Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0001036

Physical Location & Seq

Genomic Coordinates Reverse (-)

15745597 .. 15748827

Gene Structure 3231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g12180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGAGTGGAGCTGTTCTTGTTGCCGTTGCTGCTGCAATTGGTAACCTGTTGCAGGGATGGGACAACGCTACTATCGCAGCTTCTGTTTTGTACATAAAGAGGGAATTCAACTTGGAAAGCGAACCAGCTATGGAAGGGCTGATCGTGGCCATGTCGCTTATCGGGGCAACTGTGGTTACATTTTGTTCTGGAGCTGTAGCAGACTGGCTAGGCCGCCGTCCTACGCTGATAGTCTCTTCTGTCCTTTACTTTCTTAGTGGTCTTGTAATGCTGTGGTCTCCCAATGTTTATATCCTTCTCTTGGCACGGCTTTTCGATGGATTTGGAATCGGTTTGGCGGTTACCTTGGTTCCGCTTTATATATCTGAGACAGCCCCGCCTGAAATAAGGGGATCGTTGAATACCCTTCCGCAGTTTCTTGGCTCTGGTGGGATGTTCTTGTCATATTGCATGGTTTTTGGGATGTCGTTGACAGAGTCCGCAAGTTGGAGGTTGATGCTTGGGATTCTCTCTTTTCCTTCTCTTGTTTATTTTATATTGACTGTGTTCTTCTTGCCCGAGTCTCCACGATGGCTTGTGAGTAAGGGACGGATGCTTGAGGCTAAGCAAGTTTTGCAGAGGCTACGTGGCAGAGAAGATGTCGCTGGTGAGATGGCTTTACTTGTTGAGGGTCTTGGAGTTGGGGGTGAAACGTATTTTGAGGAGTACATAATTGGCCCAGCAGACGACTCCGCTGATGACCACGATTTATCTGCTGAAAAGGATGAAATCAGATTATATGGGCCTGAACAAGGACAATCCTGGGTTGCCAAACCTGTCACCAGGCAAAGCACTCTTGGACTTGTGTCTCGACATGCAAGCATGGTAAATCAAAGTGGGCTTGTTGATCCTCTGGTCTCGCTCTTTGGCAGTATACATGAGAAGCTCCCCGACACAGGAAGCAAGGGAAGTATGCTTTTTCCGCACTTTGGCAGCATGTTTAGCGTGGGAGGGAATCAGCTTAGACATGAAGAGTGGGACGAGGAGAGTGTTGCCAGAGAAGGAGAGGGTTATGCATCTGATGCAGCCGGAGGTGATTCCGATGACAATTTGCACAGTCCATTGATCTCGCGTCAGACAACAAGCATTGAAAAGAACGTGGGCCCACCTCCCCAGGGAAGCCTTGCTGGCATGAGAAACGGCAGTCTCATTGGTGGAGAGGGAGCTAGTAGCACCGATATTGGTGGCGGTTGGCAGCTGGCGTGGAAATGGTCTGAGAGAGAAGGCCAAGATGGACACAAGGAAGGAGGGTTTAAAAGAATTTATTTGCACCAGGAGGGTGTCCCCGCATCTCGCCATGGATCTATTGTTTCGATACCTGGTGGTGATGCACCGAACGACGGTGAGTTCATCCAGGCTGCTGCTTTGGTGAGCGAATCGGCTCTGTACTCACGTGAACTTATGAATCAGCATCCAGTTGGACCGGCAATGGTTAACCCAGCTGCAACTTCTGCAAAAGGGCCAAGTTGGAGAGATCTTTTTGAACCCGGAGTGAAGCATGCCTTGGCTGTTGGGGTGGGAATGCAGATACTTCAGCAGTTTTCCGGTATAAGTGGGGTTCTCTACTACACGCCTCAAATTCTTGAGCAGGCGGGCGTTGGCATCCTTCTTTCGAACTTGGGCATTAGTTCAGCTTCTTCGTCTCTGCTTATCAGTGCAGTGACAACCTTGCTGATGCTTCCTAGTATAGCCATTGCCATGAGGCTCATGGATATAGCCGGCAGAAGGAGCTTGCTGCTCGGCACAATCCCTGTCTTGATAGTGTCTCTCGTCATCCTAGTCCTCGGAAGTCTTGTGAATATGGGCAGTGTTGTAAATGCATCAGTTTCGACTGTCAGCGTTGTGCTCTACTTCTGTTTCTTTGTTATGGGGTTTGGTCCAATCCCCAACATACTCTGTGCAGAAATCTTCCCCACCAGAGTTCGAGGCCTCTGCATTGCCATCTGCGCCCTCACGTTTTGGATTGGCGACATCATTGTCACCTACTCACTTCCAGTGATGCTCAAATCTGTTGGCCTTGCTGGTGTCTTTGGCATGTATGCAGTTGTGTCCGTCATAGCGTTTATCTTCATTTTCTTGAAAGTTCCGGAGACCAAAGGTATGCCCCTTGAAGTGATTACCGAGTTTTTCTCTGTTGGTGCGAAGCAGGCTTCAGCTGCCAAGAGCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

737

Amino Acids

78.41

Weight (kDa)

5.15

Isoelectric Point (pI)

41.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	7 - 222	1.2e-52	Sugar (and other) transporter
MFS_1	PF07690	12 - 195	2.5e-20	Major Facilitator Superfamily
Sugar_tr	PF00083	496 - 723	4e-41	Sugar (and other) transporter
MFS_1	PF07690	548 - 712	1.5e-09	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300
fragaria_vesca	FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950
malus_domestica	MD05G1139800.v1.1 MD06G1005100.v1.1 MD10G1142100.v1.1
prunus_persica	Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1
pyrus_communis	pycom05g13500 pycom10g12180
rosa_chinensis	RchiOBHm_Chr6g0280981 RchiOBHm_Chr7g0216501
rosa_laevigata	RLG00000002567 RLG00000002578 RLG00000013010
rosa_multiflora	Rmu_sc0000692.1_g000001 Rmu_sc0030247.1_g000002 Rmu_sc0030424.1_g000003 Rmu_sc0034915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243170 Rroxscaffold_7G00187430
rosa_rugosa	Rorug06G0137300 Rorug06G0137400 Rorug06G0137500 Rorug07G0160700
rosa_samantha	Rh6AG249900 Rh6CG252500 Rh7BG291500 Rh7DG301100
rosa_wichuraiana	Rw6G021600 Rw7G025360 Rw7G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2015
AccI	GTMKAC	1 cut(s)	913
AccII	CGCG	1 cut(s)	1111
AccIII	TCCGGA	1 cut(s)	2125
AclWI	GGATC	3 cut(s)	400, 881, 1348
AcoI	YGGCCR	1 cut(s)	147
AcsI	RAATTY	3 cut(s)	104, 1299, 1617
AcuI	CTGAAG	2 cut(s)	1556, 2175
AcvI	CACGTG	1 cut(s)	1433
AfaI	GTAC	3 cut(s)	92, 707, 1427
AfiI	CCNNNNNNNGG	9 cut(s)	52, 301, 486, 791, 935, 968, 1154, 1379, 1764
AgsI	TTSAA	6 cut(s)	109, 400, 1130, 1523, 2119, 2150
