Rroxscaffold_7G00186140

Poly(A)-specific ribonuclease PARN-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0009492
Physical Location & Seq
Forward (+)
25551787 .. 25554923
3137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00186140.1

Sequence Viewer

Length: 1839 bp
ATGGCGACTCTGATACGGCGGCGTTTGCTCTGCACGAGCGCCAAGGCGGGGAAGAAATGGGCGGTGAAGGAGGTGACGAAGGCGAATTTTTCGGAGGCGGTGGAGGAGTTCAAGGACGACCTGGCTGGGTCGGACTTTGTTGCCGTGTCGCTGCAGAAAACGGGGTCGTTTTCGGCGGGATGGCACCTCGCGCTGCCGTTCGACACGAACGACACGGCGTATTTGAAGGCGAAGTACGCGGCGGAGCGTTTCCAGGTGCTTCAGTTCGCCGCCTGCCCTTTCAGTCTTAAAGCCTCCAAGCTCACCGCTCACCCATATAACTTTATATTGTTCCCTAGAGATGAACTGAAGGTGGGGATGCCGTCTTATAGTTTTTCGGTTCAAACATCACATTTGACGTACATGGCTCAAGAGGGTTTTGATTTTAATGCCTGCATATATGATGGTATATCGTACTTATCTAAAGCACAAGAATCTGCAGCTAAAGTGCGGATAGGGAATCTGACGCCCGGAAACTATGTCGTAGATTCTTCTGTAACGCATACTGTTGCTGATACGATTTTTATTGAGAGAATTAAATCACGAGTTAAGCATTGGAAAAATGCGTGCAAGAAGTCGAGCTCAAGGACAGATGATGCTCTGCTGAGTTCCTTGAGAAAACTTGTGATGGGGACTGAAATTTATGGATCGAGACCATGCATGAATATAGATGTTTGCAGCGAGCGTCAAGTACAGCTTGCACTGGAGATGCTAAAAGAGTTCAGTGATGAACTTGTTCCTTTAATAATCCCAGCAAATGGTGGAGGTACTCAGTCTGTTCGAGTTGTTTTGACAAGTTCTAAAGAGGACAAGGACTTGTTTGAGAGAGAGCTTCAAAACGTTGTGGAGGAACAAAACAAGAGGGTTCGTGGATTTCGAGAGGTGATCGATTTGATTTCTGCTTCACAGAAACCTGTTGTCTCCCACAATTCCCTTAATGATTTCACATTTATTCATTCCAAATTTCTCTCTCCCCTGCCGGCTAACGTAGATGAGTTTACAGGCTCTTTGAGCTTGGTTTTTCCCCACATACTTGATATCAACCATCTGATGAAGAATATTGGCCCTTTAAGGAAGGTGACCAATATACCTGCAGCTATTTCCTACCTGAATAATCATTACTTTGCACCTATTGATTTGGAAACTTTACCTCAAGAAAATGAAGGCAAAATTCATAGGCATAATGTCGTGAAGATGTGTTATTTGTTTGCGAAGCTCTGCACCATTCTGAAAATTCCGGAGAATGCTAAGCTATCTAACAATCACCCATTAGCTCCAGCCCTTGACGAGTACACTAACATATCCAATCCCTTCTCCGACATTCCCCAGGAATCAATCAATGAGGATATCAGAATCTGGAGAAATAATATGAGAAAAATCAGCTGTGATAATTTGGTATTCTTATGGGGATTTAGAAGTGGGTTGACCGCTGGAATGCTGAAGAGCATGTTGCACAAGTCACATGATGTTTTCTCTGAAGACTTTGATGTTCGGTTAGTAGATAAGAGCTGTGCCATTGTTGTTTTCTGGCAACCTGGTTTATCTGGAACTTTCCTTGATGTTGCGAGTAACGAAGCCATCTGTGGATCCTTGAGGGAGATGGTCTCAGAGGGCCTAAGAGCAACTAGTTATAGAACTTACAAGAGAGTCTGTAAGTTGGGCTTATGGGAGGCAGATTTAGCAGAGTCCTTGGACAAAGCTTTAGAAGATCCAGACTATAGTATGGAAGCTGATTCAACAACAAATGGCAGAGAAATTCTTTGGTCTACTGACTCTATGATTAATTTTGATGACCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0043167 GO:0043169
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
CAF1

Protein Analysis

612

Amino Acids

68.72

Weight (kDa)

6.24

