MD05G1157900.v1.1

Poly(A)-specific ribonuclease PARN-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0009492
Physical Location & Seq
Reverse (-)
28723972 .. 28726923
2952 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1157900.v1.1.491

Sequence Viewer

Length: 1857 bp
ATGGCGTCTCTGCCTCCGTTTATACGGCGCCGTTTCCTCAGCACCACCACCACCACCACCACCACCAATGTCTCGAAGAAATGGGCCGTGAAGGAAGTGACGAAGTCCAATTTTTCCGAGTCCCTGGAGGAGTTCAAGGACCACCTGTCCAGCTCCGACTTCGTGGCCGTCTCGCTGCAGAAAACGGGGTCATATCGTGCGCCGTGGCACCGCCCTCGGCCCTTCGACACCGCCGACACGTCGTATTGCAAGGCCAAGTACGCCGCTGAGCGCTTCCAGCTCCTCCAGTTCGCCGCCTGCCCATTCACTCTCAGAGCCTCCAAGCTTACTCCTTACCCATACAACTTTGTCTTGTTCCCAAGGGATGAATTGAAGATGGGGATGCCAACTTATAGCTTTTCAGTTCAACCATCACATTTGACTTCCATGGCGGAAGAAGGTTTTGATTTCAATGCCTGCATATATAATGGTATTTCATACTTGTCTAGAGCACAAGAATCTGCGGCTAAAGCTCGGATGGGGAATCCGACTACCAGCAGCTATGTAATGAGCTCTTCTTCGACCCATACTGTTGCTGATACGGTTTTTGTTGAAAGAATTAAATCGCGAGTTAAGCATTGGAAAAGTGCATGTAAAAACACAAAGAAAGATAATGCTCTGCTGAGTTCCTTGAGAAAAATTGTAATGGGAAGTGAAATTTACGGAACAAGACCCTGCATGAATCTAGATGTTTGCAGTGAACGTCAAGTGCAGCTTGCTCTGGAGATGTTGAAAGAGTTCTCTGATGAACTTGTTCCTTTAATAATCCCAGCAAAGGGCGGAGGAACTCAGGCTGTTCGTGTTGTTTTGACAAGTTCTACAGCGGACAAGGACTTGTTTGAGAGAGAGCTCCAAAACCTTGAGGAGGAACAAAACAAGAGAGTTCGTGGATTTCGAGAGGTGATCGATTTGATTTCTGCTTCACAGAAACCTGTTGTCTCCCACAATTCCCTTAACGATTTCACAGTTATTCATTCACAGTTTCTCTCGCCCCTCCCGACTAATGTAGACAAGTTTATGGGTTCCTTGCACTCGGTTTTTCCCCACATACTTGATGTCAACCATCTGATGAAGAATATTGGCCCTCTAAGAAAGATGACCAATATTCCTGCAGCTATTTCGTACTTGAATAATCATTACTTCGCACCCATTGATATGGAAATTTTGCCTCAAGAAAGTGAAGGCAACATTCATAGGCATAATGTGGTGAAGATGTGCTATTTGTTTGCAAAGCTCTGCTCCATTCTGAAAATTTCCGACAATGCTATGGTATCTAACAATGCACTGTTGGCTCCAGCCATCGAAGAGTGCACAAACATTTCCAATCCGTGTTCTGACAGCCCCCAAGAATCAACGAATGAGGATATCAGAGTCTGGACAAAGAATATGAGAAAGGTCAGCTGTGATCAATTGGTATTCTTATGGGGATTCAGAAGTGGGATGACTGCGGGGATGATCAAGAGCTTGTTGTGCAAGTCACATGCCGTCTTCTCTGAAGAATTTGATGTTCGGTTTGTGGACAAGAGCTGTGCCATTGTTGTTTTCTGGCGACGTGGTTTATCTGAAACTTTTTTGGATGCCATGAGCAGTGAAGAGATTTGTGACTCTTTAATGGAGATCGCTTCAGAGGGCATAAGAGCATCAAGTTACGAAACTTACAAGAGAGTCTGCAGGTTAGGCTTATGGGAGGCAGATTTAGCGGAGTCCCTAGACAAAGCCTTGGAAGACTCGGACTACCTTATGGAAGCTAATTCAGCAACAAATTCTAAAGAAATTTGTTGGTCTAGCGACTCAGCAATAAATTTTGATGACTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0043167 GO:0043169
