Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0001036

Physical Location & Seq

Genomic Coordinates Forward (+)

574883 .. 580734

Gene Structure 5852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1005100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGAAGAAGGGAGCCGTGCTGGTGGCTATTGCTGCTACAATTGGTAACCTCCTGCAAGGATGGGATAATGCCACAATTGCCGGGGCTATTGTTTACATAACGAAAGAATTCGACTTGGGGAGTTCTTTGGAAGGCCTTGTTGTGGCCATGTCACTCATCGGAGCAACAATTATTACAACTTGCTCAGGAGCCATATCAGATTGGATTGGTCGGCGGCCAATGTTAATAGCATCCTCAGTCTTTTATTTTGTGAGTGGTTTGGTAATGGTGTGGTCACCCAATGTCTATGTACTATGTATAGCAAGGCTGTTAGATGGATTTGGAATCGGCCTAGCAGTTACTCTCATCCCACTCTATATATCTGAAACTGCCCCACCAGATATAAGGGGATCCTTGAATACTCTTCCGCAGTTCCTTGGTTCAGGCGGCCTGTTTCTGTCCTATTGTATGGTTTTTGGGATGTCACTGATGGACTCACCAAGCTGGAGATTGATGCTTGGGGTTCTTTCCATCCCCTCTTTGATCTACTTTGGGTTAACAGTGTTTTACTTGCCTGAATCTCCTCGATGGCTTGTGAGTAAGGGCAGGATGCTTGAGGCAAAGATTGTTCTCCAGCAGTTACGTGGCACTGAAGATGTTTCTGGTGAACTGGCTTTGCTGGTCGAAGGTCTTGGAATTGGGGGTGAAACATCAATAGAAGAGTACATAATAGGCCCAGCTGATGAGCTTGGCGATAGTCAGGATCCAGCTGACAAAGATAAAATCAAGTTATATGGACCTGAAGAAGGCCTTTCCTGGGTTGCCAGACCTGTCACCGGACAGGGTTCTCTTATTAGTCTTGTTTCTCGCCAAGGAAGCATGGTAAACCAGGGCGTGCCTTTAATGGACCCTCTTGTCACTCTGTTTGGTAGTGTTCATGAAAATTTCCCAGAGACTGCAAGTACCCGAAGCATGCTTTTCCCTAATTTTGGCAGCATGTTCAGCACAGCAGATCGGCCTAAGACTGACCAATGGGATGAAGAGAGTTTGCACGGGGAAGGTGAGGGCTATGGATCTGATGGTGCTGGGGGAGACTCAGATGACAATTTGCATAGTCCATTGATTTCACGTCAGGCAACAAGTCTGGAAAAGGATTTAGTGCCCCCTGCTTCCCATGGCAGTGCTCTAAGCATGAGGCGGCACAGCAGTCTCATGCAAGGAACAGGGGAGACATCTGGCAGCACAGGCATCGGTGGCGGATGGCAGTTGGCATGGAAGTGGTCTGAGAGAGAAGGCGAGGATGGAAAGAAGGAAGGAGGATTTAAAAGGGTATATTTGCATCAGGAGGGAGGCCCAGGCTCCCGTCGTGGGTCCCTTGTGTCACTTCCTGGTGCTGATGTTCCTACAGAAGGTGAGTTTATCCAGGCTGCTGCTCTGGTTAGTCAGCCGGCTCTTTATTCGAAAGAGCTCATGGATAAGCATCCTGTTGGACCTGCAATGGTTCATCCAGCAGAAACAGCTTCAAAAGGACCAATATGGGCTGCTCTGCTTGAACCAGGAGTTAAGCATGCATTGTTAGTTGGAATGGGAATCCAGATTCTCCAGCAGTTTTCTGGCATAAATGGGGTTCTCTACTACACTCCTCAAATTCTTGAAGAGGCAGGCGTTGAAGTACTTCTTTCAGACTTGGGTCTCAGTTCAACGTCTTCATCCTTCCTTATAAGTGCATTCACAACATTGTTGATGCTTCCTTGTATAGCTTTGGCCATAAAGCTCATGGATATCACTGGTCGAAGGATGCTGCTGCTGACTACGATTCCAGTGTTGATAGTAGCACTCATCATTCTCGTGGTTACCAACCTTTTGACCTTGGGTTCAGTTCTTCATGCAGTACTATCAACCACTTGTGTTATCGTCTATTTCTGCGTCTTTGTCATGGCGTATGGGCCAATTCCAAATATCCTGTGCTCCGAAATATTTCCCACAAGGGTGCGTGGCCTGTGCATTGCCATCTGCGCCTTGGTGTACTGGATTGGGGACATCATCGTCACTTACTCGCTACCTGTGATGCTTGATTCAATGGGCCTATCCGGTGCCTTTGGGATTTACGCAGCGGTTTGTGTCATTTCTTTTGTATTCATCTTCTTGAAGGTTCCGGAAACCAAAGGCATGCCCCTCGAAGTCATCACCGAGTTCTTTTCTGTTGGTGCAAGACAAGTTGCGGCTGCCAAAAACGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009605 GO:0009607 GO:0009624 GO:0009705 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

740

Amino Acids

78.86

Weight (kDa)

4.96

Isoelectric Point (pI)

35.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	8 - 220	6.4e-49	Sugar (and other) transporter
MFS_1	PF07690	14 - 197	1.1e-20	Major Facilitator Superfamily
Sugar_tr	PF00083	505 - 726	2.2e-40	Sugar (and other) transporter
MFS_1	PF07690	551 - 715	8.3e-07	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300
fragaria_vesca	FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950
malus_domestica	MD05G1139800.v1.1 MD06G1005100.v1.1 MD10G1142100.v1.1
prunus_persica	Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1
pyrus_communis	pycom05g13500 pycom10g12180
rosa_chinensis	RchiOBHm_Chr6g0280981 RchiOBHm_Chr7g0216501
rosa_laevigata	RLG00000002567 RLG00000002578 RLG00000013010
rosa_multiflora	Rmu_sc0000692.1_g000001 Rmu_sc0030247.1_g000002 Rmu_sc0030424.1_g000003 Rmu_sc0034915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243170 Rroxscaffold_7G00187430
rosa_rugosa	Rorug06G0137300 Rorug06G0137400 Rorug06G0137500 Rorug07G0160700
rosa_samantha	Rh6AG249900 Rh6CG252500 Rh7BG291500 Rh7DG301100
rosa_wichuraiana	Rw6G021600 Rw7G025360 Rw7G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1700
AasI	GACNNNNNNGTC	2 cut(s)	893, 2024
Acc36I	ACCTGC	1 cut(s)	1480
AccB1I	GGYRCC	1 cut(s)	2072
AccIII	TCCGGA	1 cut(s)	2134
AciI	CCGC	7 cut(s)	214, 407, 426, 1177, 1236, 2093, 2201
AclWI	GGATC	5 cut(s)	384, 397, 737, 750, 1060
AcoI	YGGCCR	3 cut(s)	144, 215, 1743
AcsI	RAATTY	3 cut(s)	107, 922, 1626
AcuI	CTGAAG	2 cut(s)	651, 801
AfaI	GTAC	6 cut(s)	291, 704, 943, 1653, 1872, 2006
