Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001036

Physical Location & Seq

Genomic Coordinates Reverse (-)

27333886 .. 27338830

Gene Structure 4945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG291500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGTCACTCATCGGGGCAACAGTTATTACAACATGCTCAGGAGCCATATCAGATTGGCTTGGTCGGAGGCCAATGCTAATAGCATCATCAGTTCTTTATTTTGTGAGTGGCTTGGTGATGTTGTGGTCACCCAATGTGTATGTACTATGTCTTGGAAGGCTATTAGATGGATTTGGAATTGGTTTAGCAGTTACTCTTGTCCCAGTCTACATATCCGAGACCGCCCCATCAGATATAAGGGGATCGTTGAATACTCTTCCACAGTTCCTTGGTTCAGGAGGCATGTTTTTGTCATATTGTATGGTTTTCGGGATGTCGCTGTTGGCCTCGCCAAGCTGGAGACTGATGCTTGGGATTCTTTCCATTCTCTCTCTTATATATTTTGTATTAACCGTGTTTTACTTACCTGAATCTCCTCGATGGCTTGTGAGTAAGGGCAGGATGCTCGAGGCAAAGAAGGTTCTCCAGAGCTTGCGTGGCACTGAAGATGTTTCTGGTGAGATGGCTTTGCTTGTCGAAGGTCTTGGAGTTGGAGGTGAACCATCTTTAGAAGAGTACATCATAGGCCCAGCTGATGATCTTGATGGTCAGGAAACAGCTGACAAAGACAAAATCAGGTTATATGGACCCGAAGAGGGCCTTTCCTGGGTTGCCAGACCTGTAACTGGGCAGGGTTCTATTGTCAGTCTTGTCTCTCGCCAAGGAAGCATGACAACCCAGAATGTGCCTCTAATGGATCCTCTTGTCACTCTCTTTGGTAGTGTCCATGAAAACTTCCCAGAGGCAGGGAGTACGCGGGGAAGCATGCTCTTTTCTAACTTTGGCAGCATGTTCAGCACAGCAGATCATCCACGGGGTAAAACTGAACAATGGGATGAAGAGAGCTTGCATAGGGAAGGTGAGGACTATGCATCTGGAGGAGACTCAGATGACAATGTGCATAGTCCTTTGATTTCACGCCAGACGACAAGTATGGAAAAGGATATGGTGCCACCTCCTCCTTCCCATGGTAGTATTCTAAGCATGAGGCGCAACAGCAGTCTCATGCAAGGAACTGGGGAGACAGTTGGTAGCACAGGCATTGGTGGTGGGTGGCAGTTGGCATGGAAGTGGTCTGAGAGACAAGGCGAGGATGGAAAGAAGGAAGGAGGATTCCAGAGGGTATATTTGCACCAGGAAGGAGTCCCTGGCTCACGTCGTGGGTCCCTTGTGTCACTTCCTGGTGGTGATGTTCCTGCAGAAGGCGAGTTCATCCAGGCAGCCGCTCTGGTCAGTCAGCCTGCTTTGTATTCGAAGTCACTTATCGATCAGCATCCTGTTGGACCTGCGATGGTTCATCCATCAGAAACAGCTTCGAAAGGACCAATATGGGCTGCTCTGCTTGAACCAGGGATTAAGCACGCATTGTTTGTTGGAATTGGAATCCAGCTTCTTCAGCAGTTTTCTGGGATAAATGGAGTTCTCTATTACACTCCTCAAATTCTTGAAGAGGCTGGAGTCTCAGTTCTTCTTGAAAGCCTTGGTCTCAGTACAACATCTGCATCTTTCCTCATCAGTGCATTCACAACTTTGTTGATGCTTCCTTGTATAGGTCTAGCTATGAAGCTCATGGATATCACTGGTAGAAGGATCCTGCTACTGACTACACTTCCTGTGTTGATTGTGTCACTCATTCTTCTAGTCATTGCCAACTTAGTGACCCTAAGTTCAGTCGTTGAAGCGGCAATATCAACCACTTGTGTGATAATCTATTTCTGCGTCTTTGTCACGGCCTATGGGCCAATCCCAAATATCCTCTGCTCCGAGATCTTTCCGACGAGAGTGCGTGGCCTCTGCATTGCCATCTGTGCCCTGGCATACTGGATTTCAGACATTATCGTCACCTACTCGCTGCCAGTTCTGCTTGATTCAATAGGCCTAGCTGGTATCTTTGGGATTTATGCCGTTGTTTGTGTCATCTCTTTGGTGTTTATCTACTTGAAAGTTCCAGAAACCAAAGGCATGCCCCTTGAAGTCATTACTGAATTCTTTTCTGTTGGTGCAAGACAAATTGCTGCTGCCAAAAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009605 GO:0009607 GO:0009624 GO:0009705 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