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
CAF1

Protein Analysis

619

Amino Acids

69.59

Weight (kDa)

6.42

Isoelectric Point (pI)

52.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CAF1 PF04857 33 - 391 1.6e-62 CAF1 family ribonuclease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1701
AccB1I GGYRCC 2 cut(s) 27, 207
AccI GTMKAC 1 cut(s) 1047
AccII CGCG 1 cut(s) 607
AcoI YGGCCR 1 cut(s) 165
AcsI RAATTY 7 cut(s) 696, 1200, 1290, 1538, 1801, 1812, 1840
AcuI CTGAAG 2 cut(s) 1554, 1647
AcyI GRCGYC 2 cut(s) 5, 28
AfaI GTAC 2 cut(s) 260, 1163
AfeI AGCGCT 1 cut(s) 272
AfiI CCNNNNNNNGG 3 cut(s) 814, 815, 904
AflIII ACRYGT 1 cut(s) 237
AgsI TTSAA 7 cut(s) 136, 373, 407, 451, 593, 772, 1168
AhdI GACNNNNNGTC 1 cut(s) 145
AjiI CACGTC 2 cut(s) 240, 1592
AjnI CCWGG 1 cut(s) 123
Alw21I GWGCWC 4 cut(s) 493, 554, 891, 1352
Alw26I GTCTC 4 cut(s) 12, 76, 175, 982
Alw44I GTGCAC 1 cut(s) 1348
AlwNI CAGNNNCTG 1 cut(s) 1413
Aor51HI AGCGCT 1 cut(s) 272
AoxI GGCC 5 cut(s) 84, 165, 218, 252, 1120
ApaLI GTGCAC 1 cut(s) 1348
ApeKI GCWGC 4 cut(s) 175, 537, 751, 1151
ApoI RAATTY 7 cut(s) 696, 1200, 1290, 1538, 1801, 1812, 1840
Asp700I GAANNNNTTC 2 cut(s) 776, 792
AspLEI GCGC 3 cut(s) 30, 202, 273
AspS9I GGNCC 4 cut(s) 84, 139, 219, 1121
AsuHPI GGTGA 2 cut(s) 952, 1258
AvaII GGWCC 1 cut(s) 139
BaeGI GKGCMC 1 cut(s) 1352
BanI GGYRCC 2 cut(s) 27, 207
BanII GRGCYC 2 cut(s) 554, 891
BbsI GAAGAC 2 cut(s) 1519, 1770
Bbv12I GWGCWC 4 cut(s) 493, 554, 891, 1352
BbvCI CCTCAGC 1 cut(s) 38
BbvI GCAGC 4 cut(s) 162, 549, 763, 1163
BccI CCATC 5 cut(s) 370, 418, 511, 1110, 1346
BceAI ACGGC 6 cut(s) 15, 41, 71, 152, 187, 1508
BcgI CGANNNNNNTGC 4 cut(s) 197, 231, 1140, 1174
BciT130I CCWGG 1 cut(s) 125
BclI TGATCA 2 cut(s) 1444, 1494
BcoDI GTCTC 4 cut(s) 12, 76, 175, 982
BfaI CTAG 4 cut(s) 486, 725, 1748, 1824
BfmI CTRYAG 4 cut(s) 176, 858, 1149, 1708
