Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001036

Physical Location & Seq

Genomic Coordinates Reverse (-)

31829879 .. 31835811

Gene Structure 5933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G025500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGCCCCTTTCGACAAATCTAAACCAAAGACATTGCGTTCTTTTCCTACTTGATTGGGGGTTACATTCATTCATGGGTAAAAACATGAAGGGAGCTGCGCTTGTGGCTTTTGCTGCTACAATTGGTAACTTTCTGCAAGGATGGGACAATGCTACAATTGCTGGGGCTATTGTTTACATCACGGACGATTTTGATTTAGGTAGCTCGGTAGAAGGTCTTGTTGTGGCCATGTCACTCATCGGGGCAACAGTTATTACAACATGCTCAGGAGCCATATCAGATTGGCTTGGTCGGAGGCCAATGCTAATAGCATCATCAGTTCTTTATTTTGTGAGTGGCTTGGTGATGTTGTGGTCACCCAATGTGTATGTACTATGTCTTGCAAGGCTATTAGATGGATTTGGAATTGGTTTAGCGGTTACTCTTGTCCCAGTCTACATATCCGAGACCGCCCCATCAGATATTAGGGGATCATTGAATACTCTTCCACAGTTCCTTGGTTCAGGAGGCATGTTTTTGTCATATTGTATGGTTTTCGGGATGTCACTGTTGGCCTCGCCAAGCTGGAGACTGATGCTTGGGATTCTTTCCATTCTCTCTCTTATATATTTTGTATTAACCGTGTTTTACTTACCTGAATCTCCTCGATGGCTTGTGAGTAAGGGCAGGATGCTCGAGGCAAAGAAGGTTCTCCAGAGCTTGCGTGGCACTGAAGATGTTTCTGGTGAGATGGCTTTGCTTGTTGAAGGTCTTGGAGTTGGAGGTGAACCATCTTTAGAAGAGTACATCATAGGCCTAGCTGATGATCTTGATGGTCAGGAAACAGCTGACAAAGACAAAATCAGGTTATATGGACCTGAAGAGGGCCTTTCCTGGGTTGCTAGACCTGTAACTGGGCAGGGTTCTATTGTCAGTCTTGTCTCTCGCCAAGGAAGCTTGGCAACCCTGAATGTGCCTCTAATGGATCCTCTTGTCACTCTCTTTGGTAGTGTCCATGAAAACTTCCCAGAGGCGGGGAGTACGCGGGGAAGCATGCTCTTTTCTAACTTTGGCAGCATGTTCAGCACAGCAGATCATCCACGGGGTAAAACTGATCAATGGGATGAAGAGAGCTTGCATAGGGAAGGTGAGGACTATGCATCTGGAGGAGACTCAGATGACAATCTGCATAGTCCTTTGATTTCACGCCAGACGACAAGTATGGAAAAGGATATGGTGCCACCTCCTCCTTCCCATGGTAGTATTCTAAGCATGAGGCGCAACAGCAGTCTCATGCAAGGAACTGGGGAGACAGTTGGTAGCACAGGCATTGGTGGTGGGTGGCAGTTGGCATGGAAGTGGTCTGAGAGACAAGGTGAGGATGGAAAGAAGGAAGGAGGATTCCAGAGGGTATATTTGCACCAGGAAGGAGTCCCTGGCTCACGTCGTGGGTCCCTTGTGTCACTTCCTGGTGGTGATGTTCCTGCAGAAGGCGAGTTCATCCAGGCAGCCGCTCTGGTCAGTCAGCCTGCTCTGTATTCGAAGTCACTTATCGATCAGCATCCTGTTGGACCTGCAATGGTTCATCCATCAGAAACAGCTTCGAAAGGACCAATATGGGCTGCTCTGCTTGAACCAGGGATTAAGCATGCATTGTTTGTTGGAATTGGAATCCAGATTCTTCAGCAGTTTTCTGGGATAAATGGAGTTCTCTATTACACTCCTCAAATTCTTGAAGAGGCTGGAGTCTCAGTTCTTCTTGAAAGCTTTGGTCTCAGTACAACATCTGCATCTTTCCTCATCAGTGCATTCACAACTTTGTTGATGCTTCCTTGTATAGGTCTAGCCATGAAGCTCATGGATATCTCTGGTAGAAGGATCCTGCTACTGACTACAGTTCCTGTGTTGATTGTGTCACTCATTCTTCTAGTCATTGCCAACTTAGTTACCCTAAGTTCAGTCGTTGAAGCCGCAATATCAACCACTTGTGTGATAATCTATTTCTGCGTCTTTGTCATGGCCTATGGGCCAATCCCAAATATCCTTTGCTCCGAGATCTTTCCGACGAGGGTGCGTGGCCTCTGCATTGCCATCTGTGCCCTGGCGTACTGGATTTCAGACATTATCGTCACCTACTCGCTTCCAGTTCTGCTTGATTCAATAGGGCTAGCTGGTATCTTTGGGATTTATGCCGTTGTTTGTGTCATCTCTTTGGTGTTTATCTACTTGAAAGTTCCGGAAACCAAAGGCATGCCCCTTGAAGTCATTACTGAATTCTTTTCTGTTGGTGCAAGACAAATTGCTGCTGCCAAAAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009605 