Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001036

Physical Location & Seq

Genomic Coordinates Forward (+)

36561453 .. 36565311

Gene Structure 3859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002578

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGAAGGGAGCTGCGCTTGTGGCTTTTGCTGCTACAATTGGTAACTTTCTGCAAGGATGGGACAATGCTACAATTGCTGGGGCTATTGTTTACATCACGGACGATTTTGATTTAAGTAGCTCGGTAGAAGGTCTTGTTGTGGCCATGTCGCTCATAGGGCAACAGCCAATGCTAATAGCATCATCAGTTCTTTATTATGTGAGTGGCTTGGTGATGTTGTGGTCACCCAATGTGTATGTACTATGTCTTGCAAGGCTATTAGATGGATTTGGAATTGGTTTAGCGGTTACTCTTGTCCCAGTCTACATATCCGAGACCGCCCCATCAGATATAAGGGGATTGTTGAATACTCTTCCACAGTTCCTTGGTTCAGGAGGCATGTTTTTGTCATATTGTATGGTTTTCGGGATGTCGCTGTTGGCCTCGCCAAGCTGGAGACTGATGCTTGCGATTCTTTCCATTCTCTCTCTTATATATCTTGTATTAACCGTGTTTTACTTACCTGAATCTCCTCGATGGCTTGTGAGTAAGGGCAGGATGCTCGAGGCAAAGAAGGTTCTCCAGAGCTTGCATGGCACTGAAGATGTTTCTGGTGAGATGGCTTTGCTTGTCGAAGGTCTTGGAGTTGGAGGTGAAACATCTTTAGAAGAGTACATCATATGCCCAGCTGATGATCTTGATGGTCAGGAAACAGCTGACAAAGACAAAATGAGGTTATATGGACCCGAAGAGGTCCTTTCCTGGGTTGCCAGACCTGTAACTGGGCAGGGTTCTTTTGTCAGTCTTGTCTCTCGCCAAGGAAGCTTGGCAACCCAGAATGTGCCTCTAATGGATCCTCTTGTCATTCTCTTTTGTAGTGTCCATGAAAACTTCCCAGAGGCAGGGAGTACGCGGGGAAGCATGCTCTTTTCTAACTTTGGCAGCATGTTCAGCACAGCAGATCATCCACGGGGTAAAACTGAACAATGGGATGAAGAGAGCTTGCATAGGGAAGGTGAGGACTATGCATCTGGAGGAGACTCAGATGACAATCTGCATAGTCCTTTGATTTCACGCCAGTCGACAATTATGGAAAAGGATATGGTGCCACCTCCTCCTTCCCATGGTAGTATTCTAGGCATGAGGCGCAACAGCAGTCTCATTCAAGGAACTGGGGAGACAGTTGGTAGCACAGGCATTGGTGGTGGGTGGCAGTTGGCATGGAAATGGTCTGAGAGACAAGGCGAGGATGGAAAGAAGGAAGGAGGATTCCAGAGGGTATATTTGCACCAGGAAGGAGTCCCTGGCTCACGTTGTGGGTCCCTTGTGTCACTTCCTGGTGGTGATGTTCCTGCAGAAGGCGAGTTCATCCAGGCAGCCGCTCTGGTCTGTCAGCCAGCTCTGTATTCGAAGTCACTTATCGATCAGCATCCTGTTGGACCTGCAATGGTTCATCCATCAGAAACAGCTTCGAAAGGACCAATATGGGCTGCTCTGCTTGAACCAGGGGTTAAGCACGCATTGTTTGTTGGAACTGGAATCCAGATTCTTCAGCAGTTTTCTGGGATAAACGGAGTTCTCTATTACACTACTCAAATTCTTGAAGAGGCTGGAGTCTCAGTTCTTCTTGAAAGCTTTGGTCTCAGTACAACGTCTGCATCTTTCCTCATCAGTGCATTCACAACTTTGTTGATTCTTCCTTGTATAGGTCTAGCCATGAAGCTCATGGATATCACTGGTAGAAGGATCCTGCTACTGACTACACTTCCTGTGTTGATTGTGTCACTCATTCTTCTAGTCATTGCCAACTTGGTGACCCTAAGTTCAGTCGTTGAAGCCGCAATATCAACCACTTGTGTGATAGTCTATTTCTGTGTCTTTGTCACGGCCTATGGGCCAATCCCAAATATCCTCTGCTCCGAGATCTTTCCGACAAGGGTGCGTGGCGTCTGCATTGCCATCTGTGCCCTGGCGTACTGGATTTCAGACATTATCGTCACCTACACGCTGCCAGTTCTTCTTGATTCAATAGGCCTAGCTGGTATCTTTGGGATTTATGCCGTTGTTTGTGTCATCTCTTTGGTGTTTATCTACTTGAAAGTTCCAGAAACCAAAGGCATGCCCCTTGAAGTCATTGCTGAATTCTTTTCTGTTGGTGCAAGACATTGCTGCTGCCAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009605 GO:0009607 GO:0009624 GO:0009705 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

721

Amino Acids

77.21

Weight (kDa)

4.87

Isoelectric Point (pI)

37.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	13 - 177	6.1e-11	Major Facilitator Superfamily
Sugar_tr	PF00083	49 - 205	4.2e-38	Sugar (and other) transporter
Sugar_tr	PF00083	488 - 709	7.4e-39	Sugar (and other) transporter
MFS_1	PF07690	534 - 698	1.8e-08	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300
fragaria_vesca	FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950
malus_domestica	MD05G1139800.v1.1 MD06G1005100.v1.1 MD10G1142100.v1.1
prunus_persica	Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1
pyrus_communis	pycom05g13500 pycom10g12180
rosa_chinensis	RchiOBHm_Chr6g0280981 RchiOBHm_Chr7g0216501
rosa_laevigata	RLG00000002567 RLG00000002578 RLG00000013010
rosa_multiflora	Rmu_sc0000692.1_g000001 Rmu_sc0030247.1_g000002 Rmu_sc0030424.1_g000003 Rmu_sc0034915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243170 Rroxscaffold_7G00187430
rosa_rugosa	Rorug06G0137300 Rorug06G0137400 Rorug06G0137500 Rorug07G0160700
rosa_samantha	Rh6AG249900 Rh6CG252500 Rh7BG291500 Rh7DG301100
rosa_wichuraiana	Rw6G021600 Rw7G025360 Rw7G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1973
Acc36I	ACCTGC	1 cut(s)	1429
AccB1I	GGYRCC	1 cut(s)	1084
AccBSI	CCGCTC	1 cut(s)	1361
AccI	GTMKAC	2 cut(s)	303, 1061
AccII	CGCG	1 cut(s)	892
AciI	CCGC	5 cut(s)	284, 318, 892, 1359, 1818
AclWI	GGATC	4 cut(s)	827, 840, 1720, 1733
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	2 cut(s)	1575, 2120
AcuI	CTGAAG	2 cut(s)	600, 1514
AcyI	GRCGYC	1 cut(s)	1926
AdeI	CACNNNGTG	1 cut(s)	1295
AfaI	GTAC	5 cut(s)	240, 653, 889, 1627, 1955
