Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001036

Physical Location & Seq

Genomic Coordinates Forward (+)

35729201 .. 35733992

Gene Structure 4792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00243170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGAAGGGAGCTGCGCTTGTGGCTTTTGCTGCTACAATTGGTAACTTTCTACAAGGATGGGACAATGCTACAATTGCTGGAGCTATTGTTTACATCACGGACGATTTTGATTTAAGTAGCTCGGTAGAAGGTCTTGTTGTGGCCATGTCACTCATTGGGGCAACAGTTATTACAACATGCTCAGGAGCCATATCAGATTGGCTTGGTCGGAGGCCAATGCTAATAGCATCATCAGTTCTTTATTTTGTGAGTGGCTTGGTGATGTTGTGGTCACCCAATGTGTATGTACTATGTCTTGCAAGGCTATTAGATGGATTTGGAATTGGTTTAGCGGTTACTCTTGTCCCAGTCTACATATCCGAGACCGCCCCATCAGATATAAGGGGATCGTTGAATACTCTTCCACAGTTCCTTGGTTCAGGAGGCATGTTTTTGTCATATTGTATGGTTTTTGGGATGTCGCTGTTGGCCTCGCCAAGCTGGAGACTGATGCTTGGGATTCTTTCCATTCTCTCTCTTATATATTTTGTATTAACCGTGTTTTACTTACCTGAATCTCCTCGATGGCTTGTGAGTAAGGGCAGGATGCTCGAGGCAAAGAAGGTTCTCCAGAGCTTGCGTGGCACTGAAGATGTTTCTGGTGAGATGGCTTTGCTTGTCGAAGGTCTTGGAGTTGGAGGTGAACCATTTTTAGAAGAGTACATCATAGGCCCAGCTGATGATCTTGATGGTCAGGAAACAGCTGACAAAGACAAAATCAGGTTATATGGACCTGAAGAAGGCCTTTCCTGGGTTGCCAGACCTGTAACTGGGCAGGGTTCCATTGTCAGTCTTGTCTCTCGCCAAGGAAGCCTGGCAACCCAGAATGTGCCTCTAATGGATCCTCTTGTCACTCTCTTTGGTAGTGTCCATGAAAACTTCCCAGAGGCGGGGAGTACGCGGGGAAGCATGCTCTTTTCTAACTTTGGCAGCATGTTCAGCACAGCAGATCATCCACGGGGTAAAACTGAACAATGGGATGAAGAGAGCTTGCATAGGGAAGGTGAGGACTATGCATCTGGAGGAGACTCAGATGACAATGTGCATAGTCCTTTGATTTCACGTCAGACGACAAGTATGGAAAAGGATATGGTGCCACCTCCTCCTTCCCATGGTAGTATTCTAAGCATGAGGCGCAACAGCAGTCTCATGCAAGGAACTGGGGAGACAGTTGGTAGCACAGGCATTGGTGGTGGGTGGCAGTTGGCATGGAAGTGGTCTGAGAGACAAGGTGAGGATGGAAAGAAGGAAGGAGGATTCCAGAGGGTATATTTGCACCAGGAAGGAGTCCCTGGCTCACGTCGTGGGTCCCTTGTGTCACTTCCTGGTGGTGATGTTCCTGCAGAAGGTGAGTTCATCCAGGCAGCCGCTCTGGTCAGTCAGCCTGCTCTGTATTCGAAGTCACTTATCGATCAACATCCTGTTGGCCCTGCAATGGTTCATCCATCAGAAACAGCTTCGAAAGGACCAATATGGGCTGCTCTGCGTGAACCAGGGGTTAAGCACGCATTGTTTGTTGGAATTGGAATCCAGATTCTTCAGCAGTTTTCTGGGATAAATGGAGTTCTCTATTACACTCCTCAAATTCTTGAAGAGGCTGGAGTCTCAGTTCTTCTTGAAAGCTTTGGTCTCAGTACAACATCTGCATCTTTCCTCATCAGTGCATTCACAACTTTGTTGATGCTTCCTTGTATAGGTCTGGCCATGAAGCTCATGGATATCACTGGTAGAAGGATCCTGCTACTGACTACACTTCCTGCGTTGATTGTGTCACTCATTCTTCTAGTCATTGCCAACTTAGTGACCCTAAGTTCAGTCGTTGAAGCCGCAATATCAACCACTTGTGTGATAATCTATTTCTGCGTGTTTGTCACGGCCTATGGGCCAATCCCAAATATCCTCTGCTCCGAGATCTTTCCGACGAGGGTGCGTGGCCTCTGCATTGCCATCTGTGCCCTGGCGTACTGGATTTCAGACATTATCATCACCTACACGCTGCCAGTTCTGCTTGATTCAATAGGCCTAGCTGGTATCTTTGGGATTTATGCCGTTGTTTGTGTCATCTCTTTGGTGTTTATCTACTTGAAAGTTCCAGAAACCAAAGGCATGCCCCTTGAAGTCATTACTGAATTCTTTTCTGTTGGTGCAAGACAAATTGCTGCTGCCAAAAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009605 GO:0009607 GO:0009624 GO:0009705 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

