Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001036

Physical Location & Seq

Genomic Coordinates Reverse (-)

34476117 .. 34479991

Gene Structure 3875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG301100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGGGTAAAAACATGAAGGGAGCTGCGCTTGTGGCTTTTGCTGCTACAATTGGTAACTTTCTGCAAGGATGGGACAATGCTACAATTGCTGGGGCTATTGTTTACATCACGGACGATTTTGATTTAGGTAGCTCGGTAGAAGGTCTTGTTGTGGCCATGTCACTCATCGGGGCAACAGTTATTACAACATGCTCAGGAGCCATATCAGATTGGCTTGGTCGGAGGCCAATGCTAATAGCATCATCAGTTCTTTATTTTGTGAGTGGCTTGGTGATGTTGTGGTCACCCAATGTGTATGTACTATGTCTTGCAAGGCTATTAGATGGATTTGGAATTGGTTTAGCGGTTACTCTTGTCCCAGTCTACATATCCGAGACCGCCCCATCAGATATTAGGGGATCATTGAATACTCTTCCACAGTTCCTTGGTTCAGGAGGCATGTTTTTGTCATATTGTATGGTTTTCGGGATGTCACTGTTGGCCTCGCCAAGCTGGAGACTGATGCTTGGGATTCTTTCCATTCTCTCTCTTATATATTTTGTATTAACCGTGTTTTACTTACCTGAATCTCCTCGATGGCTTGTGAGTAAGGGCAGGATGCTCGAGGCAAAGAAGGTTCTCCAGAGCTTGCGTGGCACTGAAGATGTTTCTGGTGAGATGGCTTTGCTTGTTGAAGGTCTTGGAGTTGGAGGTGAACCATCTTTAGAAGAGTACATCATAGGCCTAGCTGATGATCTTGATGGTCAGGAAACAGCTGACAAAGACAAAATCAGGTTATATGGACCTGAAGAGGGCCTTTCCTGGGTTGCTAGACCTGTAACTGGGCAGGGTTCTATTGTCAGTCTTGTCTCTCGCCAAGGAAGCTTGGCAACCCTGAATGTGCCTCTAATGGATCCTCTTGTCACTCTCTTTGGTAGTGTCCATGAAAACTTCCCAGAGGCGGGGAGTACGCGGGGAAGCATGCTCTTTTCTAACTTTGGCAGCATGTTCAGCACAGCAGATCATCCACGGGGTAAAACTGATCAATGGGATGAAGAGAGCTTGCATAGGGAAGGTGAGGACTATGCATCTGGAGGAGACTCAGATGACAATCTGCATAGTCCTTTGATTTCACGCCAGACGACAAGTATGGAAAAGGATATGGTGCCGCCTCCTCCTTCCCATGGTAGTATTCTAAGCATGAGGCGCAACAGCAGTCTCATGCAAGGAACTGGGGAGACAGTTGGTAGCACAGGCATTGGTGGTGGGTGGCAGTTGGCATGGAAGTGGTCTGAGAGACAAGGTGAGGATGGAAAGAAGGAAGGAGGATTCCAGAGGGTATATTTGCACCAGGAAGGAGTCCCTGGCTCACGTCGTGGGTCCCTTGTGTCACTTCCTGGTGGTGATGTTCCTGCAGAAGGCGAGTTCATCCAGGCAGCCGCTCTGGTCAGTCAGCCTGCTCTGTATTCGAAGTCACTTATCGATCAGCATCCTGTTGGACCTGCAATGGTTCATCCATCAGAAACAGCTTCGAAAGGACCAATATGGGCTGCTCTACTTGAACCAGGGATTAAGCATGCATTGTTTGTTGGAATTGGAATCCAGATTCTTCAGCAGTTTTCTGGGATAAATGGAGTTCTCTATTACACTCCTCAAATTCTTGAAGAGGCTGGAGTCTCAGTTCTTCTTGAAAGCTTTGGTCTCAGTACAACATCTGCATCTTTCCTCATCAGTGCATTCACAACTTTGTTGATGCTTCCTTGTATAGGTCTAGCCATGAAGCTCATGGATATCTCTGGTAGAAGGATCCTGCTACTGACTACAGTTCCTGTGTTGATTGTGTCACTCATTCTTCTAGTCATTGCCAACTTAGTTACCCTAAGTTCAGTCGTTGAAGCCGCAATATCAACCACTTGTGTGATAATCTATTTCTGCGTCTTTGTCATGGCCTATGGGCCAATCCCAAATATCCTCTGCTCCGAGATCTTTCCGACGAGGGTGCGTGGCCTCTGCATTGCCATCTGTGCCCTGGCGTACTGGATTTCAGACATTATCGTCACCTACTCGCTTCCAGTTCTGCTTGATTCGATAGGCCTAGCTGGTATCTTTGGGATTTATGCCGTTGTTTGTGTCATCTCTTTGGTGTTTATCTACTTGAAAGTTCCGGAAACCAAAGGCATGCCCCTTGAAGTCATTACTGAATTCTTTTCTGTTGGTGCAAGACAAATTGCTGCTGCCAAAAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009605 