690

Amino Acids

74.02

Weight (kDa)

5.05

Isoelectric Point (pI)

39.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	3 - 173	3.7e-44	Sugar (and other) transporter
MFS_1	PF07690	3 - 146	1.9e-16	Major Facilitator Superfamily
Sugar_tr	PF00083	457 - 677	6.4e-39	Sugar (and other) transporter
MFS_1	PF07690	502 - 666	1.6e-09	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300
fragaria_vesca	FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950
malus_domestica	MD05G1139800.v1.1 MD06G1005100.v1.1 MD10G1142100.v1.1
prunus_persica	Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1
pyrus_communis	pycom05g13500 pycom10g12180
rosa_chinensis	RchiOBHm_Chr6g0280981 RchiOBHm_Chr7g0216501
rosa_laevigata	RLG00000002567 RLG00000002578 RLG00000013010
rosa_multiflora	Rmu_sc0000692.1_g000001 Rmu_sc0030247.1_g000002 Rmu_sc0030424.1_g000003 Rmu_sc0034915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243170 Rroxscaffold_7G00187430
rosa_rugosa	Rorug06G0137300 Rorug06G0137400 Rorug06G0137500 Rorug07G0160700
rosa_samantha	Rh6AG249900 Rh6CG252500 Rh7BG291500 Rh7DG301100
rosa_wichuraiana	Rw6G021600 Rw7G025360 Rw7G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1877
Acc36I	ACCTGC	1 cut(s)	1333
AccB1I	GGYRCC	1 cut(s)	988
AccBSI	CCGCTC	1 cut(s)	1265
AccI	GTMKAC	1 cut(s)	207
AccII	CGCG	1 cut(s)	796
AciI	CCGC	4 cut(s)	222, 796, 1263, 1721
AclWI	GGATC	5 cut(s)	250, 731, 744, 1624, 1637
AcsI	RAATTY	2 cut(s)	1479, 2024
AcuI	CTGAAG	2 cut(s)	504, 1418
AdeI	CACNNNGTG	1 cut(s)	1199
AfaI	GTAC	4 cut(s)	144, 557, 793, 1531
AfiI	CCNNNNNNNGG	7 cut(s)	635, 646, 665, 785, 1007, 1241, 1589
AgsI	TTSAA	8 cut(s)	250, 1385, 1487, 1514, 1718, 1911, 1981, 2012
AjiI	CACGTC	1 cut(s)	1196
AjnI	CCWGG	7 cut(s)	644, 1173, 1186, 1219, 1254, 1387, 1851
AleI	CACNNNNGTG	1 cut(s)	1739
AloI	GAACNNNNNNTCC	2 cut(s)	1488, 1520
Alw26I	GTCTC	9 cut(s)	212, 334, 697, 915, 1046, 1055, 1114, 1504, 1529
AlwI	GGATC	5 cut(s)	250, 731, 744, 1624, 1637
Ama87I	CYCGRG	1 cut(s)	446
AoxI	GGCC	8 cut(s)	68, 324, 565, 637, 1770, 1778, 1828, 1915
ApeKI	GCWGC	6 cut(s)	825, 1259, 1373, 1891, 2054, 2057
ApoI	RAATTY	2 cut(s)	1479, 2024
AspLEI	GCGC	1 cut(s)	1032
AspS9I	GGNCC	7 cut(s)	566, 626, 637, 1203, 1322, 1361, 1778
AsuHPI	GGTGA	7 cut(s)	120, 127, 509, 548, 911, 1238, 1873