738

Amino Acids

79.0

Weight (kDa)

4.95

Isoelectric Point (pI)

38.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	7 - 220	1.4e-49	Sugar (and other) transporter
MFS_1	PF07690	12 - 194	1e-23	Major Facilitator Superfamily
Sugar_tr	PF00083	508 - 725	1.7e-39	Sugar (and other) transporter
MFS_1	PF07690	550 - 714	5.5e-08	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300
fragaria_vesca	FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950
malus_domestica	MD05G1139800.v1.1 MD06G1005100.v1.1 MD10G1142100.v1.1
prunus_persica	Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1
pyrus_communis	pycom05g13500 pycom10g12180
rosa_chinensis	RchiOBHm_Chr6g0280981 RchiOBHm_Chr7g0216501
rosa_laevigata	RLG00000002567 RLG00000002578 RLG00000013010
rosa_multiflora	Rmu_sc0000692.1_g000001 Rmu_sc0030247.1_g000002 Rmu_sc0030424.1_g000003 Rmu_sc0034915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243170 Rroxscaffold_7G00187430
rosa_rugosa	Rorug06G0137300 Rorug06G0137400 Rorug06G0137500 Rorug07G0160700
rosa_samantha	Rh6AG249900 Rh6CG252500 Rh7BG291500 Rh7DG301100
rosa_wichuraiana	Rw6G021600 Rw7G025360 Rw7G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1132
AccBSI	CCGCTC	1 cut(s)	1409
AccI	GTMKAC	1 cut(s)	351
AccII	CGCG	1 cut(s)	940
AciI	CCGC	6 cut(s)	332, 366, 929, 940, 1407, 1866
AclWI	GGATC	5 cut(s)	394, 875, 888, 1768, 1781
AcoI	YGGCCR	2 cut(s)	141, 1740
AcsI	RAATTY	2 cut(s)	1623, 2168
AcuI	CTGAAG	3 cut(s)	648, 795, 1562
AdeI	CACNNNGTG	1 cut(s)	1343
AfaI	GTAC	5 cut(s)	288, 701, 937, 1675, 2003
AfiI	CCNNNNNNNGG	9 cut(s)	779, 790, 809, 928, 929, 1151, 1385, 1474, 1733
AgsI	TTSAA	7 cut(s)	394, 1631, 1658, 1862, 2055, 2125, 2156
AjiI	CACGTC	2 cut(s)	1103, 1340
AjnI	CCWGG	8 cut(s)	788, 852, 1317, 1330, 1363, 1398, 1531, 1995
AleI	CACNNNNGTG	1 cut(s)	1883
AloI	GAACNNNNNNTCC	2 cut(s)	1632, 1664
Alw26I	GTCTC	9 cut(s)	356, 478, 841, 1059, 1190, 1199, 1258, 1648, 1673
AlwI	GGATC	5 cut(s)	394, 875, 888, 1768, 1781
Ama87I	CYCGRG	1 cut(s)	590
ApeKI	GCWGC	8 cut(s)	11, 29, 969, 1403, 1517, 2035, 2198, 2201
ApoI	RAATTY	2 cut(s)	1623, 2168
