Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001036

Physical Location & Seq

Genomic Coordinates Reverse (-)

27048643 .. 27054828

Gene Structure 6186 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1139800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGAGTGGAGCTGTTCTTGTTGCTGTTGCTGCTGCAATTGGTAACTTGTTGCAAGGATGGGACAACGCGACTATCGCAGCTTCTGTTTTGTACATAAAAAGGGAATTCAACTTGGAAAGTGAACCTGCCGTGGAAGGGCTGATTGTGGCCATGTCGCTCATAGGCGCAACTGTGGTTACATTTTGTTCTGGAGCCGTAGCAGACTGGCTAGGCCGCCGCCCTATGCTTATAATCTCTTCTGTCTTTTACTTTCTTAGTGGTATTGTAATGCTGTGGTCTCCCAATGTTTATATCCTTCTCTTGGCGCGGCTTTTAGATGGTTTTGGGATTGGTTTGGCGGTTACCTTGGTACCACTTTATATATCTGAGACAGCCCCGCCTGAGATAAGGGGATCGTTGAATACCCTTCCGCAGTTTACTGGCTCCGGTGGGATGTTCTTGTCATATTGCATGGTTTTTGGGATGTCGTTGACTGAGTCACCAAGTTGGAGGTTGATGCTTGGTGTTCTCTCTATTCCTTCTCTTGTTTATTTTGTATTGACCGTGTTCTTCTTGCCAGAGTCTCCACGATGGCTTGTGAGTAAGGGACGGATGCTTGAGGCCAAACAAGTTCTACAGAGGCTGCGTGGAATAGAAGATGTCTCTGGTGAAATGGCTTTACTTGTTGAGGGTCTTGGAGTTGGGGGTGAAACATCTTTTGAGGAGTACATAATTGGCCCAGAGGATGACCTCACTGATGACCACGATTTATCCGCTGAAAAGGATAAAATCAGATTATATGGGCCTGAACAAGGACAATCCTGGGTTGCCAGACCTGTAACTGGGCAAAGCACTCTTGGACTTGTGTCTCGACATGCAAGCATGGTAAATCAAAGCGGTATTGTTGATCCTCTCGTCTCTCTCTTTGGCAGTGTACATGAGAAGCTCCCCGATACAGGAAGTAAGGGAAGTATGCTTTTTCCGCACTTTGGCAGCATGTTCAGTGTGGGAGGGAATCAGCCTAGACACGAAGAGTGGGACGAGGAAAGCCTTGCCAGAGAAGGAGAGGGTTATGCATCTGATGCAGCTGGTGGTGTTTCTGATGACAATTTGCAGAGTCCATTGATCTCGCGTCAGGCAACAAGCCTTGAAAAAGACATTGGCCCACCTCCACATGGAAGCCTTGCTAGCATAAGAAACAGCAGTCTCATTGGTGGAGAGGGAGCTAGTAGCACCGGGATTGGTGGCGGTTGGCAGCTGGCGTGGAAATGGTGTGAGAGAGAAGGCCAAGATGGACACAAGGAAGGAGGGTTTAAAAGAATTTATTTACACCAGGAGGGTGATGCTGCATCTCGTCGTGGATCTATTGTTTCGATTCCCGGTGGTGATGTACCGAACGATGGTCAGTTCTTCCAGGCTGCTGCTTTGGTGAGTGAACCGGCTCTTTATTCACGTGAGCTTATGAATCAGCATCCAGTTGGACCGGCAATGGTTAACCCAGCTGCAACTCCTGCAAAAGGACCAAGTTGGAGTGACCTTTTCGAACCCGGAGTCAAGCATGCTTTGGTTGTTGGGGTGGGAATTCAGATACTTCAGCAGTTTTCTGGCATAAACGGGGTTCTCTACTACACGCCTCAAATTCTTGAGCAGGCGGGCGTTGGGGTTCTTCTTTCGAATTTGGGCATTAGTTCAGCTTCTGCATCTCTGCTTATCAGTGCAGTAACAACCTTGCTGATGCTTCCTAGCATAGCCATTGCCATGAGGCTCATGGATTTAGCCGGCAGAAGGAGTTTGCTGCTCGGCACAATCCCTGTCCTGATAGTGTCTCTGGCCATCCTAGTCCTCGGAAGTCTTGTGAATATGGGAAGTGTTGTAAATGCATCAGTTTCGACTGTCAGTGTTGTGCTCTACTTCTGTTTCTTTGTTATGGGGTTTGGTCCAATCCCCAACATACTCTGTGCAGAAATCTTTCCCACCAGAGTTCGAGGCCTCTGCATTGCCATCTGCGCCCTCACATTCTGGATTGGTGATATCATTGTCACCTACTCACTTCCGGTGATGCTCAAATCTGTTGGCCTTGCTGGTGTTTTTGGCATGTATGCAGTTGTGTGCGTCATAGCGTTTATCTTTGTTTTCTTGAAAGTTCCCGAGACCAAAGGCATGCCCCTTGAAGTGATTACCGAGTTTTTCTCTGTTGGTGCAAAGCAGGCAGCAGCTGCCAAGAACAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