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CAF1 PF04857 25 - 388 2.3e-61 CAF1 family ribonuclease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1138
AccB1I GGYRCC 1 cut(s) 183
AccB7I CCANNNNNTGG 1 cut(s) 797
AccBSI CCGCTC 1 cut(s) 308
AccI GTMKAC 1 cut(s) 1805
AccII CGCG 2 cut(s) 191, 239
AccIII TCCGGA 1 cut(s) 1276
AclI AACGTT 1 cut(s) 879
AclWI GGATC 4 cut(s) 694, 1620, 1633, 1742
AcsI RAATTY 6 cut(s) 85, 678, 1001, 1209, 1272, 1794
AcuI CTGAAG 4 cut(s) 245, 368, 1499, 1536
AcyI GRCGYC 1 cut(s) 506
AfaI GTAC 6 cut(s) 236, 401, 455, 732, 808, 1331
AfiI CCNNNNNNNGG 2 cut(s) 48, 797
AgsI TTSAA 5 cut(s) 112, 226, 383, 875, 1776
AhlI ACTAGT 1 cut(s) 1664
AjnI CCWGG 4 cut(s) 120, 252, 1365, 1573
Alw21I GWGCWC 1 cut(s) 623
Alw26I GTCTC 3 cut(s) 685, 964, 1648
AlwI GGATC 4 cut(s) 694, 1620, 1633, 1742
AlwNI CAGNNNCTG 1 cut(s) 1395
Aor13HI TCCGGA 1 cut(s) 1276
AoxI GGCC 2 cut(s) 1102, 1651
ApeKI GCWGC 5 cut(s) 151, 193, 479, 717, 1133
ApoI RAATTY 6 cut(s) 85, 678, 1001, 1209, 1272, 1794
AseI ATTAAT 1 cut(s) 1821
Asp700I GAANNNNTTC 1 cut(s) 774
AspLEI GCGC 2 cut(s) 41, 193
AspS9I GGNCC 2 cut(s) 1103, 1651
AsuC2I CCSGG 1 cut(s) 510
AsuHPI GGTGA 7 cut(s) 76, 85, 295, 302, 934, 1129, 1295
BamHI GGATCC 1 cut(s) 1625
BanI GGYRCC 1 cut(s) 183
BanII GRGCYC 1 cut(s) 623
BarI GAAGNNNNNNTAC 2 cut(s) 218, 250
BauI CACGAG 2 cut(s) 34, 582
BbsI GAAGAC 1 cut(s) 1524
Bbv12I GWGCWC 1 cut(s) 623
BbvI GCAGC 5 cut(s) 138, 180, 491, 729, 1145
BccI CCATC 6 cut(s) 174, 437, 661, 1092, 1625, 1633
BceAI ACGGC 5 cut(s) 32, 128, 181, 231, 346
BciT130I CCWGG 4 cut(s) 122, 254, 1367, 1575
BcnI CCSGG 1 cut(s) 510
BcoDI GTCTC 3 cut(s) 685, 964, 1648
BcuI ACTAGT 1 cut(s) 1664
BfaI CTAG 2 cut(s) 336, 1665
BfmI CTRYAG 4 cut(s) 152, 477, 1131, 1756
BfoI RGCGCY 1 cut(s) 42
BfuAI ACCTGC 1 cut(s) 1138
BisI GCNGC 8 cut(s) 20, 152, 194, 240, 270, 480, 718, 1134
BlpI GCTNAGC 1 cut(s) 1287
BlsI GCNGC 8 cut(s) 21, 153, 195, 241, 271, 481, 719, 1135
Bme1390I CCNGG 5 cut(s) 122, 254, 510, 1367, 1575
BmgT120I GGNCC 2 cut(s) 1103, 1651
BmiI GGNNCC 2 cut(s) 185, 1627
BmrFI CCNGG 5 cut(s) 122, 254, 510, 1367, 1575
BmsI GCATC 3 cut(s) 348, 625, 738
BpiI GAAGAC 1 cut(s) 1524
BplI GAGNNNNNCTC 2 cut(s) 1628, 1660
BpmI CTGGAG 3 cut(s) 764, 1299, 1417
Bpu1102I GCTNAGC 1 cut(s) 1287
BpuEI CTTGAG 5 cut(s) 393, 607, 673, 1176, 1651
BpuMI CCSGG 1 cut(s) 510
Bsa29I ATCGAT 1 cut(s) 927
BsaHI GRCGYC 1 cut(s) 506