AspLEI	GCGC	2 cut(s)	16, 1176
AspS9I	GGNCC	6 cut(s)	710, 770, 1347, 1466, 1505, 1922
AsuHPI	GGTGA	9 cut(s)	264, 271, 653, 692, 1055, 1283, 1382, 1400, 2017
AsuII	TTCGAA	2 cut(s)	1436, 1499
AvaI	CYCGRG	1 cut(s)	590
AvaII	GGWCC	3 cut(s)	770, 1347, 1505
BaeGI	GKGCMC	1 cut(s)	1996
BalI	TGGCCA	2 cut(s)	143, 1742
BamHI	GGATCC	2 cut(s)	880, 1773
BanI	GGYRCC	1 cut(s)	1132
BbvI	GCAGC	7 cut(s)	16, 981, 1415, 1504, 2022, 2185, 2188
BccI	CCATC	9 cut(s)	51, 305, 379, 558, 640, 722, 1271, 1492, 1994
BceAI	ACGGC	2 cut(s)	1929, 2072
BcgI	CGANNNNNNTGC	4 cut(s)	571, 605, 1948, 1982
BciT130I	CCWGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
BcoDI	GTCTC	9 cut(s)	356, 478, 841, 1059, 1190, 1199, 1258, 1648, 1673
BfaI	CTAG	2 cut(s)	1823, 2063
BfmI	CTRYAG	1 cut(s)	1380
BglII	AGATCT	1 cut(s)	1950
Bme1390I	CCNGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
Bme18I	GGWCC	3 cut(s)	770, 1347, 1505
BmeT110I	CYCGRG	1 cut(s)	590
BmgBI	CACGTC	2 cut(s)	1103, 1340
BmgT120I	GGNCC	6 cut(s)	710, 770, 1347, 1466, 1505, 1922
BmiI	GGNNCC	7 cut(s)	187, 820, 882, 1134, 1348, 1349, 1775
BmrFI	CCNGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
BmrI	ACTGGG	3 cut(s)	341, 819, 1209
BmsI	GCATC	6 cut(s)	236, 480, 576, 1064, 1694, 1710
BmuI	ACTGGG	3 cut(s)	341, 819, 1209
BpmI	CTGGAG	5 cut(s)	99, 502, 593, 1080, 1659
Bpu10I	CCTNAGC	1 cut(s)	181
Bpu14I	TTCGAA	2 cut(s)	1436, 1499
Bsa29I	ATCGAT	1 cut(s)	1449
BsaBI	GATNNNNATC	1 cut(s)	1455
BsaI	GGTCTC	2 cut(s)	356, 1673
BsaJI	CCNNGG	8 cut(s)	412, 789, 844, 995, 1150, 1330, 1532, 1995
BsaXI	ACNNNNNCTCC	4 cut(s)	72, 102, 1632, 1662
Bsc4I	CCNNNNNNNGG	9 cut(s)	779, 790, 809, 928, 929, 1151, 1385, 1474, 1733
Bse1I	ACTGG	6 cut(s)	347, 814, 1204, 1768, 2009, 2039
Bse3DI	GCAATG	3 cut(s)	1479, 1827, 1980
Bse8I	GATNNNNATC	1 cut(s)	1455
BseBI	CCWGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
BseCI	ATCGAT	1 cut(s)	1449
BseDI	CCNNGG	8 cut(s)	412, 789, 844, 995, 1150, 1330, 1532, 1995
BseGI	GGATG	9 cut(s)	62, 462, 591, 991, 1024, 1282, 1395, 1456, 1480
BseJI	GATNNNNATC	1 cut(s)	1455
BseLI	CCNNNNNNNGG	9 cut(s)	779, 790, 809, 928, 929, 1151, 1385, 1474, 1733
BseMI	GCAATG	3 cut(s)	1479, 1827, 1980
BseMII	CTCAG	5 cut(s)	195, 1083, 1251, 1659, 1684
BseNI	ACTGG	6 cut(s)	347, 814, 1204, 1768, 2009, 2039
BseRI	GAGGAG	4 cut(s)	549, 1077, 1131, 1608
BseSI	GKGCMC	1 cut(s)	1996
BseXI	GCAGC	7 cut(s)	16, 981, 1415, 1504, 2022, 2185, 2188