737

Amino Acids

78.28

Weight (kDa)

5.1

Isoelectric Point (pI)

41.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	7 - 223	7.8e-53	Sugar (and other) transporter
MFS_1	PF07690	12 - 195	1.5e-20	Major Facilitator Superfamily
Sugar_tr	PF00083	500 - 723	1e-42	Sugar (and other) transporter
MFS_1	PF07690	549 - 712	2e-10	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300
fragaria_vesca	FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950
malus_domestica	MD05G1139800.v1.1 MD06G1005100.v1.1 MD10G1142100.v1.1
prunus_persica	Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1
pyrus_communis	pycom05g13500 pycom10g12180
rosa_chinensis	RchiOBHm_Chr6g0280981 RchiOBHm_Chr7g0216501
rosa_laevigata	RLG00000002567 RLG00000002578 RLG00000013010
rosa_multiflora	Rmu_sc0000692.1_g000001 Rmu_sc0030247.1_g000002 Rmu_sc0030424.1_g000003 Rmu_sc0034915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243170 Rroxscaffold_7G00187430
rosa_rugosa	Rorug06G0137300 Rorug06G0137400 Rorug06G0137500 Rorug07G0160700
rosa_samantha	Rh6AG249900 Rh6CG252500 Rh7BG291500 Rh7DG301100
rosa_wichuraiana	Rw6G021600 Rw7G025360 Rw7G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	230
Acc36I	ACCTGC	1 cut(s)	133
Acc65I	GGTACC	1 cut(s)	349
AccB1I	GGYRCC	1 cut(s)	349
AccII	CGCG	3 cut(s)	68, 307, 1111
AclWI	GGATC	3 cut(s)	400, 881, 1348
AcoI	YGGCCR	2 cut(s)	147, 1809
AcsI	RAATTY	5 cut(s)	104, 1299, 1560, 1617, 1654
AcuI	CTGAAG	1 cut(s)	1556
AcvI	CACGTG	1 cut(s)	1433
AfaI	GTAC	5 cut(s)	92, 351, 707, 915, 1371
AgsI	TTSAA	5 cut(s)	109, 400, 1130, 2119, 2150
AjnI	CCWGG	3 cut(s)	800, 1311, 1392
AjuI	GAANNNNNNNTTGG	2 cut(s)	1122, 1154
Alw21I	GWGCWC	1 cut(s)	1887
Alw26I	GTCTC	9 cut(s)	282, 362, 567, 646, 852, 901, 1190, 1809, 2123
AlwI	GGATC	3 cut(s)	400, 881, 1348
AlwNI	CAGNNNCTG	4 cut(s)	83, 622, 1676, 2195
Ama87I	CYCGRG	1 cut(s)	2126
ApoI	RAATTY	5 cut(s)	104, 1299, 1560, 1617, 1654
ArsI	GACNNNNNNTTYG	2 cut(s)	1515, 1547
Asp700I	GAANNNNTTC	1 cut(s)	1947
Asp718I	GGTACC	1 cut(s)	349