AfiI	CCNNNNNNNGG	7 cut(s)	142, 785, 796, 815, 968, 1347, 1388
AgsI	TTSAA	8 cut(s)	397, 1503, 1532, 1634, 1649, 1680, 2058, 2128
AjiI	CACGTC	1 cut(s)	1109
AjnI	CCWGG	6 cut(s)	794, 867, 1333, 1366, 1401, 1534
AleI	CACNNNNGTG	1 cut(s)	1967
AluBI	AGCT	8 cut(s)	483, 719, 727, 749, 1447, 1499, 1739, 1753
AluI	AGCT	8 cut(s)	483, 719, 727, 749, 1447, 1499, 1739, 1753
Alw21I	GWGCWC	3 cut(s)	1165, 1449, 1949
Alw26I	GTCTC	5 cut(s)	926, 1065, 1193, 1202, 1676
AlwI	GGATC	5 cut(s)	384, 397, 737, 750, 1060
AlwNI	CAGNNNCTG	1 cut(s)	935
Aor13HI	TCCGGA	1 cut(s)	2134
ApoI	RAATTY	3 cut(s)	107, 922, 1626
Asp700I	GAANNNNTTC	3 cut(s)	107, 1653, 1956
AspLEI	GCGC	1 cut(s)	1997
AspS9I	GGNCC	9 cut(s)	713, 776, 886, 1331, 1350, 1469, 1508, 1925, 2062
AsuC2I	CCSGG	1 cut(s)	82
AsuHPI	GGTGA	8 cut(s)	267, 468, 656, 695, 805, 1052, 1403, 2158
AsuII	TTCGAA	1 cut(s)	1439
AvaII	GGWCC	5 cut(s)	776, 886, 1350, 1469, 1508
BaeGI	GKGCMC	1 cut(s)	1143
BalI	TGGCCA	2 cut(s)	146, 1745
BamHI	GGATCC	2 cut(s)	389, 742
BanI	GGYRCC	1 cut(s)	2072
BanII	GRGCYC	1 cut(s)	1449
BauI	CACGAG	1 cut(s)	1826
BbsI	GAAGAC	1 cut(s)	1677
Bbv12I	GWGCWC	3 cut(s)	1165, 1449, 1949
BccI	CCATC	9 cut(s)	54, 308, 463, 518, 561, 1052, 1233, 1274, 1997
BcgI	CGANNNNNNTGC	4 cut(s)	1210, 1244, 2137, 2171
BciT130I	CCWGG	6 cut(s)	796, 869, 1335, 1368, 1403, 1536
BcnI	CCSGG	1 cut(s)	82
BcoDI	GTCTC	5 cut(s)	926, 1065, 1193, 1202, 1676
BfaI	CTAG	1 cut(s)	332
BfmI	CTRYAG	1 cut(s)	1383
BfuAI	ACCTGC	1 cut(s)	1480
BmcAI	AGTACT	2 cut(s)	1653, 1872
Bme1390I	CCNGG	7 cut(s)	82, 796, 869, 1335, 1368, 1403, 1536
Bme18I	GGWCC	5 cut(s)	776, 886, 1350, 1469, 1508
BmgBI	CACGTC	1 cut(s)	1109
BmgT120I	GGNCC	9 cut(s)	713, 776, 886, 1331, 1350, 1469, 1508, 1925, 2062
BmrFI	CCNGG	7 cut(s)	82, 796, 869, 1335, 1368, 1403, 1536
BmsI	GCATC	9 cut(s)	239, 483, 579, 1236, 1327, 1468, 1713, 1767, 2037
BoxI	GACNNNNGTC	1 cut(s)	1668
BpiI	GAAGAC	1 cut(s)	1677
BpmI	CTGGAG	3 cut(s)	505, 596, 1565
Bpu10I	CCTNAGC	1 cut(s)	184
Bpu14I	TTCGAA	1 cut(s)	1439
BpuEI	CTTGAG	1 cut(s)	614
BpuMI	CCSGG	1 cut(s)	82
BsaAI	YACGTR	1 cut(s)	623
BsaBI	GATNNNNATC	1 cut(s)	1458