BseYI	CCCAGC	1 cut(s)	712
Bsh1236I	CGCG	1 cut(s)	940
BshNI	GGYRCC	1 cut(s)	1132
BshVI	ATCGAT	1 cut(s)	1449
BsiHKCI	CYCGRG	1 cut(s)	590
BslFI	GGGAC	4 cut(s)	74, 329, 1313, 1333
BslI	CCNNNNNNNGG	9 cut(s)	779, 790, 809, 928, 929, 1151, 1385, 1474, 1733
BsmAI	GTCTC	9 cut(s)	356, 478, 841, 1059, 1190, 1199, 1258, 1648, 1673
BsmFI	GGGAC	4 cut(s)	74, 329, 1313, 1333
BsmI	GAATGC	1 cut(s)	1703
Bso31I	GGTCTC	2 cut(s)	356, 1673
BsoBI	CYCGRG	1 cut(s)	590
Bsp119I	TTCGAA	2 cut(s)	1436, 1499
Bsp1286I	GDGCHC	1 cut(s)	1996
Bsp143I	GATC	7 cut(s)	386, 721, 880, 988, 1450, 1773, 1950
Bsp19I	CCATGG	1 cut(s)	1150
BspACI	CCGC	6 cut(s)	332, 366, 929, 940, 1407, 1866
BspCNI	CTCAG	5 cut(s)	194, 1082, 1252, 1658, 1683
BspDI	ATCGAT	1 cut(s)	1449
BspFNI	CGCG	1 cut(s)	940
BspLI	GGNNCC	7 cut(s)	187, 820, 882, 1134, 1348, 1349, 1775
BspMAI	CTGCAG	1 cut(s)	1384
BspPI	GGATC	5 cut(s)	394, 875, 888, 1768, 1781
BspT104I	TTCGAA	2 cut(s)	1436, 1499
BspT107I	GGYRCC	1 cut(s)	1132
BspTNI	GGTCTC	2 cut(s)	356, 1673
BsrBI	CCGCTC	1 cut(s)	1409
BsrDI	GCAATG	3 cut(s)	1479, 1827, 1980
BsrI	ACTGG	6 cut(s)	347, 814, 1204, 1768, 2009, 2039
BssECI	CCNNGG	8 cut(s)	412, 789, 844, 995, 1150, 1330, 1532, 1995
BssMI	GATC	7 cut(s)	386, 721, 880, 988, 1450, 1773, 1950
BssT1I	CCWWGG	3 cut(s)	412, 844, 1150
Bst2UI	CCWGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
Bst4CI	ACNGT	4 cut(s)	166, 408, 538, 1210
Bst6I	CTCTTC	4 cut(s)	405, 690, 1017, 1626
BstBI	TTCGAA	2 cut(s)	1436, 1499
BstC8I	GCNNGC	6 cut(s)	617, 950, 1031, 1425, 1545, 2147
BstDEI	CTNAG	8 cut(s)	181, 1069, 1163, 1260, 1645, 1670, 1837, 1847
BstDSI	CCRYGG	2 cut(s)	995, 1150
BstEII	GGTNACC	1 cut(s)	270
BstENI	CCTNNNNNAGG	3 cut(s)	777, 1383, 1731
BstF5I	GGATG	9 cut(s)	62, 462, 591, 991, 1024, 1282, 1395, 1456, 1480
BstFNI	CGCG	1 cut(s)	940
BstHHI	GCGC	2 cut(s)	16, 1176
BstKTI	GATC	7 cut(s)	389, 724, 883, 991, 1453, 1776, 1953
BstMAI	GTCTC	9 cut(s)	356, 478, 841, 1059, 1190, 1199, 1258, 1648, 1673
BstMBI	GATC	7 cut(s)	386, 721, 880, 988, 1450, 1773, 1950
BstMWI	GCNNNNNNNGC	9 cut(s)	20, 29, 74, 621, 849, 978, 1173, 1991, 2044
BstNI	CCWGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
BstNSI	RCATGY	5 cut(s)	180, 430, 952, 976, 2149
BstPI	GGTNACC	1 cut(s)	270
BstSCI	CCNGG	8 cut(s)	788, 852, 1317, 1330, 1363, 1398, 1531, 1995
BstSFI	CTRYAG	1 cut(s)	1380
BstSLI	GKGCMC	1 cut(s)	1996