AjnI	CCWGG	6 cut(s)	800, 821, 1152, 1311, 1357, 1392
AjuI	GAANNNNNNNTTGG	2 cut(s)	1526, 1558
Alw21I	GWGCWC	1 cut(s)	1887
AlwI	GGATC	3 cut(s)	400, 881, 1348
AlwNI	CAGNNNCTG	1 cut(s)	83
Ama87I	CYCGRG	1 cut(s)	557
Aor13HI	TCCGGA	1 cut(s)	2125
AoxI	GGCC	9 cut(s)	147, 211, 715, 782, 1141, 1264, 1499, 1966, 2053
ApaI	GGGCCC	1 cut(s)	1145
ApoI	RAATTY	3 cut(s)	104, 1299, 1617
AspLEI	GCGC	1 cut(s)	1988
AspS9I	GGNCC	7 cut(s)	716, 782, 1141, 1142, 1460, 1499, 1916
AsuC2I	CCSGG	1 cut(s)	1527
AsuHPI	GGTGA	8 cut(s)	659, 698, 811, 1085, 1376, 1394, 1420, 2011
AsuII	TTCGAA	1 cut(s)	1652
AvaI	CYCGRG	1 cut(s)	557
AvaII	GGWCC	2 cut(s)	1460, 1916
BaeGI	GKGCMC	1 cut(s)	1145
BalI	TGGCCA	1 cut(s)	149
BanII	GRGCYC	1 cut(s)	1145
BbrPI	CACGTG	1 cut(s)	1433
Bbv12I	GWGCWC	1 cut(s)	1887
BccI	CCATC	6 cut(s)	51, 311, 564, 646, 1265, 1988
BceAI	ACGGC	4 cut(s)	8, 201, 323, 1195
BcgI	CGANNNNNNTGC	6 cut(s)	734, 768, 1848, 1882, 1953, 1987
BciT130I	CCWGG	6 cut(s)	802, 823, 1154, 1313, 1359, 1394
BcnI	CCSGG	1 cut(s)	1527
BfaI	CTAG	4 cut(s)	209, 1206, 1722, 1817
BfmI	CTRYAG	1 cut(s)	195
BglI	GCCNNNNNGGC	1 cut(s)	1167
BglII	AGATCT	1 cut(s)	1513
BlpI	GCTNAGC	1 cut(s)	603
Bme1390I	CCNGG	7 cut(s)	802, 823, 1154, 1313, 1359, 1394, 1527
Bme18I	GGWCC	2 cut(s)	1460, 1916
BmeT110I	CYCGRG	1 cut(s)	557
BmgT120I	GGNCC	7 cut(s)	716, 782, 1141, 1142, 1460, 1499, 1916
BmiI	GGNNCC	2 cut(s)	351, 1143
BmrFI	CCNGG	7 cut(s)	802, 823, 1154, 1313, 1359, 1394, 1527
BoxI	GACNNNNGTC	1 cut(s)	844
BplI	GAGNNNNNCTC	2 cut(s)	2153, 2185
BpmI	CTGGAG	1 cut(s)	210
Bpu1102I	GCTNAGC	1 cut(s)	603
Bpu14I	TTCGAA	1 cut(s)	1652
BpuEI	CTTGAG	2 cut(s)	617, 1643
BpuMI	CCSGG	1 cut(s)	1527
BsaAI	YACGTR	2 cut(s)	626, 1433
BsaI	GGTCTC	3 cut(s)	282, 901, 2123
BsaJI	CCNNGG	7 cut(s)	345, 801, 1152, 1153, 1336, 1542, 1822
BsaWI	WCCGGW	2 cut(s)	1583, 2125
Bsc4I	CCNNNNNNNGG	9 cut(s)	52, 301, 486, 791, 935, 968, 1154, 1379, 1764
Bse118I	RCCGGY	2 cut(s)	1462, 1757
Bse1I	ACTGG	3 cut(s)	209, 1454, 2033
Bse3DI	GCAATG	3 cut(s)	1473, 1731, 1974
BseAI	TCCGGA	1 cut(s)	2125
BseBI	CCWGG	6 cut(s)	802, 823, 1154, 1313, 1359, 1394