BsaI	GGTCTC	1 cut(s)	1676
BsaJI	CCNNGG	9 cut(s)	81, 415, 795, 850, 868, 1153, 1333, 1848, 1998
BsaWI	WCCGGW	3 cut(s)	815, 2069, 2134
Bsc4I	CCNNNNNNNGG	7 cut(s)	142, 785, 796, 815, 968, 1347, 1388
Bse118I	RCCGGY	1 cut(s)	1426
Bse1I	ACTGG	4 cut(s)	654, 1771, 1799, 2012
Bse3DI	GCAATG	2 cut(s)	1482, 1983
Bse8I	GATNNNNATC	1 cut(s)	1458
BseAI	TCCGGA	1 cut(s)	2134
BseBI	CCWGG	6 cut(s)	796, 869, 1335, 1368, 1403, 1536
BseDI	CCNNGG	9 cut(s)	81, 415, 795, 850, 868, 1153, 1333, 1848, 1998
BseJI	GATNNNNATC	1 cut(s)	1458
BseLI	CCNNNNNNNGG	7 cut(s)	142, 785, 796, 815, 968, 1347, 1388
BseMI	GCAATG	2 cut(s)	1482, 1983
BseMII	CTCAG	5 cut(s)	198, 249, 1089, 1254, 1687
BseNI	ACTGG	4 cut(s)	654, 1771, 1799, 2012
BseRI	GAGGAG	2 cut(s)	552, 1611
BseSI	GKGCMC	1 cut(s)	1143
BseYI	CCCAGC	2 cut(s)	715, 1064
BshNI	GGYRCC	1 cut(s)	2072
BsiHKAI	GWGCWC	3 cut(s)	1165, 1449, 1949
BsiSI	CCGG	5 cut(s)	81, 816, 1427, 2070, 2135
BslFI	GGGAC	2 cut(s)	1336, 2030
BslI	CCNNNNNNNGG	7 cut(s)	142, 785, 796, 815, 968, 1347, 1388
BsmAI	GTCTC	5 cut(s)	926, 1065, 1193, 1202, 1676
BsmFI	GGGAC	2 cut(s)	1336, 2030
BsmI	GAATGC	1 cut(s)	1706
Bso31I	GGTCTC	1 cut(s)	1676
Bsp119I	TTCGAA	1 cut(s)	1439
Bsp1286I	GDGCHC	4 cut(s)	1143, 1165, 1449, 1949
Bsp13I	TCCGGA	1 cut(s)	2134
Bsp143I	GATC	5 cut(s)	389, 522, 742, 991, 1052
Bsp19I	CCATGG	1 cut(s)	1153
BspACI	CCGC	7 cut(s)	214, 407, 426, 1177, 1236, 2093, 2201
BspCNI	CTCAG	5 cut(s)	197, 248, 1088, 1255, 1686
BspEI	TCCGGA	1 cut(s)	2134
BspHI	TCATGA	1 cut(s)	916
BspMI	ACCTGC	1 cut(s)	1480
BspPI	GGATC	5 cut(s)	384, 397, 737, 750, 1060
BspT104I	TTCGAA	1 cut(s)	1439
BspT107I	GGYRCC	1 cut(s)	2072
BspTNI	GGTCTC	1 cut(s)	1676
BsrDI	GCAATG	2 cut(s)	1482, 1983
BsrFI	RCCGGY	1 cut(s)	1426
BsrI	ACTGG	4 cut(s)	654, 1771, 1799, 2012
BssAI	RCCGGY	1 cut(s)	1426
BssECI	CCNNGG	9 cut(s)	81, 415, 795, 850, 868, 1153, 1333, 1848, 1998
BssMI	GATC	5 cut(s)	389, 522, 742, 991, 1052
BssSI	CACGAG	1 cut(s)	1826
BssT1I	CCWWGG	5 cut(s)	415, 850, 1153, 1848, 1998
Bst2BI	CACGAG	1 cut(s)	1826
Bst2UI	CCWGG	6 cut(s)	796, 869, 1335, 1368, 1403, 1536
Bst4CI	ACNGT	1 cut(s)	541