GO:0009607 GO:0009624 GO:0009705 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

766

Amino Acids

82.14

Weight (kDa)

5.02

Isoelectric Point (pI)

36.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	35 - 249	3.4e-49	Sugar (and other) transporter
MFS_1	PF07690	40 - 222	8e-23	Major Facilitator Superfamily
Sugar_tr	PF00083	533 - 753	1.2e-38	Sugar (and other) transporter
MFS_1	PF07690	578 - 742	1e-08	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300
fragaria_vesca	FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950
malus_domestica	MD05G1139800.v1.1 MD06G1005100.v1.1 MD10G1142100.v1.1
prunus_persica	Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1
pyrus_communis	pycom05g13500 pycom10g12180
rosa_chinensis	RchiOBHm_Chr6g0280981 RchiOBHm_Chr7g0216501
rosa_laevigata	RLG00000002567 RLG00000002578 RLG00000013010
rosa_multiflora	Rmu_sc0000692.1_g000001 Rmu_sc0030247.1_g000002 Rmu_sc0030424.1_g000003 Rmu_sc0034915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243170 Rroxscaffold_7G00187430
rosa_rugosa	Rorug06G0137300 Rorug06G0137400 Rorug06G0137500 Rorug07G0160700
rosa_samantha	Rh6AG249900 Rh6CG252500 Rh7BG291500 Rh7DG301100
rosa_wichuraiana	Rw6G021600 Rw7G025360 Rw7G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2105
Acc36I	ACCTGC	1 cut(s)	1561
AccB1I	GGYRCC	1 cut(s)	1216
AccBSI	CCGCTC	1 cut(s)	1493
AccI	GTMKAC	1 cut(s)	435
AccII	CGCG	1 cut(s)	1024
AccIII	TCCGGA	1 cut(s)	2215
AciI	CCGC	6 cut(s)	416, 450, 1013, 1024, 1491, 1950
AclWI	GGATC	5 cut(s)	478, 959, 972, 1852, 1865
AcoI	YGGCCR	1 cut(s)	225
AcsI	RAATTY	2 cut(s)	1707, 2252
AcuI	CTGAAG	3 cut(s)	732, 879, 1646
AdeI	CACNNNGTG	1 cut(s)	1427
AfaI	GTAC	5 cut(s)	372, 785, 1021, 1759, 2087
AfiI	CCNNNNNNNGG	8 cut(s)	863, 874, 893, 1012, 1013, 1235, 1469, 1817
AgsI	TTSAA	9 cut(s)	478, 746, 1613, 1715, 1742, 1946, 2139, 2209, 2240
AjiI	CACGTC	1 cut(s)	1424
AjnI	CCWGG	7 cut(s)	872, 1401, 1414, 1447, 1482, 1615, 2079
AleI	CACNNNNGTG	1 cut(s)	1967