GO:0009607 GO:0009624 GO:0009705 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

742

Amino Acids

79.31

Weight (kDa)

4.94

Isoelectric Point (pI)

37.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	11 - 225	3.2e-49	Sugar (and other) transporter
MFS_1	PF07690	16 - 198	7.6e-23	Major Facilitator Superfamily
Sugar_tr	PF00083	509 - 729	1.2e-38	Sugar (and other) transporter
MFS_1	PF07690	554 - 718	8e-09	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001036)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300 AT4G35300
fragaria_vesca	FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_2g16850 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950 FvH4_5g25950
malus_domestica	MD05G1139800.v1.1 MD06G1005100.v1.1 MD10G1142100.v1.1
prunus_persica	Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.5G006300_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1 Prupe.8G180600_v2.0.a1
pyrus_communis	pycom05g13500 pycom10g12180
rosa_chinensis	RchiOBHm_Chr6g0280981 RchiOBHm_Chr7g0216501
rosa_laevigata	RLG00000002567 RLG00000002578 RLG00000013010
rosa_multiflora	Rmu_sc0000692.1_g000001 Rmu_sc0030247.1_g000002 Rmu_sc0030424.1_g000003 Rmu_sc0034915.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243170 Rroxscaffold_7G00187430
rosa_rugosa	Rorug06G0137300 Rorug06G0137400 Rorug06G0137500 Rorug07G0160700
rosa_samantha	Rh6AG249900 Rh6CG252500 Rh7BG291500 Rh7DG301100
rosa_wichuraiana	Rw6G021600 Rw7G025360 Rw7G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2033
Acc36I	ACCTGC	1 cut(s)	1489
AccB1I	GGYRCC	1 cut(s)	1144
AccBSI	CCGCTC	1 cut(s)	1421
AccI	GTMKAC	1 cut(s)	363
AccII	CGCG	1 cut(s)	952
AccIII	TCCGGA	1 cut(s)	2143
AciI	CCGC	7 cut(s)	344, 378, 941, 952, 1148, 1419, 1878
AclWI	GGATC	5 cut(s)	406, 887, 900, 1780, 1793
AcoI	YGGCCR	1 cut(s)	153
AcsI	RAATTY	2 cut(s)	1635, 2180
AcuI	CTGAAG	3 cut(s)	660, 807, 1574
AdeI	CACNNNGTG	1 cut(s)	1355
AfaI	GTAC	5 cut(s)	300, 713, 949, 1687, 2015