Bst6I	CTCTTC	4 cut(s)	408, 693, 1014, 1629
BstBAI	YACGTR	1 cut(s)	623
BstBI	TTCGAA	1 cut(s)	1439
BstC8I	GCNNGC	6 cut(s)	875, 953, 1428, 1548, 1642, 2150
BstDEI	CTNAG	7 cut(s)	184, 235, 999, 1075, 1166, 1263, 1673
BstDSI	CCRYGG	1 cut(s)	1153
BstEII	GGTNACC	3 cut(s)	44, 273, 1831
BstENI	CCTNNNNNAGG	2 cut(s)	783, 1386
BstHHI	GCGC	1 cut(s)	1997
BstKTI	GATC	5 cut(s)	392, 525, 745, 994, 1055
BstMAI	GTCTC	5 cut(s)	926, 1065, 1193, 1202, 1676
BstMBI	GATC	5 cut(s)	389, 522, 742, 991, 1052
BstMWI	GCNNNNNNNGC	8 cut(s)	32, 77, 855, 981, 1224, 1233, 1496, 1994
BstNI	CCWGG	6 cut(s)	796, 869, 1335, 1368, 1403, 1536
BstNSI	RCATGY	4 cut(s)	955, 979, 1550, 2152
BstPAI	GACNNNNGTC	1 cut(s)	1668
BstPI	GGTNACC	3 cut(s)	44, 273, 1831
BstSCI	CCNGG	7 cut(s)	80, 794, 867, 1333, 1366, 1401, 1534
BstSFI	CTRYAG	1 cut(s)	1383
BstSLI	GKGCMC	1 cut(s)	1143
BstV2I	GAAGAC	1 cut(s)	1677
BstX2I	RGATCY	3 cut(s)	389, 742, 1052
BstYI	RGATCY	3 cut(s)	389, 742, 1052
BtgI	CCRYGG	1 cut(s)	1153
BtrI	CACGTC	1 cut(s)	1109
BtsI	GCAGTG	1 cut(s)	1165
BtsIMutI	CAGTG	6 cut(s)	464, 546, 627, 1165, 1764, 1806
BveI	ACCTGC	1 cut(s)	1480
Cac8I	GCNNGC	6 cut(s)	875, 953, 1428, 1548, 1642, 2150
CaiI	CAGNNNCTG	1 cut(s)	935
CciI	TCATGA	1 cut(s)	916
CfoI	GCGC	1 cut(s)	1997
Cfr10I	RCCGGY	1 cut(s)	1426
Cfr13I	GGNCC	9 cut(s)	713, 776, 886, 1331, 1350, 1469, 1508, 1925, 2062
CseI	GACGC	1 cut(s)	1894
Csp6I	GTAC	6 cut(s)	290, 703, 942, 1652, 1871, 2005
CviQI	GTAC	6 cut(s)	290, 703, 942, 1652, 1871, 2005
DdeI	CTNAG	7 cut(s)	184, 235, 999, 1075, 1166, 1263, 1673
DpnI	GATC	5 cut(s)	391, 524, 744, 993, 1054
DpnII	GATC	5 cut(s)	389, 522, 742, 991, 1052
DraI	TTTAAA	1 cut(s)	1303
DrdI	GACNNNNNNGTC	2 cut(s)	893, 2024
DseDI	GACNNNNNNGTC	2 cut(s)	893, 2024
EaeI	YGGCCR	3 cut(s)	144, 215, 1743
Eam1104I	CTCTTC	4 cut(s)	408, 693, 1014, 1629
EarI	CTCTTC	4 cut(s)	408, 693, 1014, 1629
EciI	GGCGGA	1 cut(s)	1251
Ecl136II	GAGCTC	1 cut(s)	1447
Eco130I	CCWWGG	5 cut(s)	415, 850, 1153, 1848, 1998
Eco147I	AGGCCT	2 cut(s)	135, 789
Eco24I	GRGCYC	1 cut(s)	1449
Eco31I	GGTCTC	1 cut(s)	1676
Eco32I	GATATC	1 cut(s)	1762
Eco47I	GGWCC	5 cut(s)	776, 886, 1350, 1469, 1508