AspLEI	GCGC	3 cut(s)	167, 307, 1988
AspS9I	GGNCC	6 cut(s)	716, 782, 1142, 1460, 1499, 1916
AsuC2I	CCSGG	3 cut(s)	1216, 1359, 1527
AsuHPI	GGTGA	9 cut(s)	471, 659, 698, 1331, 1376, 1420, 2011, 2018, 2047
AsuII	TTCGAA	2 cut(s)	1521, 1652
AsuNHI	GCTAGC	1 cut(s)	1166
AvaI	CYCGRG	1 cut(s)	2126
AvaII	GGWCC	3 cut(s)	1460, 1499, 1916
BaeI	ACNNNNGTAYC	2 cut(s)	333, 366
BalI	TGGCCA	2 cut(s)	149, 1811
BanI	GGYRCC	1 cut(s)	349
BbrPI	CACGTG	1 cut(s)	1433
Bbv12I	GWGCWC	1 cut(s)	1887
BccI	CCATC	7 cut(s)	51, 311, 564, 1265, 1373, 1820, 1988
BceAI	ACGGC	2 cut(s)	113, 179
BcgI	CGANNNNNNTGC	4 cut(s)	1848, 1882, 1953, 1987
BciT130I	CCWGG	3 cut(s)	802, 1313, 1394
BcnI	CCSGG	3 cut(s)	1216, 1359, 1527
BcoDI	GTCTC	9 cut(s)	282, 362, 567, 646, 852, 901, 1190, 1809, 2123
BfaI	CTAG	6 cut(s)	209, 1002, 1167, 1206, 1722, 1817
BfmI	CTRYAG	1 cut(s)	614
BfuAI	ACCTGC	1 cut(s)	133
Bme1390I	CCNGG	6 cut(s)	802, 1216, 1313, 1359, 1394, 1527
Bme18I	GGWCC	3 cut(s)	1460, 1499, 1916
BmeT110I	CYCGRG	1 cut(s)	2126
BmgT120I	GGNCC	6 cut(s)	716, 782, 1142, 1460, 1499, 1916
BmiI	GGNNCC	3 cut(s)	193, 351, 424
BmrFI	CCNGG	6 cut(s)	802, 1216, 1313, 1359, 1394, 1527
BmrI	ACTGGG	1 cut(s)	831
BmtI	GCTAGC	1 cut(s)	1170
BmuI	ACTGGG	1 cut(s)	831
BoxI	GACNNNNGTC	1 cut(s)	844
BplI	GAGNNNNNCTC	2 cut(s)	2153, 2185
BpmI	CTGGAG	1 cut(s)	210
Bpu14I	TTCGAA	2 cut(s)	1521, 1652
BpuEI	CTTGAG	2 cut(s)	617, 1643
BpuMI	CCSGG	3 cut(s)	1216, 1359, 1527
BsaAI	YACGTR	1 cut(s)	1433
BsaI	GGTCTC	2 cut(s)	282, 2123
BsaJI	CCNNGG	4 cut(s)	129, 345, 801, 1822
BsaWI	WCCGGW	2 cut(s)	425, 2032
Bse118I	RCCGGY	3 cut(s)	1417, 1462, 1757
Bse1I	ACTGG	4 cut(s)	209, 424, 826, 1454
Bse3DI	GCAATG	3 cut(s)	1473, 1731, 1974
BseBI	CCWGG	3 cut(s)	802, 1313, 1394
BseDI	CCNNGG	4 cut(s)	129, 345, 801, 1822
BseGI	GGATG	7 cut(s)	62, 438, 468, 597, 730, 1450, 1812
BseMI	GCAATG	3 cut(s)	1473, 1731, 1974
BseMII	CTCAG	3 cut(s)	357, 372, 465
BseNI	ACTGG	4 cut(s)	209, 424, 826, 1454
BseRI	GAGGAG	1 cut(s)	716
BseYI	CCCAGC	1 cut(s)	1477
BsgI	GTGCAG	2 cut(s)	1716, 1959
Bsh1236I	CGCG	3 cut(s)	68, 307, 1111
BshNI	GGYRCC	1 cut(s)	349
BsiHKAI	GWGCWC	1 cut(s)	1887
BsiHKCI	CYCGRG	1 cut(s)	2126
BsiSI	CCGG	8 cut(s)	426, 1215, 1359, 1418, 1463, 1527, 1758, 2033
BslFI	GGGAC	3 cut(s)	74, 600, 1031
BsmAI	GTCTC	9 cut(s)	282, 362, 567, 646, 852, 901, 1190, 1809, 2123