AsuII	TTCGAA	2 cut(s)	1292, 1355
AvaI	CYCGRG	1 cut(s)	446
AvaII	GGWCC	4 cut(s)	626, 1203, 1322, 1361
BaeGI	GKGCMC	1 cut(s)	1852
BamHI	GGATCC	2 cut(s)	736, 1629
BanI	GGYRCC	1 cut(s)	988
BbvI	GCAGC	6 cut(s)	837, 1271, 1360, 1878, 2041, 2044
BceAI	ACGGC	2 cut(s)	1785, 1928
BcgI	CGANNNNNNTGC	4 cut(s)	427, 461, 1804, 1838
BciT130I	CCWGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
BcoDI	GTCTC	9 cut(s)	212, 334, 697, 915, 1046, 1055, 1114, 1504, 1529
BfaI	CTAG	3 cut(s)	1595, 1679, 1919
BfmI	CTRYAG	1 cut(s)	1236
BfuAI	ACCTGC	1 cut(s)	1333
BglII	AGATCT	1 cut(s)	1806
BisI	GCNGC	8 cut(s)	826, 1260, 1263, 1374, 1722, 1892, 2055, 2058
BlsI	GCNGC	8 cut(s)	827, 1261, 1264, 1375, 1723, 1893, 2056, 2059
Bme1390I	CCNGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
Bme18I	GGWCC	4 cut(s)	626, 1203, 1322, 1361
BmeT110I	CYCGRG	1 cut(s)	446
BmgBI	CACGTC	1 cut(s)	1196
BmgT120I	GGNCC	7 cut(s)	566, 626, 637, 1203, 1322, 1361, 1778
BmiI	GGNNCC	7 cut(s)	43, 628, 738, 990, 1204, 1205, 1631
BmrFI	CCNGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
BmrI	ACTGGG	3 cut(s)	197, 675, 1065
BmsI	GCATC	7 cut(s)	92, 336, 432, 920, 1321, 1550, 1566
BmuI	ACTGGG	3 cut(s)	197, 675, 1065
BpmI	CTGGAG	4 cut(s)	358, 449, 936, 1515
Bpu10I	CCTNAGC	1 cut(s)	37
Bpu14I	TTCGAA	2 cut(s)	1292, 1355
Bsa29I	ATCGAT	1 cut(s)	1305
BsaBI	GATNNNNATC	1 cut(s)	1311
BsaI	GGTCTC	2 cut(s)	212, 1529
BsaJI	CCNNGG	9 cut(s)	268, 645, 700, 851, 1006, 1186, 1388, 1519, 1851
BsaXI	ACNNNNNCTCC	2 cut(s)	1488, 1518
Bsc4I	CCNNNNNNNGG	7 cut(s)	635, 646, 665, 785, 1007, 1241, 1589
Bse1I	ACTGG	6 cut(s)	203, 670, 1060, 1624, 1865, 1895
Bse3DI	GCAATG	2 cut(s)	1683, 1836
Bse8I	GATNNNNATC	1 cut(s)	1311
BseBI	CCWGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
BseCI	ATCGAT	1 cut(s)	1305
BseDI	CCNNGG	9 cut(s)	268, 645, 700, 851, 1006, 1186, 1388, 1519, 1851
BseGI	GGATG	8 cut(s)	318, 447, 847, 880, 1138, 1251, 1312, 1336
BseJI	GATNNNNATC	1 cut(s)	1311
BseLI	CCNNNNNNNGG	7 cut(s)	635, 646, 665, 785, 1007, 1241, 1589
BseMI	GCAATG	2 cut(s)	1683, 1836
BseMII	CTCAG	5 cut(s)	51, 939, 1107, 1515, 1540
BseNI	ACTGG	6 cut(s)	203, 670, 1060, 1624, 1865, 1895
BseRI	GAGGAG	4 cut(s)	405, 933, 987, 1464
BseSI	GKGCMC	1 cut(s)	1852
BseXI	GCAGC	6 cut(s)	837, 1271, 1360, 1878, 2041, 2044
BseYI	CCCAGC	1 cut(s)	568
Bsh1236I	CGCG	1 cut(s)	796
BshFI	GGCC	8 cut(s)	70, 326, 567, 639, 1772, 1780, 1830, 1917
BshNI	GGYRCC	1 cut(s)	988
