTCTTC	1 cut(s)	651
Eco130I	CCWWGG	4 cut(s)	529, 906, 969, 1790
Eco147I	AGGCCT	3 cut(s)	964, 1795, 1909
Eco24I	GRGCYC	1 cut(s)	468
Eco47I	GGWCC	4 cut(s)	554, 649, 1334, 2229
Eco57I	CTGAAG	6 cut(s)	965, 1268, 1557, 1599, 1903, 2046
EcoNI	CCTNNNNNAGG	1 cut(s)	2157
EcoO109I	RGGNCCY	1 cut(s)	2229
EcoRI	GAATTC	2 cut(s)	355, 370
EcoRII	CCWGG	9 cut(s)	1308, 1402, 1831, 1904, 1909, 1955, 2032, 2158, 2224
EcoT14I	CCWWGG	4 cut(s)	529, 906, 969, 1790
EcoT38I	GRGCYC	1 cut(s)	468
ErhI	CCWWGG	4 cut(s)	529, 906, 969, 1790
Esp3I	CGTCTC	1 cut(s)	11
FaeI	CATG	4 cut(s)	677, 845, 1129, 1601
FalI	AAGNNNNNCTT	2 cut(s)	1783, 1815
FaqI	GGGAC	3 cut(s)	718, 1867, 2215
FatI	CATG	4 cut(s)	673, 841, 1125, 1597
FauI	CCCGC	4 cut(s)	216, 233, 371, 483
FauNDI	CATATG	1 cut(s)	1858
FblI	GTMKAC	2 cut(s)	925, 1070
FriOI	GRGCYC	1 cut(s)	468
FspBI	CTAG	4 cut(s)	726, 1074, 2235, 2241
GlaI	GCGC	3 cut(s)	305, 977, 979
GsuI	CTGGAG	1 cut(s)	1939
HaeII	RGCGCY	1 cut(s)	307
HaeIII	GGCC	7 cut(s)	964, 1401, 1441, 1621, 1789, 1795, 1909
HapII	CCGG	6 cut(s)	375, 653, 1622, 2116, 2245, 2264
HgaI	GACGC	3 cut(s)	51, 351, 402
HhaI	GCGC	3 cut(s)	306, 978, 980
Hin1I	GRCGYC	2 cut(s)	43, 362
Hin1II	CATG	4 cut(s)	677, 845, 1129, 1601
Hin6I	GCGC	3 cut(s)	304, 976, 978
HinP1I	GCGC	3 cut(s)	304, 976, 978
HincII	GTYRAC	2 cut(s)	1230, 1239
HindII	GTYRAC	2 cut(s)	1230, 1239
HpaII	CCGG	6 cut(s)	375, 653, 1622, 2116, 2245, 2264
HphI	GGTGA	7 cut(s)	86, 379, 464, 1427, 1473, 1849, 2214
Hpy166II	GTNNAC	6 cut(s)	649, 926, 1052, 1071, 1230, 1239
Hpy188III	TCNNGA	6 cut(s)	552, 599, 665, 1053, 1697, 1820
Hpy8I	GTNNAC	6 cut(s)	649, 926, 1052, 1071, 1230, 1239
HpyAV	CCTTC	6 cut(s)	610, 912, 975, 1581, 1614, 1724
HpyCH4III	ACNGT	6 cut(s)	709, 1234, 1653, 1726, 1769, 1871
HpyCH4IV	ACGT	1 cut(s)	2208
HpyCH4V	TGCA	8 cut(s)	788, 793, 1301, 1322, 1358, 1505, 1523, 2278
HpyF10VI	GCNNNNNNNGC	7 cut(s)	359, 1007, 1016, 1025, 1279, 1319, 2179
HpyF3I	CTNAG	5 cut(s)	994, 1210, 1678, 1878, 2188
HpySE526I	ACGT	1 cut(s)	2208
Hsp92I	GRCGYC	2 cut(s)	43, 362