BseDI	CCNNGG	7 cut(s)	345, 801, 1152, 1153, 1336, 1542, 1822
BseGI	GGATG	9 cut(s)	62, 438, 468, 597, 769, 1389, 1450, 1641, 1812
BseLI	CCNNNNNNNGG	9 cut(s)	52, 301, 486, 791, 935, 968, 1154, 1379, 1764
BseMI	GCAATG	3 cut(s)	1473, 1731, 1974
BseMII	CTCAG	2 cut(s)	357, 1245
BseNI	ACTGG	3 cut(s)	209, 1454, 2033
BseRI	GAGGAG	2 cut(s)	716, 1037
BseSI	GKGCMC	1 cut(s)	1145
BseYI	CCCAGC	2 cut(s)	718, 1477
BsgI	GTGCAG	2 cut(s)	1716, 1959
Bsh1236I	CGCG	1 cut(s)	1111
BshFI	GGCC	9 cut(s)	149, 213, 717, 784, 1143, 1266, 1501, 1968, 2055
BsiHKAI	GWGCWC	1 cut(s)	1887
BsiHKCI	CYCGRG	1 cut(s)	557
BsiSI	CCGG	6 cut(s)	1068, 1463, 1527, 1584, 1758, 2126
BslFI	GGGAC	4 cut(s)	74, 600, 1031, 1307
BslI	CCNNNNNNNGG	9 cut(s)	52, 301, 486, 791, 935, 968, 1154, 1379, 1764
BsmBI	CGTCTC	1 cut(s)	1686
BsmFI	GGGAC	4 cut(s)	74, 600, 1031, 1307
BsmI	GAATGC	1 cut(s)	1566
BsnI	GGCC	9 cut(s)	149, 213, 717, 784, 1143, 1266, 1501, 1968, 2055
Bso31I	GGTCTC	3 cut(s)	282, 901, 2123
BsoBI	CYCGRG	1 cut(s)	557
Bsp119I	TTCGAA	1 cut(s)	1652
Bsp120I	GGGCCC	1 cut(s)	1141
Bsp1286I	GDGCHC	2 cut(s)	1145, 1887
Bsp13I	TCCGGA	1 cut(s)	2125
Bsp1407I	TGTACA	1 cut(s)	90
Bsp143I	GATC	6 cut(s)	141, 392, 886, 1104, 1340, 1513
Bsp1720I	GCTNAGC	1 cut(s)	603
Bsp19I	CCATGG	1 cut(s)	1336
BspANI	GGCC	9 cut(s)	149, 213, 717, 784, 1143, 1266, 1501, 1968, 2055
BspCNI	CTCAG	2 cut(s)	358, 1246
BspEI	TCCGGA	1 cut(s)	2125
BspFNI	CGCG	1 cut(s)	1111
BspLI	GGNNCC	2 cut(s)	351, 1143
BspPI	GGATC	3 cut(s)	400, 881, 1348
BspT104I	TTCGAA	1 cut(s)	1652
BspTNI	GGTCTC	3 cut(s)	282, 901, 2123
BsrDI	GCAATG	3 cut(s)	1473, 1731, 1974
BsrFI	RCCGGY	2 cut(s)	1462, 1757
BsrGI	TGTACA	1 cut(s)	90
BsrI	ACTGG	3 cut(s)	209, 1454, 2033
BssAI	RCCGGY	2 cut(s)	1462, 1757
BssECI	CCNNGG	7 cut(s)	345, 801, 1152, 1153, 1336, 1542, 1822
BssMI	GATC	6 cut(s)	141, 392, 886, 1104, 1340, 1513
BssNAI	GTATAC	1 cut(s)	914
BssT1I	CCWWGG	3 cut(s)	345, 1336, 1542
Bst1107I	GTATAC	1 cut(s)	914
Bst2UI	CCWGG	6 cut(s)	802, 823, 1154, 1313, 1359, 1394
Bst4CI	ACNGT	5 cut(s)	172, 544, 1097, 1382, 1873
Bst6I	CTCTTC	2 cut(s)	241, 1005
BstAPI	GCANNNNNTGC	3 cut(s)	613, 1061, 1490