BshVI	ATCGAT	1 cut(s)	1305
BsiHKCI	CYCGRG	1 cut(s)	446
BslFI	GGGAC	3 cut(s)	185, 1169, 1189
BslI	CCNNNNNNNGG	7 cut(s)	635, 646, 665, 785, 1007, 1241, 1589
BsmAI	GTCTC	9 cut(s)	212, 334, 697, 915, 1046, 1055, 1114, 1504, 1529
BsmFI	GGGAC	3 cut(s)	185, 1169, 1189
BsmI	GAATGC	1 cut(s)	1559
BsnI	GGCC	8 cut(s)	70, 326, 567, 639, 1772, 1780, 1830, 1917
Bso31I	GGTCTC	2 cut(s)	212, 1529
BsoBI	CYCGRG	1 cut(s)	446
Bsp119I	TTCGAA	2 cut(s)	1292, 1355
Bsp1286I	GDGCHC	1 cut(s)	1852
Bsp143I	GATC	7 cut(s)	242, 577, 736, 844, 1306, 1629, 1806
Bsp19I	CCATGG	1 cut(s)	1006
BspACI	CCGC	4 cut(s)	222, 796, 1263, 1721
BspANI	GGCC	8 cut(s)	70, 326, 567, 639, 1772, 1780, 1830, 1917
BspCNI	CTCAG	5 cut(s)	50, 938, 1108, 1514, 1539
BspDI	ATCGAT	1 cut(s)	1305
BspFNI	CGCG	1 cut(s)	796
BspLI	GGNNCC	7 cut(s)	43, 628, 738, 990, 1204, 1205, 1631
BspMAI	CTGCAG	1 cut(s)	1240
BspMI	ACCTGC	1 cut(s)	1333
BspPI	GGATC	5 cut(s)	250, 731, 744, 1624, 1637
BspT104I	TTCGAA	2 cut(s)	1292, 1355
BspT107I	GGYRCC	1 cut(s)	988
BspTNI	GGTCTC	2 cut(s)	212, 1529
BsrBI	CCGCTC	1 cut(s)	1265
BsrDI	GCAATG	2 cut(s)	1683, 1836
BsrI	ACTGG	6 cut(s)	203, 670, 1060, 1624, 1865, 1895
BssECI	CCNNGG	9 cut(s)	268, 645, 700, 851, 1006, 1186, 1388, 1519, 1851
BssMI	GATC	7 cut(s)	242, 577, 736, 844, 1306, 1629, 1806
BssT1I	CCWWGG	4 cut(s)	268, 700, 1006, 1519
Bst2UI	CCWGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
Bst4CI	ACNGT	4 cut(s)	22, 264, 394, 1066
Bst6I	CTCTTC	5 cut(s)	261, 546, 627, 873, 1482
BstBI	TTCGAA	2 cut(s)	1292, 1355
BstC8I	GCNNGC	6 cut(s)	473, 806, 887, 1281, 1401, 2003
BstDEI	CTNAG	8 cut(s)	37, 925, 1019, 1116, 1501, 1526, 1693, 1703
BstDSI	CCRYGG	2 cut(s)	851, 1006
BstEII	GGTNACC	1 cut(s)	126
BstENI	CCTNNNNNAGG	2 cut(s)	1239, 1587
BstF5I	GGATG	8 cut(s)	318, 447, 847, 880, 1138, 1251, 1312, 1336
BstFNI	CGCG	1 cut(s)	796
BstHHI	GCGC	1 cut(s)	1032
BstKTI	GATC	7 cut(s)	245, 580, 739, 847, 1309, 1632, 1809
BstMAI	GTCTC	9 cut(s)	212, 334, 697, 915, 1046, 1055, 1114, 1504, 1529
BstMBI	GATC	7 cut(s)	242, 577, 736, 844, 1306, 1629, 1806
BstMWI	GCNNNNNNNGC	7 cut(s)	477, 705, 834, 1029, 1435, 1847, 1900
BstNI	CCWGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
BstNSI	RCATGY	5 cut(s)	36, 286, 808, 832, 2005
BstPI	GGTNACC	1 cut(s)	126
BstSCI	CCNGG	7 cut(s)	644, 1173, 1186, 1219, 1254, 1387, 1851
BstSFI	CTRYAG	1 cut(s)	1236
BstSLI	GKGCMC	1 cut(s)	1852
BstUI	CGCG	1 cut(s)	796
