MD05G1208600.v1.1

Interactor of constitutive active ROPs

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
34028882 .. 34032695
3814 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1208600.v1.1.491

Sequence Viewer

Length: 1152 bp
ATGCTGCGATCAAGGGGCTCTGAAATGGTTCAAAGGCCGTCTCCTCGAGGCTCACATCAGCTCAGGACATCAAGCTCTGATTCAGATCCACTCCATCATCGACCAATAACTGATCGAAGTCCAAAGCTAGGAGGGGATCGCCGTTCCCCAAGAGGTACACAATCTGATCCACTAAACCAAAAGAAGATTGGAACCCGCCTTGCTGATTTGGAATCCCAACTTGGGCAAGCACAAGAAGAGCTAAAGATACTGAAAGAGCAGTTGGCTTCAGCCGAGGCTGCAAAGAAAGAAGCACAAGAGAAACTGGAAAATAAAACTAAGAAACGAGTTGTGACTTCTGAGCCAGTGATGATCCATGAAACGCATCCTCCATTGGAAAATCAGGACTCTAACAAAACGGACAGTTGTTCCTCTGATGAAGTTCCAGATGACATCCAAAAGGAAACCGATGTTTATGAAGTCCCAGTAGAAAAAGTTACAGTTGAGCCAAAGGTTGAACCCAGTGAGACTGATCAGGTGGAAGAAGAAACCAAACCAGTTGTTATATCAGATGAACCGCCATCAAATTTGGAAGCAGAGAAACTTACCGCCTTACGTGACCTAGCTTTGAAGAATGATGAGATAAACATGCTAAGAGCTGAGTTGGAAGAGAAGGCAAAGCAGCTAGAAGTGTTTGGTGAAGAAAATCAAGGTTTAAAGAATCAGCTAAACGAAGCAGCATTAAATATTTTATCTGCCCAAGAAAAGGAAAAGGAAATGTCCTTGAAGTTAAGTCAGCTAGAGGAAGAGCTGGAAGCAAGTAAGGCAAATGCAGGTCAGTTGAACGCAACGCTGCAGGCAACAGAAGGATCAAAGGAAGCGCTGGAAGCGGAAATAAAGAAGATGAGAGTGCAGACAGAGCAGTGGAGAAAGGCTGCAGATGCTGCTGCTGCAGTACTTGCCGGGGGTGTGGAGATGAATGGTAGGATTTCTGAGAGGTGTGGCTCCATGGATAAGCACTTTGGTGGAGTATTTGAGCCATCAGCTGGTGGCTATGCCGGCTTTGTGGGGTCACCTGCTGATGGCTTGGACGATGGGTTCGGTAGTGGTAAAAGAAAGGGTTCCGGCATAAAAATGTTTGGTGACTTGTGGAAAAAGAAGGGCCAGAGATAA

Protein Analysis

384

Amino Acids

42.06

Weight (kDa)

5.19

Isoelectric Point (pI)