BstAUI	TGTACA	1 cut(s)	90
BstBAI	YACGTR	2 cut(s)	626, 1433
BstBI	TTCGAA	1 cut(s)	1652
BstC8I	GCNNGC	9 cut(s)	859, 1168, 1239, 1539, 1629, 1633, 1759, 1772, 2187
BstDEI	CTNAG	5 cut(s)	254, 366, 603, 1001, 1254
BstDSI	CCRYGG	1 cut(s)	1336
BstEII	GGTNACC	2 cut(s)	41, 340
BstENI	CCTNNNNNAGG	2 cut(s)	50, 789
BstF5I	GGATG	9 cut(s)	62, 438, 468, 597, 769, 1389, 1450, 1641, 1812
BstFNI	CGCG	1 cut(s)	1111
BstHHI	GCGC	1 cut(s)	1988
BstKTI	GATC	6 cut(s)	144, 395, 889, 1107, 1343, 1516
BstMBI	GATC	6 cut(s)	141, 392, 886, 1104, 1340, 1513
BstNI	CCWGG	6 cut(s)	802, 823, 1154, 1313, 1359, 1394
BstNSI	RCATGY	4 cut(s)	857, 979, 1541, 2077
BstPAI	GACNNNNGTC	1 cut(s)	844
BstPI	GGTNACC	2 cut(s)	41, 340
BstSCI	CCNGG	7 cut(s)	800, 821, 1152, 1311, 1357, 1392, 1525
BstSFI	CTRYAG	1 cut(s)	195
BstSLI	GKGCMC	1 cut(s)	1145
BstUI	CGCG	1 cut(s)	1111
BstX2I	RGATCY	2 cut(s)	1340, 1513
BstYI	RGATCY	2 cut(s)	1340, 1513
BstZ17I	GTATAC	1 cut(s)	914
BsuRI	GGCC	9 cut(s)	149, 213, 717, 784, 1143, 1266, 1501, 1968, 2055
BtgI	CCRYGG	1 cut(s)	1336
BtsCI	GGATG	9 cut(s)	62, 438, 468, 597, 769, 1389, 1450, 1641, 1812
BtsI	GCAGTG	2 cut(s)	1704, 1852
BtsIMutI	CAGTG	4 cut(s)	1699, 1704, 1852, 2040
Cac8I	GCNNGC	9 cut(s)	859, 1168, 1239, 1539, 1629, 1633, 1759, 1772, 2187
CaiI	CAGNNNCTG	1 cut(s)	83
CfoI	GCGC	1 cut(s)	1988
Cfr10I	RCCGGY	2 cut(s)	1462, 1757
Cfr13I	GGNCC	7 cut(s)	716, 782, 1141, 1142, 1460, 1499, 1916
CseI	GACGC	1 cut(s)	1100
CsiI	ACCWGGT	1 cut(s)	1357
Csp6I	GTAC	3 cut(s)	91, 706, 1426
CviQI	GTAC	3 cut(s)	91, 706, 1426
DdeI	CTNAG	5 cut(s)	254, 366, 603, 1001, 1254
DpnI	GATC	6 cut(s)	143, 394, 888, 1106, 1342, 1515
DpnII	GATC	6 cut(s)	141, 392, 886, 1104, 1340, 1513
DraI	TTTAAA	1 cut(s)	1294
DrdI	GACNNNNNNGTC	1 cut(s)	2015
DseDI	GACNNNNNNGTC	1 cut(s)	2015
EaeI	YGGCCR	1 cut(s)	147
Eam1104I	CTCTTC	2 cut(s)	241, 1005
EarI	CTCTTC	2 cut(s)	241, 1005
Eco130I	CCWWGG	3 cut(s)	345, 1336, 1542
Eco147I	AGGCCT	1 cut(s)	1968
Eco24I	GRGCYC	1 cut(s)	1145
Eco31I	GGTCTC	3 cut(s)	282, 901, 2123
Eco47I	GGWCC	2 cut(s)	1460, 1916
Eco57I	CTGAAG	2 cut(s)	1556, 2175