BfoI RGCGCY 2 cut(s) 31, 274
BfuAI ACCTGC 1 cut(s) 1701
BisI GCNGC 7 cut(s) 176, 264, 294, 504, 538, 752, 1152
BlpI GCTNAGC 1 cut(s) 267
BlsI GCNGC 7 cut(s) 177, 265, 295, 505, 539, 753, 1153
Bme1390I CCNGG 1 cut(s) 125
Bme18I GGWCC 1 cut(s) 139
BmeRI GACNNNNNGTC 1 cut(s) 145
BmgBI CACGTC 2 cut(s) 240, 1592
BmgT120I GGNCC 4 cut(s) 84, 139, 219, 1121
BmiI GGNNCC 4 cut(s) 29, 209, 1063, 1332
BmrFI CCNGG 1 cut(s) 125
BmsI GCATC 3 cut(s) 372, 1606, 1688
BpiI GAAGAC 2 cut(s) 1519, 1770
BpmI CTGGAG 4 cut(s) 146, 269, 782, 1317
Bpu10I CCTNAGC 1 cut(s) 38
Bpu1102I GCTNAGC 1 cut(s) 267
BpuEI CTTGAG 3 cut(s) 691, 920, 1194
Bsa29I ATCGAT 1 cut(s) 945
BsaHI GRCGYC 2 cut(s) 5, 28
BsaJI CCNNGG 6 cut(s) 123, 203, 215, 359, 426, 1758
Bsc4I CCNNNNNNNGG 3 cut(s) 814, 815, 904
Bse1I ACTGG 1 cut(s) 286
BseBI CCWGG 1 cut(s) 125
BseCI ATCGAT 1 cut(s) 945
BseDI CCNNGG 6 cut(s) 123, 203, 215, 359, 426, 1758
BseGI GGATG 6 cut(s) 370, 387, 522, 1485, 1497, 1621
BseLI CCNNNNNNNGG 3 cut(s) 814, 815, 904
BseMII CTCAG 6 cut(s) 52, 258, 325, 653, 842, 1845
BseNI ACTGG 1 cut(s) 286
BseRI GAGGAG 3 cut(s) 143, 272, 917
BseSI GKGCMC 1 cut(s) 1352
BseXI GCAGC 4 cut(s) 162, 549, 763, 1163
BseYI CCCAGC 1 cut(s) 808
BsgI GTGCAG 1 cut(s) 770
Bsh1236I CGCG 1 cut(s) 607
BshFI GGCC 5 cut(s) 86, 167, 220, 254, 1122
BshNI GGYRCC 2 cut(s) 27, 207
BshVI ATCGAT 1 cut(s) 945
BsiHKAI GWGCWC 4 cut(s) 493, 554, 891, 1352
BslFI GGGAC 2 cut(s) 106, 1729
BslI CCNNNNNNNGG 3 cut(s) 814, 815, 904
BsmAI GTCTC 4 cut(s) 12, 76, 175, 982
BsmBI CGTCTC 2 cut(s) 12, 175
BsmFI GGGAC 2 cut(s) 106, 1729
BsnI GGCC 5 cut(s) 86, 167, 220, 254, 1122
Bsp1286I GDGCHC 4 cut(s) 493, 554, 891, 1352
Bsp143I GATC 4 cut(s) 942, 1444, 1494, 1656
Bsp1720I GCTNAGC 1 cut(s) 267
Bsp19I CCATGG 1 cut(s) 426
Bsp68I TCGCGA 1 cut(s) 607
BspANI GGCC 5 cut(s) 86, 167, 220, 254, 1122
BspCNI CTCAG 6 cut(s) 51, 259, 324, 654, 841, 1844
BspDI ATCGAT 1 cut(s) 945
BspFNI CGCG 1 cut(s) 607
BspLI GGNNCC 4 cut(s) 29, 209, 1063, 1332
BspMAI CTGCAG 3 cut(s) 180, 1153, 1712