AfiI	CCNNNNNNNGG	6 cut(s)	742, 761, 881, 1103, 1337, 1685
AgsI	TTSAA	9 cut(s)	346, 1145, 1481, 1583, 1610, 1814, 2007, 2077, 2108
AjnI	CCWGG	7 cut(s)	740, 1269, 1282, 1315, 1350, 1483, 1947
AleI	CACNNNNGTG	1 cut(s)	1835
AloI	GAACNNNNNNTCC	2 cut(s)	1584, 1616
Alw26I	GTCTC	9 cut(s)	308, 430, 793, 1011, 1142, 1151, 1210, 1600, 1625
AlwI	GGATC	4 cut(s)	827, 840, 1720, 1733
Ama87I	CYCGRG	1 cut(s)	542
AoxI	GGCC	5 cut(s)	141, 420, 1866, 1874, 2011
ApeKI	GCWGC	8 cut(s)	11, 29, 921, 1355, 1469, 1987, 2148, 2151
ApoI	RAATTY	2 cut(s)	1575, 2120
AspLEI	GCGC	2 cut(s)	16, 1128
AspS9I	GGNCC	6 cut(s)	722, 733, 1299, 1418, 1457, 1874
AsuHPI	GGTGA	8 cut(s)	216, 223, 605, 644, 1007, 1334, 1804, 1969
AsuII	TTCGAA	2 cut(s)	1388, 1451
AvaI	CYCGRG	1 cut(s)	542
AvaII	GGWCC	5 cut(s)	722, 733, 1299, 1418, 1457
BaeGI	GKGCMC	1 cut(s)	1948
BalI	TGGCCA	1 cut(s)	143
BamHI	GGATCC	2 cut(s)	832, 1725
BanI	GGYRCC	1 cut(s)	1084
BbvI	GCAGC	7 cut(s)	16, 933, 1367, 1456, 1974, 2135, 2138
BccI	CCATC	9 cut(s)	51, 257, 331, 510, 592, 674, 1223, 1444, 1946
BceAI	ACGGC	2 cut(s)	1881, 2024
BcgI	CGANNNNNNTGC	4 cut(s)	523, 557, 1900, 1934
BciT130I	CCWGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
BcoDI	GTCTC	9 cut(s)	308, 430, 793, 1011, 1142, 1151, 1210, 1600, 1625
BfaI	CTAG	4 cut(s)	1115, 1691, 1775, 2015
BfmI	CTRYAG	1 cut(s)	1332
BfuAI	ACCTGC	1 cut(s)	1429
BglII	AGATCT	1 cut(s)	1902
Bme1390I	CCNGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
Bme18I	GGWCC	5 cut(s)	722, 733, 1299, 1418, 1457
BmeT110I	CYCGRG	1 cut(s)	542
BmgT120I	GGNCC	6 cut(s)	722, 733, 1299, 1418, 1457, 1874
BmiI	GGNNCC	6 cut(s)	724, 834, 1086, 1300, 1301, 1727
BmrFI	CCNGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
BmrI	ACTGGG	3 cut(s)	293, 771, 1161
BmsI	GCATC	6 cut(s)	188, 432, 528, 1016, 1417, 1646
BmuI	ACTGGG	3 cut(s)	293, 771, 1161
BpmI	CTGGAG	4 cut(s)	454, 545, 1032, 1611
Bpu14I	TTCGAA	2 cut(s)	1388, 1451
Bsa29I	ATCGAT	1 cut(s)	1401
BsaBI	GATNNNNATC	2 cut(s)	1029, 1407
BsaHI	GRCGYC	1 cut(s)	1926
BsaI	GGTCTC	2 cut(s)	308, 1625
BsaJI	CCNNGG	8 cut(s)	364, 741, 796, 947, 1102, 1282, 1484, 1947
BsaXI	ACNNNNNCTCC	2 cut(s)	1584, 1614