Hsp92II	CATG	4 cut(s)	677, 845, 1129, 1601
HspAI	GCGC	3 cut(s)	304, 976, 978
KflI	GGGWCCC	1 cut(s)	2229
LguI	GCTCTTC	1 cut(s)	651
LmnI	GCTCC	7 cut(s)	216, 731, 748, 839, 973, 1305, 1435
Lsp1109I	GCAGC	7 cut(s)	570, 1334, 1342, 1483, 1507, 1645, 2272
LweI	GCATC	1 cut(s)	988
MaeI	CTAG	4 cut(s)	726, 1074, 2235, 2241
MaeII	ACGT	1 cut(s)	2208
MaeIII	GTNAC	3 cut(s)	1577, 1900, 2220
MbiI	CCGCTC	2 cut(s)	211, 423
MflI	RGATCY	8 cut(s)	58, 458, 1365, 1672, 1691, 1806, 2029, 2200
MhlI	GDGCHC	1 cut(s)	468
MlyI	GAGTC	6 cut(s)	263, 1235, 1810, 1969, 2090, 2180
MmeI	TCCRAC	6 cut(s)	135, 168, 297, 363, 396, 525
MroXI	GAANNNNTTC	1 cut(s)	660
MseI	TTAA	7 cut(s)	773, 1115, 1392, 1755, 1865, 2000, 2148
MslI	CAYNNNNRTG	1 cut(s)	531
MspI	CCGG	6 cut(s)	375, 653, 1622, 2116, 2245, 2264
Mva1269I	GAATGC	1 cut(s)	790
MvaI	CCWGG	9 cut(s)	1310, 1404, 1833, 1906, 1911, 1957, 2034, 2160, 2226
MvnI	CGCG	4 cut(s)	309, 353, 413, 978
MwoI	GCNNNNNNNGC	7 cut(s)	359, 1007, 1016, 1025, 1279, 1319, 2179
NciI	CCSGG	3 cut(s)	653, 2116, 2246
NdeI	CATATG	1 cut(s)	1858
NlaIII	CATG	4 cut(s)	677, 845, 1129, 1601
NlaIV	GGNNCC	7 cut(s)	556, 651, 1123, 1307, 1367, 2230, 2231
NmuCI	GTSAC	3 cut(s)	1577, 1900, 2220
NspI	RCATGY	1 cut(s)	1601
OliI	CACNNNNGTG	1 cut(s)	531
PasI	CCCWGGG	1 cut(s)	1403
PauI	GCGCGC	1 cut(s)	976
PceI	AGGCCT	3 cut(s)	964, 1795, 1909
PciSI	GCTCTTC	1 cut(s)	651
PcsI	WCGNNNNNNNCGW	3 cut(s)	258, 270, 399
PctI	GAATGC	1 cut(s)	790
PdmI	GAANNNNTTC	1 cut(s)	660
PfeI	GAWTC	7 cut(s)	496, 548, 1327, 1700, 1782, 2163, 2252
PflFI	GACNNNGTC	1 cut(s)	1949
PfoI	TCCNGGA	2 cut(s)	1955, 2158
PleI	GAGTC	6 cut(s)	263, 1234, 1810, 1969, 2089, 2180
PpsI	GAGTC	6 cut(s)	263, 1234, 1810, 1969, 2089, 2180
PpuMI	RGGWCCY	1 cut(s)	2229
PshAI	GACNNNNGTC	1 cut(s)	1225
PshBI	ATTAAT	1 cut(s)	1755
Psp5II	RGGWCCY	1 cut(s)	2229
Psp6I	CCWGG	9 cut(s)	1308, 1402, 1831, 1904, 1909, 1955, 2032, 2158, 2224
PspGI	CCWGG	9 cut(s)	1308, 1402, 1831, 1904, 1909, 1955, 2032, 2158, 2224