AfiI	CCNNNNNNNGG	8 cut(s)	791, 802, 821, 940, 941, 1163, 1397, 1745
AgsI	TTSAA	8 cut(s)	406, 674, 1541, 1643, 1670, 1874, 2137, 2168
AjiI	CACGTC	1 cut(s)	1352
AjnI	CCWGG	7 cut(s)	800, 1329, 1342, 1375, 1410, 1543, 2007
AleI	CACNNNNGTG	1 cut(s)	1895
AloI	GAACNNNNNNTCC	2 cut(s)	1644, 1676
Alw26I	GTCTC	9 cut(s)	368, 490, 853, 1071, 1202, 1211, 1270, 1660, 1685
AlwI	GGATC	5 cut(s)	406, 887, 900, 1780, 1793
AlwNI	CAGNNNCTG	1 cut(s)	1808
Ama87I	CYCGRG	1 cut(s)	602
Aor13HI	TCCGGA	1 cut(s)	2143
AoxI	GGCC	9 cut(s)	153, 224, 480, 721, 793, 1926, 1934, 1984, 2071
ApeKI	GCWGC	7 cut(s)	23, 41, 981, 1415, 1529, 2210, 2213
ApoI	RAATTY	2 cut(s)	1635, 2180
AspLEI	GCGC	2 cut(s)	28, 1188
AspS9I	GGNCC	6 cut(s)	782, 793, 1359, 1478, 1517, 1934
AsuHPI	GGTGA	8 cut(s)	276, 283, 665, 704, 1067, 1295, 1394, 2029
AsuII	TTCGAA	2 cut(s)	1448, 1511
AvaI	CYCGRG	1 cut(s)	602
AvaII	GGWCC	4 cut(s)	782, 1359, 1478, 1517
BaeGI	GKGCMC	1 cut(s)	2008
BalI	TGGCCA	1 cut(s)	155
BamHI	GGATCC	2 cut(s)	892, 1785
BanI	GGYRCC	1 cut(s)	1144
BbvI	GCAGC	7 cut(s)	10, 28, 993, 1427, 1516, 2197, 2200
BceAI	ACGGC	1 cut(s)	2084
BcgI	CGANNNNNNTGC	4 cut(s)	583, 617, 1960, 1994
BciT130I	CCWGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
BclI	TGATCA	1 cut(s)	1021
BcoDI	GTCTC	9 cut(s)	368, 490, 853, 1071, 1202, 1211, 1270, 1660, 1685
BfaI	CTAG	5 cut(s)	725, 810, 1751, 1835, 2075
BfmI	CTRYAG	2 cut(s)	1392, 1800
BfuAI	ACCTGC	1 cut(s)	1489
BglII	AGATCT	1 cut(s)	1962
Bme1390I	CCNGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
Bme18I	GGWCC	4 cut(s)	782, 1359, 1478, 1517
BmeT110I	CYCGRG	1 cut(s)	602
BmgBI	CACGTC	1 cut(s)	1352
BmgT120I	GGNCC	6 cut(s)	782, 793, 1359, 1478, 1517, 1934
BmiI	GGNNCC	6 cut(s)	199, 894, 1146, 1360, 1361, 1787
BmrFI	CCNGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
BmrI	ACTGGG	3 cut(s)	353, 831, 1221
BmsI	GCATC	7 cut(s)	248, 492, 588, 1076, 1477, 1706, 1722
BmuI	ACTGGG	3 cut(s)	353, 831, 1221
BpmI	CTGGAG	4 cut(s)	514, 605, 1092, 1671
Bpu10I	CCTNAGC	1 cut(s)	193
Bpu14I	TTCGAA	2 cut(s)	1448, 1511
Bsa29I	ATCGAT	1 cut(s)	1461
BsaBI	GATNNNNATC	2 cut(s)	1089, 1467
BsaI	GGTCTC	2 cut(s)	368, 1685
BsaJI	CCNNGG	8 cut(s)	424, 801, 856, 1007, 1162, 1342, 1544, 2007
BsaWI	WCCGGW	1 cut(s)	2143