BsmBI	CGTCTC	1 cut(s)	901
BsmFI	GGGAC	3 cut(s)	74, 600, 1031
Bso31I	GGTCTC	2 cut(s)	282, 2123
BsoBI	CYCGRG	1 cut(s)	2126
Bsp119I	TTCGAA	2 cut(s)	1521, 1652
Bsp1286I	GDGCHC	1 cut(s)	1887
Bsp1407I	TGTACA	2 cut(s)	90, 913
Bsp143I	GATC	4 cut(s)	392, 886, 1104, 1340
BspCNI	CTCAG	3 cut(s)	358, 373, 466
BspFNI	CGCG	3 cut(s)	68, 307, 1111
BspLI	GGNNCC	3 cut(s)	193, 351, 424
BspMI	ACCTGC	1 cut(s)	133
BspOI	GCTAGC	1 cut(s)	1170
BspPI	GGATC	3 cut(s)	400, 881, 1348
BspT104I	TTCGAA	2 cut(s)	1521, 1652
BspT107I	GGYRCC	1 cut(s)	349
BspTNI	GGTCTC	2 cut(s)	282, 2123
BsrDI	GCAATG	3 cut(s)	1473, 1731, 1974
BsrFI	RCCGGY	3 cut(s)	1417, 1462, 1757
BsrGI	TGTACA	2 cut(s)	90, 913
BsrI	ACTGG	4 cut(s)	209, 424, 826, 1454
BssAI	RCCGGY	3 cut(s)	1417, 1462, 1757
BssECI	CCNNGG	4 cut(s)	129, 345, 801, 1822
BssMI	GATC	4 cut(s)	392, 886, 1104, 1340
BssT1I	CCWWGG	1 cut(s)	345
Bst2UI	CCWGG	3 cut(s)	802, 1313, 1394
Bst4CI	ACNGT	3 cut(s)	172, 544, 1873
Bst6I	CTCTTC	2 cut(s)	241, 1005
BstAPI	GCANNNNNTGC	3 cut(s)	1061, 1490, 2195
BstAUI	TGTACA	2 cut(s)	90, 913
BstBAI	YACGTR	1 cut(s)	1433
BstBI	TTCGAA	2 cut(s)	1521, 1652
BstC8I	GCNNGC	9 cut(s)	859, 1168, 1239, 1539, 1629, 1633, 1759, 2141, 2187
BstDEI	CTNAG	4 cut(s)	254, 366, 381, 474
BstDSI	CCRYGG	1 cut(s)	129
BstEII	GGTNACC	1 cut(s)	340
BstENI	CCTNNNNNAGG	2 cut(s)	789, 1494
BstF5I	GGATG	7 cut(s)	62, 438, 468, 597, 730, 1450, 1812
BstFNI	CGCG	3 cut(s)	68, 307, 1111
BstHHI	GCGC	3 cut(s)	167, 307, 1988
BstKTI	GATC	4 cut(s)	395, 889, 1107, 1343
BstMAI	GTCTC	9 cut(s)	282, 362, 567, 646, 852, 901, 1190, 1809, 2123
BstMBI	GATC	4 cut(s)	392, 886, 1104, 1340
BstMWI	GCNNNNNNNGC	9 cut(s)	29, 74, 961, 1061, 1167, 1490, 1985, 2186, 2195
BstNI	CCWGG	3 cut(s)	802, 1313, 1394
BstNSI	RCATGY	5 cut(s)	857, 979, 1541, 2077, 2143
BstPAI	GACNNNNGTC	1 cut(s)	844
BstPI	GGTNACC	1 cut(s)	340
BstSCI	CCNGG	6 cut(s)	800, 1214, 1311, 1357, 1392, 1525
BstSFI	CTRYAG	1 cut(s)	614
BstUI	CGCG	3 cut(s)	68, 307, 1111
BstX2I	RGATCY	1 cut(s)	1340
BstYI	RGATCY	1 cut(s)	1340
BtgI	CCRYGG	1 cut(s)	129
BtsCI	GGATG	7 cut(s)	62, 438, 468, 597, 730, 1450, 1812
BtsI	GCAGTG	1 cut(s)	916
BtsIMutI	CAGTG	5 cut(s)	732, 916, 988, 1699, 1882
BveI	ACCTGC	1 cut(s)	133
Cac8I	GCNNGC	9 cut(s)	859, 1168, 1239, 1539, 1629, 1633, 1759, 2141, 2187