BsaI GGTCTC 2 cut(s) 685, 1648
BsaJI CCNNGG 3 cut(s) 42, 1365, 1728
BsaWI WCCGGW 1 cut(s) 1276
Bsc4I CCNNNNNNNGG 2 cut(s) 48, 797
Bse118I RCCGGY 1 cut(s) 1018
Bse1I ACTGG 1 cut(s) 747
BseAI TCCGGA 1 cut(s) 1276
BseBI CCWGG 4 cut(s) 122, 254, 1367, 1575
BseCI ATCGAT 1 cut(s) 927
BseDI CCNNGG 3 cut(s) 42, 1365, 1728
BseGI GGATG 2 cut(s) 185, 363
BseLI CCNNNNNNNGG 2 cut(s) 48, 797
BseMII CTCAG 3 cut(s) 635, 824, 1659
BseNI ACTGG 1 cut(s) 747
BseRI GAGGAG 1 cut(s) 119
BseXI GCAGC 5 cut(s) 138, 180, 491, 729, 1145
BseYI CCCAGC 2 cut(s) 125, 790
BsgI GTGCAG 2 cut(s) 16, 1243
Bsh1236I CGCG 2 cut(s) 191, 239
BshFI GGCC 2 cut(s) 1104, 1653
BshNI GGYRCC 1 cut(s) 183
BshVI ATCGAT 1 cut(s) 927
BsiHKAI GWGCWC 1 cut(s) 623
BsiSI CCGG 3 cut(s) 510, 1019, 1277
BslFI GGGAC 1 cut(s) 685
BslI CCNNNNNNNGG 2 cut(s) 48, 797
BsmAI GTCTC 3 cut(s) 685, 964, 1648
BsmFI GGGAC 1 cut(s) 685
BsmI GAATGC 2 cut(s) 1288, 1479
BsnI GGCC 2 cut(s) 1104, 1653
Bso31I GGTCTC 2 cut(s) 685, 1648
Bsp1286I GDGCHC 1 cut(s) 623
Bsp13I TCCGGA 1 cut(s) 1276
Bsp143I GATC 4 cut(s) 686, 924, 1625, 1747
Bsp1720I GCTNAGC 1 cut(s) 1287
BspANI GGCC 2 cut(s) 1104, 1653
BspCNI CTCAG 3 cut(s) 636, 823, 1658
BspDI ATCGAT 1 cut(s) 927
BspEI TCCGGA 1 cut(s) 1276
BspFNI CGCG 2 cut(s) 191, 239
BspLI GGNNCC 2 cut(s) 185, 1627
BspMAI CTGCAG 3 cut(s) 156, 481, 1135
BspMI ACCTGC 1 cut(s) 1138
BspPI GGATC 4 cut(s) 694, 1620, 1633, 1742
BspQI GCTCTTC 1 cut(s) 1475
BspT107I GGYRCC 1 cut(s) 183
BspTNI GGTCTC 2 cut(s) 685, 1648
BsrBI CCGCTC 1 cut(s) 308
BsrFI RCCGGY 1 cut(s) 1018
BsrI ACTGG 1 cut(s) 747
BssAI RCCGGY 1 cut(s) 1018
BssECI CCNNGG 3 cut(s) 42, 1365, 1728
BssMI GATC 4 cut(s) 686, 924, 1625, 1747
BssNI GRCGYC 1 cut(s) 506
BssSI CACGAG 2 cut(s) 34, 582
BssT1I CCWWGG 2 cut(s) 42, 1728
Bst2BI CACGAG 2 cut(s) 34, 582
Bst2UI CCWGG 4 cut(s) 122, 254, 1367, 1575
Bst4CI ACNGT 1 cut(s) 547
Bst6I CTCTTC 1 cut(s) 1475
BstACI GRCGYC 1 cut(s) 506
BstC8I GCNNGC 6 cut(s) 274, 433, 607, 722, 738, 1020
BstDEI CTNAG 5 cut(s) 644, 810, 1287, 1645, 1655
BstEII GGTNACC 1 cut(s) 1117
BstF5I GGATG 2 cut(s) 185, 363
BstFNI CGCG 2 cut(s) 191, 239
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 2 cut(s) 41, 193
BstKTI GATC 4 cut(s) 689, 927, 1628, 1750
BstMAI GTCTC 3 cut(s) 685, 964, 1648
BstMBI GATC 4 cut(s) 686, 924, 1625, 1747
BstMWI GCNNNNNNNGC 5 cut(s) 25, 190, 236, 1050, 1718
BstNI CCWGG 4 cut(s) 122, 254, 1367, 1575