BsaXI	ACNNNNNCTCC	2 cut(s)	1644, 1674
Bsc4I	CCNNNNNNNGG	8 cut(s)	791, 802, 821, 940, 941, 1163, 1397, 1745
Bse1I	ACTGG	5 cut(s)	359, 826, 1216, 2021, 2051
Bse3DI	GCAATG	3 cut(s)	1491, 1839, 1992
Bse8I	GATNNNNATC	2 cut(s)	1089, 1467
BseAI	TCCGGA	1 cut(s)	2143
BseBI	CCWGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
BseCI	ATCGAT	1 cut(s)	1461
BseDI	CCNNGG	8 cut(s)	424, 801, 856, 1007, 1162, 1342, 1544, 2007
BseGI	GGATG	9 cut(s)	74, 474, 603, 1003, 1036, 1294, 1407, 1468, 1492
BseJI	GATNNNNATC	2 cut(s)	1089, 1467
BseLI	CCNNNNNNNGG	8 cut(s)	791, 802, 821, 940, 941, 1163, 1397, 1745
BseMI	GCAATG	3 cut(s)	1491, 1839, 1992
BseMII	CTCAG	5 cut(s)	207, 1095, 1263, 1671, 1696
BseNI	ACTGG	5 cut(s)	359, 826, 1216, 2021, 2051
BseRI	GAGGAG	4 cut(s)	561, 1089, 1143, 1620
BseSI	GKGCMC	1 cut(s)	2008
BseXI	GCAGC	7 cut(s)	10, 28, 993, 1427, 1516, 2197, 2200
BseYI	CCCAGC	1 cut(s)	89
Bsh1236I	CGCG	1 cut(s)	952
BshFI	GGCC	9 cut(s)	155, 226, 482, 723, 795, 1928, 1936, 1986, 2073
BshNI	GGYRCC	1 cut(s)	1144
BshVI	ATCGAT	1 cut(s)	1461
BsiHKCI	CYCGRG	1 cut(s)	602
BsiSI	CCGG	1 cut(s)	2144
BslFI	GGGAC	4 cut(s)	86, 341, 1325, 1345
BslI	CCNNNNNNNGG	8 cut(s)	791, 802, 821, 940, 941, 1163, 1397, 1745
BsmAI	GTCTC	9 cut(s)	368, 490, 853, 1071, 1202, 1211, 1270, 1660, 1685
BsmFI	GGGAC	4 cut(s)	86, 341, 1325, 1345
BsmI	GAATGC	1 cut(s)	1715
BsnI	GGCC	9 cut(s)	155, 226, 482, 723, 795, 1928, 1936, 1986, 2073
Bso31I	GGTCTC	2 cut(s)	368, 1685
BsoBI	CYCGRG	1 cut(s)	602
Bsp119I	TTCGAA	2 cut(s)	1448, 1511
Bsp1286I	GDGCHC	1 cut(s)	2008
Bsp13I	TCCGGA	1 cut(s)	2143
Bsp143I	GATC	8 cut(s)	398, 733, 892, 1000, 1021, 1462, 1785, 1962
Bsp19I	CCATGG	1 cut(s)	1162
BspACI	CCGC	7 cut(s)	344, 378, 941, 952, 1148, 1419, 1878
BspANI	GGCC	9 cut(s)	155, 226, 482, 723, 795, 1928, 1936, 1986, 2073
BspCNI	CTCAG	5 cut(s)	206, 1094, 1264, 1670, 1695
BspDI	ATCGAT	1 cut(s)	1461
BspEI	TCCGGA	1 cut(s)	2143
BspFNI	CGCG	1 cut(s)	952
BspLI	GGNNCC	6 cut(s)	199, 894, 1146, 1360, 1361, 1787
BspMAI	CTGCAG	1 cut(s)	1396
BspMI	ACCTGC	1 cut(s)	1489
BspPI	GGATC	5 cut(s)	406, 887, 900, 1780, 1793
BspT104I	TTCGAA	2 cut(s)	1448, 1511
BspT107I	GGYRCC	1 cut(s)	1144
BspTNI	GGTCTC	2 cut(s)	368, 1685
BsrBI	CCGCTC	1 cut(s)	1421
BsrDI	GCAATG	3 cut(s)	1491, 1839, 1992