CaiI	CAGNNNCTG	4 cut(s)	83, 622, 1676, 2195
CfoI	GCGC	3 cut(s)	167, 307, 1988
Cfr10I	RCCGGY	3 cut(s)	1417, 1462, 1757
Cfr13I	GGNCC	6 cut(s)	716, 782, 1142, 1460, 1499, 1916
CseI	GACGC	2 cut(s)	1100, 2080
Csp6I	GTAC	5 cut(s)	91, 350, 706, 914, 1370
CviQI	GTAC	5 cut(s)	91, 350, 706, 914, 1370
DdeI	CTNAG	4 cut(s)	254, 366, 381, 474
DpnI	GATC	4 cut(s)	394, 888, 1106, 1342
DpnII	GATC	4 cut(s)	392, 886, 1104, 1340
DraI	TTTAAA	1 cut(s)	1294
EaeI	YGGCCR	2 cut(s)	147, 1809
Eam1104I	CTCTTC	2 cut(s)	241, 1005
EarI	CTCTTC	2 cut(s)	241, 1005
Eco130I	CCWWGG	1 cut(s)	345
Eco147I	AGGCCT	1 cut(s)	1968
Eco31I	GGTCTC	2 cut(s)	282, 2123
Eco32I	GATATC	1 cut(s)	2011
Eco47I	GGWCC	3 cut(s)	1460, 1499, 1916
Eco57I	CTGAAG	1 cut(s)	1556
Eco72I	CACGTG	1 cut(s)	1433
Eco88I	CYCGRG	1 cut(s)	2126
Eco91I	GGTNACC	1 cut(s)	340
EcoNI	CCTNNNNNAGG	2 cut(s)	789, 1494
EcoO65I	GGTNACC	1 cut(s)	340
EcoRI	GAATTC	2 cut(s)	104, 1560
EcoRII	CCWGG	3 cut(s)	800, 1311, 1392
EcoRV	GATATC	1 cut(s)	2011
EcoT14I	CCWWGG	1 cut(s)	345
EcoT22I	ATGCAT	2 cut(s)	1057, 1861
ErhI	CCWWGG	1 cut(s)	345
Esp3I	CGTCTC	1 cut(s)	901
FaqI	GGGAC	3 cut(s)	74, 600, 1031
FauI	CCCGC	2 cut(s)	384, 1624
FokI	GGATG	7 cut(s)	69, 445, 475, 604, 737, 1437, 1799
FspBI	CTAG	6 cut(s)	209, 1002, 1167, 1206, 1722, 1817
GlaI	GCGC	3 cut(s)	166, 306, 1987
GsaI	CCCAGC	1 cut(s)	1481
GsuI	CTGGAG	1 cut(s)	210
HapII	CCGG	8 cut(s)	426, 1215, 1359, 1418, 1463, 1527, 1758, 2033
HgaI	GACGC	2 cut(s)	1100, 2080
HhaI	GCGC	3 cut(s)	167, 307, 1988
Hin6I	GCGC	3 cut(s)	165, 305, 1986
HinP1I	GCGC	3 cut(s)	165, 305, 1986
HincII	GTYRAC	2 cut(s)	471, 1474
HindII	GTYRAC	2 cut(s)	471, 1474
HinfI	GANTC	7 cut(s)	476, 560, 994, 1096, 1354, 1444, 1530
HpaI	GTTAAC	1 cut(s)	1474
HpaII	CCGG	8 cut(s)	426, 1215, 1359, 1418, 1463, 1527, 1758, 2033
HphI	GGTGA	9 cut(s)	471, 659, 698, 1331, 1376, 1420, 2011, 2018, 2047
Hpy166II	GTNNAC	6 cut(s)	122, 417, 471, 914, 1415, 1474
Hpy188I	TCNGA	6 cut(s)	367, 773, 1060, 1081, 1566, 1826
Hpy188III	TCNNGA	7 cut(s)	189, 849, 1622, 1795, 1999, 2116, 2126
Hpy8I	GTNNAC	6 cut(s)	122, 417, 471, 914, 1415, 1474
Hpy99I	CGWCG	1 cut(s)	1338
HpyAV	CCTTC	8 cut(s)	128, 305, 416, 528, 1034, 1256, 1277, 1758
HpyCH4III	ACNGT	3 cut(s)	172, 544, 1873
HpyCH4IV	ACGT	1 cut(s)	1432