BstUI	CGCG	1 cut(s)	940
BstV1I	GCAGC	7 cut(s)	16, 981, 1415, 1504, 2022, 2185, 2188
BstX2I	RGATCY	3 cut(s)	880, 1773, 1950
BstYI	RGATCY	3 cut(s)	880, 1773, 1950
Bsu15I	ATCGAT	1 cut(s)	1449
BsuTUI	ATCGAT	1 cut(s)	1449
BtgI	CCRYGG	2 cut(s)	995, 1150
BtrI	CACGTC	2 cut(s)	1103, 1340
BtsCI	GGATG	9 cut(s)	62, 462, 591, 991, 1024, 1282, 1395, 1456, 1480
BtsIMutI	CAGTG	3 cut(s)	624, 1705, 1761
Cac8I	GCNNGC	6 cut(s)	617, 950, 1031, 1425, 1545, 2147
CfoI	GCGC	2 cut(s)	16, 1176
Cfr13I	GGNCC	6 cut(s)	710, 770, 1347, 1466, 1505, 1922
ClaI	ATCGAT	1 cut(s)	1449
Csp6I	GTAC	5 cut(s)	287, 700, 936, 1674, 2002
CviQI	GTAC	5 cut(s)	287, 700, 936, 1674, 2002
DdeI	CTNAG	8 cut(s)	181, 1069, 1163, 1260, 1645, 1670, 1837, 1847
DpnI	GATC	7 cut(s)	388, 723, 882, 990, 1452, 1775, 1952
DpnII	GATC	7 cut(s)	386, 721, 880, 988, 1450, 1773, 1950
DraIII	CACNNNGTG	1 cut(s)	1343
EaeI	YGGCCR	2 cut(s)	141, 1740
Eam1104I	CTCTTC	4 cut(s)	405, 690, 1017, 1626
EarI	CTCTTC	4 cut(s)	405, 690, 1017, 1626
Eco130I	CCWWGG	3 cut(s)	412, 844, 1150
Eco147I	AGGCCT	2 cut(s)	783, 2061
Eco31I	GGTCTC	2 cut(s)	356, 1673
Eco32I	GATATC	1 cut(s)	1759
Eco47I	GGWCC	3 cut(s)	770, 1347, 1505
Eco57I	CTGAAG	3 cut(s)	648, 795, 1562
Eco88I	CYCGRG	1 cut(s)	590
Eco91I	GGTNACC	1 cut(s)	270
EcoNI	CCTNNNNNAGG	3 cut(s)	777, 1383, 1731
EcoO109I	RGGNCCY	1 cut(s)	1347
EcoO65I	GGTNACC	1 cut(s)	270
EcoRI	GAATTC	1 cut(s)	2168
EcoRII	CCWGG	8 cut(s)	788, 852, 1317, 1330, 1363, 1398, 1531, 1995
EcoRV	GATATC	1 cut(s)	1759
EcoT14I	CCWWGG	3 cut(s)	412, 844, 1150
EcoT22I	ATGCAT	1 cut(s)	1057
ErhI	CCWWGG	3 cut(s)	412, 844, 1150
FalI	AAGNNNNNCTT	2 cut(s)	768, 800
FaqI	GGGAC	4 cut(s)	74, 329, 1313, 1333
FauI	CCCGC	2 cut(s)	922, 933
FblI	GTMKAC	1 cut(s)	351
FokI	GGATG	9 cut(s)	69, 469, 598, 978, 1031, 1289, 1382, 1443, 1467
FspBI	CTAG	2 cut(s)	1823, 2063
GlaI	GCGC	2 cut(s)	15, 1175
GsaI	CCCAGC	1 cut(s)	716
GsuI	CTGGAG	5 cut(s)	99, 502, 593, 1080, 1659
HhaI	GCGC	2 cut(s)	16, 1176
Hin6I	GCGC	2 cut(s)	14, 1174
HinP1I	GCGC	2 cut(s)	14, 1174
HindIII	AAGCTT	1 cut(s)	1660
HinfI	GANTC	9 cut(s)	499, 554, 1067, 1296, 1326, 1566, 1573, 1641, 2051
HphI	GGTGA	9 cut(s)	264, 271, 653, 692, 1055, 1283, 1382, 1400, 2017
Hpy166II	GTNNAC	4 cut(s)	91, 352, 683, 1529
Hpy8I	GTNNAC	4 cut(s)	91, 352, 683, 1529
Hpy99I	CGWCG	2 cut(s)	1344, 1963
HpyCH4III	ACNGT	4 cut(s)	166, 408, 538, 1210
HpyCH4IV	ACGT	2 cut(s)	1102, 1339