BsrI	ACTGG	5 cut(s)	359, 826, 1216, 2021, 2051
BssECI	CCNNGG	8 cut(s)	424, 801, 856, 1007, 1162, 1342, 1544, 2007
BssMI	GATC	8 cut(s)	398, 733, 892, 1000, 1021, 1462, 1785, 1962
BssT1I	CCWWGG	3 cut(s)	424, 856, 1162
Bst2UI	CCWGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
Bst4CI	ACNGT	6 cut(s)	178, 420, 477, 550, 1222, 1804
Bst6I	CTCTTC	5 cut(s)	417, 702, 783, 1029, 1638
BstBI	TTCGAA	2 cut(s)	1448, 1511
BstC8I	GCNNGC	6 cut(s)	629, 962, 1043, 1437, 1557, 2159
BstDEI	CTNAG	8 cut(s)	193, 1081, 1175, 1272, 1657, 1682, 1849, 1859
BstDSI	CCRYGG	2 cut(s)	1007, 1162
BstEII	GGTNACC	1 cut(s)	282
BstENI	CCTNNNNNAGG	2 cut(s)	1395, 1743
BstF5I	GGATG	9 cut(s)	74, 474, 603, 1003, 1036, 1294, 1407, 1468, 1492
BstFNI	CGCG	1 cut(s)	952
BstHHI	GCGC	2 cut(s)	28, 1188
BstKTI	GATC	8 cut(s)	401, 736, 895, 1003, 1024, 1465, 1788, 1965
BstMAI	GTCTC	9 cut(s)	368, 490, 853, 1071, 1202, 1211, 1270, 1660, 1685
BstMBI	GATC	8 cut(s)	398, 733, 892, 1000, 1021, 1462, 1785, 1962
BstMWI	GCNNNNNNNGC	8 cut(s)	32, 41, 86, 633, 861, 990, 1185, 2003
BstNI	CCWGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
BstNSI	RCATGY	6 cut(s)	192, 442, 964, 988, 1559, 2161
BstPI	GGTNACC	1 cut(s)	282
BstSCI	CCNGG	7 cut(s)	800, 1329, 1342, 1375, 1410, 1543, 2007
BstSFI	CTRYAG	2 cut(s)	1392, 1800
BstSLI	GKGCMC	1 cut(s)	2008
BstUI	CGCG	1 cut(s)	952
BstV1I	GCAGC	7 cut(s)	10, 28, 993, 1427, 1516, 2197, 2200
BstX2I	RGATCY	3 cut(s)	892, 1785, 1962
BstYI	RGATCY	3 cut(s)	892, 1785, 1962
Bsu15I	ATCGAT	1 cut(s)	1461
BsuRI	GGCC	9 cut(s)	155, 226, 482, 723, 795, 1928, 1936, 1986, 2073
BsuTUI	ATCGAT	1 cut(s)	1461
BtgI	CCRYGG	2 cut(s)	1007, 1162
BtrI	CACGTC	1 cut(s)	1352
BtsCI	GGATG	9 cut(s)	74, 474, 603, 1003, 1036, 1294, 1407, 1468, 1492
BtsIMutI	CAGTG	3 cut(s)	473, 636, 1717
BveI	ACCTGC	1 cut(s)	1489
Cac8I	GCNNGC	6 cut(s)	629, 962, 1043, 1437, 1557, 2159
CaiI	CAGNNNCTG	1 cut(s)	1808
CfoI	GCGC	2 cut(s)	28, 1188
Cfr13I	GGNCC	6 cut(s)	782, 793, 1359, 1478, 1517, 1934
ClaI	ATCGAT	1 cut(s)	1461
CseI	GACGC	1 cut(s)	1903
Csp6I	GTAC	5 cut(s)	299, 712, 948, 1686, 2014
CviQI	GTAC	5 cut(s)	299, 712, 948, 1686, 2014
DdeI	CTNAG	8 cut(s)	193, 1081, 1175, 1272, 1657, 1682, 1849, 1859
DpnI	GATC	8 cut(s)	400, 735, 894, 1002, 1023, 1464, 1787, 1964
DpnII	GATC	8 cut(s)	398, 733, 892, 1000, 1021, 1462, 1785, 1962