Eco72I	CACGTG	1 cut(s)	1433
Eco88I	CYCGRG	1 cut(s)	557
Eco91I	GGTNACC	2 cut(s)	41, 340
EcoNI	CCTNNNNNAGG	2 cut(s)	50, 789
EcoO65I	GGTNACC	2 cut(s)	41, 340
EcoRI	GAATTC	1 cut(s)	104
EcoRII	CCWGG	6 cut(s)	800, 821, 1152, 1311, 1357, 1392
EcoT14I	CCWWGG	3 cut(s)	345, 1336, 1542
EcoT22I	ATGCAT	2 cut(s)	1057, 1861
EcoT38I	GRGCYC	1 cut(s)	1145
ErhI	CCWWGG	3 cut(s)	345, 1336, 1542
Esp3I	CGTCTC	1 cut(s)	1686
FalI	AAGNNNNNCTT	2 cut(s)	1526, 1558
FaqI	GGGAC	4 cut(s)	74, 600, 1031, 1307
FauI	CCCGC	3 cut(s)	384, 1333, 1624
FblI	GTMKAC	1 cut(s)	913
FokI	GGATG	9 cut(s)	69, 445, 475, 604, 776, 1376, 1437, 1628, 1799
FriOI	GRGCYC	1 cut(s)	1145
FspBI	CTAG	4 cut(s)	209, 1206, 1722, 1817
GlaI	GCGC	1 cut(s)	1987
GsaI	CCCAGC	2 cut(s)	722, 1481
GsuI	CTGGAG	1 cut(s)	210
HaeIII	GGCC	9 cut(s)	149, 213, 717, 784, 1143, 1266, 1501, 1968, 2055
HapII	CCGG	6 cut(s)	1068, 1463, 1527, 1584, 1758, 2126
HgaI	GACGC	1 cut(s)	1100
HhaI	GCGC	1 cut(s)	1988
Hin6I	GCGC	1 cut(s)	1986
HinP1I	GCGC	1 cut(s)	1986
HincII	GTYRAC	2 cut(s)	471, 1474
HindII	GTYRAC	2 cut(s)	471, 1474
HinfI	GANTC	9 cut(s)	327, 476, 505, 560, 728, 994, 1076, 1415, 1444
HpaI	GTTAAC	1 cut(s)	1474
HpaII	CCGG	6 cut(s)	1068, 1463, 1527, 1584, 1758, 2126
HphI	GGTGA	8 cut(s)	659, 698, 811, 1085, 1376, 1394, 1420, 2011
Hpy166II	GTNNAC	4 cut(s)	471, 914, 1436, 1474
Hpy188I	TCNGA	7 cut(s)	367, 773, 1060, 1081, 1116, 1255, 1826
Hpy188III	TCNNGA	6 cut(s)	189, 849, 1622, 1795, 2116, 2126
Hpy8I	GTNNAC	4 cut(s)	471, 914, 1436, 1474
Hpy99I	CGWCG	1 cut(s)	1382
HpyAV	CCTTC	9 cut(s)	128, 305, 416, 528, 1034, 1256, 1277, 1655, 1758
HpyCH4III	ACNGT	5 cut(s)	172, 544, 1097, 1382, 1873
HpyCH4IV	ACGT	5 cut(s)	625, 692, 1137, 1432, 1994
HpyF3I	CTNAG	5 cut(s)	254, 366, 603, 1001, 1254
HpySE526I	ACGT	5 cut(s)	625, 692, 1137, 1432, 1994
HspAI	GCGC	1 cut(s)	1986
Kpn2I	TCCGGA	1 cut(s)	2125
KroI	GCCGGC	1 cut(s)	1757
KroNI	GCCGGC	1 cut(s)	1759
KspAI	GTTAAC	1 cut(s)	1474
Kzo9I	GATC	6 cut(s)	141, 392, 886, 1104, 1340, 1513
LmnI	GCTCC	5 cut(s)	8, 191, 930, 1202, 1767
MabI	ACCWGGT	1 cut(s)	1357
MaeI	CTAG	4 cut(s)	209, 1206, 1722, 1817