HpyF10VI	GCNNNNNNNGC	9 cut(s)	29, 74, 961, 1061, 1167, 1490, 1985, 2186, 2195
HpyF3I	CTNAG	4 cut(s)	254, 366, 381, 474
HpySE526I	ACGT	1 cut(s)	1432
HspAI	GCGC	3 cut(s)	165, 305, 1986
KpnI	GGTACC	1 cut(s)	353
KroI	GCCGGC	1 cut(s)	1757
KroNI	GCCGGC	1 cut(s)	1759
KspAI	GTTAAC	1 cut(s)	1474
Kzo9I	GATC	4 cut(s)	392, 886, 1104, 1340
LmnI	GCTCC	5 cut(s)	8, 191, 428, 930, 1202
MaeI	CTAG	6 cut(s)	209, 1002, 1167, 1206, 1722, 1817
MaeII	ACGT	1 cut(s)	1432
MaeIII	GTNAC	8 cut(s)	41, 175, 340, 477, 817, 1511, 1699, 2017
MalI	GATC	4 cut(s)	394, 888, 1106, 1342
MboI	GATC	4 cut(s)	392, 886, 1104, 1340
MboII	GAAGA	6 cut(s)	228, 541, 647, 1022, 1381, 1637
MfeI	CAATTG	1 cut(s)	36
MflI	RGATCY	1 cut(s)	1340
MhlI	GDGCHC	1 cut(s)	1887
MlsI	TGGCCA	2 cut(s)	149, 1811
MluCI	AATT	9 cut(s)	36, 104, 711, 1087, 1299, 1560, 1617, 1654, 2206
MluNI	TGGCCA	2 cut(s)	149, 1811
MlyI	GAGTC	4 cut(s)	485, 569, 1105, 1539
MmeI	TCCRAC	3 cut(s)	467, 1438, 1487
Mox20I	TGGCCA	2 cut(s)	149, 1811
Mph1103I	ATGCAT	2 cut(s)	1057, 1861
MroNI	GCCGGC	1 cut(s)	1757
MroXI	GAANNNNTTC	1 cut(s)	1947
MscI	TGGCCA	2 cut(s)	149, 1811
MseI	TTAA	3 cut(s)	1293, 1473, 2209
MslI	CAYNNNNRTG	1 cut(s)	1736
Msp20I	TGGCCA	2 cut(s)	149, 1811
MspA1I	CMGCKG	5 cut(s)	755, 1067, 1237, 1481, 2195
MspI	CCGG	8 cut(s)	426, 1215, 1359, 1418, 1463, 1527, 1758, 2033
MspR9I	CCNGG	6 cut(s)	802, 1216, 1313, 1359, 1394, 1527
MunI	CAATTG	1 cut(s)	36
MvaI	CCWGG	3 cut(s)	802, 1313, 1394
MvnI	CGCG	3 cut(s)	68, 307, 1111
MwoI	GCNNNNNNNGC	9 cut(s)	29, 74, 961, 1061, 1167, 1490, 1985, 2186, 2195
NaeI	GCCGGC	1 cut(s)	1759
NciI	CCSGG	3 cut(s)	1216, 1359, 1527
NdeII	GATC	4 cut(s)	392, 886, 1104, 1340
NgoMIV	GCCGGC	1 cut(s)	1757
NheI	GCTAGC	1 cut(s)	1166
NlaIV	GGNNCC	3 cut(s)	193, 351, 424
NmeAIII	GCCGAG	1 cut(s)	1758
NmuCI	GTSAC	3 cut(s)	477, 1511, 2017
NsiI	ATGCAT	2 cut(s)	1057, 1861
NspI	RCATGY	5 cut(s)	857, 979, 1541, 2077, 2143
NspV	TTCGAA	2 cut(s)	1521, 1652
PaeI	GCATGC	2 cut(s)	1541, 2143
PceI	AGGCCT	1 cut(s)	1968
PdiI	GCCGGC	1 cut(s)	1759
PdmI	GAANNNNTTC	1 cut(s)	1947
PfeI	GAWTC	3 cut(s)	994, 1354, 1444
PflFI	GACNNNGTC	1 cut(s)	475
PleI	GAGTC	4 cut(s)	484, 568, 1104, 1538
PmaCI	CACGTG	1 cut(s)	1433
PmlI	CACGTG	1 cut(s)	1433
PpsI	GAGTC	4 cut(s)	484, 568, 1104, 1538
Ppu21I	YACGTR	1 cut(s)	1433
PshAI	GACNNNNGTC	1 cut(s)	844
PsiI	TTATAA	1 cut(s)	230