52.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1063
AbsI CCTCGAGG 1 cut(s) 45
Acc36I ACCTGC 2 cut(s) 803, 1063
AccB7I CCANNNNNTGG 1 cut(s) 1025
AciI CCGC 4 cut(s) 196, 557, 588, 869
AclWI GGATC 5 cut(s) 80, 144, 161, 346, 856
AcsI RAATTY 1 cut(s) 565
AcuI CTGAAG 1 cut(s) 252
AfaI GTAC 2 cut(s) 157, 936
AfeI AGCGCT 1 cut(s) 861
AfiI CCNNNNNNNGG 5 cut(s) 128, 222, 745, 1025, 1061
AgsI TTSAA 5 cut(s) 32, 497, 610, 766, 823
AjuI GAANNNNNNNTTGG 4 cut(s) 204, 236, 245, 277
AleI CACNNNNGTG 1 cut(s) 1002
AloI GAACNNNNNNTCC 2 cut(s) 1061, 1093
Alw26I GTCTC 2 cut(s) 45, 500
AlwI GGATC 5 cut(s) 80, 144, 161, 346, 856
AlwNI CAGNNNCTG 1 cut(s) 923
Ama87I CYCGRG 1 cut(s) 45
Aor51HI AGCGCT 1 cut(s) 861
AoxI GGCC 2 cut(s) 35, 1141
ApeKI GCWGC 9 cut(s) 4, 278, 661, 716, 832, 914, 923, 926, 929
ApoI RAATTY 1 cut(s) 565
ArsI GACNNNNNNTTYG 2 cut(s) 1061, 1093
Asp700I GAANNNNTTC 2 cut(s) 27, 1099
AspLEI GCGC 1 cut(s) 862
AspS9I GGNCC 1 cut(s) 1141
AsuC2I CCSGG 1 cut(s) 943
AsuHPI GGTGA 3 cut(s) 689, 1044, 1133
AvaI CYCGRG 1 cut(s) 45
BanII GRGCYC 1 cut(s) 20
BbvI GCAGC 8 cut(s) 265, 673, 728, 819, 901, 910, 913, 916
BccI CCATC 5 cut(s) 102, 568, 1027, 1055, 1067
BceAI ACGGC 2 cut(s) 22, 126
BclI TGATCA 1 cut(s) 511
BcnI CCSGG 1 cut(s) 943
BcoDI GTCTC 2 cut(s) 45, 500
BfaI CTAG 4 cut(s) 128, 602, 665, 779
BfmI CTRYAG 3 cut(s) 833, 915, 930
BfoI RGCGCY 1 cut(s) 863
BfuAI ACCTGC 2 cut(s) 803, 1063
BisI GCNGC 9 cut(s) 5, 279, 662, 717, 833, 915, 924, 927, 930
BlsI GCNGC 9 cut(s) 6, 280, 663, 718, 834, 916, 925, 928, 931
BmcAI AGTACT 1 cut(s) 936
Bme1390I CCNGG 1 cut(s) 943
BmeT110I CYCGRG 1 cut(s) 45
BmgT120I GGNCC 1 cut(s) 1141
BmiI GGNNCC 3 cut(s) 193, 985, 1102
BmrFI CCNGG 1 cut(s) 943
BmrI ACTGGG 2 cut(s) 458, 495
BmsI GCATC 2 cut(s) 373, 910
BmuI ACTGGG 2 cut(s) 458, 495
Bpu10I CCTNAGC 1 cut(s) 62
BpuMI CCSGG 1 cut(s) 943
BsaAI YACGTR 1 cut(s) 596
BsaBI GATNNNNATC 1 cut(s) 84
BsaJI CCNNGG 3 cut(s) 273, 942, 987
BsaXI ACNNNNNCTCC 2 cut(s) 352, 382
Bsc4I CCNNNNNNNGG 5 cut(s) 128, 222, 745, 1025, 1061
Bse118I RCCGGY 1 cut(s) 1037
Bse1I ACTGG 5 cut(s) 309, 344, 464, 501, 536
Bse8I GATNNNNATC 1 cut(s) 84
BseDI CCNNGG 3 cut(s) 273, 942, 987
BseGI GGATG 2 cut(s) 364, 432
BseJI GATNNNNATC 1 cut(s) 84
BseLI CCNNNNNNNGG 5 cut(s) 128, 222, 745, 1025, 1061
BseMII CTCAG 4 cut(s) 76, 330, 630, 963
BseNI ACTGG 5 cut(s) 309, 344, 464, 501, 536
BseRI GAGGAG 1 cut(s) 33
BseXI GCAGC 8 cut(s) 265, 673, 728, 819, 901, 910, 913, 916
BsgI GTGCAG 1 cut(s) 911
BshFI GGCC 2 cut(s) 37, 1143
BsiHKCI CYCGRG 1 cut(s) 45