Bsc4I	CCNNNNNNNGG	6 cut(s)	742, 761, 881, 1103, 1337, 1685
Bse1I	ACTGG	8 cut(s)	299, 766, 1057, 1156, 1519, 1720, 1961, 1991
Bse3DI	GCAATG	5 cut(s)	1431, 1779, 1932, 2112, 2143
Bse8I	GATNNNNATC	2 cut(s)	1029, 1407
BseBI	CCWGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
BseCI	ATCGAT	1 cut(s)	1401
BseDI	CCNNGG	8 cut(s)	364, 741, 796, 947, 1102, 1282, 1484, 1947
BseGI	GGATG	9 cut(s)	62, 414, 543, 943, 976, 1234, 1347, 1408, 1432
BseJI	GATNNNNATC	2 cut(s)	1029, 1407
BseLI	CCNNNNNNNGG	6 cut(s)	742, 761, 881, 1103, 1337, 1685
BseMI	GCAATG	5 cut(s)	1431, 1779, 1932, 2112, 2143
BseMII	CTCAG	4 cut(s)	1035, 1203, 1611, 1636
BseNI	ACTGG	8 cut(s)	299, 766, 1057, 1156, 1519, 1720, 1961, 1991
BseRI	GAGGAG	3 cut(s)	501, 1029, 1083
BseSI	GKGCMC	1 cut(s)	1948
BseXI	GCAGC	7 cut(s)	16, 933, 1367, 1456, 1974, 2135, 2138
BseYI	CCCAGC	2 cut(s)	77, 664
Bsh1236I	CGCG	1 cut(s)	892
BshFI	GGCC	5 cut(s)	143, 422, 1868, 1876, 2013
BshNI	GGYRCC	1 cut(s)	1084
BshVI	ATCGAT	1 cut(s)	1401
BsiHKCI	CYCGRG	1 cut(s)	542
BslFI	GGGAC	4 cut(s)	74, 281, 1265, 1285
BslI	CCNNNNNNNGG	6 cut(s)	742, 761, 881, 1103, 1337, 1685
BsmAI	GTCTC	9 cut(s)	308, 430, 793, 1011, 1142, 1151, 1210, 1600, 1625
BsmFI	GGGAC	4 cut(s)	74, 281, 1265, 1285
BsmI	GAATGC	1 cut(s)	1655
BsnI	GGCC	5 cut(s)	143, 422, 1868, 1876, 2013
Bso31I	GGTCTC	2 cut(s)	308, 1625
BsoBI	CYCGRG	1 cut(s)	542
Bsp119I	TTCGAA	2 cut(s)	1388, 1451
Bsp1286I	GDGCHC	1 cut(s)	1948
Bsp143I	GATC	6 cut(s)	673, 832, 940, 1402, 1725, 1902
Bsp19I	CCATGG	1 cut(s)	1102
BspACI	CCGC	5 cut(s)	284, 318, 892, 1359, 1818
BspANI	GGCC	5 cut(s)	143, 422, 1868, 1876, 2013
BspCNI	CTCAG	4 cut(s)	1034, 1204, 1610, 1635
BspDI	ATCGAT	1 cut(s)	1401
BspFNI	CGCG	1 cut(s)	892
BspLI	GGNNCC	6 cut(s)	724, 834, 1086, 1300, 1301, 1727
BspMAI	CTGCAG	1 cut(s)	1336
BspMI	ACCTGC	1 cut(s)	1429
BspPI	GGATC	4 cut(s)	827, 840, 1720, 1733
BspT104I	TTCGAA	2 cut(s)	1388, 1451
BspT107I	GGYRCC	1 cut(s)	1084
BspTNI	GGTCTC	2 cut(s)	308, 1625
BsrBI	CCGCTC	1 cut(s)	1361
BsrDI	GCAATG	5 cut(s)	1431, 1779, 1932, 2112, 2143
BsrI	ACTGG	8 cut(s)	299, 766, 1057, 1156, 1519, 1720, 1961, 1991
BssECI	CCNNGG	8 cut(s)	364, 741, 796, 947, 1102, 1282, 1484, 1947