BstV1I	GCAGC	6 cut(s)	837, 1271, 1360, 1878, 2041, 2044
BstX2I	RGATCY	3 cut(s)	736, 1629, 1806
BstYI	RGATCY	3 cut(s)	736, 1629, 1806
Bsu15I	ATCGAT	1 cut(s)	1305
BsuRI	GGCC	8 cut(s)	70, 326, 567, 639, 1772, 1780, 1830, 1917
BsuTUI	ATCGAT	1 cut(s)	1305
BtgI	CCRYGG	2 cut(s)	851, 1006
BtgZI	GCGATG	1 cut(s)	1343
BtrI	CACGTC	1 cut(s)	1196
BtsCI	GGATG	8 cut(s)	318, 447, 847, 880, 1138, 1251, 1312, 1336
BtsIMutI	CAGTG	3 cut(s)	480, 1561, 1617
BveI	ACCTGC	1 cut(s)	1333
Cac8I	GCNNGC	6 cut(s)	473, 806, 887, 1281, 1401, 2003
CfoI	GCGC	1 cut(s)	1032
Cfr13I	GGNCC	7 cut(s)	566, 626, 637, 1203, 1322, 1361, 1778
ClaI	ATCGAT	1 cut(s)	1305
CseI	GACGC	1 cut(s)	1747
Csp6I	GTAC	4 cut(s)	143, 556, 792, 1530
CviQI	GTAC	4 cut(s)	143, 556, 792, 1530
DdeI	CTNAG	8 cut(s)	37, 925, 1019, 1116, 1501, 1526, 1693, 1703
DpnI	GATC	7 cut(s)	244, 579, 738, 846, 1308, 1631, 1808
DpnII	GATC	7 cut(s)	242, 577, 736, 844, 1306, 1629, 1806
DraIII	CACNNNGTG	1 cut(s)	1199
DrdI	GACNNNNNNGTC	1 cut(s)	1877
DseDI	GACNNNNNNGTC	1 cut(s)	1877
Eam1104I	CTCTTC	5 cut(s)	261, 546, 627, 873, 1482
EarI	CTCTTC	5 cut(s)	261, 546, 627, 873, 1482
Eco130I	CCWWGG	4 cut(s)	268, 700, 1006, 1519
Eco147I	AGGCCT	1 cut(s)	1917
Eco31I	GGTCTC	2 cut(s)	212, 1529
Eco32I	GATATC	1 cut(s)	1615
Eco47I	GGWCC	4 cut(s)	626, 1203, 1322, 1361
Eco57I	CTGAAG	2 cut(s)	504, 1418
Eco88I	CYCGRG	1 cut(s)	446
Eco91I	GGTNACC	1 cut(s)	126
EcoNI	CCTNNNNNAGG	2 cut(s)	1239, 1587
EcoO109I	RGGNCCY	2 cut(s)	637, 1203
EcoO65I	GGTNACC	1 cut(s)	126
EcoRI	GAATTC	1 cut(s)	2024
EcoRII	CCWGG	7 cut(s)	644, 1173, 1186, 1219, 1254, 1387, 1851
EcoRV	GATATC	1 cut(s)	1615
EcoT14I	CCWWGG	4 cut(s)	268, 700, 1006, 1519
EcoT22I	ATGCAT	1 cut(s)	913
ErhI	CCWWGG	4 cut(s)	268, 700, 1006, 1519
FalI	AAGNNNNNCTT	2 cut(s)	624, 656
FaqI	GGGAC	3 cut(s)	185, 1169, 1189
FauI	CCCGC	1 cut(s)	789
FblI	GTMKAC	1 cut(s)	207
Fnu4HI	GCNGC	8 cut(s)	826, 1260, 1263, 1374, 1722, 1892, 2055, 2058
FokI	GGATG	8 cut(s)	325, 454, 834, 887, 1145, 1238, 1299, 1323
Fsp4HI	GCNGC	8 cut(s)	826, 1260, 1263, 1374, 1722, 1892, 2055, 2058
FspBI	CTAG	3 cut(s)	1595, 1679, 1919
GlaI	GCGC	1 cut(s)	1031
GluI	GCNGC	8 cut(s)	826, 1260, 1263, 1374, 1722, 1892, 2055, 2058
GsaI	CCCAGC	1 cut(s)	572
GsuI	CTGGAG	4 cut(s)	358, 449, 936, 1515
HaeIII	GGCC	8 cut(s)	70, 326, 567, 639, 1772, 1780, 1830, 1917
HgaI	GACGC	1 cut(s)	1747
HhaI	GCGC	1 cut(s)	1032
Hin6I	GCGC	1 cut(s)	1030
HinP1I	GCGC	1 cut(s)	1030