BsiSI CCGG 3 cut(s) 942, 1038, 1104
BslFI GGGAC 1 cut(s) 446
BslI CCNNNNNNNGG 5 cut(s) 128, 222, 745, 1025, 1061
BsmAI GTCTC 2 cut(s) 45, 500
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 1 cut(s) 446
BsnI GGCC 2 cut(s) 37, 1143
BsoBI CYCGRG 1 cut(s) 45
Bsp1286I GDGCHC 1 cut(s) 20
Bsp143I GATC 8 cut(s) 8, 85, 112, 136, 166, 351, 511, 848
Bsp19I CCATGG 1 cut(s) 987
BspACI CCGC 4 cut(s) 196, 557, 588, 869
BspANI GGCC 2 cut(s) 37, 1143
BspCNI CTCAG 4 cut(s) 75, 331, 631, 964
BspLI GGNNCC 3 cut(s) 193, 985, 1102
BspMAI CTGCAG 3 cut(s) 837, 919, 934
BspMI ACCTGC 2 cut(s) 803, 1063
BspPI GGATC 5 cut(s) 80, 144, 161, 346, 856
BspQI GCTCTTC 2 cut(s) 231, 780
BsrFI RCCGGY 1 cut(s) 1037
BsrI ACTGG 5 cut(s) 309, 344, 464, 501, 536
BssAI RCCGGY 1 cut(s) 1037
BssECI CCNNGG 3 cut(s) 273, 942, 987
BssMI GATC 8 cut(s) 8, 85, 112, 136, 166, 351, 511, 848
BssT1I CCWWGG 1 cut(s) 987
Bst4CI ACNGT 2 cut(s) 404, 481
Bst6I CTCTTC 3 cut(s) 231, 642, 780
BstAPI GCANNNNNTGC 2 cut(s) 923, 938
BstBAI YACGTR 1 cut(s) 596
BstC8I GCNNGC 3 cut(s) 228, 837, 1039
BstDEI CTNAG 6 cut(s) 62, 318, 339, 632, 639, 972
BstDSI CCRYGG 1 cut(s) 987
BstEII GGTNACC 1 cut(s) 1050
BstF5I GGATG 2 cut(s) 364, 432
BstH2I RGCGCY 1 cut(s) 863
BstHHI GCGC 1 cut(s) 862
BstKTI GATC 8 cut(s) 11, 88, 115, 139, 169, 354, 514, 851
BstMAI GTCTC 2 cut(s) 45, 500
BstMBI GATC 8 cut(s) 8, 85, 112, 136, 166, 351, 511, 848
BstMWI GCNNNNNNNGC 9 cut(s) 278, 803, 866, 898, 920, 923, 929, 938, 1038
BstNSI RCATGY 1 cut(s) 631
BstPI GGTNACC 1 cut(s) 1050
BstSCI CCNGG 1 cut(s) 941
BstSFI CTRYAG 3 cut(s) 833, 915, 930
BstV1I GCAGC 8 cut(s) 265, 673, 728, 819, 901, 910, 913, 916
BstX2I RGATCY 1 cut(s) 85
BstYI RGATCY 1 cut(s) 85
BsuRI GGCC 2 cut(s) 37, 1143
BtgI CCRYGG 1 cut(s) 987
BtsCI GGATG 2 cut(s) 364, 432
BtsI GCAGTG 1 cut(s) 908
BtsIMutI CAGTG 3 cut(s) 351, 508, 908
BveI ACCTGC 2 cut(s) 803, 1063
Cac8I GCNNGC 3 cut(s) 228, 837, 1039
CaiI CAGNNNCTG 1 cut(s) 923
CfoI GCGC 1 cut(s) 862
Cfr10I RCCGGY 1 cut(s) 1037
Cfr13I GGNCC 1 cut(s) 1141
Csp6I GTAC 2 cut(s) 156, 935
CviAII CATG 3 cut(s) 356, 628, 988
CviQI GTAC 2 cut(s) 156, 935
DdeI CTNAG 6 cut(s) 62, 318, 339, 632, 639, 972
DpnI GATC 8 cut(s) 10, 87, 114, 138, 168, 353, 513, 850
DpnII GATC 8 cut(s) 8, 85, 112, 136, 166, 351, 511, 848
DraI TTTAAA 1 cut(s) 696
Eam1104I CTCTTC 3 cut(s) 231, 642, 780
EarI CTCTTC 3 cut(s) 231, 642, 780
Eco130I CCWWGG 1 cut(s) 987
Eco24I GRGCYC 1 cut(s) 20
Eco47III AGCGCT 1 cut(s) 861
Eco57I CTGAAG 1 cut(s) 252
Eco88I CYCGRG 1 cut(s) 45
Eco91I GGTNACC 1 cut(s) 1050