PspN4I	GGNNCC	7 cut(s)	556, 651, 1123, 1307, 1367, 2230, 2231
PspPI	GGNCC	6 cut(s)	554, 649, 1334, 1400, 1619, 2229
PspPPI	RGGWCCY	1 cut(s)	2229
PsuI	RGATCY	8 cut(s)	58, 458, 1365, 1672, 1691, 1806, 2029, 2200
PsyI	GACNNNGTC	1 cut(s)	1949
PteI	GCGCGC	1 cut(s)	976
RsaI	GTAC	2 cut(s)	797, 2038
RsaNI	GTAC	2 cut(s)	796, 2037
RseI	CAYNNNNRTG	1 cut(s)	531
SapI	GCTCTTC	1 cut(s)	651
SaqAI	TTAA	7 cut(s)	773, 1115, 1392, 1755, 1865, 2000, 2148
Sau96I	GGNCC	6 cut(s)	554, 649, 1334, 1400, 1619, 2229
SchI	GAGTC	6 cut(s)	263, 1235, 1810, 1969, 2090, 2180
SduI	GDGCHC	1 cut(s)	468
SfaNI	GCATC	1 cut(s)	988
SfcI	CTRYAG	2 cut(s)	447, 1275
SinI	GGWCC	4 cut(s)	554, 649, 1334, 2229
SmiMI	CAYNNNNRTG	1 cut(s)	531
SmlI	CTYRAG	3 cut(s)	320, 517, 599
SmoI	CTYRAG	3 cut(s)	320, 517, 599
SpeI	ACTAGT	2 cut(s)	725, 1073
SseBI	AGGCCT	3 cut(s)	964, 1795, 1909
SspMI	CTAG	4 cut(s)	726, 1074, 2235, 2241
StuI	AGGCCT	3 cut(s)	964, 1795, 1909
StyI	CCWWGG	4 cut(s)	529, 906, 969, 1790
TaaI	ACNGT	6 cut(s)	709, 1234, 1653, 1726, 1769, 1871
TaiI	ACGT	1 cut(s)	2211
TaqI	TCGA	5 cut(s)	217, 494, 782, 823, 1315
TatI	WGTACW	1 cut(s)	795
TauI	GCSGC	5 cut(s)	231, 288, 309, 413, 426
TfiI	GAWTC	7 cut(s)	496, 548, 1327, 1700, 1782, 2163, 2252
Tru1I	TTAA	7 cut(s)	773, 1115, 1392, 1755, 1865, 2000, 2148
Tru9I	TTAA	7 cut(s)	773, 1115, 1392, 1755, 1865, 2000, 2148
TscAI	CASTG	4 cut(s)	714, 1449, 1656, 2076
TseFI	GTSAC	3 cut(s)	1577, 1900, 2220
TseI	GCWGC	8 cut(s)	583, 1322, 1355, 1471, 1520, 1658, 2260, 2278
Tsp45I	GTSAC	3 cut(s)	1577, 1900, 2220
TspDTI	ATGAA	5 cut(s)	690, 909, 1778, 2046, 2099
TspGWI	ACGGA	3 cut(s)	85, 203, 291
TspRI	CASTG	4 cut(s)	714, 1449, 1656, 2076
Tth111I	GACNNNGTC	1 cut(s)	1949
VpaK11BI	GGWCC	4 cut(s)	554, 649, 1334, 2229
VspI	ATTAAT	1 cut(s)	1755
XagI	CCTNNNNNAGG	1 cut(s)	2157
XapI	RAATTY	7 cut(s)	355, 370, 868, 1094, 1394, 2002, 2065
XceI	RCATGY	1 cut(s)	1601
XmiI	GTMKAC	2 cut(s)	925, 1070
XmnI	GAANNNNTTC	1 cut(s)	660
XspI	CTAG	4 cut(s)	726, 1074, 2235, 2241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.