Eco53kI	GAGCTC	1 cut(s)	1447
Eco57I	CTGAAG	2 cut(s)	651, 801
Eco91I	GGTNACC	3 cut(s)	44, 273, 1831
EcoICRI	GAGCTC	1 cut(s)	1447
EcoNI	CCTNNNNNAGG	2 cut(s)	783, 1386
EcoO109I	RGGNCCY	1 cut(s)	1350
EcoO65I	GGTNACC	3 cut(s)	44, 273, 1831
EcoRI	GAATTC	1 cut(s)	107
EcoRII	CCWGG	6 cut(s)	794, 867, 1333, 1366, 1401, 1534
EcoRV	GATATC	1 cut(s)	1762
EcoT14I	CCWWGG	5 cut(s)	415, 850, 1153, 1848, 1998
EcoT22I	ATGCAT	1 cut(s)	1552
EcoT38I	GRGCYC	1 cut(s)	1449
ErhI	CCWWGG	5 cut(s)	415, 850, 1153, 1848, 1998
FalI	AAGNNNNNCTT	4 cut(s)	774, 806, 1641, 1673
FaqI	GGGAC	2 cut(s)	1336, 2030
FriOI	GRGCYC	1 cut(s)	1449
FspBI	CTAG	1 cut(s)	332
GlaI	GCGC	1 cut(s)	1996
GsaI	CCCAGC	2 cut(s)	719, 1068
GsuI	CTGGAG	3 cut(s)	505, 596, 1565
HapII	CCGG	5 cut(s)	81, 816, 1427, 2070, 2135
HgaI	GACGC	1 cut(s)	1894
HhaI	GCGC	1 cut(s)	1997
Hin6I	GCGC	1 cut(s)	1995
HinP1I	GCGC	1 cut(s)	1995
HincII	GTYRAC	1 cut(s)	537
HindII	GTYRAC	1 cut(s)	537
HinfI	GANTC	8 cut(s)	324, 473, 557, 1073, 1569, 1576, 1795, 2054
HpaI	GTTAAC	1 cut(s)	537
HpaII	CCGG	5 cut(s)	81, 816, 1427, 2070, 2135
HphI	GGTGA	8 cut(s)	267, 468, 656, 695, 805, 1052, 1403, 2158
Hpy166II	GTNNAC	5 cut(s)	94, 537, 647, 865, 2005
Hpy188I	TCNGA	8 cut(s)	161, 199, 364, 1057, 1078, 1264, 1663, 1951
Hpy188III	TCNNGA	9 cut(s)	186, 740, 917, 1124, 1322, 1573, 1631, 2125, 2135
Hpy8I	GTNNAC	5 cut(s)	94, 537, 647, 865, 2005
Hpy99I	CGWCG	1 cut(s)	1347
HpyCH4III	ACNGT	1 cut(s)	541
HpyCH4IV	ACGT	3 cut(s)	622, 1108, 1682
HpyF10VI	GCNNNNNNNGC	8 cut(s)	32, 77, 855, 981, 1224, 1233, 1496, 1994
HpyF3I	CTNAG	7 cut(s)	184, 235, 999, 1075, 1166, 1263, 1673
HpySE526I	ACGT	3 cut(s)	622, 1108, 1682
HspAI	GCGC	1 cut(s)	1995
KflI	GGGWCCC	1 cut(s)	1350
Kpn2I	TCCGGA	1 cut(s)	2134
KroI	GCCGGC	1 cut(s)	1426
KroNI	GCCGGC	1 cut(s)	1428
KspAI	GTTAAC	1 cut(s)	537
Kzo9I	GATC	5 cut(s)	389, 522, 742, 991, 1052
LmnI	GCTCC	5 cut(s)	11, 161, 188, 1343, 1952
LweI	GCATC	9 cut(s)	239, 483, 579, 1236, 1327, 1468, 1713, 1767, 2037
MaeI	CTAG	1 cut(s)	332
MaeII	ACGT	3 cut(s)	622, 1108, 1682
MalI	GATC	5 cut(s)	391, 524, 744, 993, 1054
MboI	GATC	5 cut(s)	389, 522, 742, 991, 1052