HinfI	GANTC	8 cut(s)	355, 410, 923, 1152, 1182, 1422, 1497, 1907
HphI	GGTGA	7 cut(s)	120, 127, 509, 548, 911, 1238, 1873
Hpy166II	GTNNAC	2 cut(s)	208, 539
Hpy8I	GTNNAC	2 cut(s)	208, 539
Hpy99I	CGWCG	2 cut(s)	1200, 1819
HpyCH4III	ACNGT	4 cut(s)	22, 264, 394, 1066
HpyCH4IV	ACGT	1 cut(s)	1195
HpyF10VI	GCNNNNNNNGC	7 cut(s)	477, 705, 834, 1029, 1435, 1847, 1900
HpyF3I	CTNAG	8 cut(s)	37, 925, 1019, 1116, 1501, 1526, 1693, 1703
HpySE526I	ACGT	1 cut(s)	1195
HspAI	GCGC	1 cut(s)	1030
KflI	GGGWCCC	1 cut(s)	1203
Kzo9I	GATC	7 cut(s)	242, 577, 736, 844, 1306, 1629, 1806
LmnI	GCTCC	2 cut(s)	41, 1805
Lsp1109I	GCAGC	6 cut(s)	837, 1271, 1360, 1878, 2041, 2044
LweI	GCATC	7 cut(s)	92, 336, 432, 920, 1321, 1550, 1566
MaeI	CTAG	3 cut(s)	1595, 1679, 1919
MaeII	ACGT	1 cut(s)	1195
MalI	GATC	7 cut(s)	244, 579, 738, 846, 1308, 1631, 1808
MbiI	CCGCTC	1 cut(s)	1265
MboI	GATC	7 cut(s)	242, 577, 736, 844, 1306, 1629, 1806
MboII	GAAGA	9 cut(s)	248, 497, 563, 644, 890, 1424, 1499, 1499, 1667
MflI	RGATCY	3 cut(s)	736, 1629, 1806
MhlI	GDGCHC	1 cut(s)	1852
MluCI	AATT	5 cut(s)	177, 1416, 1479, 2024, 2049
MlyI	GAGTC	3 cut(s)	917, 1191, 1506
MmeI	TCCRAC	5 cut(s)	44, 511, 1300, 1393, 1838
Mph1103I	ATGCAT	1 cut(s)	913
MseI	TTAA	2 cut(s)	389, 1395
MslI	CAYNNNNRTG	2 cut(s)	1108, 1739
MspA1I	CMGCKG	2 cut(s)	572, 599
MspR9I	CCNGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
Mva1269I	GAATGC	1 cut(s)	1559
MvaI	CCWGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
MvnI	CGCG	1 cut(s)	796
MwoI	GCNNNNNNNGC	7 cut(s)	477, 705, 834, 1029, 1435, 1847, 1900
NcoI	CCATGG	1 cut(s)	1006
NdeII	GATC	7 cut(s)	242, 577, 736, 844, 1306, 1629, 1806
NlaIV	GGNNCC	7 cut(s)	43, 628, 738, 990, 1204, 1205, 1631
NmuCI	GTSAC	9 cut(s)	3, 126, 745, 1212, 1296, 1665, 1696, 1765, 1879
NsiI	ATGCAT	1 cut(s)	913
NspI	RCATGY	5 cut(s)	36, 286, 808, 832, 2005
NspV	TTCGAA	2 cut(s)	1292, 1355
OliI	CACNNNNGTG	1 cut(s)	1739
PaeI	GCATGC	2 cut(s)	808, 2005
PaeR7I	CTCGAG	1 cut(s)	446
PceI	AGGCCT	1 cut(s)	1917
PctI	GAATGC	1 cut(s)	1559
PfeI	GAWTC	5 cut(s)	355, 410, 1152, 1422, 1907
PkrI	GCNGC	8 cut(s)	827, 1261, 1264, 1375, 1723, 1893, 2056, 2059
PleI	GAGTC	3 cut(s)	917, 1190, 1505
PpsI	GAGTC	3 cut(s)	917, 1190, 1505
PpuMI	RGGWCCY	1 cut(s)	1203
Psp5II	RGGWCCY	1 cut(s)	1203
Psp6I	CCWGG	7 cut(s)	644, 1173, 1186, 1219, 1254, 1387, 1851
PspEI	GGTNACC	1 cut(s)	126
PspFI	CCCAGC	1 cut(s)	568
PspGI	CCWGG	7 cut(s)	644, 1173, 1186, 1219, 1254, 1387, 1851