AloI	GAACNNNNNNTCC	2 cut(s)	1716, 1748
Alw26I	GTCTC	9 cut(s)	440, 562, 925, 1143, 1274, 1283, 1342, 1732, 1757
AlwI	GGATC	5 cut(s)	478, 959, 972, 1852, 1865
AlwNI	CAGNNNCTG	1 cut(s)	1880
Ama87I	CYCGRG	1 cut(s)	674
Aor13HI	TCCGGA	1 cut(s)	2215
AoxI	GGCC	8 cut(s)	225, 296, 552, 793, 865, 1998, 2006, 2056
ApeKI	GCWGC	7 cut(s)	95, 113, 1053, 1487, 1601, 2282, 2285
ApoI	RAATTY	2 cut(s)	1707, 2252
AspLEI	GCGC	2 cut(s)	100, 1260
AspS9I	GGNCC	6 cut(s)	854, 865, 1431, 1550, 1589, 2006
AsuHPI	GGTGA	8 cut(s)	348, 355, 737, 776, 1139, 1367, 1466, 2101
AsuII	TTCGAA	2 cut(s)	1520, 1583
AsuNHI	GCTAGC	1 cut(s)	2146
AvaI	CYCGRG	1 cut(s)	674
AvaII	GGWCC	4 cut(s)	854, 1431, 1550, 1589
BaeGI	GKGCMC	1 cut(s)	2080
BalI	TGGCCA	1 cut(s)	227
BamHI	GGATCC	2 cut(s)	964, 1857
BanI	GGYRCC	1 cut(s)	1216
BbvI	GCAGC	7 cut(s)	82, 100, 1065, 1499, 1588, 2269, 2272
BceAI	ACGGC	1 cut(s)	2156
BcgI	CGANNNNNNTGC	4 cut(s)	655, 689, 2032, 2066
BciT130I	CCWGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
BclI	TGATCA	1 cut(s)	1093
BcoDI	GTCTC	9 cut(s)	440, 562, 925, 1143, 1274, 1283, 1342, 1732, 1757
BfaI	CTAG	5 cut(s)	797, 882, 1823, 1907, 2147
BfmI	CTRYAG	2 cut(s)	1464, 1872
BfuAI	ACCTGC	1 cut(s)	1561
BglII	AGATCT	1 cut(s)	2034
BisI	GCNGC	9 cut(s)	96, 114, 1054, 1488, 1491, 1602, 1950, 2283, 2286
BlsI	GCNGC	9 cut(s)	97, 115, 1055, 1489, 1492, 1603, 1951, 2284, 2287
Bme1390I	CCNGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
Bme18I	GGWCC	4 cut(s)	854, 1431, 1550, 1589
BmeT110I	CYCGRG	1 cut(s)	674
BmgBI	CACGTC	1 cut(s)	1424
BmgT120I	GGNCC	6 cut(s)	854, 865, 1431, 1550, 1589, 2006
BmiI	GGNNCC	6 cut(s)	271, 966, 1218, 1432, 1433, 1859
BmrFI	CCNGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
BmrI	ACTGGG	3 cut(s)	425, 903, 1293
BmsI	GCATC	7 cut(s)	320, 564, 660, 1148, 1549, 1778, 1794
BmtI	GCTAGC	1 cut(s)	2150
BmuI	ACTGGG	3 cut(s)	425, 903, 1293
BpmI	CTGGAG	4 cut(s)	586, 677, 1164, 1743
Bpu10I	CCTNAGC	1 cut(s)	265
Bpu14I	TTCGAA	2 cut(s)	1520, 1583
Bsa29I	ATCGAT	1 cut(s)	1533
BsaBI	GATNNNNATC	2 cut(s)	1161, 1539
BsaI	GGTCTC	2 cut(s)	440, 1757
BsaJI	CCNNGG	8 cut(s)	496, 873, 928, 1079, 1234, 1414, 1616, 2079
BsaWI	WCCGGW	1 cut(s)	2215
BsaXI	ACNNNNNCTCC	2 cut(s)	1716, 1746
Bsc4I	CCNNNNNNNGG	8 cut(s)	863, 874, 893, 1012, 1013, 1235, 1469, 1817
Bse1I	ACTGG	5 cut(s)	431, 898, 1288, 2093, 2123