BstNSI RCATGY 1 cut(s) 1489
BstPI GGTNACC 1 cut(s) 1117
BstSCI CCNGG 5 cut(s) 120, 252, 508, 1365, 1573
BstSFI CTRYAG 4 cut(s) 152, 477, 1131, 1756
BstUI CGCG 2 cut(s) 191, 239
BstV1I GCAGC 5 cut(s) 138, 180, 491, 729, 1145
BstV2I GAAGAC 1 cut(s) 1524
BstX2I RGATCY 2 cut(s) 1625, 1747
BstYI RGATCY 2 cut(s) 1625, 1747
Bsu15I ATCGAT 1 cut(s) 927
BsuRI GGCC 2 cut(s) 1104, 1653
BsuTUI ATCGAT 1 cut(s) 927
BtsCI GGATG 2 cut(s) 185, 363
BtsIMutI CAGTG 2 cut(s) 740, 769
BveI ACCTGC 1 cut(s) 1138
Cac8I GCNNGC 6 cut(s) 274, 433, 607, 722, 738, 1020
CaiI CAGNNNCTG 1 cut(s) 1395
CfoI GCGC 2 cut(s) 41, 193
Cfr10I RCCGGY 1 cut(s) 1018
Cfr13I GGNCC 2 cut(s) 1103, 1651
ClaI ATCGAT 1 cut(s) 927
CseI GACGC 2 cut(s) 514, 713
CsiI ACCWGGT 1 cut(s) 1573
Csp6I GTAC 6 cut(s) 235, 400, 454, 731, 807, 1330
CviAII CATG 5 cut(s) 403, 696, 700, 1486, 1502
CviQI GTAC 6 cut(s) 235, 400, 454, 731, 807, 1330
DdeI CTNAG 5 cut(s) 644, 810, 1287, 1645, 1655
DpnI GATC 4 cut(s) 688, 926, 1627, 1749
DpnII GATC 4 cut(s) 686, 924, 1625, 1747
Eam1104I CTCTTC 1 cut(s) 1475
EarI CTCTTC 1 cut(s) 1475
EciI GGCGGA 1 cut(s) 257
Ecl136II GAGCTC 1 cut(s) 621
Eco130I CCWWGG 2 cut(s) 42, 1728
Eco24I GRGCYC 1 cut(s) 623
Eco31I GGTCTC 2 cut(s) 685, 1648
Eco32I GATATC 2 cut(s) 1078, 1387
Eco53kI GAGCTC 1 cut(s) 621
Eco57I CTGAAG 4 cut(s) 245, 368, 1499, 1536
Eco91I GGTNACC 1 cut(s) 1117
EcoICRI GAGCTC 1 cut(s) 621
EcoO109I RGGNCCY 1 cut(s) 1651
EcoO65I GGTNACC 1 cut(s) 1117
EcoRII CCWGG 4 cut(s) 120, 252, 1365, 1573
EcoRV GATATC 2 cut(s) 1078, 1387
EcoT14I CCWWGG 2 cut(s) 42, 1728
EcoT22I ATGCAT 1 cut(s) 701
EcoT38I GRGCYC 1 cut(s) 623
ErhI CCWWGG 2 cut(s) 42, 1728
FaeI CATG 5 cut(s) 406, 699, 703, 1489, 1505
FalI AAGNNNNNCTT 4 cut(s) 720, 752, 1685, 1717
FaqI GGGAC 1 cut(s) 685
FatI CATG 5 cut(s) 402, 695, 699, 1485, 1501
FauI CCCGC 2 cut(s) 40, 169
FblI GTMKAC 1 cut(s) 1805
Fnu4HI GCNGC 8 cut(s) 20, 152, 194, 240, 270, 480, 718, 1134
FokI GGATG 2 cut(s) 192, 370
FriOI GRGCYC 1 cut(s) 623
Fsp4HI GCNGC 8 cut(s) 20, 152, 194, 240, 270, 480, 718, 1134
FspBI CTAG 2 cut(s) 336, 1665
GlaI GCGC 2 cut(s) 40, 192
GluI GCNGC 8 cut(s) 20, 152, 194, 240, 270, 480, 718, 1134
GsaI CCCAGC 2 cut(s) 129, 794
GsuI CTGGAG 3 cut(s) 764, 1299, 1417
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 2 cut(s) 1104, 1653
HapII CCGG 3 cut(s) 510, 1019, 1277
HgaI GACGC 2 cut(s) 514, 713