HpyF10VI	GCNNNNNNNGC	9 cut(s)	20, 29, 74, 621, 849, 978, 1173, 1991, 2044
HpyF3I	CTNAG	8 cut(s)	181, 1069, 1163, 1260, 1645, 1670, 1837, 1847
HpySE526I	ACGT	2 cut(s)	1102, 1339
HspAI	GCGC	2 cut(s)	14, 1174
KflI	GGGWCCC	1 cut(s)	1347
Kzo9I	GATC	7 cut(s)	386, 721, 880, 988, 1450, 1773, 1950
LmnI	GCTCC	4 cut(s)	8, 80, 185, 1949
Lsp1109I	GCAGC	7 cut(s)	16, 981, 1415, 1504, 2022, 2185, 2188
LweI	GCATC	6 cut(s)	236, 480, 576, 1064, 1694, 1710
MaeI	CTAG	2 cut(s)	1823, 2063
MaeII	ACGT	2 cut(s)	1102, 1339
MalI	GATC	7 cut(s)	388, 723, 882, 990, 1452, 1775, 1952
MbiI	CCGCTC	1 cut(s)	1409
MboI	GATC	7 cut(s)	386, 721, 880, 988, 1450, 1773, 1950
MboII	GAAGA	9 cut(s)	392, 641, 707, 788, 1034, 1568, 1643, 1643, 1811
MfeI	CAATTG	2 cut(s)	36, 72
MflI	RGATCY	3 cut(s)	880, 1773, 1950
MhlI	GDGCHC	1 cut(s)	1996
MlsI	TGGCCA	2 cut(s)	143, 1742
MluCI	AATT	7 cut(s)	36, 72, 321, 1560, 1623, 2168, 2193
MluNI	TGGCCA	2 cut(s)	143, 1742
MlyI	GAGTC	3 cut(s)	1061, 1335, 1650
MmeI	TCCRAC	4 cut(s)	188, 655, 1537, 1982
Mox20I	TGGCCA	2 cut(s)	143, 1742
Mph1103I	ATGCAT	1 cut(s)	1057
MscI	TGGCCA	2 cut(s)	143, 1742
MseI	TTAA	3 cut(s)	113, 533, 1539
MslI	CAYNNNNRTG	2 cut(s)	1252, 1883
Msp20I	TGGCCA	2 cut(s)	143, 1742
MspA1I	CMGCKG	2 cut(s)	716, 743
MspR9I	CCNGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
MunI	CAATTG	2 cut(s)	36, 72
Mva1269I	GAATGC	1 cut(s)	1703
MvaI	CCWGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
MvnI	CGCG	1 cut(s)	940
MwoI	GCNNNNNNNGC	9 cut(s)	20, 29, 74, 621, 849, 978, 1173, 1991, 2044
NcoI	CCATGG	1 cut(s)	1150
NdeII	GATC	7 cut(s)	386, 721, 880, 988, 1450, 1773, 1950
NlaIV	GGNNCC	7 cut(s)	187, 820, 882, 1134, 1348, 1349, 1775
NmuCI	GTSAC	8 cut(s)	147, 270, 889, 1356, 1440, 1809, 1840, 1909
NsiI	ATGCAT	1 cut(s)	1057
NspI	RCATGY	5 cut(s)	180, 430, 952, 976, 2149
NspV	TTCGAA	2 cut(s)	1436, 1499
OliI	CACNNNNGTG	1 cut(s)	1883
PaeI	GCATGC	2 cut(s)	952, 2149
PaeR7I	CTCGAG	1 cut(s)	590
PceI	AGGCCT	2 cut(s)	783, 2061
PctI	GAATGC	1 cut(s)	1703
PfeI	GAWTC	6 cut(s)	499, 554, 1296, 1566, 1573, 2051
PleI	GAGTC	3 cut(s)	1061, 1334, 1649
PpsI	GAGTC	3 cut(s)	1061, 1334, 1649
PpuMI	RGGWCCY	1 cut(s)	1347
Psp5II	RGGWCCY	1 cut(s)	1347
Psp6I	CCWGG	8 cut(s)	788, 852, 1317, 1330, 1363, 1398, 1531, 1995
PspEI	GGTNACC	1 cut(s)	270
PspFI	CCCAGC	1 cut(s)	712
PspGI	CCWGG	8 cut(s)	788, 852, 1317, 1330, 1363, 1398, 1531, 1995