DraIII	CACNNNGTG	1 cut(s)	1355
DrdI	GACNNNNNNGTC	1 cut(s)	2033
DseDI	GACNNNNNNGTC	1 cut(s)	2033
EaeI	YGGCCR	1 cut(s)	153
Eam1104I	CTCTTC	5 cut(s)	417, 702, 783, 1029, 1638
EarI	CTCTTC	5 cut(s)	417, 702, 783, 1029, 1638
Eco130I	CCWWGG	3 cut(s)	424, 856, 1162
Eco147I	AGGCCT	2 cut(s)	723, 2073
Eco31I	GGTCTC	2 cut(s)	368, 1685
Eco32I	GATATC	1 cut(s)	1771
Eco47I	GGWCC	4 cut(s)	782, 1359, 1478, 1517
Eco57I	CTGAAG	3 cut(s)	660, 807, 1574
Eco88I	CYCGRG	1 cut(s)	602
Eco91I	GGTNACC	1 cut(s)	282
EcoNI	CCTNNNNNAGG	2 cut(s)	1395, 1743
EcoO109I	RGGNCCY	2 cut(s)	793, 1359
EcoO65I	GGTNACC	1 cut(s)	282
EcoRI	GAATTC	1 cut(s)	2180
EcoRII	CCWGG	7 cut(s)	800, 1329, 1342, 1375, 1410, 1543, 2007
EcoRV	GATATC	1 cut(s)	1771
EcoT14I	CCWWGG	3 cut(s)	424, 856, 1162
EcoT22I	ATGCAT	2 cut(s)	1069, 1561
ErhI	CCWWGG	3 cut(s)	424, 856, 1162
FalI	AAGNNNNNCTT	2 cut(s)	780, 812
FaqI	GGGAC	4 cut(s)	86, 341, 1325, 1345
FauI	CCCGC	2 cut(s)	934, 945
FbaI	TGATCA	1 cut(s)	1021
FblI	GTMKAC	1 cut(s)	363
FokI	GGATG	9 cut(s)	81, 481, 610, 990, 1043, 1301, 1394, 1455, 1479
FspBI	CTAG	5 cut(s)	725, 810, 1751, 1835, 2075
GlaI	GCGC	2 cut(s)	27, 1187
GsaI	CCCAGC	1 cut(s)	93
GsuI	CTGGAG	4 cut(s)	514, 605, 1092, 1671
HaeIII	GGCC	9 cut(s)	155, 226, 482, 723, 795, 1928, 1936, 1986, 2073
HapII	CCGG	1 cut(s)	2144
HgaI	GACGC	1 cut(s)	1903
HhaI	GCGC	2 cut(s)	28, 1188
Hin6I	GCGC	2 cut(s)	26, 1186
HinP1I	GCGC	2 cut(s)	26, 1186
HindIII	AAGCTT	2 cut(s)	862, 1672
HinfI	GANTC	9 cut(s)	511, 566, 1079, 1308, 1338, 1578, 1585, 1653, 2063
HpaII	CCGG	1 cut(s)	2144
HphI	GGTGA	8 cut(s)	276, 283, 665, 704, 1067, 1295, 1394, 2029
Hpy166II	GTNNAC	3 cut(s)	103, 364, 695
Hpy8I	GTNNAC	3 cut(s)	103, 364, 695
Hpy99I	CGWCG	2 cut(s)	1356, 1975
HpyCH4III	ACNGT	6 cut(s)	178, 420, 477, 550, 1222, 1804
HpyCH4IV	ACGT	1 cut(s)	1351
HpyF10VI	GCNNNNNNNGC	8 cut(s)	32, 41, 86, 633, 861, 990, 1185, 2003
HpyF3I	CTNAG	8 cut(s)	193, 1081, 1175, 1272, 1657, 1682, 1849, 1859
HpySE526I	ACGT	1 cut(s)	1351
HspAI	GCGC	2 cut(s)	26, 1186
KflI	GGGWCCC	1 cut(s)	1359
Kpn2I	TCCGGA	1 cut(s)	2143
Ksp22I	TGATCA	1 cut(s)	1021
Kzo9I	GATC	8 cut(s)	398, 733, 892, 1000, 1021, 1462, 1785, 1962
LmnI	GCTCC	3 cut(s)	20, 197, 1961
Lsp1109I	GCAGC	7 cut(s)	10, 28, 993, 1427, 1516, 2197, 2200