BssMI	GATC	6 cut(s)	673, 832, 940, 1402, 1725, 1902
BssNI	GRCGYC	1 cut(s)	1926
BssT1I	CCWWGG	3 cut(s)	364, 796, 1102
Bst2UI	CCWGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
Bst4CI	ACNGT	3 cut(s)	360, 490, 1162
Bst6I	CTCTTC	5 cut(s)	357, 642, 723, 969, 1578
BstACI	GRCGYC	1 cut(s)	1926
BstBI	TTCGAA	2 cut(s)	1388, 1451
BstC8I	GCNNGC	7 cut(s)	447, 569, 902, 983, 1377, 1497, 2099
BstDEI	CTNAG	5 cut(s)	1021, 1212, 1597, 1622, 1799
BstDSI	CCRYGG	2 cut(s)	947, 1102
BstEII	GGTNACC	2 cut(s)	222, 1792
BstENI	CCTNNNNNAGG	2 cut(s)	1335, 1683
BstF5I	GGATG	9 cut(s)	62, 414, 543, 943, 976, 1234, 1347, 1408, 1432
BstFNI	CGCG	1 cut(s)	892
BstHHI	GCGC	2 cut(s)	16, 1128
BstKTI	GATC	6 cut(s)	676, 835, 943, 1405, 1728, 1905
BstMAI	GTCTC	9 cut(s)	308, 430, 793, 1011, 1142, 1151, 1210, 1600, 1625
BstMBI	GATC	6 cut(s)	673, 832, 940, 1402, 1725, 1902
BstMWI	GCNNNNNNNGC	9 cut(s)	20, 29, 74, 157, 573, 801, 930, 1125, 1943
BstNI	CCWGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
BstNSI	RCATGY	4 cut(s)	382, 904, 928, 2101
BstPI	GGTNACC	2 cut(s)	222, 1792
BstSCI	CCNGG	7 cut(s)	740, 1269, 1282, 1315, 1350, 1483, 1947
BstSFI	CTRYAG	1 cut(s)	1332
BstSLI	GKGCMC	1 cut(s)	1948
BstUI	CGCG	1 cut(s)	892
BstV1I	GCAGC	7 cut(s)	16, 933, 1367, 1456, 1974, 2135, 2138
BstX2I	RGATCY	3 cut(s)	832, 1725, 1902
BstYI	RGATCY	3 cut(s)	832, 1725, 1902
Bsu15I	ATCGAT	1 cut(s)	1401
BsuRI	GGCC	5 cut(s)	143, 422, 1868, 1876, 2013
BsuTUI	ATCGAT	1 cut(s)	1401
BtgI	CCRYGG	2 cut(s)	947, 1102
BtsCI	GGATG	9 cut(s)	62, 414, 543, 943, 976, 1234, 1347, 1408, 1432
BtsIMutI	CAGTG	3 cut(s)	576, 1657, 1713
BveI	ACCTGC	1 cut(s)	1429
Cac8I	GCNNGC	7 cut(s)	447, 569, 902, 983, 1377, 1497, 2099
CfoI	GCGC	2 cut(s)	16, 1128
Cfr13I	GGNCC	6 cut(s)	722, 733, 1299, 1418, 1457, 1874
ClaI	ATCGAT	1 cut(s)	1401
CseI	GACGC	1 cut(s)	1915
Csp6I	GTAC	5 cut(s)	239, 652, 888, 1626, 1954
CviQI	GTAC	5 cut(s)	239, 652, 888, 1626, 1954
DdeI	CTNAG	5 cut(s)	1021, 1212, 1597, 1622, 1799
DpnI	GATC	6 cut(s)	675, 834, 942, 1404, 1727, 1904
DpnII	GATC	6 cut(s)	673, 832, 940, 1402, 1725, 1902
DraIII	CACNNNGTG	1 cut(s)	1295
DrdI	GACNNNNNNGTC	1 cut(s)	1973