EcoO65I GGTNACC 1 cut(s) 1050
EcoT14I CCWWGG 1 cut(s) 987
EcoT38I GRGCYC 1 cut(s) 20
ErhI CCWWGG 1 cut(s) 987
Esp3I CGTCTC 1 cut(s) 45
FaeI CATG 3 cut(s) 359, 631, 991
FaiI YATR 7 cut(s) 357, 456, 545, 629, 989, 1035, 1109
FaqI GGGAC 1 cut(s) 446
FatI CATG 3 cut(s) 355, 627, 987
FauI CCCGC 1 cut(s) 203
FbaI TGATCA 1 cut(s) 511
Fnu4HI GCNGC 9 cut(s) 5, 279, 662, 717, 833, 915, 924, 927, 930
FokI GGATG 2 cut(s) 351, 419
FriOI GRGCYC 1 cut(s) 20
Fsp4HI GCNGC 9 cut(s) 5, 279, 662, 717, 833, 915, 924, 927, 930
FspBI CTAG 4 cut(s) 128, 602, 665, 779
GlaI GCGC 1 cut(s) 861
GluI GCNGC 9 cut(s) 5, 279, 662, 717, 833, 915, 924, 927, 930
HaeII RGCGCY 1 cut(s) 863
HaeIII GGCC 2 cut(s) 37, 1143
HapII CCGG 3 cut(s) 942, 1038, 1104
HhaI GCGC 1 cut(s) 862
Hin1II CATG 3 cut(s) 359, 631, 991
Hin6I GCGC 1 cut(s) 860
HinP1I GCGC 1 cut(s) 860
HinfI GANTC 4 cut(s) 80, 212, 386, 700
HpaII CCGG 3 cut(s) 942, 1038, 1104
HphI GGTGA 3 cut(s) 689, 1044, 1133
Hpy166II GTNNAC 1 cut(s) 158
Hpy188I TCNGA 8 cut(s) 22, 79, 85, 166, 340, 415, 550, 973
Hpy188III TCNNGA 3 cut(s) 64, 383, 425
Hpy8I GTNNAC 1 cut(s) 158
HpyAV CCTTC 3 cut(s) 646, 839, 1132
HpyCH4III ACNGT 2 cut(s) 404, 481
HpyCH4IV ACGT 1 cut(s) 595
HpyCH4V TGCA 6 cut(s) 281, 812, 835, 892, 917, 932
HpyF10VI GCNNNNNNNGC 9 cut(s) 278, 803, 866, 898, 920, 923, 929, 938, 1038
HpyF3I CTNAG 6 cut(s) 62, 318, 339, 632, 639, 972
HpySE526I ACGT 1 cut(s) 595
Hsp92II CATG 3 cut(s) 359, 631, 991
HspAI GCGC 1 cut(s) 860
KroI GCCGGC 1 cut(s) 1037
KroNI GCCGGC 1 cut(s) 1039
Ksp22I TGATCA 1 cut(s) 511
Kzo9I GATC 8 cut(s) 8, 85, 112, 136, 166, 351, 511, 848
LguI GCTCTTC 2 cut(s) 231, 780
LmnI GCTCC 1 cut(s) 989
Lsp1109I GCAGC 8 cut(s) 265, 673, 728, 819, 901, 910, 913, 916
LweI GCATC 2 cut(s) 373, 910
MaeI CTAG 4 cut(s) 128, 602, 665, 779
MaeII ACGT 1 cut(s) 595
MaeIII GTNAC 5 cut(s) 331, 475, 596, 1050, 1121
MalI GATC 8 cut(s) 10, 87, 114, 138, 168, 353, 513, 850
MboI GATC 8 cut(s) 8, 85, 112, 136, 166, 351, 511, 848
MboII GAAGA 9 cut(s) 196, 248, 533, 536, 622, 659, 692, 797, 892
MflI RGATCY 1 cut(s) 85
MhlI GDGCHC 1 cut(s) 20
MluCI AATT 1 cut(s) 565
MlyI GAGTC 1 cut(s) 380
MmeI TCCRAC 1 cut(s) 624
MnlI CCTC 9 cut(s) 41, 54, 125, 146, 268, 378, 421, 775, 969
MroNI GCCGGC 1 cut(s) 1037
MroXI GAANNNNTTC 2 cut(s) 27, 1099
MseI TTAA 3 cut(s) 695, 722, 770
MslI CAYNNNNRTG 2 cut(s) 1002, 1112
MspA1I CMGCKG 1 cut(s) 1025
MspI CCGG 3 cut(s) 942, 1038, 1104
MspR9I CCNGG 1 cut(s) 943
MwoI GCNNNNNNNGC 9 cut(s) 278, 803, 866, 898, 920, 923, 929, 938, 1038