Psp6I	CCWGG	3 cut(s)	800, 1311, 1392
PspCI	CACGTG	1 cut(s)	1433
PspEI	GGTNACC	1 cut(s)	340
PspFI	CCCAGC	1 cut(s)	1477
PspGI	CCWGG	3 cut(s)	800, 1311, 1392
PspN4I	GGNNCC	3 cut(s)	193, 351, 424
PspPI	GGNCC	6 cut(s)	716, 782, 1142, 1460, 1499, 1916
PstNI	CAGNNNCTG	4 cut(s)	83, 622, 1676, 2195
PsuI	RGATCY	1 cut(s)	1340
PsyI	GACNNNGTC	1 cut(s)	475
PvuII	CAGCTG	4 cut(s)	1067, 1237, 1481, 2195
RsaI	GTAC	5 cut(s)	92, 351, 707, 915, 1371
RsaNI	GTAC	5 cut(s)	91, 350, 706, 914, 1370
RseI	CAYNNNNRTG	1 cut(s)	1736
SaqAI	TTAA	3 cut(s)	1293, 1473, 2209
Sau3AI	GATC	4 cut(s)	392, 886, 1104, 1340
Sau96I	GGNCC	6 cut(s)	716, 782, 1142, 1460, 1499, 1916
SchI	GAGTC	4 cut(s)	485, 569, 1105, 1539
ScrFI	CCNGG	6 cut(s)	802, 1216, 1313, 1359, 1394, 1527
SduI	GDGCHC	1 cut(s)	1887
SfcI	CTRYAG	1 cut(s)	614
SfuI	TTCGAA	2 cut(s)	1521, 1652
SinI	GGWCC	3 cut(s)	1460, 1499, 1916
SmiMI	CAYNNNNRTG	1 cut(s)	1736
SmlI	CTYRAG	2 cut(s)	596, 1622
SmoI	CTYRAG	2 cut(s)	596, 1622
SphI	GCATGC	2 cut(s)	1541, 2143
Sse9I	AATT	9 cut(s)	36, 104, 711, 1087, 1299, 1560, 1617, 1654, 2206
SseBI	AGGCCT	1 cut(s)	1968
SspMI	CTAG	6 cut(s)	209, 1002, 1167, 1206, 1722, 1817
StuI	AGGCCT	1 cut(s)	1968
StyD4I	CCNGG	6 cut(s)	800, 1214, 1311, 1357, 1392, 1525
StyI	CCWWGG	1 cut(s)	345
TaaI	ACNGT	3 cut(s)	172, 544, 1873
TaiI	ACGT	1 cut(s)	1435
TaqI	TCGA	6 cut(s)	850, 1352, 1521, 1652, 1868, 1963
TasI	AATT	9 cut(s)	36, 104, 711, 1087, 1299, 1560, 1617, 1654, 2206
TatI	WGTACW	3 cut(s)	90, 705, 913
TauI	GCSGC	3 cut(s)	216, 219, 310
TfiI	GAWTC	3 cut(s)	994, 1354, 1444
Tru1I	TTAA	3 cut(s)	1293, 1473, 2209
Tru9I	TTAA	3 cut(s)	1293, 1473, 2209
TscAI	CASTG	5 cut(s)	739, 916, 988, 1699, 1882
TseFI	GTSAC	3 cut(s)	477, 1511, 2017
Tsp45I	GTSAC	3 cut(s)	477, 1511, 2017
TspDTI	ATGAA	1 cut(s)	1457
TspGWI	ACGGA	1 cut(s)	604
TspRI	CASTG	5 cut(s)	739, 916, 988, 1699, 1882
Tth111I	GACNNNGTC	1 cut(s)	475
VpaK11BI	GGWCC	3 cut(s)	1460, 1499, 1916
XagI	CCTNNNNNAGG	2 cut(s)	789, 1494
XapI	RAATTY	5 cut(s)	104, 1299, 1560, 1617, 1654
XceI	RCATGY	5 cut(s)	857, 979, 1541, 2077, 2143
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1744
XmnI	GAANNNNTTC	1 cut(s)	1947
XspI	CTAG	6 cut(s)	209, 1002, 1167, 1206, 1722, 1817
Zsp2I	ATGCAT	2 cut(s)	1057, 1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.