Bse3DI	GCAATG	4 cut(s)	31, 1563, 1911, 2064
Bse8I	GATNNNNATC	2 cut(s)	1161, 1539
BseAI	TCCGGA	1 cut(s)	2215
BseBI	CCWGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
BseCI	ATCGAT	1 cut(s)	1533
BseDI	CCNNGG	8 cut(s)	496, 873, 928, 1079, 1234, 1414, 1616, 2079
BseGI	GGATG	9 cut(s)	146, 546, 675, 1075, 1108, 1366, 1479, 1540, 1564
BseJI	GATNNNNATC	2 cut(s)	1161, 1539
BseLI	CCNNNNNNNGG	8 cut(s)	863, 874, 893, 1012, 1013, 1235, 1469, 1817
BseMI	GCAATG	4 cut(s)	31, 1563, 1911, 2064
BseMII	CTCAG	5 cut(s)	279, 1167, 1335, 1743, 1768
BseNI	ACTGG	5 cut(s)	431, 898, 1288, 2093, 2123
BseRI	GAGGAG	4 cut(s)	633, 1161, 1215, 1692
BseSI	GKGCMC	1 cut(s)	2080
BseXI	GCAGC	7 cut(s)	82, 100, 1065, 1499, 1588, 2269, 2272
BseYI	CCCAGC	1 cut(s)	161
Bsh1236I	CGCG	1 cut(s)	1024
BshFI	GGCC	8 cut(s)	227, 298, 554, 795, 867, 2000, 2008, 2058
BshNI	GGYRCC	1 cut(s)	1216
BshVI	ATCGAT	1 cut(s)	1533
BsiHKCI	CYCGRG	1 cut(s)	674
BsiSI	CCGG	1 cut(s)	2216
BslFI	GGGAC	4 cut(s)	158, 413, 1397, 1417
BslI	CCNNNNNNNGG	8 cut(s)	863, 874, 893, 1012, 1013, 1235, 1469, 1817
BsmAI	GTCTC	9 cut(s)	440, 562, 925, 1143, 1274, 1283, 1342, 1732, 1757
BsmFI	GGGAC	4 cut(s)	158, 413, 1397, 1417
BsmI	GAATGC	1 cut(s)	1787
BsnI	GGCC	8 cut(s)	227, 298, 554, 795, 867, 2000, 2008, 2058
Bso31I	GGTCTC	2 cut(s)	440, 1757
BsoBI	CYCGRG	1 cut(s)	674
Bsp119I	TTCGAA	2 cut(s)	1520, 1583
Bsp1286I	GDGCHC	1 cut(s)	2080
Bsp13I	TCCGGA	1 cut(s)	2215
Bsp143I	GATC	8 cut(s)	470, 805, 964, 1072, 1093, 1534, 1857, 2034
Bsp19I	CCATGG	1 cut(s)	1234
BspACI	CCGC	6 cut(s)	416, 450, 1013, 1024, 1491, 1950
BspANI	GGCC	8 cut(s)	227, 298, 554, 795, 867, 2000, 2008, 2058
BspCNI	CTCAG	5 cut(s)	278, 1166, 1336, 1742, 1767
BspDI	ATCGAT	1 cut(s)	1533
BspEI	TCCGGA	1 cut(s)	2215
BspFNI	CGCG	1 cut(s)	1024
BspLI	GGNNCC	6 cut(s)	271, 966, 1218, 1432, 1433, 1859
BspMAI	CTGCAG	1 cut(s)	1468
BspMI	ACCTGC	1 cut(s)	1561
BspOI	GCTAGC	1 cut(s)	2150
BspPI	GGATC	5 cut(s)	478, 959, 972, 1852, 1865
BspT104I	TTCGAA	2 cut(s)	1520, 1583
BspT107I	GGYRCC	1 cut(s)	1216
BspTNI	GGTCTC	2 cut(s)	440, 1757
BsrBI	CCGCTC	1 cut(s)	1493
BsrDI	GCAATG	4 cut(s)	31, 1563, 1911, 2064
BsrI	ACTGG	5 cut(s)	431, 898, 1288, 2093, 2123
BssECI	CCNNGG	8 cut(s)	496, 873, 928, 1079, 1234, 1414, 1616, 2079
BssMI	GATC	8 cut(s)	470, 805, 964, 1072, 1093, 1534, 1857, 2034