BspMI ACCTGC 1 cut(s) 1701
BspQI GCTCTTC 1 cut(s) 559
BspT107I GGYRCC 2 cut(s) 27, 207
BsrI ACTGG 1 cut(s) 286
BssECI CCNNGG 6 cut(s) 123, 203, 215, 359, 426, 1758
BssMI GATC 4 cut(s) 942, 1444, 1494, 1656
BssNI GRCGYC 2 cut(s) 5, 28
BssT1I CCWWGG 3 cut(s) 359, 426, 1758
Bst2UI CCWGG 1 cut(s) 125
Bst4CI ACNGT 5 cut(s) 571, 583, 1006, 1020, 1326
Bst6I CTCTTC 3 cut(s) 559, 1338, 1626
BstACI GRCGYC 2 cut(s) 5, 28
BstC8I GCNNGC 3 cut(s) 298, 457, 756
BstDEI CTNAG 7 cut(s) 38, 267, 311, 662, 828, 1127, 1831
BstDSI CCRYGG 2 cut(s) 203, 426
BstENI CCTNNNNNAGG 1 cut(s) 902
BstF5I GGATG 6 cut(s) 370, 387, 522, 1485, 1497, 1621
BstFNI CGCG 1 cut(s) 607
BstH2I RGCGCY 2 cut(s) 31, 274
BstHHI GCGC 3 cut(s) 30, 202, 273
BstKTI GATC 4 cut(s) 945, 1447, 1497, 1659
BstMAI GTCTC 4 cut(s) 12, 76, 175, 982
BstMBI GATC 4 cut(s) 942, 1444, 1494, 1656
BstMWI GCNNNNNNNGC 9 cut(s) 260, 277, 509, 613, 1328, 1509, 1716, 1736, 1793
BstNI CCWGG 1 cut(s) 125
BstNSI RCATGY 2 cut(s) 633, 1523
BstSCI CCNGG 1 cut(s) 123
BstSFI CTRYAG 4 cut(s) 176, 858, 1149, 1708
BstSLI GKGCMC 1 cut(s) 1352
BstUI CGCG 1 cut(s) 607
BstV1I GCAGC 4 cut(s) 162, 549, 763, 1163
BstV2I GAAGAC 2 cut(s) 1519, 1770
BstXI CCANNNNNNTGG 1 cut(s) 1195
Bsu15I ATCGAT 1 cut(s) 945
BsuRI GGCC 5 cut(s) 86, 167, 220, 254, 1122
BsuTUI ATCGAT 1 cut(s) 945
BtgI CCRYGG 2 cut(s) 203, 426
BtrI CACGTC 2 cut(s) 240, 1592
BtsCI GGATG 6 cut(s) 370, 387, 522, 1485, 1497, 1621
BtsI GCAGTG 2 cut(s) 742, 1633
BtsIMutI CAGTG 3 cut(s) 742, 1322, 1633
BtuMI TCGCGA 1 cut(s) 607
BveI ACCTGC 1 cut(s) 1701
Cac8I GCNNGC 3 cut(s) 298, 457, 756
CaiI CAGNNNCTG 1 cut(s) 1413
CfoI GCGC 3 cut(s) 30, 202, 273
Cfr13I GGNCC 4 cut(s) 84, 139, 219, 1121
ClaI ATCGAT 1 cut(s) 945
Csp6I GTAC 2 cut(s) 259, 1162
CviAII CATG 5 cut(s) 427, 630, 718, 1520, 1621
CviQI GTAC 2 cut(s) 259, 1162
DdeI CTNAG 7 cut(s) 38, 267, 311, 662, 828, 1127, 1831
DinI GGCGCC 1 cut(s) 29
DpnI GATC 4 cut(s) 944, 1446, 1496, 1658
DpnII GATC 4 cut(s) 942, 1444, 1494, 1656
DriI GACNNNNNGTC 1 cut(s) 145
EaeI YGGCCR 1 cut(s) 165