PspN4I	GGNNCC	7 cut(s)	43, 628, 738, 990, 1204, 1205, 1631
PspPI	GGNCC	7 cut(s)	566, 626, 637, 1203, 1322, 1361, 1778
PspPPI	RGGWCCY	1 cut(s)	1203
PspXI	VCTCGAGB	1 cut(s)	446
PstI	CTGCAG	1 cut(s)	1240
PsuI	RGATCY	3 cut(s)	736, 1629, 1806
PvuII	CAGCTG	2 cut(s)	572, 599
RsaI	GTAC	4 cut(s)	144, 557, 793, 1531
RsaNI	GTAC	4 cut(s)	143, 556, 792, 1530
RseI	CAYNNNNRTG	2 cut(s)	1108, 1739
SaqAI	TTAA	2 cut(s)	389, 1395
SatI	GCNGC	8 cut(s)	826, 1260, 1263, 1374, 1722, 1892, 2055, 2058
Sau3AI	GATC	7 cut(s)	242, 577, 736, 844, 1306, 1629, 1806
Sau96I	GGNCC	7 cut(s)	566, 626, 637, 1203, 1322, 1361, 1778
SchI	GAGTC	3 cut(s)	917, 1191, 1506
ScrFI	CCNGG	7 cut(s)	646, 1175, 1188, 1221, 1256, 1389, 1853
SduI	GDGCHC	1 cut(s)	1852
SfaNI	GCATC	7 cut(s)	92, 336, 432, 920, 1321, 1550, 1566
SfcI	CTRYAG	1 cut(s)	1236
Sfr274I	CTCGAG	1 cut(s)	446
SfuI	TTCGAA	2 cut(s)	1292, 1355
SinI	GGWCC	4 cut(s)	626, 1203, 1322, 1361
SlaI	CTCGAG	1 cut(s)	446
SmiMI	CAYNNNNRTG	2 cut(s)	1108, 1739
SmlI	CTYRAG	1 cut(s)	446
SmoI	CTYRAG	1 cut(s)	446
SphI	GCATGC	2 cut(s)	808, 2005
Sse9I	AATT	5 cut(s)	177, 1416, 1479, 2024, 2049
SseBI	AGGCCT	1 cut(s)	1917
SsiI	CCGC	4 cut(s)	222, 796, 1263, 1721
SspMI	CTAG	3 cut(s)	1595, 1679, 1919
StuI	AGGCCT	1 cut(s)	1917
StyD4I	CCNGG	7 cut(s)	644, 1173, 1186, 1219, 1254, 1387, 1851
StyI	CCWWGG	4 cut(s)	268, 700, 1006, 1519
TaaI	ACNGT	4 cut(s)	22, 264, 394, 1066
TaiI	ACGT	1 cut(s)	1198
TaqI	TCGA	6 cut(s)	418, 447, 516, 1292, 1305, 1355
TasI	AATT	5 cut(s)	177, 1416, 1479, 2024, 2049
TatI	WGTACW	3 cut(s)	142, 555, 1529
TauI	GCSGC	2 cut(s)	1265, 1724
TfiI	GAWTC	5 cut(s)	355, 410, 1152, 1422, 1907
Tru1I	TTAA	2 cut(s)	389, 1395
Tru9I	TTAA	2 cut(s)	389, 1395
TscAI	CASTG	3 cut(s)	487, 1561, 1624
TseFI	GTSAC	9 cut(s)	3, 126, 745, 1212, 1296, 1665, 1696, 1765, 1879
TseI	GCWGC	6 cut(s)	825, 1259, 1373, 1891, 2054, 2057
Tsp45I	GTSAC	9 cut(s)	3, 126, 745, 1212, 1296, 1665, 1696, 1765, 1879
TspDTI	ATGAA	5 cut(s)	783, 891, 1240, 1325, 1616
TspRI	CASTG	3 cut(s)	487, 1561, 1624
VpaK11BI	GGWCC	4 cut(s)	626, 1203, 1322, 1361
XagI	CCTNNNNNAGG	2 cut(s)	1239, 1587
XapI	RAATTY	2 cut(s)	1479, 2024
XceI	RCATGY	5 cut(s)	36, 286, 808, 832, 2005
XcmI	CCANNNNNNNNNTGG	2 cut(s)	473, 1849
XhoI	CTCGAG	1 cut(s)	446
XmiI	GTMKAC	1 cut(s)	207
XspI	CTAG	3 cut(s)	1595, 1679, 1919
Zsp2I	ATGCAT	1 cut(s)	913

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.