BssT1I	CCWWGG	3 cut(s)	496, 928, 1234
Bst2UI	CCWGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
Bst4CI	ACNGT	6 cut(s)	250, 492, 549, 622, 1294, 1876
Bst6I	CTCTTC	5 cut(s)	489, 774, 855, 1101, 1710
BstBI	TTCGAA	2 cut(s)	1520, 1583
BstC8I	GCNNGC	7 cut(s)	701, 1034, 1115, 1509, 1629, 2148, 2231
BstDEI	CTNAG	8 cut(s)	265, 1153, 1247, 1344, 1729, 1754, 1921, 1931
BstDSI	CCRYGG	2 cut(s)	1079, 1234
BstEII	GGTNACC	1 cut(s)	354
BstENI	CCTNNNNNAGG	2 cut(s)	1467, 1815
BstF5I	GGATG	9 cut(s)	146, 546, 675, 1075, 1108, 1366, 1479, 1540, 1564
BstFNI	CGCG	1 cut(s)	1024
BstHHI	GCGC	2 cut(s)	100, 1260
BstKTI	GATC	8 cut(s)	473, 808, 967, 1075, 1096, 1537, 1860, 2037
BstMAI	GTCTC	9 cut(s)	440, 562, 925, 1143, 1274, 1283, 1342, 1732, 1757
BstMBI	GATC	8 cut(s)	470, 805, 964, 1072, 1093, 1534, 1857, 2034
BstMWI	GCNNNNNNNGC	8 cut(s)	104, 113, 158, 705, 933, 1062, 1257, 2075
BstNI	CCWGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
BstNSI	RCATGY	6 cut(s)	264, 514, 1036, 1060, 1631, 2233
BstPI	GGTNACC	1 cut(s)	354
BstSCI	CCNGG	7 cut(s)	872, 1401, 1414, 1447, 1482, 1615, 2079
BstSFI	CTRYAG	2 cut(s)	1464, 1872
BstSLI	GKGCMC	1 cut(s)	2080
BstUI	CGCG	1 cut(s)	1024
BstV1I	GCAGC	7 cut(s)	82, 100, 1065, 1499, 1588, 2269, 2272
BstX2I	RGATCY	3 cut(s)	964, 1857, 2034
BstYI	RGATCY	3 cut(s)	964, 1857, 2034
Bsu15I	ATCGAT	1 cut(s)	1533
BsuRI	GGCC	8 cut(s)	227, 298, 554, 795, 867, 2000, 2008, 2058
BsuTUI	ATCGAT	1 cut(s)	1533
BtgI	CCRYGG	2 cut(s)	1079, 1234
BtrI	CACGTC	1 cut(s)	1424
BtsCI	GGATG	9 cut(s)	146, 546, 675, 1075, 1108, 1366, 1479, 1540, 1564
BtsIMutI	CAGTG	3 cut(s)	545, 708, 1789
BveI	ACCTGC	1 cut(s)	1561
Cac8I	GCNNGC	7 cut(s)	701, 1034, 1115, 1509, 1629, 2148, 2231
CaiI	CAGNNNCTG	1 cut(s)	1880
CfoI	GCGC	2 cut(s)	100, 1260
Cfr13I	GGNCC	6 cut(s)	854, 865, 1431, 1550, 1589, 2006
ClaI	ATCGAT	1 cut(s)	1533
CseI	GACGC	1 cut(s)	1975
Csp6I	GTAC	5 cut(s)	371, 784, 1020, 1758, 2086
CviQI	GTAC	5 cut(s)	371, 784, 1020, 1758, 2086
DdeI	CTNAG	8 cut(s)	265, 1153, 1247, 1344, 1729, 1754, 1921, 1931
DpnI	GATC	8 cut(s)	472, 807, 966, 1074, 1095, 1536, 1859, 2036
DpnII	GATC	8 cut(s)	470, 805, 964, 1072, 1093, 1534, 1857, 2034
DraIII	CACNNNGTG	1 cut(s)	1427
DrdI	GACNNNNNNGTC	1 cut(s)	2105
DseDI	GACNNNNNNGTC	1 cut(s)	2105
EaeI	YGGCCR	1 cut(s)	225
Eam1104I	CTCTTC	5 cut(s)	489, 774, 855, 1101, 1710