Eam1104I CTCTTC 3 cut(s) 559, 1338, 1626
Eam1105I GACNNNNNGTC 1 cut(s) 145
EarI CTCTTC 3 cut(s) 559, 1338, 1626
EciI GGCGGA 2 cut(s) 446, 834
Ecl136II GAGCTC 2 cut(s) 552, 889
Eco130I CCWWGG 3 cut(s) 359, 426, 1758
Eco24I GRGCYC 2 cut(s) 554, 891
Eco32I GATATC 1 cut(s) 1405
Eco47I GGWCC 1 cut(s) 139
Eco47III AGCGCT 1 cut(s) 272
Eco53kI GAGCTC 2 cut(s) 552, 889
Eco57I CTGAAG 2 cut(s) 1554, 1647
EcoICRI GAGCTC 2 cut(s) 552, 889
EcoNI CCTNNNNNAGG 1 cut(s) 902
EcoRII CCWGG 1 cut(s) 123
EcoRV GATATC 1 cut(s) 1405
EcoT14I CCWWGG 3 cut(s) 359, 426, 1758
EcoT38I GRGCYC 2 cut(s) 554, 891
EgeI GGCGCC 1 cut(s) 29
EheI GGCGCC 1 cut(s) 29
ErhI CCWWGG 3 cut(s) 359, 426, 1758
Esp3I CGTCTC 2 cut(s) 12, 175
FaeI CATG 5 cut(s) 430, 633, 721, 1523, 1624
FalI AAGNNNNNCTT 2 cut(s) 738, 770
FaqI GGGAC 2 cut(s) 106, 1729
FatI CATG 5 cut(s) 426, 629, 717, 1519, 1620
FauI CCCGC 1 cut(s) 1480
FbaI TGATCA 2 cut(s) 1444, 1494
FblI GTMKAC 1 cut(s) 1047
Fnu4HI GCNGC 7 cut(s) 176, 264, 294, 504, 538, 752, 1152
FokI GGATG 6 cut(s) 377, 394, 529, 1492, 1504, 1628
FriOI GRGCYC 2 cut(s) 554, 891
Fsp4HI GCNGC 7 cut(s) 176, 264, 294, 504, 538, 752, 1152
FspBI CTAG 4 cut(s) 486, 725, 1748, 1824
GlaI GCGC 3 cut(s) 29, 201, 272
GluI GCNGC 7 cut(s) 176, 264, 294, 504, 538, 752, 1152
GsaI CCCAGC 1 cut(s) 812
GsuI CTGGAG 4 cut(s) 146, 269, 782, 1317
HaeII RGCGCY 2 cut(s) 31, 274
HaeIII GGCC 5 cut(s) 86, 167, 220, 254, 1122
HhaI GCGC 3 cut(s) 30, 202, 273
Hin1I GRCGYC 2 cut(s) 5, 28
Hin1II CATG 5 cut(s) 430, 633, 721, 1523, 1624
Hin6I GCGC 3 cut(s) 28, 200, 271
HinP1I GCGC 3 cut(s) 28, 200, 271
HincII GTYRAC 1 cut(s) 1099
HindII GTYRAC 1 cut(s) 1099
HindIII AAGCTT 1 cut(s) 323
HphI GGTGA 2 cut(s) 952, 1258
Hpy166II GTNNAC 5 cut(s) 740, 1048, 1099, 1350, 1558
Hpy8I GTNNAC 5 cut(s) 740, 1048, 1099, 1350, 1558
Hpy99I CGWCG 2 cut(s) 244, 1593
HpyAV CCTTC 4 cut(s) 85, 232, 431, 1214
HpyCH4III ACNGT 5 cut(s) 571, 583, 1006, 1020, 1326
HpyCH4IV ACGT 3 cut(s) 239, 742, 1591
HpyF10VI GCNNNNNNNGC 9 cut(s) 260, 277, 509, 613, 1328, 1509, 1716, 1736, 1793