DseDI	GACNNNNNNGTC	1 cut(s)	1973
EaeI	YGGCCR	1 cut(s)	141
Eam1104I	CTCTTC	5 cut(s)	357, 642, 723, 969, 1578
EarI	CTCTTC	5 cut(s)	357, 642, 723, 969, 1578
Eco130I	CCWWGG	3 cut(s)	364, 796, 1102
Eco147I	AGGCCT	1 cut(s)	2013
Eco31I	GGTCTC	2 cut(s)	308, 1625
Eco32I	GATATC	1 cut(s)	1711
Eco47I	GGWCC	5 cut(s)	722, 733, 1299, 1418, 1457
Eco57I	CTGAAG	2 cut(s)	600, 1514
Eco88I	CYCGRG	1 cut(s)	542
Eco91I	GGTNACC	2 cut(s)	222, 1792
EcoNI	CCTNNNNNAGG	2 cut(s)	1335, 1683
EcoO109I	RGGNCCY	2 cut(s)	733, 1299
EcoO65I	GGTNACC	2 cut(s)	222, 1792
EcoRI	GAATTC	1 cut(s)	2120
EcoRII	CCWGG	7 cut(s)	740, 1269, 1282, 1315, 1350, 1483, 1947
EcoRV	GATATC	1 cut(s)	1711
EcoT14I	CCWWGG	3 cut(s)	364, 796, 1102
EcoT22I	ATGCAT	1 cut(s)	1009
ErhI	CCWWGG	3 cut(s)	364, 796, 1102
FalI	AAGNNNNNCTT	2 cut(s)	720, 752
FaqI	GGGAC	4 cut(s)	74, 281, 1265, 1285
FauI	CCCGC	1 cut(s)	885
FauNDI	CATATG	1 cut(s)	659
FblI	GTMKAC	2 cut(s)	303, 1061
FokI	GGATG	9 cut(s)	69, 421, 550, 930, 983, 1241, 1334, 1395, 1419
FspBI	CTAG	4 cut(s)	1115, 1691, 1775, 2015
GlaI	GCGC	2 cut(s)	15, 1127
GsaI	CCCAGC	2 cut(s)	81, 668
GsuI	CTGGAG	4 cut(s)	454, 545, 1032, 1611
HaeIII	GGCC	5 cut(s)	143, 422, 1868, 1876, 2013
HgaI	GACGC	1 cut(s)	1915
HhaI	GCGC	2 cut(s)	16, 1128
Hin1I	GRCGYC	1 cut(s)	1926
Hin6I	GCGC	2 cut(s)	14, 1126
HinP1I	GCGC	2 cut(s)	14, 1126
HincII	GTYRAC	1 cut(s)	1062
HindII	GTYRAC	1 cut(s)	1062
HindIII	AAGCTT	2 cut(s)	802, 1612
HphI	GGTGA	8 cut(s)	216, 223, 605, 644, 1007, 1334, 1804, 1969
Hpy166II	GTNNAC	3 cut(s)	91, 304, 1062
Hpy188I	TCNGA	8 cut(s)	313, 328, 1024, 1213, 1441, 1900, 1911, 1966
Hpy8I	GTNNAC	3 cut(s)	91, 304, 1062
HpyCH4III	ACNGT	3 cut(s)	360, 490, 1162
HpyCH4IV	ACGT	2 cut(s)	1291, 1631
HpyF10VI	GCNNNNNNNGC	9 cut(s)	20, 29, 74, 157, 573, 801, 930, 1125, 1943
HpyF3I	CTNAG	5 cut(s)	1021, 1212, 1597, 1622, 1799
HpySE526I	ACGT	2 cut(s)	1291, 1631
Hsp92I	GRCGYC	1 cut(s)	1926
HspAI	GCGC	2 cut(s)	14, 1126
KflI	GGGWCCC	1 cut(s)	1299
Kzo9I	GATC	6 cut(s)	673, 832, 940, 1402, 1725, 1902
LmnI	GCTCC	2 cut(s)	8, 1901
Lsp1109I	GCAGC	7 cut(s)	16, 933, 1367, 1456, 1974, 2135, 2138
LweI	GCATC	6 cut(s)	188, 432, 528, 1016, 1417, 1646