EarI	CTCTTC	5 cut(s)	489, 774, 855, 1101, 1710
Eco130I	CCWWGG	3 cut(s)	496, 928, 1234
Eco147I	AGGCCT	1 cut(s)	795
Eco31I	GGTCTC	2 cut(s)	440, 1757
Eco32I	GATATC	1 cut(s)	1843
Eco47I	GGWCC	4 cut(s)	854, 1431, 1550, 1589
Eco57I	CTGAAG	3 cut(s)	732, 879, 1646
Eco88I	CYCGRG	1 cut(s)	674
Eco91I	GGTNACC	1 cut(s)	354
EcoNI	CCTNNNNNAGG	2 cut(s)	1467, 1815
EcoO109I	RGGNCCY	2 cut(s)	865, 1431
EcoO65I	GGTNACC	1 cut(s)	354
EcoRI	GAATTC	1 cut(s)	2252
EcoRII	CCWGG	7 cut(s)	872, 1401, 1414, 1447, 1482, 1615, 2079
EcoRV	GATATC	1 cut(s)	1843
EcoT14I	CCWWGG	3 cut(s)	496, 928, 1234
EcoT22I	ATGCAT	2 cut(s)	1141, 1633
ErhI	CCWWGG	3 cut(s)	496, 928, 1234
FalI	AAGNNNNNCTT	2 cut(s)	852, 884
FaqI	GGGAC	4 cut(s)	158, 413, 1397, 1417
FauI	CCCGC	2 cut(s)	1006, 1017
FbaI	TGATCA	1 cut(s)	1093
FblI	GTMKAC	1 cut(s)	435
Fnu4HI	GCNGC	9 cut(s)	96, 114, 1054, 1488, 1491, 1602, 1950, 2283, 2286
FokI	GGATG	9 cut(s)	153, 553, 682, 1062, 1115, 1373, 1466, 1527, 1551
Fsp4HI	GCNGC	9 cut(s)	96, 114, 1054, 1488, 1491, 1602, 1950, 2283, 2286
FspBI	CTAG	5 cut(s)	797, 882, 1823, 1907, 2147
GlaI	GCGC	2 cut(s)	99, 1259
GluI	GCNGC	9 cut(s)	96, 114, 1054, 1488, 1491, 1602, 1950, 2283, 2286
GsaI	CCCAGC	1 cut(s)	165
GsuI	CTGGAG	4 cut(s)	586, 677, 1164, 1743
HaeIII	GGCC	8 cut(s)	227, 298, 554, 795, 867, 2000, 2008, 2058
HapII	CCGG	1 cut(s)	2216
HgaI	GACGC	1 cut(s)	1975
HhaI	GCGC	2 cut(s)	100, 1260
Hin6I	GCGC	2 cut(s)	98, 1258
HinP1I	GCGC	2 cut(s)	98, 1258
HindIII	AAGCTT	2 cut(s)	934, 1744
HinfI	GANTC	9 cut(s)	583, 638, 1151, 1380, 1410, 1650, 1657, 1725, 2135
HpaII	CCGG	1 cut(s)	2216
HphI	GGTGA	8 cut(s)	348, 355, 737, 776, 1139, 1367, 1466, 2101
Hpy166II	GTNNAC	3 cut(s)	175, 436, 767
Hpy8I	GTNNAC	3 cut(s)	175, 436, 767
Hpy99I	CGWCG	2 cut(s)	1428, 2047
HpyCH4III	ACNGT	6 cut(s)	250, 492, 549, 622, 1294, 1876
HpyCH4IV	ACGT	1 cut(s)	1423
HpyF10VI	GCNNNNNNNGC	8 cut(s)	104, 113, 158, 705, 933, 1062, 1257, 2075
HpyF3I	CTNAG	8 cut(s)	265, 1153, 1247, 1344, 1729, 1754, 1921, 1931
HpySE526I	ACGT	1 cut(s)	1423
HspAI	GCGC	2 cut(s)	98, 1258
KflI	GGGWCCC	1 cut(s)	1431
Kpn2I	TCCGGA	1 cut(s)	2215
Ksp22I	TGATCA	1 cut(s)	1093
Kzo9I	GATC	8 cut(s)	470, 805, 964, 1072, 1093, 1534, 1857, 2034
LmnI	GCTCC	3 cut(s)	92, 269, 2033
Lsp1109I	GCAGC	7 cut(s)	82, 100, 1065, 1499, 1588, 2269, 2272
LweI	GCATC	7 cut(s)	320, 564, 660, 1148, 1549, 1778, 1794