HhaI GCGC 2 cut(s) 41, 193
Hin1I GRCGYC 1 cut(s) 506
Hin1II CATG 5 cut(s) 406, 699, 703, 1489, 1505
Hin6I GCGC 2 cut(s) 39, 191
HinP1I GCGC 2 cut(s) 39, 191
HincII GTYRAC 1 cut(s) 1464
HindII GTYRAC 1 cut(s) 1464
HindIII AAGCTT 1 cut(s) 1737
HpaII CCGG 3 cut(s) 510, 1019, 1277
HphI GGTGA 7 cut(s) 76, 85, 295, 302, 934, 1129, 1295
Hpy166II GTNNAC 4 cut(s) 1038, 1332, 1464, 1806
Hpy8I GTNNAC 4 cut(s) 1038, 1332, 1464, 1806
HpyAV CCTTC 7 cut(s) 61, 73, 220, 343, 1108, 1196, 1360
HpyCH4III ACNGT 1 cut(s) 547
HpyCH4IV ACGT 3 cut(s) 398, 879, 1026
HpyF10VI GCNNNNNNNGC 5 cut(s) 25, 190, 236, 1050, 1718
HpyF3I CTNAG 5 cut(s) 644, 810, 1287, 1645, 1655
HpySE526I ACGT 3 cut(s) 398, 879, 1026
Hsp92I GRCGYC 1 cut(s) 506
Hsp92II CATG 5 cut(s) 406, 699, 703, 1489, 1505
HspAI GCGC 2 cut(s) 39, 191
Kpn2I TCCGGA 1 cut(s) 1276
KroI GCCGGC 1 cut(s) 1018
KroNI GCCGGC 1 cut(s) 1020
Kzo9I GATC 4 cut(s) 686, 924, 1625, 1747
LguI GCTCTTC 1 cut(s) 1475
LmnI GCTCC 2 cut(s) 244, 1318
Lsp1109I GCAGC 5 cut(s) 138, 180, 491, 729, 1145
LweI GCATC 3 cut(s) 348, 625, 738
MabI ACCWGGT 1 cut(s) 1573
MaeI CTAG 2 cut(s) 336, 1665
MaeII ACGT 3 cut(s) 398, 879, 1026
MaeIII GTNAC 5 cut(s) 73, 535, 1117, 1497, 1607
MalI GATC 4 cut(s) 688, 926, 1627, 1749
MbiI CCGCTC 1 cut(s) 308
MboI GATC 4 cut(s) 686, 924, 1625, 1747
MboII GAAGA 7 cut(s) 64, 522, 1105, 1243, 1492, 1529, 1757
MflI RGATCY 2 cut(s) 1625, 1747
MhlI GDGCHC 1 cut(s) 623
MlyI GAGTC 3 cut(s) 1695, 1733, 1805
MmeI TCCRAC 2 cut(s) 111, 1380
Mph1103I ATGCAT 1 cut(s) 701
MroI TCCGGA 1 cut(s) 1276
MroNI GCCGGC 1 cut(s) 1018
MroXI GAANNNNTTC 1 cut(s) 774
MseI TTAA 8 cut(s) 288, 426, 576, 588, 782, 975, 1109, 1821
MspA1I CMGCKG 2 cut(s) 1422, 1469
MspI CCGG 3 cut(s) 510, 1019, 1277
MspR9I CCNGG 5 cut(s) 122, 254, 510, 1367, 1575
Mva1269I GAATGC 2 cut(s) 1288, 1479
MvaI CCWGG 4 cut(s) 122, 254, 1367, 1575
MvnI CGCG 2 cut(s) 191, 239
MwoI GCNNNNNNNGC 5 cut(s) 25, 190, 236, 1050, 1718
NaeI GCCGGC 1 cut(s) 1020
NciI CCSGG 1 cut(s) 510
NdeII GATC 4 cut(s) 686, 924, 1625, 1747
NgoMIV GCCGGC 1 cut(s) 1018
NlaIII CATG 5 cut(s) 406, 699, 703, 1489, 1505
NlaIV GGNNCC 2 cut(s) 185, 1627
NmuCI GTSAC 3 cut(s) 73, 1117, 1497
NsiI ATGCAT 1 cut(s) 701
NspI RCATGY 1 cut(s) 1489
PciSI GCTCTTC 1 cut(s) 1475
PcsI WCGNNNNNNNCGW 2 cut(s) 207, 913
PctI GAATGC 2 cut(s) 1288, 1479
PdiI GCCGGC 1 cut(s) 1020
PdmI GAANNNNTTC 1 cut(s) 774