MaeI	CTAG	4 cut(s)	1115, 1691, 1775, 2015
MaeII	ACGT	2 cut(s)	1291, 1631
MalI	GATC	6 cut(s)	675, 834, 942, 1404, 1727, 1904
MbiI	CCGCTC	1 cut(s)	1361
MboI	GATC	6 cut(s)	673, 832, 940, 1402, 1725, 1902
MfeI	CAATTG	2 cut(s)	36, 72
MflI	RGATCY	3 cut(s)	832, 1725, 1902
MhlI	GDGCHC	1 cut(s)	1948
MlsI	TGGCCA	1 cut(s)	143
MluCI	AATT	6 cut(s)	36, 72, 273, 1065, 1575, 2120
MluNI	TGGCCA	1 cut(s)	143
MlyI	GAGTC	3 cut(s)	1013, 1287, 1602
MmeI	TCCRAC	4 cut(s)	607, 1396, 1489, 1934
Mox20I	TGGCCA	1 cut(s)	143
Mph1103I	ATGCAT	1 cut(s)	1009
MscI	TGGCCA	1 cut(s)	143
MseI	TTAA	3 cut(s)	113, 485, 1491
MslI	CAYNNNNRTG	2 cut(s)	1204, 1835
Msp20I	TGGCCA	1 cut(s)	143
MspA1I	CMGCKG	2 cut(s)	668, 695
MspR9I	CCNGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
MunI	CAATTG	2 cut(s)	36, 72
Mva1269I	GAATGC	1 cut(s)	1655
MvaI	CCWGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
MvnI	CGCG	1 cut(s)	892
MwoI	GCNNNNNNNGC	9 cut(s)	20, 29, 74, 157, 573, 801, 930, 1125, 1943
NcoI	CCATGG	1 cut(s)	1102
NdeI	CATATG	1 cut(s)	659
NdeII	GATC	6 cut(s)	673, 832, 940, 1402, 1725, 1902
NlaIV	GGNNCC	6 cut(s)	724, 834, 1086, 1300, 1301, 1727
NmuCI	GTSAC	7 cut(s)	222, 1308, 1392, 1761, 1792, 1861, 1975
NsiI	ATGCAT	1 cut(s)	1009
NspI	RCATGY	4 cut(s)	382, 904, 928, 2101
NspV	TTCGAA	2 cut(s)	1388, 1451
OliI	CACNNNNGTG	1 cut(s)	1835
PaeI	GCATGC	2 cut(s)	904, 2101
PaeR7I	CTCGAG	1 cut(s)	542
PceI	AGGCCT	1 cut(s)	2013
PctI	GAATGC	1 cut(s)	1655
PfeI	GAWTC	7 cut(s)	451, 506, 1248, 1518, 1525, 1672, 2003
PleI	GAGTC	3 cut(s)	1013, 1286, 1601
PpsI	GAGTC	3 cut(s)	1013, 1286, 1601
PpuMI	RGGWCCY	2 cut(s)	733, 1299
Psp5II	RGGWCCY	2 cut(s)	733, 1299
Psp6I	CCWGG	7 cut(s)	740, 1269, 1282, 1315, 1350, 1483, 1947
PspEI	GGTNACC	2 cut(s)	222, 1792
PspFI	CCCAGC	2 cut(s)	77, 664
PspGI	CCWGG	7 cut(s)	740, 1269, 1282, 1315, 1350, 1483, 1947
PspN4I	GGNNCC	6 cut(s)	724, 834, 1086, 1300, 1301, 1727
PspPI	GGNCC	6 cut(s)	722, 733, 1299, 1418, 1457, 1874
PspPPI	RGGWCCY	2 cut(s)	733, 1299
PspXI	VCTCGAGB	1 cut(s)	542
PstI	CTGCAG	1 cut(s)	1336
PsuI	RGATCY	3 cut(s)	832, 1725, 1902
PvuII	CAGCTG	2 cut(s)	668, 695