PspN4I	GGNNCC	7 cut(s)	187, 820, 882, 1134, 1348, 1349, 1775
PspPI	GGNCC	6 cut(s)	710, 770, 1347, 1466, 1505, 1922
PspPPI	RGGWCCY	1 cut(s)	1347
PspXI	VCTCGAGB	1 cut(s)	590
PstI	CTGCAG	1 cut(s)	1384
PsuI	RGATCY	3 cut(s)	880, 1773, 1950
PvuII	CAGCTG	2 cut(s)	716, 743
RsaI	GTAC	5 cut(s)	288, 701, 937, 1675, 2003
RsaNI	GTAC	5 cut(s)	287, 700, 936, 1674, 2002
RseI	CAYNNNNRTG	2 cut(s)	1252, 1883
SaqAI	TTAA	3 cut(s)	113, 533, 1539
Sau3AI	GATC	7 cut(s)	386, 721, 880, 988, 1450, 1773, 1950
Sau96I	GGNCC	6 cut(s)	710, 770, 1347, 1466, 1505, 1922
SchI	GAGTC	3 cut(s)	1061, 1335, 1650
ScrFI	CCNGG	8 cut(s)	790, 854, 1319, 1332, 1365, 1400, 1533, 1997
SduI	GDGCHC	1 cut(s)	1996
SfaNI	GCATC	6 cut(s)	236, 480, 576, 1064, 1694, 1710
SfcI	CTRYAG	1 cut(s)	1380
Sfr274I	CTCGAG	1 cut(s)	590
SfuI	TTCGAA	2 cut(s)	1436, 1499
SinI	GGWCC	3 cut(s)	770, 1347, 1505
SlaI	CTCGAG	1 cut(s)	590
SmiMI	CAYNNNNRTG	2 cut(s)	1252, 1883
SmlI	CTYRAG	1 cut(s)	590
SmoI	CTYRAG	1 cut(s)	590
SphI	GCATGC	2 cut(s)	952, 2149
Sse9I	AATT	7 cut(s)	36, 72, 321, 1560, 1623, 2168, 2193
SseBI	AGGCCT	2 cut(s)	783, 2061
SsiI	CCGC	6 cut(s)	332, 366, 929, 940, 1407, 1866
SspMI	CTAG	2 cut(s)	1823, 2063
StuI	AGGCCT	2 cut(s)	783, 2061
StyD4I	CCNGG	8 cut(s)	788, 852, 1317, 1330, 1363, 1398, 1531, 1995
StyI	CCWWGG	3 cut(s)	412, 844, 1150
TaaI	ACNGT	4 cut(s)	166, 408, 538, 1210
TaiI	ACGT	2 cut(s)	1105, 1342
TaqI	TCGA	6 cut(s)	562, 591, 660, 1436, 1449, 1499
TasI	AATT	7 cut(s)	36, 72, 321, 1560, 1623, 2168, 2193
TatI	WGTACW	3 cut(s)	286, 699, 1673
TauI	GCSGC	2 cut(s)	1409, 1868
TfiI	GAWTC	6 cut(s)	499, 554, 1296, 1566, 1573, 2051
Tru1I	TTAA	3 cut(s)	113, 533, 1539
Tru9I	TTAA	3 cut(s)	113, 533, 1539
TscAI	CASTG	3 cut(s)	631, 1705, 1768
TseFI	GTSAC	8 cut(s)	147, 270, 889, 1356, 1440, 1809, 1840, 1909
TseI	GCWGC	8 cut(s)	11, 29, 969, 1403, 1517, 2035, 2198, 2201
Tsp45I	GTSAC	8 cut(s)	147, 270, 889, 1356, 1440, 1809, 1840, 1909
TspDTI	ATGAA	6 cut(s)	17, 927, 1035, 1384, 1469, 1760
TspGWI	ACGGA	1 cut(s)	113
TspRI	CASTG	3 cut(s)	631, 1705, 1768
VpaK11BI	GGWCC	3 cut(s)	770, 1347, 1505
XagI	CCTNNNNNAGG	3 cut(s)	777, 1383, 1731
XapI	RAATTY	2 cut(s)	1623, 2168
XceI	RCATGY	5 cut(s)	180, 430, 952, 976, 2149
XcmI	CCANNNNNNNNNTGG	3 cut(s)	617, 1750, 1993
XhoI	CTCGAG	1 cut(s)	590
XmiI	GTMKAC	1 cut(s)	351
XspI	CTAG	2 cut(s)	1823, 2063
Zsp2I	ATGCAT	1 cut(s)	1057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.