HpyF3I CTNAG 7 cut(s) 38, 267, 311, 662, 828, 1127, 1831
HpySE526I ACGT 3 cut(s) 239, 742, 1591
Hsp92I GRCGYC 2 cut(s) 5, 28
Hsp92II CATG 5 cut(s) 430, 633, 721, 1523, 1624
HspAI GCGC 3 cut(s) 28, 200, 271
KasI GGCGCC 1 cut(s) 27
Ksp22I TGATCA 2 cut(s) 1444, 1494
Kzo9I GATC 4 cut(s) 942, 1444, 1494, 1656
LguI GCTCTTC 1 cut(s) 559
LmnI GCTCC 5 cut(s) 158, 285, 894, 1283, 1336
Lsp1109I GCAGC 4 cut(s) 162, 549, 763, 1163
LweI GCATC 3 cut(s) 372, 1606, 1688
MaeI CTAG 4 cut(s) 486, 725, 1748, 1824
MaeII ACGT 3 cut(s) 239, 742, 1591
MaeIII GTNAC 4 cut(s) 97, 1515, 1640, 1685
MalI GATC 4 cut(s) 944, 1446, 1496, 1658
MboI GATC 4 cut(s) 942, 1444, 1494, 1656
MfeI CAATTG 1 cut(s) 1448
MhlI GDGCHC 4 cut(s) 493, 554, 891, 1352
Mly113I GGCGCC 1 cut(s) 28
MlyI GAGTC 7 cut(s) 128, 1419, 1637, 1713, 1751, 1760, 1823
MmeI TCCRAC 3 cut(s) 180, 551, 1320
MroXI GAANNNNTTC 2 cut(s) 776, 792
MseI TTAA 5 cut(s) 600, 612, 800, 993, 1649
MslI CAYNNNNRTG 1 cut(s) 1193
MspA1I CMGCKG 3 cut(s) 266, 863, 1440
MspR9I CCNGG 1 cut(s) 125
MunI CAATTG 1 cut(s) 1448
MvaI CCWGG 1 cut(s) 125
MvnI CGCG 1 cut(s) 607
MwoI GCNNNNNNNGC 9 cut(s) 260, 277, 509, 613, 1328, 1509, 1716, 1736, 1793
NarI GGCGCC 1 cut(s) 28
NcoI CCATGG 1 cut(s) 426
NdeII GATC 4 cut(s) 942, 1444, 1494, 1656
NlaIII CATG 5 cut(s) 430, 633, 721, 1523, 1624
NlaIV GGNNCC 4 cut(s) 29, 209, 1063, 1332
NmeAIII GCCGAG 1 cut(s) 196
NmuCI GTSAC 3 cut(s) 97, 1515, 1640
NruI TCGCGA 1 cut(s) 607
NspI RCATGY 2 cut(s) 633, 1523
PciSI GCTCTTC 1 cut(s) 559
PcsI WCGNNNNNNNCGW 3 cut(s) 231, 931, 1034
PdmI GAANNNNTTC 2 cut(s) 776, 792
PfeI GAWTC 5 cut(s) 497, 523, 721, 1388, 1467
PflFI GACNNNGTC 1 cut(s) 103
PkrI GCNGC 7 cut(s) 177, 265, 295, 505, 539, 753, 1153
PleI GAGTC 7 cut(s) 127, 1418, 1637, 1712, 1750, 1760, 1823
PluTI GGCGCC 1 cut(s) 31
PpsI GAGTC 7 cut(s) 127, 1418, 1637, 1712, 1750, 1760, 1823
Psp124BI GAGCTC 2 cut(s) 554, 891
Psp6I CCWGG 1 cut(s) 123
PspFI CCCAGC 1 cut(s) 808
PspGI CCWGG 1 cut(s) 123
PspN4I GGNNCC 4 cut(s) 29, 209, 1063, 1332