MaeI	CTAG	5 cut(s)	797, 882, 1823, 1907, 2147
MaeII	ACGT	1 cut(s)	1423
MalI	GATC	8 cut(s)	472, 807, 966, 1074, 1095, 1536, 1859, 2036
MbiI	CCGCTC	1 cut(s)	1493
MboI	GATC	8 cut(s)	470, 805, 964, 1072, 1093, 1534, 1857, 2034
MboII	GAAGA	9 cut(s)	476, 725, 791, 872, 1118, 1652, 1727, 1727, 1895
MfeI	CAATTG	2 cut(s)	120, 156
MflI	RGATCY	3 cut(s)	964, 1857, 2034
MhlI	GDGCHC	1 cut(s)	2080
MlsI	TGGCCA	1 cut(s)	227
MluCI	AATT	7 cut(s)	120, 156, 405, 1644, 1707, 2252, 2277
MluNI	TGGCCA	1 cut(s)	227
MlyI	GAGTC	3 cut(s)	1145, 1419, 1734
MmeI	TCCRAC	5 cut(s)	272, 739, 1528, 1621, 2066
Mox20I	TGGCCA	1 cut(s)	227
Mph1103I	ATGCAT	2 cut(s)	1141, 1633
MroI	TCCGGA	1 cut(s)	2215
MscI	TGGCCA	1 cut(s)	227
MseI	TTAA	2 cut(s)	617, 1623
MslI	CAYNNNNRTG	2 cut(s)	1336, 1967
Msp20I	TGGCCA	1 cut(s)	227
MspA1I	CMGCKG	1 cut(s)	827
MspI	CCGG	1 cut(s)	2216
MspR9I	CCNGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
MunI	CAATTG	2 cut(s)	120, 156
Mva1269I	GAATGC	1 cut(s)	1787
MvaI	CCWGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
MvnI	CGCG	1 cut(s)	1024
MwoI	GCNNNNNNNGC	8 cut(s)	104, 113, 158, 705, 933, 1062, 1257, 2075
NcoI	CCATGG	1 cut(s)	1234
NdeII	GATC	8 cut(s)	470, 805, 964, 1072, 1093, 1534, 1857, 2034
NheI	GCTAGC	1 cut(s)	2146
NlaIV	GGNNCC	6 cut(s)	271, 966, 1218, 1432, 1433, 1859
NmuCI	GTSAC	8 cut(s)	231, 354, 543, 973, 1440, 1524, 1893, 2107
NsiI	ATGCAT	2 cut(s)	1141, 1633
NspI	RCATGY	6 cut(s)	264, 514, 1036, 1060, 1631, 2233
NspV	TTCGAA	2 cut(s)	1520, 1583
OliI	CACNNNNGTG	1 cut(s)	1967
PaeI	GCATGC	3 cut(s)	1036, 1631, 2233
PaeR7I	CTCGAG	1 cut(s)	674
PceI	AGGCCT	1 cut(s)	795
PctI	GAATGC	1 cut(s)	1787
PfeI	GAWTC	6 cut(s)	583, 638, 1380, 1650, 1657, 2135
PkrI	GCNGC	9 cut(s)	97, 115, 1055, 1489, 1492, 1603, 1951, 2284, 2287
PleI	GAGTC	3 cut(s)	1145, 1418, 1733
PpsI	GAGTC	3 cut(s)	1145, 1418, 1733
PpuMI	RGGWCCY	1 cut(s)	1431
Psp5II	RGGWCCY	1 cut(s)	1431
Psp6I	CCWGG	7 cut(s)	872, 1401, 1414, 1447, 1482, 1615, 2079
PspEI	GGTNACC	1 cut(s)	354
PspFI	CCCAGC	1 cut(s)	161
PspGI	CCWGG	7 cut(s)	872, 1401, 1414, 1447, 1482, 1615, 2079
PspN4I	GGNNCC	6 cut(s)	271, 966, 1218, 1432, 1433, 1859
PspPI	GGNCC	6 cut(s)	854, 865, 1431, 1550, 1589, 2006
PspPPI	RGGWCCY	1 cut(s)	1431
PspXI	VCTCGAGB	1 cut(s)	674
PstI	CTGCAG	1 cut(s)	1468
PstNI	CAGNNNCTG	1 cut(s)	1880