MfeI	CAATTG	2 cut(s)	39, 75
MflI	RGATCY	3 cut(s)	389, 742, 1052
MhlI	GDGCHC	4 cut(s)	1143, 1165, 1449, 1949
MlsI	TGGCCA	2 cut(s)	146, 1745
MluNI	TGGCCA	2 cut(s)	146, 1745
MlyI	GAGTC	2 cut(s)	467, 1067
MmeI	TCCRAC	2 cut(s)	1447, 1540
Mox20I	TGGCCA	2 cut(s)	146, 1745
Mph1103I	ATGCAT	1 cut(s)	1552
MroI	TCCGGA	1 cut(s)	2134
MroNI	GCCGGC	1 cut(s)	1426
MroXI	GAANNNNTTC	3 cut(s)	107, 1653, 1956
MscI	TGGCCA	2 cut(s)	146, 1745
MseI	TTAA	5 cut(s)	224, 536, 881, 1302, 1542
MslI	CAYNNNNRTG	4 cut(s)	1158, 1255, 1826, 1967
Msp20I	TGGCCA	2 cut(s)	146, 1745
MspA1I	CMGCKG	3 cut(s)	719, 749, 2093
MspI	CCGG	5 cut(s)	81, 816, 1427, 2070, 2135
MspR9I	CCNGG	7 cut(s)	82, 796, 869, 1335, 1368, 1403, 1536
MunI	CAATTG	2 cut(s)	39, 75
Mva1269I	GAATGC	1 cut(s)	1706
MvaI	CCWGG	6 cut(s)	796, 869, 1335, 1368, 1403, 1536
MwoI	GCNNNNNNNGC	8 cut(s)	32, 77, 855, 981, 1224, 1233, 1496, 1994
NaeI	GCCGGC	1 cut(s)	1428
NciI	CCSGG	1 cut(s)	82
NcoI	CCATGG	1 cut(s)	1153
NdeII	GATC	5 cut(s)	389, 522, 742, 991, 1052
NgoMIV	GCCGGC	1 cut(s)	1426
NmuCI	GTSAC	7 cut(s)	150, 273, 462, 811, 895, 1359, 2026
NsiI	ATGCAT	1 cut(s)	1552
NspI	RCATGY	4 cut(s)	955, 979, 1550, 2152
NspV	TTCGAA	1 cut(s)	1439
OliI	CACNNNNGTG	1 cut(s)	1967
PaeI	GCATGC	3 cut(s)	955, 1550, 2152
PagI	TCATGA	1 cut(s)	916
PceI	AGGCCT	2 cut(s)	135, 789
PctI	GAATGC	1 cut(s)	1706
PdiI	GCCGGC	1 cut(s)	1428
PdmI	GAANNNNTTC	3 cut(s)	107, 1653, 1956
PfeI	GAWTC	6 cut(s)	324, 557, 1569, 1576, 1795, 2054
PleI	GAGTC	2 cut(s)	467, 1067
PpsI	GAGTC	2 cut(s)	467, 1067
Ppu21I	YACGTR	1 cut(s)	623
PpuMI	RGGWCCY	1 cut(s)	1350
PshAI	GACNNNNGTC	1 cut(s)	1668
PsiI	TTATAA	1 cut(s)	1700
Psp124BI	GAGCTC	1 cut(s)	1449
Psp5II	RGGWCCY	1 cut(s)	1350
Psp6I	CCWGG	6 cut(s)	794, 867, 1333, 1366, 1401, 1534
PspEI	GGTNACC	3 cut(s)	44, 273, 1831
PspFI	CCCAGC	2 cut(s)	715, 1064
PspGI	CCWGG	6 cut(s)	794, 867, 1333, 1366, 1401, 1534
PspPI	GGNCC	9 cut(s)	713, 776, 886, 1331, 1350, 1469, 1508, 1925, 2062
PspPPI	RGGWCCY	1 cut(s)	1350
PstNI	CAGNNNCTG	1 cut(s)	935
PsuI	RGATCY	3 cut(s)	389, 742, 1052
PvuII	CAGCTG	2 cut(s)	719, 749
RsaI	GTAC	6 cut(s)	291, 704, 943, 1653, 1872, 2006