MaeII	ACGT	5 cut(s)	625, 692, 1137, 1432, 1994
MaeIII	GTNAC	6 cut(s)	41, 175, 340, 817, 1699, 2017
MalI	GATC	6 cut(s)	143, 394, 888, 1106, 1342, 1515
MboI	GATC	6 cut(s)	141, 392, 886, 1104, 1340, 1513
MboII	GAAGA	7 cut(s)	228, 541, 647, 1022, 1668, 1939, 2098
MfeI	CAATTG	1 cut(s)	36
MflI	RGATCY	2 cut(s)	1340, 1513
MhlI	GDGCHC	2 cut(s)	1145, 1887
MlsI	TGGCCA	1 cut(s)	149
MluCI	AATT	7 cut(s)	36, 104, 711, 1087, 1299, 1617, 2206
MluNI	TGGCCA	1 cut(s)	149
MlyI	GAGTC	3 cut(s)	485, 569, 722
MmeI	TCCRAC	3 cut(s)	467, 1438, 1487
Mox20I	TGGCCA	1 cut(s)	149
Mph1103I	ATGCAT	2 cut(s)	1057, 1861
MroI	TCCGGA	1 cut(s)	2125
MroNI	GCCGGC	1 cut(s)	1757
MscI	TGGCCA	1 cut(s)	149
MseI	TTAA	3 cut(s)	1293, 1473, 2209
MslI	CAYNNNNRTG	1 cut(s)	1736
Msp20I	TGGCCA	1 cut(s)	149
MspA1I	CMGCKG	4 cut(s)	734, 1237, 1481, 2195
MspI	CCGG	6 cut(s)	1068, 1463, 1527, 1584, 1758, 2126
MspR9I	CCNGG	7 cut(s)	802, 823, 1154, 1313, 1359, 1394, 1527
MunI	CAATTG	1 cut(s)	36
Mva1269I	GAATGC	1 cut(s)	1566
MvaI	CCWGG	6 cut(s)	802, 823, 1154, 1313, 1359, 1394
MvnI	CGCG	1 cut(s)	1111
NaeI	GCCGGC	1 cut(s)	1759
NciI	CCSGG	1 cut(s)	1527
NcoI	CCATGG	1 cut(s)	1336
NdeII	GATC	6 cut(s)	141, 392, 886, 1104, 1340, 1513
NgoMIV	GCCGGC	1 cut(s)	1757
NlaIV	GGNNCC	2 cut(s)	351, 1143
NmeAIII	GCCGAG	1 cut(s)	1758
NmuCI	GTSAC	3 cut(s)	817, 1699, 2017
NsiI	ATGCAT	2 cut(s)	1057, 1861
NspI	RCATGY	4 cut(s)	857, 979, 1541, 2077
NspV	TTCGAA	1 cut(s)	1652
PaeI	GCATGC	1 cut(s)	1541
PasI	CCCWGGG	1 cut(s)	1153
PceI	AGGCCT	1 cut(s)	1968
PctI	GAATGC	1 cut(s)	1566
PdiI	GCCGGC	1 cut(s)	1759
PfeI	GAWTC	6 cut(s)	327, 505, 994, 1076, 1415, 1444
PflFI	GACNNNGTC	1 cut(s)	475
PleI	GAGTC	3 cut(s)	484, 568, 722
PmaCI	CACGTG	1 cut(s)	1433
PmlI	CACGTG	1 cut(s)	1433
PpsI	GAGTC	3 cut(s)	484, 568, 722
Ppu21I	YACGTR	2 cut(s)	626, 1433
PshAI	GACNNNNGTC	1 cut(s)	844
Psp6I	CCWGG	6 cut(s)	800, 821, 1152, 1311, 1357, 1392
PspCI	CACGTG	1 cut(s)	1433
PspEI	GGTNACC	2 cut(s)	41, 340
PspFI	CCCAGC	2 cut(s)	718, 1477
PspGI	CCWGG	6 cut(s)	800, 821, 1152, 1311, 1357, 1392
PspN4I	GGNNCC	2 cut(s)	351, 1143
PspOMI	GGGCCC	1 cut(s)	1141