PsuI	RGATCY	3 cut(s)	964, 1857, 2034
PvuII	CAGCTG	1 cut(s)	827
RsaI	GTAC	5 cut(s)	372, 785, 1021, 1759, 2087
RsaNI	GTAC	5 cut(s)	371, 784, 1020, 1758, 2086
RseI	CAYNNNNRTG	2 cut(s)	1336, 1967
SaqAI	TTAA	2 cut(s)	617, 1623
SatI	GCNGC	9 cut(s)	96, 114, 1054, 1488, 1491, 1602, 1950, 2283, 2286
Sau3AI	GATC	8 cut(s)	470, 805, 964, 1072, 1093, 1534, 1857, 2034
Sau96I	GGNCC	6 cut(s)	854, 865, 1431, 1550, 1589, 2006
SchI	GAGTC	3 cut(s)	1145, 1419, 1734
ScrFI	CCNGG	7 cut(s)	874, 1403, 1416, 1449, 1484, 1617, 2081
SduI	GDGCHC	1 cut(s)	2080
SfaNI	GCATC	7 cut(s)	320, 564, 660, 1148, 1549, 1778, 1794
SfcI	CTRYAG	2 cut(s)	1464, 1872
Sfr274I	CTCGAG	1 cut(s)	674
SfuI	TTCGAA	2 cut(s)	1520, 1583
SinI	GGWCC	4 cut(s)	854, 1431, 1550, 1589
SlaI	CTCGAG	1 cut(s)	674
SmiMI	CAYNNNNRTG	2 cut(s)	1336, 1967
SmlI	CTYRAG	1 cut(s)	674
SmoI	CTYRAG	1 cut(s)	674
SphI	GCATGC	3 cut(s)	1036, 1631, 2233
Sse9I	AATT	7 cut(s)	120, 156, 405, 1644, 1707, 2252, 2277
SseBI	AGGCCT	1 cut(s)	795
SsiI	CCGC	6 cut(s)	416, 450, 1013, 1024, 1491, 1950
SspMI	CTAG	5 cut(s)	797, 882, 1823, 1907, 2147
StuI	AGGCCT	1 cut(s)	795
StyD4I	CCNGG	7 cut(s)	872, 1401, 1414, 1447, 1482, 1615, 2079
StyI	CCWWGG	3 cut(s)	496, 928, 1234
TaaI	ACNGT	6 cut(s)	250, 492, 549, 622, 1294, 1876
TaiI	ACGT	1 cut(s)	1426
TaqI	TCGA	6 cut(s)	11, 646, 675, 1520, 1533, 1583
TasI	AATT	7 cut(s)	120, 156, 405, 1644, 1707, 2252, 2277
TatI	WGTACW	3 cut(s)	370, 783, 1757
TauI	GCSGC	2 cut(s)	1493, 1952
TfiI	GAWTC	6 cut(s)	583, 638, 1380, 1650, 1657, 2135
Tru1I	TTAA	2 cut(s)	617, 1623
Tru9I	TTAA	2 cut(s)	617, 1623
TscAI	CASTG	3 cut(s)	552, 715, 1789
TseFI	GTSAC	8 cut(s)	231, 354, 543, 973, 1440, 1524, 1893, 2107
TseI	GCWGC	7 cut(s)	95, 113, 1053, 1487, 1601, 2282, 2285
Tsp45I	GTSAC	8 cut(s)	231, 354, 543, 973, 1440, 1524, 1893, 2107
TspDTI	ATGAA	8 cut(s)	57, 61, 101, 1011, 1119, 1468, 1553, 1844
TspGWI	ACGGA	1 cut(s)	197
TspRI	CASTG	3 cut(s)	552, 715, 1789
VpaK11BI	GGWCC	4 cut(s)	854, 1431, 1550, 1589
XagI	CCTNNNNNAGG	2 cut(s)	1467, 1815
XapI	RAATTY	2 cut(s)	1707, 2252
XceI	RCATGY	6 cut(s)	264, 514, 1036, 1060, 1631, 2233
XcmI	CCANNNNNNNNNTGG	3 cut(s)	701, 1834, 2077
XhoI	CTCGAG	1 cut(s)	674
XmiI	GTMKAC	1 cut(s)	435
XspI	CTAG	5 cut(s)	797, 882, 1823, 1907, 2147
Zsp2I	ATGCAT	2 cut(s)	1141, 1633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.