NaeI GCCGGC 1 cut(s) 1039
NciI CCSGG 1 cut(s) 943
NcoI CCATGG 1 cut(s) 987
NdeII GATC 8 cut(s) 8, 85, 112, 136, 166, 351, 511, 848
NgoMIV GCCGGC 1 cut(s) 1037
NlaIII CATG 3 cut(s) 359, 631, 991
NlaIV GGNNCC 3 cut(s) 193, 985, 1102
NmeAIII GCCGAG 1 cut(s) 298
NmuCI GTSAC 4 cut(s) 331, 596, 1050, 1121
NspI RCATGY 1 cut(s) 631
OliI CACNNNNGTG 1 cut(s) 1002
PaeR7I CTCGAG 1 cut(s) 45
PaqCI CACCTGC 1 cut(s) 1063
PciSI GCTCTTC 2 cut(s) 231, 780
PdiI GCCGGC 1 cut(s) 1039
PdmI GAANNNNTTC 2 cut(s) 27, 1099
PfeI GAWTC 3 cut(s) 80, 212, 700
PflMI CCANNNNNTGG 1 cut(s) 1025
PkrI GCNGC 9 cut(s) 6, 280, 663, 718, 834, 916, 925, 928, 931
PleI GAGTC 1 cut(s) 380
PpsI GAGTC 1 cut(s) 380
Ppu21I YACGTR 1 cut(s) 596
PspEI GGTNACC 1 cut(s) 1050
PspN4I GGNNCC 3 cut(s) 193, 985, 1102
PspPI GGNCC 1 cut(s) 1141
PspXI VCTCGAGB 1 cut(s) 45
PstI CTGCAG 3 cut(s) 837, 919, 934
PstNI CAGNNNCTG 1 cut(s) 923
PsuI RGATCY 1 cut(s) 85
PvuII CAGCTG 1 cut(s) 1025
RsaI GTAC 2 cut(s) 157, 936
RsaNI GTAC 2 cut(s) 156, 935
RseI CAYNNNNRTG 2 cut(s) 1002, 1112
SapI GCTCTTC 2 cut(s) 231, 780
SaqAI TTAA 3 cut(s) 695, 722, 770
SatI GCNGC 9 cut(s) 5, 279, 662, 717, 833, 915, 924, 927, 930
Sau3AI GATC 8 cut(s) 8, 85, 112, 136, 166, 351, 511, 848
Sau96I GGNCC 1 cut(s) 1141
ScaI AGTACT 1 cut(s) 936
SchI GAGTC 1 cut(s) 380
ScrFI CCNGG 1 cut(s) 943
SduI GDGCHC 1 cut(s) 20
SfaNI GCATC 2 cut(s) 373, 910
SfcI CTRYAG 3 cut(s) 833, 915, 930
Sfr274I CTCGAG 1 cut(s) 45
SlaI CTCGAG 1 cut(s) 45
SmiMI CAYNNNNRTG 2 cut(s) 1002, 1112
SmlI CTYRAG 1 cut(s) 45
SmoI CTYRAG 1 cut(s) 45
Sse9I AATT 1 cut(s) 565
SsiI CCGC 4 cut(s) 196, 557, 588, 869
SspI AATATT 1 cut(s) 727
SspMI CTAG 4 cut(s) 128, 602, 665, 779
StyD4I CCNGG 1 cut(s) 941
StyI CCWWGG 1 cut(s) 987
TaaI ACNGT 2 cut(s) 404, 481
TaiI ACGT 1 cut(s) 598
TaqI TCGA 3 cut(s) 46, 100, 115
TasI AATT 1 cut(s) 565
TatI WGTACW 1 cut(s) 934
TfiI GAWTC 3 cut(s) 80, 212, 700
Tru1I TTAA 3 cut(s) 695, 722, 770
Tru9I TTAA 3 cut(s) 695, 722, 770
TscAI CASTG 3 cut(s) 351, 508, 908
TseFI GTSAC 4 cut(s) 331, 596, 1050, 1121
TseI GCWGC 9 cut(s) 4, 278, 661, 716, 832, 914, 923, 926, 929
Tsp45I GTSAC 4 cut(s) 331, 596, 1050, 1121
TspDTI ATGAA 5 cut(s) 372, 432, 471, 567, 971
TspGWI ACGGA 1 cut(s) 413
TspRI CASTG 3 cut(s) 351, 508, 908
Van91I CCANNNNNTGG 1 cut(s) 1025
XapI RAATTY 1 cut(s) 565
XceI RCATGY 1 cut(s) 631
XcmI CCANNNNNNNNNTGG 1 cut(s) 185
XhoI CTCGAG 1 cut(s) 45
XmnI GAANNNNTTC 2 cut(s) 27, 1099
XspI CTAG 4 cut(s) 128, 602, 665, 779
ZrmI AGTACT 1 cut(s) 936
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.