PspPI	GGNCC	7 cut(s)	716, 782, 1141, 1142, 1460, 1499, 1916
PstNI	CAGNNNCTG	1 cut(s)	83
PsuI	RGATCY	2 cut(s)	1340, 1513
PsyI	GACNNNGTC	1 cut(s)	475
PvuII	CAGCTG	3 cut(s)	1237, 1481, 2195
RsaI	GTAC	3 cut(s)	92, 707, 1427
RsaNI	GTAC	3 cut(s)	91, 706, 1426
RseI	CAYNNNNRTG	1 cut(s)	1736
SaqAI	TTAA	3 cut(s)	1293, 1473, 2209
Sau3AI	GATC	6 cut(s)	141, 392, 886, 1104, 1340, 1513
Sau96I	GGNCC	7 cut(s)	716, 782, 1141, 1142, 1460, 1499, 1916
SchI	GAGTC	3 cut(s)	485, 569, 722
ScrFI	CCNGG	7 cut(s)	802, 823, 1154, 1313, 1359, 1394, 1527
SduI	GDGCHC	2 cut(s)	1145, 1887
SexAI	ACCWGGT	1 cut(s)	1357
SfcI	CTRYAG	1 cut(s)	195
SfuI	TTCGAA	1 cut(s)	1652
SinI	GGWCC	2 cut(s)	1460, 1916
SmiMI	CAYNNNNRTG	1 cut(s)	1736
SmlI	CTYRAG	2 cut(s)	596, 1622
SmoI	CTYRAG	2 cut(s)	596, 1622
SphI	GCATGC	1 cut(s)	1541
Sse9I	AATT	7 cut(s)	36, 104, 711, 1087, 1299, 1617, 2206
SseBI	AGGCCT	1 cut(s)	1968
SspMI	CTAG	4 cut(s)	209, 1206, 1722, 1817
StuI	AGGCCT	1 cut(s)	1968
StyD4I	CCNGG	7 cut(s)	800, 821, 1152, 1311, 1357, 1392, 1525
StyI	CCWWGG	3 cut(s)	345, 1336, 1542
TaaI	ACNGT	5 cut(s)	172, 544, 1097, 1382, 1873
TaiI	ACGT	5 cut(s)	628, 695, 1140, 1435, 1997
TaqI	TCGA	6 cut(s)	315, 850, 1352, 1652, 1868, 1963
TasI	AATT	7 cut(s)	36, 104, 711, 1087, 1299, 1617, 2206
TatI	WGTACW	3 cut(s)	90, 705, 1425
TauI	GCSGC	1 cut(s)	216
TfiI	GAWTC	6 cut(s)	327, 505, 994, 1076, 1415, 1444
Tru1I	TTAA	3 cut(s)	1293, 1473, 2209
Tru9I	TTAA	3 cut(s)	1293, 1473, 2209
TscAI	CASTG	4 cut(s)	1699, 1704, 1852, 2040
TseFI	GTSAC	3 cut(s)	817, 1699, 2017
Tsp45I	GTSAC	3 cut(s)	817, 1699, 2017
TspDTI	ATGAA	5 cut(s)	780, 1023, 1378, 1457, 2098
TspGWI	ACGGA	2 cut(s)	604, 2080
TspRI	CASTG	4 cut(s)	1699, 1704, 1852, 2040
Tth111I	GACNNNGTC	1 cut(s)	475
VpaK11BI	GGWCC	2 cut(s)	1460, 1916
XagI	CCTNNNNNAGG	2 cut(s)	50, 789
XapI	RAATTY	3 cut(s)	104, 1299, 1617
XceI	RCATGY	4 cut(s)	857, 979, 1541, 2077
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1744
XmiI	GTMKAC	1 cut(s)	913
XspI	CTAG	4 cut(s)	209, 1206, 1722, 1817
Zsp2I	ATGCAT	2 cut(s)	1057, 1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.