PspPI GGNCC 4 cut(s) 84, 139, 219, 1121
PstI CTGCAG 3 cut(s) 180, 1153, 1712
PstNI CAGNNNCTG 1 cut(s) 1413
PsyI GACNNNGTC 1 cut(s) 103
PvuII CAGCTG 1 cut(s) 1440
RruI TCGCGA 1 cut(s) 607
RsaI GTAC 2 cut(s) 260, 1163
RsaNI GTAC 2 cut(s) 259, 1162
RseI CAYNNNNRTG 1 cut(s) 1193
SacI GAGCTC 2 cut(s) 554, 891
SapI GCTCTTC 1 cut(s) 559
SaqAI TTAA 5 cut(s) 600, 612, 800, 993, 1649
SatI GCNGC 7 cut(s) 176, 264, 294, 504, 538, 752, 1152
Sau3AI GATC 4 cut(s) 942, 1444, 1494, 1656
Sau96I GGNCC 4 cut(s) 84, 139, 219, 1121
SchI GAGTC 7 cut(s) 128, 1419, 1637, 1713, 1751, 1760, 1823
ScrFI CCNGG 1 cut(s) 125
SduI GDGCHC 4 cut(s) 493, 554, 891, 1352
SfaNI GCATC 3 cut(s) 372, 1606, 1688
SfcI CTRYAG 4 cut(s) 176, 858, 1149, 1708
SfoI GGCGCC 1 cut(s) 29
SinI GGWCC 1 cut(s) 139
SmiMI CAYNNNNRTG 1 cut(s) 1193
SmlI CTYRAG 3 cut(s) 670, 899, 1209
SmoI CTYRAG 3 cut(s) 670, 899, 1209
SspDI GGCGCC 1 cut(s) 27
SspI AATATT 2 cut(s) 1117, 1144
SspMI CTAG 4 cut(s) 486, 725, 1748, 1824
SstI GAGCTC 2 cut(s) 554, 891
StyD4I CCNGG 1 cut(s) 123
StyI CCWWGG 3 cut(s) 359, 426, 1758
TaaI ACNGT 5 cut(s) 571, 583, 1006, 1020, 1326
TaiI ACGT 3 cut(s) 242, 745, 1594
TaqI TCGA 6 cut(s) 74, 225, 560, 934, 945, 1341
TauI GCSGC 3 cut(s) 266, 296, 506
TfiI GAWTC 5 cut(s) 497, 523, 721, 1388, 1467
Tru1I TTAA 5 cut(s) 600, 612, 800, 993, 1649
Tru9I TTAA 5 cut(s) 600, 612, 800, 993, 1649
TscAI CASTG 3 cut(s) 742, 1329, 1633
TseFI GTSAC 3 cut(s) 97, 1515, 1640
TseI GCWGC 4 cut(s) 175, 537, 751, 1151
Tsp45I GTSAC 3 cut(s) 97, 1515, 1640
TspDTI ATGAA 7 cut(s) 381, 465, 734, 801, 1001, 1124, 1220
TspGWI ACGGA 3 cut(s) 6, 717, 1356
TspRI CASTG 3 cut(s) 742, 1329, 1633
Tth111I GACNNNGTC 1 cut(s) 103
VneI GTGCAC 1 cut(s) 1348
VpaK11BI GGWCC 1 cut(s) 139
XagI CCTNNNNNAGG 1 cut(s) 902
XapI RAATTY 7 cut(s) 696, 1200, 1290, 1538, 1801, 1812, 1840
XbaI TCTAGA 2 cut(s) 485, 724
XceI RCATGY 2 cut(s) 633, 1523
XmiI GTMKAC 1 cut(s) 1047
XmnI GAANNNNTTC 2 cut(s) 776, 792
XspI CTAG 4 cut(s) 486, 725, 1748, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.