PfeI GAWTC 6 cut(s) 473, 499, 527, 1370, 1392, 1772
PflMI CCANNNNNTGG 1 cut(s) 797
PkrI GCNGC 8 cut(s) 21, 153, 195, 241, 271, 481, 719, 1135
PleI GAGTC 3 cut(s) 1694, 1732, 1805
PpsI GAGTC 3 cut(s) 1694, 1732, 1805
PshBI ATTAAT 1 cut(s) 1821
Psp124BI GAGCTC 1 cut(s) 623
Psp1406I AACGTT 1 cut(s) 879
Psp6I CCWGG 4 cut(s) 120, 252, 1365, 1573
PspEI GGTNACC 1 cut(s) 1117
PspFI CCCAGC 2 cut(s) 125, 790
PspGI CCWGG 4 cut(s) 120, 252, 1365, 1573
PspN4I GGNNCC 2 cut(s) 185, 1627
PspPI GGNCC 2 cut(s) 1103, 1651
PstI CTGCAG 3 cut(s) 156, 481, 1135
PstNI CAGNNNCTG 1 cut(s) 1395
PsuI RGATCY 2 cut(s) 1625, 1747
PvuII CAGCTG 1 cut(s) 1422
RsaI GTAC 6 cut(s) 236, 401, 455, 732, 808, 1331
RsaNI GTAC 6 cut(s) 235, 400, 454, 731, 807, 1330
SacI GAGCTC 1 cut(s) 623
SapI GCTCTTC 1 cut(s) 1475
SaqAI TTAA 8 cut(s) 288, 426, 576, 588, 782, 975, 1109, 1821
SatI GCNGC 8 cut(s) 20, 152, 194, 240, 270, 480, 718, 1134
Sau3AI GATC 4 cut(s) 686, 924, 1625, 1747
Sau96I GGNCC 2 cut(s) 1103, 1651
SchI GAGTC 3 cut(s) 1695, 1733, 1805
ScrFI CCNGG 5 cut(s) 122, 254, 510, 1367, 1575
SduI GDGCHC 1 cut(s) 623
SexAI ACCWGGT 1 cut(s) 1573
SfaNI GCATC 3 cut(s) 348, 625, 738
SfcI CTRYAG 4 cut(s) 152, 477, 1131, 1756
SmlI CTYRAG 5 cut(s) 408, 622, 652, 1191, 1630
SmoI CTYRAG 5 cut(s) 408, 622, 652, 1191, 1630
SpeI ACTAGT 1 cut(s) 1664
SspI AATATT 1 cut(s) 1099
SspMI CTAG 2 cut(s) 336, 1665
SstI GAGCTC 1 cut(s) 623
StyD4I CCNGG 5 cut(s) 120, 252, 508, 1365, 1573
StyI CCWWGG 2 cut(s) 42, 1728
TaaI ACNGT 1 cut(s) 547
TaiI ACGT 3 cut(s) 401, 882, 1029
TaqI TCGA 6 cut(s) 201, 617, 689, 820, 916, 927
TatI WGTACW 2 cut(s) 730, 1329
TauI GCSGC 3 cut(s) 22, 242, 272
TfiI GAWTC 6 cut(s) 473, 499, 527, 1370, 1392, 1772
Tru1I TTAA 8 cut(s) 288, 426, 576, 588, 782, 975, 1109, 1821
Tru9I TTAA 8 cut(s) 288, 426, 576, 588, 782, 975, 1109, 1821
TscAI CASTG 2 cut(s) 747, 769
TseFI GTSAC 3 cut(s) 73, 1117, 1497
TseI GCWGC 5 cut(s) 151, 193, 479, 717, 1133
Tsp45I GTSAC 3 cut(s) 73, 1117, 1497
TspDTI ATGAA 7 cut(s) 357, 716, 783, 983, 1106, 1202, 1215
TspRI CASTG 2 cut(s) 747, 769
Van91I CCANNNNNTGG 1 cut(s) 797
VspI ATTAAT 1 cut(s) 1821
XapI RAATTY 6 cut(s) 85, 678, 1001, 1209, 1272, 1794
XceI RCATGY 1 cut(s) 1489
XmiI GTMKAC 1 cut(s) 1805
XmnI GAANNNNTTC 1 cut(s) 774
XspI CTAG 2 cut(s) 336, 1665
Zsp2I ATGCAT 1 cut(s) 701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.