RsaI	GTAC	5 cut(s)	240, 653, 889, 1627, 1955
RsaNI	GTAC	5 cut(s)	239, 652, 888, 1626, 1954
RseI	CAYNNNNRTG	2 cut(s)	1204, 1835
SalI	GTCGAC	1 cut(s)	1060
SaqAI	TTAA	3 cut(s)	113, 485, 1491
Sau3AI	GATC	6 cut(s)	673, 832, 940, 1402, 1725, 1902
Sau96I	GGNCC	6 cut(s)	722, 733, 1299, 1418, 1457, 1874
SchI	GAGTC	3 cut(s)	1013, 1287, 1602
ScrFI	CCNGG	7 cut(s)	742, 1271, 1284, 1317, 1352, 1485, 1949
SduI	GDGCHC	1 cut(s)	1948
SfaNI	GCATC	6 cut(s)	188, 432, 528, 1016, 1417, 1646
SfcI	CTRYAG	1 cut(s)	1332
Sfr274I	CTCGAG	1 cut(s)	542
SfuI	TTCGAA	2 cut(s)	1388, 1451
SinI	GGWCC	5 cut(s)	722, 733, 1299, 1418, 1457
SlaI	CTCGAG	1 cut(s)	542
SmiMI	CAYNNNNRTG	2 cut(s)	1204, 1835
SmlI	CTYRAG	1 cut(s)	542
SmoI	CTYRAG	1 cut(s)	542
SphI	GCATGC	2 cut(s)	904, 2101
Sse9I	AATT	6 cut(s)	36, 72, 273, 1065, 1575, 2120
SseBI	AGGCCT	1 cut(s)	2013
SsiI	CCGC	5 cut(s)	284, 318, 892, 1359, 1818
SspMI	CTAG	4 cut(s)	1115, 1691, 1775, 2015
StuI	AGGCCT	1 cut(s)	2013
StyD4I	CCNGG	7 cut(s)	740, 1269, 1282, 1315, 1350, 1483, 1947
StyI	CCWWGG	3 cut(s)	364, 796, 1102
TaaI	ACNGT	3 cut(s)	360, 490, 1162
TaiI	ACGT	2 cut(s)	1294, 1634
TaqI	TCGA	7 cut(s)	514, 543, 612, 1061, 1388, 1401, 1451
TasI	AATT	6 cut(s)	36, 72, 273, 1065, 1575, 2120
TatI	WGTACW	3 cut(s)	238, 651, 1625
TauI	GCSGC	2 cut(s)	1361, 1820
TfiI	GAWTC	7 cut(s)	451, 506, 1248, 1518, 1525, 1672, 2003
Tru1I	TTAA	3 cut(s)	113, 485, 1491
Tru9I	TTAA	3 cut(s)	113, 485, 1491
TscAI	CASTG	3 cut(s)	583, 1657, 1720
TseFI	GTSAC	7 cut(s)	222, 1308, 1392, 1761, 1792, 1861, 1975
TseI	GCWGC	8 cut(s)	11, 29, 921, 1355, 1469, 1987, 2148, 2151
Tsp45I	GTSAC	7 cut(s)	222, 1308, 1392, 1761, 1792, 1861, 1975
TspDTI	ATGAA	6 cut(s)	17, 879, 987, 1336, 1421, 1712
TspGWI	ACGGA	2 cut(s)	113, 1566
TspRI	CASTG	3 cut(s)	583, 1657, 1720
VpaK11BI	GGWCC	5 cut(s)	722, 733, 1299, 1418, 1457
XagI	CCTNNNNNAGG	2 cut(s)	1335, 1683
XapI	RAATTY	2 cut(s)	1575, 2120
XceI	RCATGY	4 cut(s)	382, 904, 928, 2101
XcmI	CCANNNNNNNNNTGG	3 cut(s)	569, 1702, 1945
XhoI	CTCGAG	1 cut(s)	542
XmiI	GTMKAC	2 cut(s)	303, 1061
XspI	CTAG	4 cut(s)	1115, 1691, 1775, 2015
Zsp2I	ATGCAT	1 cut(s)	1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.