LweI	GCATC	7 cut(s)	248, 492, 588, 1076, 1477, 1706, 1722
MaeI	CTAG	5 cut(s)	725, 810, 1751, 1835, 2075
MaeII	ACGT	1 cut(s)	1351
MalI	GATC	8 cut(s)	400, 735, 894, 1002, 1023, 1464, 1787, 1964
MbiI	CCGCTC	1 cut(s)	1421
MboI	GATC	8 cut(s)	398, 733, 892, 1000, 1021, 1462, 1785, 1962
MboII	GAAGA	9 cut(s)	404, 653, 719, 800, 1046, 1580, 1655, 1655, 1823
MfeI	CAATTG	2 cut(s)	48, 84
MflI	RGATCY	3 cut(s)	892, 1785, 1962
MhlI	GDGCHC	1 cut(s)	2008
MlsI	TGGCCA	1 cut(s)	155
MluCI	AATT	7 cut(s)	48, 84, 333, 1572, 1635, 2180, 2205
MluNI	TGGCCA	1 cut(s)	155
MlyI	GAGTC	3 cut(s)	1073, 1347, 1662
MmeI	TCCRAC	5 cut(s)	200, 667, 1456, 1549, 1994
Mox20I	TGGCCA	1 cut(s)	155
Mph1103I	ATGCAT	2 cut(s)	1069, 1561
MroI	TCCGGA	1 cut(s)	2143
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	2 cut(s)	545, 1551
MslI	CAYNNNNRTG	2 cut(s)	1264, 1895
Msp20I	TGGCCA	1 cut(s)	155
MspA1I	CMGCKG	1 cut(s)	755
MspI	CCGG	1 cut(s)	2144
MspR9I	CCNGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
MunI	CAATTG	2 cut(s)	48, 84
Mva1269I	GAATGC	1 cut(s)	1715
MvaI	CCWGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
MvnI	CGCG	1 cut(s)	952
MwoI	GCNNNNNNNGC	8 cut(s)	32, 41, 86, 633, 861, 990, 1185, 2003
NcoI	CCATGG	1 cut(s)	1162
NdeII	GATC	8 cut(s)	398, 733, 892, 1000, 1021, 1462, 1785, 1962
NlaIV	GGNNCC	6 cut(s)	199, 894, 1146, 1360, 1361, 1787
NmuCI	GTSAC	8 cut(s)	159, 282, 471, 901, 1368, 1452, 1821, 2035
NsiI	ATGCAT	2 cut(s)	1069, 1561
NspI	RCATGY	6 cut(s)	192, 442, 964, 988, 1559, 2161
NspV	TTCGAA	2 cut(s)	1448, 1511
OliI	CACNNNNGTG	1 cut(s)	1895
PaeI	GCATGC	3 cut(s)	964, 1559, 2161
PaeR7I	CTCGAG	1 cut(s)	602
PceI	AGGCCT	2 cut(s)	723, 2073
PctI	GAATGC	1 cut(s)	1715
PfeI	GAWTC	6 cut(s)	511, 566, 1308, 1578, 1585, 2063
PleI	GAGTC	3 cut(s)	1073, 1346, 1661
PpsI	GAGTC	3 cut(s)	1073, 1346, 1661
PpuMI	RGGWCCY	1 cut(s)	1359
Psp5II	RGGWCCY	1 cut(s)	1359
Psp6I	CCWGG	7 cut(s)	800, 1329, 1342, 1375, 1410, 1543, 2007
PspEI	GGTNACC	1 cut(s)	282
PspFI	CCCAGC	1 cut(s)	89
PspGI	CCWGG	7 cut(s)	800, 1329, 1342, 1375, 1410, 1543, 2007
PspN4I	GGNNCC	6 cut(s)	199, 894, 1146, 1360, 1361, 1787
PspPI	GGNCC	6 cut(s)	782, 793, 1359, 1478, 1517, 1934
PspPPI	RGGWCCY	1 cut(s)	1359
PspXI	VCTCGAGB	1 cut(s)	602
PstI	CTGCAG	1 cut(s)	1396
PstNI	CAGNNNCTG	1 cut(s)	1808