RsaNI	GTAC	6 cut(s)	290, 703, 942, 1652, 1871, 2005
RseI	CAYNNNNRTG	4 cut(s)	1158, 1255, 1826, 1967
SacI	GAGCTC	1 cut(s)	1449
SaqAI	TTAA	5 cut(s)	224, 536, 881, 1302, 1542
Sau3AI	GATC	5 cut(s)	389, 522, 742, 991, 1052
Sau96I	GGNCC	9 cut(s)	713, 776, 886, 1331, 1350, 1469, 1508, 1925, 2062
ScaI	AGTACT	2 cut(s)	1653, 1872
SchI	GAGTC	2 cut(s)	467, 1067
ScrFI	CCNGG	7 cut(s)	82, 796, 869, 1335, 1368, 1403, 1536
SduI	GDGCHC	4 cut(s)	1143, 1165, 1449, 1949
SfaNI	GCATC	9 cut(s)	239, 483, 579, 1236, 1327, 1468, 1713, 1767, 2037
SfcI	CTRYAG	1 cut(s)	1383
SfuI	TTCGAA	1 cut(s)	1439
SinI	GGWCC	5 cut(s)	776, 886, 1350, 1469, 1508
SmiMI	CAYNNNNRTG	4 cut(s)	1158, 1255, 1826, 1967
SmlI	CTYRAG	1 cut(s)	593
SmoI	CTYRAG	1 cut(s)	593
SphI	GCATGC	3 cut(s)	955, 1550, 2152
SseBI	AGGCCT	2 cut(s)	135, 789
SsiI	CCGC	7 cut(s)	214, 407, 426, 1177, 1236, 2093, 2201
SspI	AATATT	1 cut(s)	1956
SspMI	CTAG	1 cut(s)	332
SstI	GAGCTC	1 cut(s)	1449
StuI	AGGCCT	2 cut(s)	135, 789
StyD4I	CCNGG	7 cut(s)	80, 794, 867, 1333, 1366, 1401, 1534
StyI	CCWWGG	5 cut(s)	415, 850, 1153, 1848, 1998
TaaI	ACNGT	1 cut(s)	541
TaiI	ACGT	3 cut(s)	625, 1111, 1685
TaqI	TCGA	6 cut(s)	111, 565, 663, 1439, 1771, 2157
TatI	WGTACW	5 cut(s)	289, 702, 1651, 1870, 2004
TauI	GCSGC	4 cut(s)	217, 429, 1180, 2204
TfiI	GAWTC	6 cut(s)	324, 557, 1569, 1576, 1795, 2054
Tru1I	TTAA	5 cut(s)	224, 536, 881, 1302, 1542
Tru9I	TTAA	5 cut(s)	224, 536, 881, 1302, 1542
TscAI	CASTG	6 cut(s)	471, 546, 634, 1165, 1771, 1806
TseFI	GTSAC	7 cut(s)	150, 273, 462, 811, 895, 1359, 2026
Tsp45I	GTSAC	7 cut(s)	150, 273, 462, 811, 895, 1359, 2026
TspDTI	ATGAA	8 cut(s)	17, 905, 933, 1032, 1472, 1677, 1853, 2107
TspRI	CASTG	6 cut(s)	471, 546, 634, 1165, 1771, 1806
VpaK11BI	GGWCC	5 cut(s)	776, 886, 1350, 1469, 1508
XagI	CCTNNNNNAGG	2 cut(s)	783, 1386
XapI	RAATTY	3 cut(s)	107, 922, 1626
XceI	RCATGY	4 cut(s)	955, 979, 1550, 2152
XcmI	CCANNNNNNNNNTGG	4 cut(s)	620, 1589, 1753, 1996
XmnI	GAANNNNTTC	3 cut(s)	107, 1653, 1956
XspI	CTAG	1 cut(s)	332
ZrmI	AGTACT	2 cut(s)	1653, 1872
Zsp2I	ATGCAT	1 cut(s)	1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.