PsuI	RGATCY	3 cut(s)	892, 1785, 1962
PvuII	CAGCTG	1 cut(s)	755
RsaI	GTAC	5 cut(s)	300, 713, 949, 1687, 2015
RsaNI	GTAC	5 cut(s)	299, 712, 948, 1686, 2014
RseI	CAYNNNNRTG	2 cut(s)	1264, 1895
SaqAI	TTAA	2 cut(s)	545, 1551
Sau3AI	GATC	8 cut(s)	398, 733, 892, 1000, 1021, 1462, 1785, 1962
Sau96I	GGNCC	6 cut(s)	782, 793, 1359, 1478, 1517, 1934
SchI	GAGTC	3 cut(s)	1073, 1347, 1662
ScrFI	CCNGG	7 cut(s)	802, 1331, 1344, 1377, 1412, 1545, 2009
SduI	GDGCHC	1 cut(s)	2008
SfaNI	GCATC	7 cut(s)	248, 492, 588, 1076, 1477, 1706, 1722
SfcI	CTRYAG	2 cut(s)	1392, 1800
Sfr274I	CTCGAG	1 cut(s)	602
SfuI	TTCGAA	2 cut(s)	1448, 1511
SinI	GGWCC	4 cut(s)	782, 1359, 1478, 1517
SlaI	CTCGAG	1 cut(s)	602
SmiMI	CAYNNNNRTG	2 cut(s)	1264, 1895
SmlI	CTYRAG	1 cut(s)	602
SmoI	CTYRAG	1 cut(s)	602
SphI	GCATGC	3 cut(s)	964, 1559, 2161
Sse9I	AATT	7 cut(s)	48, 84, 333, 1572, 1635, 2180, 2205
SseBI	AGGCCT	2 cut(s)	723, 2073
SsiI	CCGC	7 cut(s)	344, 378, 941, 952, 1148, 1419, 1878
SspMI	CTAG	5 cut(s)	725, 810, 1751, 1835, 2075
StuI	AGGCCT	2 cut(s)	723, 2073
StyD4I	CCNGG	7 cut(s)	800, 1329, 1342, 1375, 1410, 1543, 2007
StyI	CCWWGG	3 cut(s)	424, 856, 1162
TaaI	ACNGT	6 cut(s)	178, 420, 477, 550, 1222, 1804
TaiI	ACGT	1 cut(s)	1354
TaqI	TCGA	6 cut(s)	574, 603, 1448, 1461, 1511, 2066
TasI	AATT	7 cut(s)	48, 84, 333, 1572, 1635, 2180, 2205
TatI	WGTACW	3 cut(s)	298, 711, 1685
TauI	GCSGC	3 cut(s)	1150, 1421, 1880
TfiI	GAWTC	6 cut(s)	511, 566, 1308, 1578, 1585, 2063
Tru1I	TTAA	2 cut(s)	545, 1551
Tru9I	TTAA	2 cut(s)	545, 1551
TscAI	CASTG	3 cut(s)	480, 643, 1717
TseFI	GTSAC	8 cut(s)	159, 282, 471, 901, 1368, 1452, 1821, 2035
TseI	GCWGC	7 cut(s)	23, 41, 981, 1415, 1529, 2210, 2213
Tsp45I	GTSAC	8 cut(s)	159, 282, 471, 901, 1368, 1452, 1821, 2035
TspDTI	ATGAA	6 cut(s)	29, 939, 1047, 1396, 1481, 1772
TspGWI	ACGGA	1 cut(s)	125
TspRI	CASTG	3 cut(s)	480, 643, 1717
VpaK11BI	GGWCC	4 cut(s)	782, 1359, 1478, 1517
XagI	CCTNNNNNAGG	2 cut(s)	1395, 1743
XapI	RAATTY	2 cut(s)	1635, 2180
XceI	RCATGY	6 cut(s)	192, 442, 964, 988, 1559, 2161
XcmI	CCANNNNNNNNNTGG	3 cut(s)	629, 1762, 2005
XhoI	CTCGAG	1 cut(s)	602
XmiI	GTMKAC	1 cut(s)	363
XspI	CTAG	5 cut(s)	725, 810, 1751, 1835, 2075
Zsp2I	ATGCAT	2 cut(s)	1069, 1561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.